view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PARD3B_chr2_204540475_205625162 | 205057325 | TATGTATA others(92): Show |
T | intron_variant | MODIFIER | NA19240.hp1 | a0004 | a0004c0026 | a0004c0026t0004 | a0004c0026t0004g0041 | 1 | 45 | 0.0222 | -99 | c.504 others(116): Show |
PARD3B | ENSG00000116117.20 | transcript | ENST00000406610.7 | protein_coding | 4/22 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
PCGF3_chr4_700832_775089 | 731949 | CCCCTCCC others(92): Show |
C | intron_variant | MODIFIER | HG00733.hp2 | a0002 | a0002c0002 | a0002c0002t0045 | a0002c0002t0045g0009 | 1 | 364 | 0.0027 | -99 | c.-10 others(114): Show |
PCGF3 | ENSG00000185619.19 | transcript | ENST00000362003.10 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
PCSK6_chr15_101298933_101494707 | 101334169 | CGACACAG others(92): Show |
C | intron_variant | MODIFIER | HG00323.hp2 HG00639.hp1 HG00733.hp1 others(40): Show |
a0001a0002a0009others(2): Show | a0001c0001a0001c0002a0001c0003others(17): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(20): Show | a0001c0001t0001g0177 a0001c0001t0001g0208 a0001c0001t0001g0260 others(40): Show |
43 | 234 | 0.1838 | -99 | c.185 others(118): Show |
PCSK6 | ENSG00000140479.18 | transcript | ENST00000611716.5 | protein_coding | 13/21 | chr15 | TogoVar | |||||||
PERM1_chr1_970198_987093 | 977494 | TCCCGCTC others(92): Show |
T | intron_variant | MODIFIER | NA19011.hp1 | a0004 | a0004c0004 | a0004c0004t0002 | a0004c0004t0002g0163 | 1 | 385 | 0.0026 | -99 | c.215 others(116): Show |
PERM1 | ENSG00000187642.10 | transcript | ENST00000433179.4 | protein_coding | 2/3 | chr1 | TogoVar | |||||||
PIGN_chr18_62036164_62192056 | 62040069 | GCCCCATC others(92): Show |
G | downstream_gene_variant | MODIFIER | HG00323.hp1 | a0001 | a0001c0019 | a0001c0019t0001 | a0001c0019t0001g0190 | 1 | 339 | 0.0029 | -99 | c.*56 others(110): Show |
PIGN | ENSG00000197563.11 | transcript | ENST00000640252.2 | protein_coding | 1094 | chr18 | TogoVar | |||||||
PIK3R5_chr17_8873916_8970707 | 8885604 | CCTAGGTA others(92): Show |
C | intron_variant | MODIFIER | HG02572.hp2 HG02647.hp1 NA18522.hp2 |
a0001 | a0001c0004 | a0001c0004t0001a0001c0004t0011 | a0001c0004t0001g0093 a0001c0004t0001g0217 a0001c0004t0011g0260 |
3 | 296 | 0.0101 | -99 | c.212 others(116): Show |
PIK3R5 | ENSG00000141506.15 | transcript | ENST00000447110.6 | protein_coding | 14/18 | chr17 | TogoVar | |||||||
PIKFYVE_chr2_208261255_208363746 | 208360073 | ATTTTTAA others(92): Show |
A | downstream_gene_variant | MODIFIER | HG00738.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 286 | 0.0035 | -99 | c.*47 others(110): Show |
PIKFYVE | ENSG00000115020.17 | transcript | ENST00000264380.9 | protein_coding | 1328 | chr2 | TogoVar | |||||||
PKD2L1_chr10_100283149_100335228 | 100314965 | AGGAAGGA others(92): Show |
A | intron_variant | MODIFIER | NA18991.hp1 NA19000.hp1 NA19002.hp2 others(1): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0109 a0002c0003t0001g0110 a0002c0003t0001g0154 others(1): Show |
4 | 253 | 0.0158 | -99 | c.349 others(118): Show |
PKD2L1 | ENSG00000107593.17 | transcript | ENST00000318222.4 | protein_coding | 2/15 | chr10 | TogoVar | |||||||
PLCXD1_chrX_276381_308356 | 297034 | TGGGGATT others(92): Show |
T | intron_variant | MODIFIER | HG01168.hp2 NA18992.hp1 NA19060.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0015a0001c0001t0070a0001c0003t0059 | a0001c0001t0015g0055 a0001c0001t0070g0152 a0001c0003t0059g0050 |
3 | 107 | 0.0280 | -99 | c.734 others(116): Show |
PLCXD1 | ENSG00000182378.15 | transcript | ENST00000381657.8 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
PLEKHN1_chr1_961482_980865 | 977494 | TCCCGCTC others(92): Show |
T | downstream_gene_variant | MODIFIER | NA19011.hp1 | a0004 | a0004c0004 | a0004c0004t0008 | a0004c0004t0008g0107 | 1 | 397 | 0.0025 | -99 | c.*29 others(110): Show |
PLEKHN1 | ENSG00000187583.11 | transcript | ENST00000379410.8 | protein_coding | 1630 | chr1 | TogoVar | |||||||
PLIN4_chr19_4497192_4523486 | 4512884 | GTGGTGTC others(92): Show |
G | disruptive_inframe_deletion | MODERATE | HG00423.hp2 HG00741.hp2 HG01074.hp1 others(39): Show |
a0001a0007a0010others(2): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0002t0001others(10): Show | a0001c0001t0002g0004 a0001c0001t0002g0008 a0001c0001t0002g0009 others(26): Show |
42 | 409 | 0.1027 | -99 | c.977 others(107): Show |
p.Ser others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 1194/6502 | 977/4116 | 326/1371 | chr19 | TogoVar | |||
PPP2R2C_chr4_6315581_6477614 | 6353775 | AACACCGA others(92): Show |
A | intron_variant | MODIFIER | HG00733.hp1 HG00735.hp2 HG01069.hp2 others(60): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(19): Show | a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0030 others(60): Show |
63 | 294 | 0.2143 | -99 | c.626 others(116): Show |
PPP2R2C | ENSG00000074211.14 | transcript | ENST00000382599.9 | protein_coding | 5/8 | chr4 | TogoVar | |||||||
PPP2R2C_chr4_6315581_6477614 | 6353824 | AACACCGA others(92): Show |
A | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0190 | 1 | 296 | 0.0034 | -99 | c.626 others(116): Show |
PPP2R2C | ENSG00000074211.14 | transcript | ENST00000382599.9 | protein_coding | 5/8 | chr4 | TogoVar | |||||||
PPP2R5C_chr14_101756709_101932977 | 101782325 | CTCCCCCT others(92): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG02717.hp1 HG02886.hp1 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0001t0007a0001c0003t0002 | a0001c0001t0002g0124 a0001c0001t0002g0127 a0001c0001t0007g0126 others(2): Show |
5 | 136 | 0.0368 | -99 | c.94- others(114): Show |
PPP2R5C | ENSG00000078304.20 | transcript | ENST00000694906.1 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
PRKCA_chr17_66297613_66815743 | 66798540 | CGGTGGTG others(92): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG02922.hp1 |
a0001 | a0001c0002 | a0001c0002t0021a0001c0002t0026 | a0001c0002t0021g0115 a0001c0002t0026g0123 |
2 | 93 | 0.0215 | -99 | c.185 others(118): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
PRKCA_chr17_66297613_66815743 | 66798611 | GTGGTGGT others(92): Show |
G | intron_variant | MODIFIER | HG03831.hp1 | a0001 | a0001c0001 | a0001c0001t0023 | a0001c0001t0023g0094 | 1 | 167 | 0.0060 | -99 | c.185 others(118): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
PRKG1_chr10_51069487_52303350 | 51392855 | GGGGCTGA others(92): Show |
G | intron_variant | MODIFIER | HG02622.hp1 HG02976.hp1 NA19240.hp2 |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0002t0006a0001c0006t0007 | a0001c0001t0001g0019 a0001c0002t0006g0024 a0001c0006t0007g0050 |
3 | 64 | 0.0469 | -99 | c.479 others(118): Show |
PRKG1 | ENSG00000185532.20 | transcript | ENST00000373980.11 | protein_coding | 2/17 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PTPN12_chr7_77532295_77645069 | 77533682 | GGGGCGGC others(92): Show |
G | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01891.hp1 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 |
3 | 305 | 0.0098 | -99 | c.-38 others(110): Show |
PTPN12 | ENSG00000127947.16 | transcript | ENST00000248594.11 | protein_coding | 3612 | chr7 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42508973 | TATATAAT others(92): Show |
T | intron_variant | MODIFIER | HG01261.hp2 NA19240.hp2 NA21309.hp1 |
a0002a0004a0006 | a0002c0016a0004c0006a0006c0010 | a0002c0016t0030a0004c0006t0008a0006c0010t0009 | a0002c0016t0030g0014 a0004c0006t0008g0054 a0006c0010t0009g0021 |
3 | 62 | 0.0484 | -99 | c.115 others(120): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42509072 | CATATAAT others(92): Show |
C | intron_variant | MODIFIER | HG01257.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0011 | 1 | 35 | 0.0286 | -99 | c.115 others(120): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PUM1_chr1_30926506_31070717 | 30972285 | AGGGGAGG others(92): Show |
A | intron_variant | MODIFIER | HG02083.hp1 HG02135.hp2 |
a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0298 a0001c0002t0008g0309 |
2 | 328 | 0.0061 | -99 | c.150 others(118): Show |
PUM1 | ENSG00000134644.16 | transcript | ENST00000426105.7 | protein_coding | 10/21 | chr1 | TogoVar | |||||||
PUS7_chr7_105451503_105527271 | 105504137 | TCGGCTCA others(92): Show |
T | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp2 HG01175.hp2 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0016 | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 others(30): Show |
33 | 348 | 0.0948 | -99 | c.586 others(116): Show |
PUS7 | ENSG00000091127.14 | transcript | ENST00000469408.6 | protein_coding | 4/15 | chr7 | TogoVar | |||||||
PXMP2_chr12_132682587_132709985 | 132692299 | TGCCAGTT others(92): Show |
T | intron_variant | MODIFIER | HG02145.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0046 | 1 | 348 | 0.0029 | -99 | c.236 others(116): Show |
PXMP2 | ENSG00000176894.10 | transcript | ENST00000317479.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
PXMP2_chr12_132682587_132709985 | 132692382 | GTTAGTGA others(92): Show |
G | intron_variant | MODIFIER | HG00438.hp1 HG00642.hp1 HG00735.hp1 others(82): Show |
a0001a0002a0004 | a0001c0002a0001c0004a0002c0006others(1): Show | a0001c0002t0002a0001c0002t0006a0001c0004t0002others(2): Show | a0001c0002t0002g0002 a0001c0002t0002g0004 a0001c0002t0002g0028 others(39): Show |
85 | 348 | 0.2443 | -99 | c.236 others(116): Show |
PXMP2 | ENSG00000176894.10 | transcript | ENST00000317479.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
RAB3C_chr5_58578075_58864394 | 58596632 | TATATAAA others(92): Show |
T | intron_variant | MODIFIER | HG02615.hp2 HG03130.hp2 |
a0001 | a0001c0001 | a0001c0001t0045a0001c0001t0075 | a0001c0001t0045g0133 a0001c0001t0075g0135 |
2 | 218 | 0.0092 | -99 | c.24+ others(116): Show |
RAB3C | ENSG00000152932.8 | transcript | ENST00000282878.6 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
RAB3C_chr5_58578075_58864394 | 58597820 | TACGATAA others(92): Show |
T | intron_variant | MODIFIER | HG02622.hp2 HG02717.hp2 HG02965.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006 | a0001c0001t0002g0002 a0001c0001t0006g0001 a0001c0001t0006g0003 |
3 | 204 | 0.0147 | -99 | c.24+ others(116): Show |
RAB3C | ENSG00000152932.8 | transcript | ENST00000282878.6 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
RANBP17_chr5_170857018_171305015 | 170955595 | TATATATA others(92): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG02055.hp1 HG02559.hp2 others(4): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0003 | a0001c0002t0002g0002 a0001c0002t0002g0003 a0001c0002t0003g0008 others(4): Show |
7 | 192 | 0.0365 | -99 | c.157 others(118): Show |
RANBP17 | ENSG00000204764.14 | transcript | ENST00000523189.6 | protein_coding | 13/27 | chr5 | TogoVar | |||||||
RAP1GAP2_chr17_2791438_3042741 | 3000382 | ATGGGGCT others(92): Show |
A | intron_variant | MODIFIER | HG02630.hp2 HG02698.hp1 HG03688.hp1 others(2): Show |
a0001a0002a0003 | a0001c0002a0001c0004a0002c0008others(1): Show | a0001c0002t0003a0001c0002t0116a0001c0004t0009others(2): Show | a0001c0002t0003g0144 a0001c0002t0116g0214 a0001c0004t0009g0127 others(2): Show |
5 | 160 | 0.0313 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3000682 | AGGCTGGT others(92): Show |
A | intron_variant | MODIFIER | HG03669.hp2 | a0001 | a0001c0005 | a0001c0005t0011 | a0001c0005t0011g0022 | 1 | 210 | 0.0048 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3000701 | TATCAGCC others(92): Show |
T | intron_variant | MODIFIER | HG02723.hp1 | a0002 | a0002c0011 | a0002c0011t0002 | a0002c0011t0002g0017 | 1 | 192 | 0.0052 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001034 | ACAGAAGA others(92): Show |
A | intron_variant | MODIFIER | HG02683.hp2 | a0002 | a0002c0003 | a0002c0003t0107 | a0002c0003t0107g0066 | 1 | 215 | 0.0047 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001163 | ACCAGGCT others(92): Show |
A | intron_variant | MODIFIER | HG02723.hp1 HG04115.hp2 NA18612.hp2 |
a0001a0002 | a0001c0007a0002c0003a0002c0011 | a0001c0007t0012a0002c0003t0001a0002c0011t0002 | a0001c0007t0012g0179 a0002c0003t0001g0192 a0002c0011t0002g0017 |
3 | 186 | 0.0161 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001262 | TCCAGGCT others(92): Show |
T | intron_variant | MODIFIER | HG01081.hp2 HG01515.hp1 HG02258.hp2 others(1): Show |
a0001 | a0001c0001a0001c0004a0001c0010 | a0001c0001t0050a0001c0001t0053a0001c0004t0027others(1): Show | a0001c0001t0050g0121 a0001c0001t0053g0069 a0001c0004t0027g0092 others(1): Show |
4 | 177 | 0.0226 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001295 | TATCAGCC others(92): Show |
T | intron_variant | MODIFIER | HG00733.hp2 HG02615.hp1 HG02886.hp2 |
a0001 | a0001c0002a0001c0009 | a0001c0002t0001a0001c0002t0004a0001c0009t0137 | a0001c0002t0001g0019 a0001c0002t0004g0168 a0001c0009t0137g0016 |
3 | 178 | 0.0169 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001394 | AATCAGCC others(92): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG01070.hp1 HG01071.hp1 others(27): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(9): Show | a0001c0001t0013a0001c0001t0134a0001c0002t0001others(25): Show | a0001c0001t0013g0193 a0001c0001t0134g0068 a0001c0002t0001g0046 others(27): Show |
30 | 180 | 0.1667 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RAP1GAP2_chr17_2791438_3042741 | 3001530 | CAGAAGAA others(92): Show |
C | intron_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0009 | a0001c0009t0111 | a0001c0009t0111g0074 | 1 | 211 | 0.0047 | -99 | c.120 others(118): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RBM19_chr12_113817057_113971325 | 113836897 | TACACACC others(92): Show |
T | intron_variant | MODIFIER | HG03942.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0155 | 1 | 351 | 0.0028 | -99 | c.278 others(118): Show |
RBM19 | ENSG00000122965.11 | transcript | ENST00000261741.10 | protein_coding | 23/23 | chr12 | TogoVar | |||||||
RBM26_chr13_79313868_79411255 | 79392064 | GTATTATA others(92): Show |
G | intron_variant | MODIFIER | HG01358.hp2 HG03490.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0240 a0001c0002t0001g0241 |
2 | 326 | 0.0061 | -99 | c.72- others(116): Show |
RBM26 | ENSG00000139746.16 | transcript | ENST00000438737.3 | protein_coding | 1/21 | chr13 | TogoVar | |||||||
RIPOR3_chr20_50581108_50696542 | 50610024 | TGCCTCAC others(92): Show |
T | intron_variant | MODIFIER | HG03041.hp2 | a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0088 | 1 | 278 | 0.0036 | -99 | c.427 others(114): Show |
RIPOR3 | ENSG00000042062.13 | transcript | ENST00000327979.8 | protein_coding | 6/21 | chr20 | TogoVar | |||||||
RNASE10_chr14_20500537_20518884 | 20506665 | TGGGGGGT others(92): Show |
T | intron_variant | MODIFIER | NA18951.hp2 NA18953.hp2 NA19009.hp2 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0009 a0001c0001t0006g0165 |
3 | 366 | 0.0082 | -99 | c.-6+ others(112): Show |
RNASE10 | ENSG00000182545.7 | transcript | ENST00000430083.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
RNF213_chr17_80255852_80403794 | 80314242 | AGGTACTG others(92): Show |
A | intron_variant | MODIFIER | NA18990.hp2 | a0003 | a0003c0005 | a0003c0005t0006 | a0003c0005t0006g0274 | 1 | 290 | 0.0034 | -99 | c.281 others(118): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 15/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 215929 | AGGCTCTG others(92): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp2 others(53): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0009 a0001c0001t0001g0024 a0001c0001t0001g0027 others(53): Show |
56 | 126 | 0.4444 | -99 | c.728 others(114): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 8/9 | chr17 | TogoVar | |||||||
SCGB1C2_chr17_132569_144067 | 136282 | CCCCTAAC others(92): Show |
C | upstream_gene_variant | MODIFIER | HG01975.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 | 1 | 401 | 0.0025 | -99 | c.-13 others(110): Show |
SCGB1C2 | ENSG00000268320.4 | transcript | ENST00000595228.4 | protein_coding | 1286 | chr17 | TogoVar | |||||||
SENP1_chr12_48037897_48111079 | 48056686 | AATATATT others(92): Show |
A | intron_variant | MODIFIER | HG00423.hp2 HG01243.hp2 HG02015.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0032 a0001c0001t0001g0054 a0001c0001t0001g0095 others(12): Show |
15 | 392 | 0.0383 | -99 | c.140 others(118): Show |
SENP1 | ENSG00000079387.15 | transcript | ENST00000549518.6 | protein_coding | 13/17 | chr12 | TogoVar | |||||||
SGSM2_chr17_2332501_2386054 | 2355387 | TGGGGCAG others(92): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00597.hp1 others(18): Show |
a0001a0025 | a0001c0001a0001c0028a0025c0027 | a0001c0001t0001a0001c0028t0001a0025c0027t0001 | a0001c0001t0001g0012 a0001c0001t0001g0080 a0001c0001t0001g0148 others(17): Show |
21 | 297 | 0.0707 | -99 | c.134 others(116): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356366 | GGGGTGTA others(92): Show |
G | intron_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0037 | a0001c0037t0001 | a0001c0037t0001g0213 | 1 | 360 | 0.0028 | -99 | c.134 others(116): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356775 | GTTGGGGG others(92): Show |
G | intron_variant | MODIFIER | HG00408.hp1 NA19002.hp2 |
a0001 | a0001c0001a0001c0037 | a0001c0001t0001a0001c0037t0001 | a0001c0001t0001g0194 a0001c0037t0001g0213 |
2 | 420 | 0.0048 | -99 | c.134 others(116): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SH3TC2_chr5_148977150_149068062 | 149006278 | AAAAAAAG others(92): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00558.hp2 others(78): Show |
a0001a0003a0006others(2): Show | a0001c0002a0001c0007a0001c0021others(4): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0008others(50): Show | a0001c0002t0003g0003 a0001c0002t0003g0009 a0001c0002t0003g0054 others(64): Show |
81 | 324 | 0.2500 | -99 | c.367 others(116): Show |
SH3TC2 | ENSG00000169247.14 | transcript | ENST00000515425.6 | protein_coding | 16/16 | chr5 | TogoVar | |||||||
SLC12A7_chr5_1045384_1117063 | 1063667 | GCCACAGC others(92): Show |
G | intron_variant | MODIFIER | NA18984.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0049 | 1 | 117 | 0.0085 | -99 | c.273 others(115): Show |
SLC12A7 | ENSG00000113504.21 | transcript | ENST00000264930.10 | protein_coding | 20/23 | chr5 | TogoVar | |||||||
SLC13A3_chr20_46552828_46656459 | 46656268 | GTACAGTA others(92): Show |
G | upstream_gene_variant | MODIFIER | HG02135.hp2 HG02922.hp1 HG02922.hp2 others(9): Show |
a0001a0003 | a0001c0002a0001c0004a0001c0005others(2): Show | a0001c0002t0002a0001c0002t0004a0001c0004t0001others(4): Show | a0001c0002t0002g0053 a0001c0002t0002g0058 a0001c0002t0002g0060 others(9): Show |
12 | 320 | 0.0375 | -99 | c.-49 others(110): Show |
SLC13A3 | ENSG00000158296.14 | transcript | ENST00000279027.9 | protein_coding | 4810 | chr20 | TogoVar |