regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C7orf50_chr7_992006_1143247 | 1116477 | AGGACCAG others(493): Show |
A | intron_variant | MODIFIER | HG03209.hp2 HG03540.hp2 NA18906.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0007a0001c0001t0008 | a0001c0001t0003g0293a0001c0001t0007g0150a0001c0001t0008g0151 | 3 | 326 | 0.0092 | -500 | c.129 others(19): Show |
C7orf50 | ENSG00000146540.15 | transcript | ENST00000397098.8 | protein_coding | 2/4 | chr7 | TogoVar | ||||||
CD38_chr4_15773328_15858232 | 15791262 | CCCCTCTG others(493): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG00735.hp1 others(33): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0007others(15): Show | a0001c0001t0002g0008a0001c0001t0002g0181a0001c0001t0002g0188others(32): Show | 36 | 344 | 0.1047 | -500 | c.233 others(19): Show |
CD38 | ENSG00000004468.13 | transcript | ENST00000226279.8 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CDH4_chr20_61247261_61945617 | 61783771 | CGGGACAG others(493): Show |
C | intron_variant | MODIFIER | HG02055.hp1 | a0001 | a0001c0006 | a0001c0006t0021 | a0001c0006t0021g0004 | 1 | 106 | 0.0094 | -500 | c.576 others(19): Show |
CDH4 | ENSG00000179242.16 | transcript | ENST00000614565.5 | protein_coding | 4/15 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
CROCC2_chr2_240901336_240998311 | 240907825 | CCTCTACC others(493): Show |
C | intron_variant | MODIFIER | HG00558.hp2 HG00741.hp1 HG01070.hp1 others(61): Show |
a0001a0002a0003others(17): Show | a0001c0001a0001c0020a0001c0060others(22): Show | a0001c0001t0001a0001c0001t0003a0001c0020t0001others(25): Show | a0001c0001t0001g0126a0001c0001t0001g0127a0001c0001t0001g0128others(59): Show | 64 | 350 | 0.1829 | -500 | c.78+ others(15): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 1/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CYP4F11_chr19_15907377_15939529 | 15931529 | GGAATGAG others(493): Show |
G | intron_variant | MODIFIER | HG03704.hp2 | a0001 | a0001c0002 | a0001c0002t0133 | a0001c0002t0133g0297 | 1 | 386 | 0.0026 | -500 | c.198 others(17): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
CYP4F11_chr19_15907377_15939529 | 15931609 | GGAATGAG others(493): Show |
G | intron_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0008 | a0001c0008t0041 | a0001c0008t0041g0371 | 1 | 386 | 0.0026 | -500 | c.198 others(17): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
CYP4F11_chr19_15907377_15939529 | 15931681 | CGAGGAGA others(493): Show |
C | intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0004 | a0001c0004t0026 | a0001c0004t0026g0205 | 1 | 386 | 0.0026 | -500 | c.198 others(17): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
CYP4F11_chr19_15907377_15939529 | 15931821 | TGAGGAGA others(493): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG02109.hp1 HG03209.hp1 |
a0001 | a0001c0006 | a0001c0006t0040a0001c0006t0108 | a0001c0006t0040g0126a0001c0006t0040g0127a0001c0006t0108g0128 | 3 | 386 | 0.0078 | -500 | c.198 others(17): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
CYP4F11_chr19_15907377_15939529 | 15933309 | GGAATGAG others(493): Show |
G | intron_variant | MODIFIER | HG01952.hp2 NA18986.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0043 | a0001c0002t0001g0231a0001c0002t0043g0232 | 2 | 386 | 0.0052 | -500 | c.198 others(15): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
CYP4F11_chr19_15907377_15939529 | 15933429 | AGAATGAG others(493): Show |
A | intron_variant | MODIFIER | HG00609.hp2 HG01070.hp1 HG01993.hp1 others(13): Show |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0001a0001c0002t0003a0001c0002t0009others(7): Show | a0001c0002t0001g0270a0001c0002t0001g0277a0001c0002t0001g0293others(13): Show | 16 | 386 | 0.0415 | -500 | c.198 others(15): Show |
CYP4F11 | ENSG00000171903.17 | transcript | ENST00000402119.9 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
DIP2C_chr10_269201_694668 | 447770 | CGTCTATA others(493): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01099.hp2 HG02280.hp1 others(17): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(7): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0003others(10): Show | a0001c0001t0002g0004a0001c0001t0002g0025a0001c0002t0001g0061others(17): Show | 20 | 88 | 0.2273 | -500 | c.269 others(17): Show |
DIP2C | ENSG00000151240.18 | transcript | ENST00000280886.12 | protein_coding | 3/36 | chr10 | TogoVar | ||||||
DPH7_chr9_137549444_137583925 | 137565927 | CTCTGTCT others(493): Show |
C | intron_variant | MODIFIER | HG00558.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0095 | 1 | 340 | 0.0029 | -500 | c.641 others(16): Show |
DPH7 | ENSG00000148399.13 | transcript | ENST00000277540.7 | protein_coding | 5/8 | chr9 | TogoVar | ||||||
DPH7_chr9_137549444_137583925 | 137566806 | GGGGTGAC others(493): Show |
G | intron_variant | MODIFIER | HG02273.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0261 | 1 | 340 | 0.0029 | -500 | c.641 others(17): Show |
DPH7 | ENSG00000148399.13 | transcript | ENST00000277540.7 | protein_coding | 5/8 | chr9 | TogoVar | ||||||
FKRP_chr19_46741057_46763575 | 46763075 | TTTGGGAG others(493): Show |
T | downstream_gene_variant | MODIFIER | HG00609.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 | 1 | 430 | 0.0023 | -500 | c.*61 others(11): Show |
FKRP | ENSG00000181027.11 | transcript | ENST00000318584.10 | protein_coding | 4501 | chr19 | TogoVar | ||||||
HCN1_chr5_45249948_45701380 | 45526869 | TATCAGCT others(493): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00438.hp1 others(59): Show |
a0001 | a0001c0001a0001c0004a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(12): Show | a0001c0001t0001g0011a0001c0001t0001g0013a0001c0001t0001g0034others(59): Show | 62 | 226 | 0.2743 | -500 | c.850 others(19): Show |
HCN1 | ENSG00000164588.8 | transcript | ENST00000303230.6 | protein_coding | 2/7 | chr5 | TogoVar | ||||||
MLPH_chr2_237482251_237560322 | 237543300 | GGGGGACA others(493): Show |
G | intron_variant | MODIFIER | HG01496.hp2 HG02922.hp2 HG03225.hp1 others(2): Show |
a0008 | a0008c0009 | a0008c0009t0002 | a0008c0009t0002g0007a0008c0009t0002g0102a0008c0009t0002g0113others(2): Show | 5 | 286 | 0.0175 | -500 | c.153 others(18): Show |
MLPH | ENSG00000115648.14 | transcript | ENST00000264605.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
NEU4_chr2_241804193_241822413 | 241806918 | TCCCCCCT others(493): Show |
T | upstream_gene_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0013 | a0001c0013t0001 | a0001c0013t0001g0063 | 1 | 319 | 0.0031 | -500 | c.-23 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2274 | chr2 | TogoVar | ||||||
OTUD7A_chr15_31470398_31875673 | 31511095 | TATGTATA others(493): Show |
T | intron_variant | MODIFIER | HG02040.hp2 HG02132.hp2 HG02615.hp2 others(7): Show |
a0001a0002a0004 | a0001c0001a0002c0008a0004c0013 | a0001c0001t0002a0001c0001t0007a0001c0001t0054others(4): Show | a0001c0001t0002g0126a0001c0001t0002g0132a0001c0001t0002g0133others(7): Show | 10 | 244 | 0.0410 | -500 | c.894 others(17): Show |
OTUD7A | ENSG00000169918.10 | transcript | ENST00000307050.6 | protein_coding | 8/12 | chr15 | TogoVar | ||||||
SCUBE1_chr22_43192280_43348372 | 43280988 | AGTCACCC others(493): Show |
A | intron_variant | MODIFIER | HG03579.hp2 NA19030.hp2 |
a0001a0002 | a0001c0008a0002c0002 | a0001c0008t0020a0002c0002t0005 | a0001c0008t0020g0030a0002c0002t0005g0042 | 2 | 280 | 0.0071 | -500 | c.484 others(18): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | ||||||
SCUBE1_chr22_43192280_43348372 | 43280990 | TCACCCTG others(493): Show |
T | intron_variant | MODIFIER | HG02976.hp2 | a0001 | a0001c0051 | a0001c0051t0015 | a0001c0051t0015g0013 | 1 | 280 | 0.0036 | -500 | c.484 others(18): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | ||||||
SDHA_chr5_213320_262082 | 261582 | CCAGAGCA others(493): Show |
C | downstream_gene_variant | MODIFIER | HG02280.hp2 HG02647.hp2 HG03471.hp1 others(1): Show |
a0004 | a0004c0005 | a0004c0005t0004a0004c0005t0006 | a0004c0005t0004g0106a0004c0005t0006g0105a0004c0005t0006g0107others(1): Show | 4 | 266 | 0.0150 | -500 | c.*51 others(11): Show |
SDHA | ENSG00000073578.18 | transcript | ENST00000264932.11 | protein_coding | 4501 | chr5 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79921342 | GACAGGAA others(493): Show |
G | intron_variant | MODIFIER | HG02717.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0271 | 1 | 352 | 0.0028 | -500 | c.392 others(17): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 4/5 | chr18 | TogoVar | ||||||
STAT3_chr17_42308324_42393442 | 42337874 | AACTCCTT others(493): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG02451.hp2 HG02559.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004 | a0001c0001t0002g0005a0001c0001t0002g0009a0001c0001t0002g0014others(7): Show | 10 | 302 | 0.0331 | -500 | c.550 others(14): Show |
STAT3 | ENSG00000168610.17 | transcript | ENST00000264657.10 | protein_coding | 6/23 | chr17 | TogoVar | ||||||
STAT3_chr17_42308324_42393442 | 42337901 | TGACCTGA others(493): Show |
T | intron_variant | MODIFIER | HG02809.hp2 HG06807.hp1 |
a0001 | a0001c0003 | a0001c0003t0016 | a0001c0003t0016g0143a0001c0003t0016g0144 | 2 | 302 | 0.0066 | -500 | c.550 others(14): Show |
STAT3 | ENSG00000168610.17 | transcript | ENST00000264657.10 | protein_coding | 6/23 | chr17 | TogoVar | ||||||
STAT3_chr17_42308324_42393442 | 42338021 | GGACCTGA others(493): Show |
G | intron_variant | MODIFIER | HG03540.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0300 | 1 | 302 | 0.0033 | -500 | c.550 others(15): Show |
STAT3 | ENSG00000168610.17 | transcript | ENST00000264657.10 | protein_coding | 6/23 | chr17 | TogoVar |