regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHN1_chr2_174793809_175010381 | 174990262 | TGAGAGA | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(80): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0094a0001c0001t0001g0095a0001c0001t0001g0096others(80): Show | 83 | 276 | 0.3007 | -6 | c.19+ others(23): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 1/12 | chr2 | TogoVar | ||||||
CHN1_chr2_174793809_175010381 | 174991519 | ATGTAAC | A | intron_variant | MODIFIER | NA18943.hp1 NA18965.hp2 NA18995.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0016a0001c0001t0003g0017a0001c0001t0003g0018others(2): Show | 5 | 276 | 0.0181 | -6 | c.19+ others(23): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 1/12 | chr2 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29195627 | AGAGTGT | A | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00609.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0003a0001c0002t0004a0002c0003t0004others(2): Show | a0001c0001t0003g0200a0001c0001t0003g0204a0001c0002t0004g0199others(3): Show | 6 | 232 | 0.0259 | -6 | c.49+ others(19): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29204065 | CTCTGTG | C | intron_variant | MODIFIER | HG00140.hp1 HG00597.hp2 HG00609.hp2 others(31): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(14): Show | a0001c0001t0001g0005a0001c0001t0001g0029a0001c0001t0001g0076others(31): Show | 34 | 232 | 0.1466 | -6 | c.49+ others(21): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29204067 | CTGTGTG | C | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG00642.hp2 others(56): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(21): Show | a0001c0001t0001g0009a0001c0001t0001g0012a0001c0001t0001g0025others(56): Show | 59 | 232 | 0.2543 | -6 | c.49+ others(21): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29211450 | GCACACA | G | intron_variant | MODIFIER | HG01109.hp1 HG01109.hp2 HG02055.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0010others(9): Show | a0001c0001t0001g0015a0001c0002t0002g0002a0001c0002t0002g0078others(11): Show | 14 | 232 | 0.0603 | -6 | c.49+ others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29273343 | GTATATA | G | intron_variant | MODIFIER | HG03017.hp2 HG03834.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0008 | a0001c0001t0003g0057a0001c0001t0008g0139 | 2 | 232 | 0.0086 | -6 | c.49+ others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29273384 | TATATAC | T | intron_variant | MODIFIER | HG01928.hp1 HG02572.hp1 HG02818.hp2 others(1): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0002t0014a0001c0006t0022others(1): Show | a0001c0001t0001g0029a0001c0002t0014g0019a0001c0006t0022g0119others(1): Show | 4 | 232 | 0.0172 | -6 | c.49+ others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29295314 | AACACAC | A | intron_variant | MODIFIER | HG06807.hp2 NA19240.hp1 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0010a0001c0006t0002 | a0001c0001t0010g0125a0001c0006t0002g0198 | 2 | 232 | 0.0086 | -6 | c.50- others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29301342 | TACACAC | T | intron_variant | MODIFIER | HG00738.hp2 HG01167.hp2 HG01169.hp2 others(19): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(10): Show | a0001c0001t0001g0026a0001c0001t0001g0034a0001c0001t0001g0120others(19): Show | 22 | 232 | 0.0948 | -6 | c.50- others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29323837 | AATACAG | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(208): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(41): Show | a0001c0001t0001g0005a0001c0001t0001g0009a0001c0001t0001g0012others(208): Show | 211 | 232 | 0.9095 | -6 | c.50- others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29336759 | CAAAAAA | C | intron_variant | MODIFIER | HG02055.hp1 HG02486.hp2 HG02615.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004others(1): Show | a0001c0001t0012a0001c0002t0014a0001c0002t0026others(2): Show | a0001c0001t0012g0172a0001c0002t0014g0019a0001c0002t0026g0209others(2): Show | 5 | 232 | 0.0216 | -6 | c.50- others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29352363 | GTGTGTA | G | intron_variant | MODIFIER | HG01109.hp1 HG01192.hp2 HG01891.hp2 others(7): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0002t0002a0001c0005t0005others(2): Show | a0001c0001t0001g0015a0001c0001t0001g0103a0001c0001t0001g0120others(7): Show | 10 | 232 | 0.0431 | -6 | c.50- others(21): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29381809 | CAAAAAA | C | intron_variant | MODIFIER | HG00323.hp1 HG01069.hp1 HG01071.hp1 others(20): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0012others(12): Show | a0001c0001t0001g0064a0001c0001t0001g0076a0001c0001t0001g0166others(20): Show | 23 | 232 | 0.0991 | -6 | c.145 others(25): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29416784 | GTATGTA | G | intron_variant | MODIFIER | HG00639.hp2 HG00642.hp1 HG01081.hp1 others(30): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(14): Show | a0001c0001t0001g0015a0001c0001t0001g0025a0001c0001t0001g0026others(30): Show | 33 | 232 | 0.1422 | -6 | c.576 others(25): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29419631 | TCAACAA | T | intron_variant | MODIFIER | HG01175.hp1 HG01981.hp1 HG02647.hp1 others(2): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0225a0001c0001t0003g0143a0001c0001t0006g0039others(2): Show | 5 | 232 | 0.0216 | -6 | c.576 others(25): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29458377 | GCACACA | G | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp2 HG02572.hp2 others(1): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0003a0001c0002t0002a0001c0008t0011others(1): Show | a0001c0001t0003g0214a0001c0002t0002g0171a0001c0008t0011g0230others(1): Show | 4 | 232 | 0.0172 | -6 | c.577 others(25): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29472272 | TACACAC | T | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp1 HG02922.hp1 others(6): Show |
a0001a0002 | a0001c0002a0001c0005a0002c0003others(2): Show | a0001c0002t0002a0001c0002t0010a0001c0002t0027others(5): Show | a0001c0002t0002g0165a0001c0002t0010g0210a0001c0002t0027g0060others(6): Show | 9 | 232 | 0.0388 | -6 | c.577 others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29472293 | ACACACG | A | intron_variant | MODIFIER | HG00738.hp2 HG01175.hp2 HG02809.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0003 | a0001c0001t0006g0226a0001c0001t0006g0227a0001c0002t0003g0068 | 3 | 232 | 0.0129 | -6 | c.577 others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29473128 | TTTTGCC | T | intron_variant | MODIFIER | HG01891.hp1 HG02451.hp2 HG02572.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002a0001c0002t0010others(2): Show | a0001c0001t0001g0120a0001c0002t0002g0171a0001c0002t0010g0062others(2): Show | 5 | 232 | 0.0216 | -6 | c.577 others(23): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHN2_chr7_29189775_29519328 | 29494950 | TAAAAAA | T | intron_variant | MODIFIER | HG00438.hp1 HG00558.hp1 HG00597.hp2 others(28): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0008others(9): Show | a0001c0001t0003g0014a0001c0001t0003g0016a0001c0001t0003g0032others(28): Show | 31 | 232 | 0.1336 | -6 | c.655 others(21): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHODL_chr21_18239833_18272370 | 18260844 | CAACAAA | C | intron_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00639.hp1 others(57): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(9): Show | a0001c0001t0002g0005a0001c0001t0002g0013a0001c0001t0002g0022others(37): Show | 60 | 402 | 0.1493 | -6 | c.634 others(21): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
CHP2_chr16_23750026_23763935 | 23750933 | CTTTCTT | C | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG01243.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0001a0001c0001t0007g0001 | 10 | 392 | 0.0255 | -6 | c.-41 others(17): Show |
CHP2 | ENSG00000166869.3 | transcript | ENST00000300113.3 | protein_coding | 4092 | chr16 | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110669080 | TTATATA | T | downstream_gene_variant | MODIFIER | HG01074.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0117 | 1 | 172 | 0.0058 | -6 | c.*71 others(17): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4775 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110674457 | CCACACA | C | 3_prime_UTR_variant | MODIFIER | HG00673.hp1 HG01261.hp1 HG01952.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0039 | a0001c0001t0014g0098a0001c0001t0014g0102a0001c0001t0014g0130others(1): Show | 4 | 172 | 0.0233 | -6 | c.*17 others(17): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 1768 | chrX | TogoVar | |||||
CHRDL1_chrX_110668856_110800817 | 110675676 | CGTGTGT | C | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(48): Show |
a0001a0002a0003others(1): Show | a0001c0002a0002c0003a0003c0004others(1): Show | a0001c0002t0003a0001c0002t0004a0001c0002t0006others(9): Show | a0001c0002t0003g0001a0001c0002t0003g0004a0001c0002t0003g0018others(47): Show | 51 | 172 | 0.2965 | -6 | c.*54 others(15): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 549 | chrX | TogoVar | |||||
CHRDL1_chrX_110668856_110800817 | 110689072 | GTATATA | G | intron_variant | MODIFIER | HG01069.hp1 HG01192.hp1 HG03453.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(3): Show | a0001c0001t0001g0050a0001c0001t0002g0075a0001c0001t0010g0054others(4): Show | 7 | 172 | 0.0407 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689486 | ATATCTC | A | intron_variant | MODIFIER | HG02886.hp1 NA19030.hp2 |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0036a0004c0005t0050 | a0001c0001t0036g0003a0004c0005t0050g0072 | 2 | 172 | 0.0116 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689669 | ATATATC | A | intron_variant | MODIFIER | HG01167.hp1 HG01515.hp1 |
a0001 | a0001c0002 | a0001c0002t0004a0001c0002t0007 | a0001c0002t0004g0051a0001c0002t0007g0052 | 2 | 172 | 0.0116 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689677 | ATATATC | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(31): Show |
a0001a0003 | a0001c0002a0003c0004 | a0001c0002t0003a0001c0002t0004a0001c0002t0006others(6): Show | a0001c0002t0003g0001a0001c0002t0003g0004a0001c0002t0003g0018others(30): Show | 34 | 172 | 0.1977 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689685 | ATATATC | A | intron_variant | MODIFIER | HG01106.hp1 HG02630.hp2 HG02895.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0003a0001c0002t0004others(1): Show | a0001c0001t0005g0068a0001c0002t0003g0035a0001c0002t0003g0036others(4): Show | 7 | 172 | 0.0407 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689749 | ATATATC | A | intron_variant | MODIFIER | HG02055.hp1 HG02280.hp2 NA20129.hp2 |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0004a0001c0002t0006 | a0001c0002t0003g0031a0001c0002t0004g0012a0001c0002t0006g0020 | 3 | 172 | 0.0174 | -6 | c.779 others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689827 | ATATATC | A | intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0012 | 1 | 172 | 0.0058 | -6 | c.779 others(23): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689855 | ATATATC | A | intron_variant | MODIFIER | HG02055.hp1 NA20129.hp2 |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0006 | a0001c0002t0003g0031a0001c0002t0006g0020 | 2 | 172 | 0.0116 | -6 | c.779 others(23): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110689979 | ATATATC | A | intron_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0043 | 1 | 172 | 0.0058 | -6 | c.779 others(23): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110697814 | CCACACA | C | intron_variant | MODIFIER | HG00621.hp1 HG00738.hp1 HG00741.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(6): Show | a0001c0001t0001g0025a0001c0001t0001g0033a0001c0001t0002g0034others(9): Show | 12 | 172 | 0.0698 | -6 | c.609 others(23): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 7/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110744961 | TCACACA | T | intron_variant | MODIFIER | HG01109.hp1 HG01243.hp1 HG02055.hp1 others(22): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0019a0001c0001t0020a0001c0001t0036others(15): Show | a0001c0001t0019g0005a0001c0001t0020g0167a0001c0001t0020g0168others(21): Show | 25 | 172 | 0.1454 | -6 | c.301 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110747409 | AACACAC | A | intron_variant | MODIFIER | HG03471.hp1 NA19030.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0036a0001c0002t0007 | a0001c0001t0036g0003a0001c0002t0007g0165 | 2 | 172 | 0.0116 | -6 | c.301 others(25): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4/11 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110767641 | TAAAATA | T | intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0161 | 1 | 172 | 0.0058 | -6 | c.95- others(21): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74698676 | TACACAC | T | intron_variant | MODIFIER | HG02071.hp1 HG02683.hp2 HG02886.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0002a0001c0001t0005a0001c0002t0001others(2): Show | a0001c0001t0002g0021a0001c0001t0002g0246a0001c0001t0002g0251others(9): Show | 13 | 392 | 0.0332 | -6 | c.112 others(25): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 9/10 | chr11 | TogoVar | ||||||
CHRDL2_chr11_74691429_74736426 | 74719381 | TACACAC | T | intron_variant | MODIFIER | HG01099.hp1 HG01109.hp2 HG01255.hp1 others(6): Show |
a0001 | a0001c0003a0001c0004a0001c0006 | a0001c0003t0001a0001c0004t0001a0001c0006t0001 | a0001c0003t0001g0063a0001c0003t0001g0129a0001c0004t0001g0206others(6): Show | 9 | 392 | 0.0230 | -6 | c.83- others(19): Show |
CHRDL2 | ENSG00000054938.17 | transcript | ENST00000376332.8 | protein_coding | 1/10 | chr11 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184385666 | CAAAAAA | C | intron_variant | MODIFIER | HG01496.hp2 HG02698.hp1 HG03654.hp2 others(5): Show |
a0002a0013 | a0002c0004a0002c0009a0013c0035 | a0002c0004t0001a0002c0009t0001a0013c0035t0001 | a0002c0004t0001g0071a0002c0004t0001g0077a0002c0009t0001g0024others(2): Show | 8 | 428 | 0.0187 | -6 | c.181 others(23): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 14/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CHRFAM7A_chr15_30355566_30398540 | 30355896 | CAAAAAA | C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG02647.hp1 others(3): Show |
a0002a0003 | a0002c0009a0002c0027a0003c0003 | a0002c0009t0008a0002c0027t0008a0003c0003t0022 | a0002c0009t0008g0101a0002c0009t0008g0102a0002c0009t0008g0104others(3): Show | 6 | 133 | 0.0451 | -6 | c.*63 others(17): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 4669 | chr15 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30365801 | CTTTTTT | C | intron_variant | MODIFIER | HG00280.hp1 HG00738.hp1 HG00738.hp2 others(8): Show |
a0002a0003a0007 | a0002c0002a0002c0012a0003c0003others(2): Show | a0002c0002t0001a0002c0002t0013a0002c0012t0009others(6): Show | a0002c0002t0001g0047a0002c0002t0013g0058a0002c0012t0009g0111others(8): Show | 11 | 133 | 0.0827 | -6 | c.720 others(23): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 9/9 | chr15 | TogoVar | ||||||
CHRFAM7A_chr15_30355566_30398540 | 30393881 | GTGTCTA | G | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00609.hp1 HG01069.hp2 others(12): Show |
a0002a0004 | a0002c0002a0002c0011a0002c0015others(3): Show | a0002c0002t0007a0002c0011t0006a0002c0015t0007others(3): Show | a0002c0002t0007g0019a0002c0002t0007g0024a0002c0002t0007g0025others(10): Show | 15 | 133 | 0.1128 | -6 | c.-79 others(15): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 342 | chr15 | TogoVar | ||||||
CHRM1_chr11_62903679_62926363 | 62924668 | CTATATA | C | upstream_gene_variant | MODIFIER | HG01943.hp2 HG01975.hp2 HG03225.hp2 others(8): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0012a0002c0004t0001 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0008others(5): Show | 11 | 420 | 0.0262 | -6 | c.-35 others(17): Show |
CHRM1 | ENSG00000168539.4 | transcript | ENST00000306960.4 | protein_coding | 3306 | chr11 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136868746 | GCACACA | G | 5_prime_UTR_variant | MODIFIER | HG00639.hp2 HG01081.hp2 HG01099.hp2 others(21): Show |
a0001a0005 | a0001c0001a0005c0008 | a0001c0001t0020a0001c0001t0031a0001c0001t0032others(14): Show | a0001c0001t0020g0099a0001c0001t0020g0100a0001c0001t0020g0102others(21): Show | 24 | 320 | 0.0750 | -6 | c.-50 others(15): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 1/4 | 146092 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||
CHRM2_chr7_136863652_137025213 | 136889047 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00733.hp2 HG00735.hp2 others(32): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0004a0001c0001t0001g0005a0001c0001t0001g0006others(32): Show | 35 | 320 | 0.1094 | -6 | c.-12 others(27): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136944473 | ATGTGTG | A | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG00558.hp1 others(55): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0013a0001c0001t0001g0040others(54): Show | 58 | 320 | 0.1813 | -6 | c.-12 others(27): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 136968721 | AATATAT | A | intron_variant | MODIFIER | HG03654.hp1 HG03688.hp2 NA20752.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0008 | a0001c0001t0005g0178a0001c0001t0005g0179a0001c0001t0008g0272 | 3 | 320 | 0.0094 | -6 | c.-12 others(27): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |