Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNTNAP3B_chr9_41885536_42134426	41924645	GCACACA GCACACA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02572.hp1 HG03453.hp2 others(2): Show HG02486.hp1 HG02572.hp1 HG03453.hp2 NA18968.hp2 NA19090.hp1	a0001 a0002 a0011 others(2): Show a0001 a0002 a0011 a0032 a0034	a0001c0001 a0002c0002 a0011c0040 others(2): Show a0001c0001 a0002c0002 a0011c0040 a0032c0039 a0034c0038	a0001c0001t0002 a0002c0002t0022 a0011c0040t0007 others(2): Show a0001c0001t0002 a0002c0002t0022 a0011c0040t0007 a0032c0039t0014 a0034c0038t0002	a0001c0001t0002g0004 a0002c0002t0022g0068 a0011c0040t0007g0003 others(2): Show a0001c0001t0002g0004 a0002c0002t0022g0068 a0011c0040t0007g0003 a0032c0039t0014g0025 a0034c0038t0002g0016	5	108	0.0463	-6	c.236 others(23): Show c.2366-558_2366-553delTGTGTG	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	15/23			chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42030750	CAGAGAG CAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG02040.hp2 HG02486.hp1 HG02886.hp1 others(1): Show HG02040.hp2 HG02486.hp1 HG02886.hp1 HG03486.hp2	a0003 a0005 a0006 others(1): Show a0003 a0005 a0006 a0032	a0003c0003 a0005c0005 a0006c0041 others(1): Show a0003c0003 a0005c0005 a0006c0041 a0032c0039	a0003c0003t0004 a0005c0005t0006 a0006c0041t0002 others(1): Show a0003c0003t0004 a0005c0005t0006 a0006c0041t0002 a0032c0039t0014	a0003c0003t0004g0075 a0005c0005t0006g0091 a0006c0041t0002g0020 others(1): Show a0003c0003t0004g0075 a0005c0005t0006g0091 a0006c0041t0002g0020 a0032c0039t0014g0025	4	108	0.0370	-6	c.391 others(25): Show c.391-17231_391-17226delCTCTCT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23			chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42090840	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01175.hp2 HG02109.hp2 others(4): Show HG00280.hp2 HG01175.hp2 HG02109.hp2 HG03490.hp1 HG03704.hp1 NA19086.hp2 NA19090.hp2	a0004 a0027 a0028 a0004 a0027 a0028	a0004c0004 a0027c0026 a0028c0027 a0004c0004 a0027c0026 a0028c0027	a0004c0004t0005 a0027c0026t0020 a0028c0027t0005 a0004c0004t0005 a0027c0026t0020 a0028c0027t0005	a0004c0004t0005g0029 a0004c0004t0005g0030 a0004c0004t0005g0031 others(4): Show a0004c0004t0005g0029 a0004c0004t0005g0030 a0004c0004t0005g0031 a0004c0004t0005g0032 a0004c0004t0005g0034 a0027c0026t0020g0027 a0028c0027t0005g0033	7	108	0.0648	-6	c.196 others(25): Show c.196+13783_197-13779delGTGTGT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	2/23			chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42134350	AAAAAAG AAAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp1 HG03942.hp1 HG04115.hp1 others(4): Show HG01071.hp1 HG03942.hp1 HG04115.hp1 HG04115.hp2 NA18974.hp2 NA18998.hp1 NA19086.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0013c0021 a0002c0002 a0013c0021	a0002c0002t0001 a0002c0002t0012 a0013c0021t0027 a0002c0002t0001 a0002c0002t0012 a0013c0021t0027	a0002c0002t0001g0044 a0002c0002t0001g0052 a0002c0002t0001g0053 others(4): Show a0002c0002t0001g0044 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0065 a0002c0002t0012g0043 a0002c0002t0012g0051 a0013c0021t0027g0064	7	108	0.0648	-6	c.-52 others(17): Show c.-5262_-5257delCTTTTT	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding		4925		chr9	TogoVar
CNTNAP3_chr9_39059710_39293167	39093202	TTTAATA TTTAATA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp2 HG02109.hp1 HG02109.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0004 a0001c0001t0003 a0002c0003t0004	a0001c0001t0003g0002 a0002c0003t0004g0001 a0001c0001t0003g0002 a0002c0003t0004g0001	2	4	0.5000	-6	c.299 others(25): Show c.2996-4561_2996-4556delTATTAA	CNTNAP3	ENSG00000106714.18	transcript	ENST00000297668.11	protein_coding	18/23			chr9	TogoVar
CNTNAP4_chr16_76272401_76565757	76286174	AGTGTGT AGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00609.hp2 HG00642.hp2 others(14): Show HG00408.hp1 HG00609.hp2 HG00642.hp2 HG01346.hp1 HG01358.hp1 HG02040.hp1 HG02056.hp2 HG02165.hp1 HG02615.hp2 HG02886.hp1 HG02896.hp1 HG03579.hp2 HG04228.hp2 NA18943.hp2 NA18970.hp1 NA19010.hp1 NA19030.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0006 a0007 a0008 a0017 a0020	a0001c0001 a0002c0002 a0003c0006 others(6): Show a0001c0001 a0002c0002 a0003c0006 a0003c0028 a0006c0009 a0007c0013 a0008c0017 a0017c0036 a0020c0035	a0001c0001t0001 a0001c0001t0003 a0002c0002t0004 others(8): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0004 a0003c0006t0001 a0003c0006t0006 a0003c0028t0005 a0006c0009t0001 a0007c0013t0022 a0008c0017t0002 a0017c0036t0004 a0020c0035t0001	a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 others(14): Show a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0003g0022 a0001c0001t0003g0028 a0002c0002t0004g0021 a0003c0006t0001g0004 a0003c0006t0001g0027 a0003c0006t0001g0067 a0003c0006t0006g0063 a0003c0028t0005g0274 a0006c0009t0001g0023 a0007c0013t0022g0249 a0008c0017t0002g0068 a0017c0036t0004g0248 a0020c0035t0001g0029	17	274	0.0620	-6	c.85+ others(21): Show c.85+8467_85+8472delTGTGTG	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76298486	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01192.hp2 HG02895.hp1 others(4): Show HG00735.hp2 HG01192.hp2 HG02895.hp1 HG02897.hp1 HG02897.hp2 NA20300.hp1 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0019 a0002c0005 others(2): Show a0001c0001 a0001c0019 a0002c0005 a0003c0003 a0004c0010	a0001c0001t0015 a0001c0019t0001 a0002c0005t0002 others(2): Show a0001c0001t0015 a0001c0019t0001 a0002c0005t0002 a0003c0003t0001 a0004c0010t0002	a0001c0001t0015g0099 a0001c0001t0015g0272 a0001c0019t0001g0198 others(4): Show a0001c0001t0015g0099 a0001c0001t0015g0272 a0001c0019t0001g0198 a0002c0005t0002g0187 a0002c0005t0002g0188 a0003c0003t0001g0271 a0004c0010t0002g0186	7	274	0.0256	-6	c.86- others(23): Show c.86-17888_86-17883delTGTGTG	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76307503	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp1 NA19063.hp2 others(1): Show HG00558.hp1 HG00621.hp1 NA19063.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 a0001c0001t0001 a0001c0004t0001 a0001c0004t0003	a0001c0001t0001g0095 a0001c0004t0001g0074 a0001c0004t0001g0082 others(1): Show a0001c0001t0001g0095 a0001c0004t0001g0074 a0001c0004t0001g0082 a0001c0004t0003g0094	4	274	0.0146	-6	c.86- others(21): Show c.86-8878_86-8873delTATATA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76317821	CTTAAGT CTTAAGT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03579.hp2 HG02886.hp1 HG03579.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0006 a0003c0006t0001 a0003c0006t0006	a0003c0006t0001g0067 a0003c0006t0006g0063 a0003c0006t0001g0067 a0003c0006t0006g0063	2	274	0.0073	-6	c.196 others(23): Show c.196+1302_196+1307delAGTTTA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76318766	AATAATC AATAATC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18906.hp2 HG02109.hp2 NA18906.hp2	a0003 a0013 a0003 a0013	a0003c0003 a0013c0033 a0003c0003 a0013c0033	a0003c0003t0005 a0013c0033t0002 a0003c0003t0005 a0013c0033t0002	a0003c0003t0005g0047 a0013c0033t0002g0050 a0003c0003t0005g0047 a0013c0033t0002g0050	2	274	0.0073	-6	c.196 others(23): Show c.196+2255_196+2260delCATAAT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76334176	TATAATA TATAATA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00738.hp2 HG01074.hp2 others(26): Show HG00280.hp1 HG00738.hp2 HG01074.hp2 HG01168.hp2 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01928.hp1 HG02257.hp1 HG02602.hp2 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02886.hp2 HG03130.hp2 HG03195.hp2 HG03239.hp1 HG03492.hp2 HG03669.hp2 HG03710.hp2 HG04115.hp1 NA18981.hp2 NA18998.hp2 NA18999.hp2 NA19012.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0021 a0025	a0001c0001 a0001c0004 a0002c0002 others(7): Show a0001c0001 a0001c0004 a0002c0002 a0002c0005 a0002c0042 a0003c0003 a0003c0006 a0004c0007 a0021c0037 a0025c0039	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0004t0001 a0002c0002t0002 a0002c0002t0005 a0002c0005t0002 a0002c0042t0008 a0003c0003t0003 a0003c0006t0001 a0004c0007t0004 a0021c0037t0006 a0025c0039t0001	a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0185 others(26): Show a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0185 a0001c0001t0001g0195 a0001c0001t0002g0177 a0001c0001t0003g0169 a0001c0001t0003g0180 a0001c0001t0003g0184 a0001c0001t0004g0172 a0001c0001t0005g0163 a0001c0001t0012g0179 a0001c0001t0019g0183 a0001c0001t0020g0181 a0001c0004t0001g0122 a0001c0004t0001g0165 a0001c0004t0001g0170 a0001c0004t0001g0176 a0002c0002t0002g0012 a0002c0002t0002g0167 a0002c0002t0002g0182 a0002c0002t0005g0178 a0002c0005t0002g0010 a0002c0042t0008g0036 a0003c0003t0003g0011 a0003c0006t0001g0005 a0003c0006t0001g0192 a0004c0007t0004g0055 a0021c0037t0006g0171 a0025c0039t0001g0168	29	274	0.1058	-6	c.196 others(25): Show c.196+17676_196+17681delTAATAA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76368201	CTAAAGA CTAAAGA	C C	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA19066.hp1 NA19082.hp1 NA18944.hp2 NA19066.hp1 NA19082.hp1	a0004 a0019 a0004 a0019	a0004c0010 a0019c0032 a0004c0010 a0019c0032	a0004c0010t0002 a0019c0032t0001 a0004c0010t0002 a0019c0032t0001	a0004c0010t0002g0085 a0004c0010t0002g0086 a0019c0032t0001g0013 a0004c0010t0002g0085 a0004c0010t0002g0086 a0019c0032t0001g0013	3	274	0.0110	-6	c.390 others(25): Show c.390+12697_390+12702delTAAAGA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76376907	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02895.hp2 HG03491.hp2 others(1): Show HG02630.hp1 HG02895.hp2 HG03491.hp2 NA19077.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0005 a0003c0006 others(1): Show a0001c0001 a0002c0005 a0003c0006 a0004c0007	a0001c0001t0017 a0002c0005t0002 a0003c0006t0021 others(1): Show a0001c0001t0017 a0002c0005t0002 a0003c0006t0021 a0004c0007t0002	a0001c0001t0017g0034 a0002c0005t0002g0257 a0003c0006t0021g0001 others(1): Show a0001c0001t0017g0034 a0002c0005t0002g0257 a0003c0006t0021g0001 a0004c0007t0002g0002	4	274	0.0146	-6	c.390 others(25): Show c.390+21438_390+21443delGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76385547	AGTGTGT AGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01257.hp2 HG01981.hp1 others(7): Show HG00423.hp1 HG01257.hp2 HG01981.hp1 HG03209.hp1 NA18981.hp1 NA18999.hp1 NA19002.hp2 NA19007.hp1 NA19060.hp2 NA20129.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0018 others(3): Show a0001c0001 a0001c0004 a0001c0018 a0002c0002 a0002c0005 a0003c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 a0001c0004t0001 a0001c0018t0001 a0002c0002t0002 a0002c0005t0004 a0003c0006t0001 a0003c0006t0006	a0001c0001t0001g0062 a0001c0001t0001g0200 a0001c0001t0003g0197 others(7): Show a0001c0001t0001g0062 a0001c0001t0001g0200 a0001c0001t0003g0197 a0001c0001t0012g0117 a0001c0004t0001g0107 a0001c0018t0001g0106 a0002c0002t0002g0145 a0002c0005t0004g0154 a0003c0006t0001g0112 a0003c0006t0006g0205	10	274	0.0365	-6	c.390 others(25): Show c.390+30061_390+30066delGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76395945	TCTCAAA TCTCAAA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 NA18968.hp1 NA19003.hp1 HG00558.hp2 NA18968.hp1 NA19003.hp1	a0001 a0002 a0024 a0001 a0002 a0024	a0001c0004 a0002c0002 a0024c0022 a0001c0004 a0002c0002 a0024c0022	a0001c0004t0001 a0002c0002t0004 a0024c0022t0001 a0001c0004t0001 a0002c0002t0004 a0024c0022t0001	a0001c0004t0001g0006 a0002c0002t0004g0150 a0024c0022t0001g0255 a0001c0004t0001g0006 a0002c0002t0004g0150 a0024c0022t0001g0255	3	274	0.0110	-6	c.391 others(25): Show c.391-31503_391-31498delAAACTC	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76397939	TATATAC TATATAC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01081.hp1 HG02451.hp1 others(5): Show HG00558.hp2 HG01081.hp1 HG02451.hp1 HG02886.hp1 HG02895.hp2 HG03209.hp2 NA18943.hp1 NA19009.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0024	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0003c0006 a0004c0007 a0024c0022	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0002c0002t0004 a0003c0003t0006 a0003c0006t0001 a0004c0007t0002 a0024c0022t0001	a0001c0001t0001g0008 a0001c0001t0003g0235 a0001c0001t0007g0003 others(5): Show a0001c0001t0001g0008 a0001c0001t0003g0235 a0001c0001t0007g0003 a0002c0002t0004g0079 a0003c0003t0006g0262 a0003c0006t0001g0067 a0004c0007t0002g0002 a0024c0022t0001g0255	8	274	0.0292	-6	c.391 others(25): Show c.391-29507_391-29502delCATATA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76424759	AAAAAAC AAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp2 HG00423.hp2 others(88): Show HG00099.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp1 HG01081.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01934.hp1 HG01981.hp2 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02132.hp2 HG02165.hp1 HG02486.hp1 HG02486.hp2 HG02602.hp1 HG02647.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02896.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp1 HG03486.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03710.hp2 HG03942.hp2 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18522.hp2 NA18944.hp1 NA18955.hp2 NA18962.hp1 NA18987.hp1 NA18994.hp2 NA18998.hp1 NA19000.hp2 NA19002.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19068.hp2 NA19080.hp1 NA19083.hp1 NA19085.hp1 NA19088.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0010 a0015 a0016 a0026	a0001c0001 a0001c0004 a0001c0015 others(18): Show a0001c0001 a0001c0004 a0001c0015 a0001c0018 a0002c0002 a0002c0005 a0002c0011 a0002c0014 a0003c0003 a0003c0006 a0003c0028 a0004c0007 a0004c0027 a0005c0008 a0005c0043 a0006c0009 a0007c0013 a0010c0016 a0015c0034 a0016c0030 a0026c0041	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(40): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0004t0001 a0001c0015t0006 a0001c0018t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0005 a0002c0002t0023 a0002c0002t0024 a0002c0002t0028 a0002c0005t0002 a0002c0005t0004 a0002c0011t0002 a0002c0011t0004 a0002c0011t0005 a0002c0014t0006 a0002c0014t0013 a0003c0003t0004 a0003c0003t0006 a0003c0003t0007 a0003c0003t0018 a0003c0003t0027 a0003c0006t0001 a0003c0028t0005 a0004c0007t0002 a0004c0007t0004 a0004c0027t0002 a0005c0008t0001 a0005c0043t0001 a0006c0009t0001 a0006c0009t0004 a0007c0013t0002 a0007c0013t0022 a0010c0016t0002 a0015c0034t0006 a0016c0030t0004 a0026c0041t0004	a0001c0001t0001g0017 a0001c0001t0001g0040 a0001c0001t0001g0056 others(88): Show a0001c0001t0001g0017 a0001c0001t0001g0040 a0001c0001t0001g0056 a0001c0001t0001g0081 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0123 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0174 a0001c0001t0001g0185 a0001c0001t0001g0200 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0100 a0001c0001t0003g0118 a0001c0001t0003g0124 a0001c0001t0003g0127 a0001c0001t0003g0184 a0001c0001t0003g0235 a0001c0001t0004g0053 a0001c0001t0005g0046 a0001c0001t0005g0163 a0001c0001t0005g0202 a0001c0001t0009g0189 a0001c0001t0010g0250 a0001c0001t0016g0088 a0001c0004t0001g0087 a0001c0004t0001g0122 a0001c0004t0001g0155 a0001c0004t0001g0170 a0001c0015t0006g0166 a0001c0018t0001g0106 a0001c0018t0001g0113 a0002c0002t0002g0039 a0002c0002t0002g0059 a0002c0002t0002g0102 a0002c0002t0002g0128 a0002c0002t0002g0136 a0002c0002t0002g0145 a0002c0002t0002g0157 a0002c0002t0002g0167 a0002c0002t0002g0212 a0002c0002t0002g0224 a0002c0002t0004g0014 a0002c0002t0004g0021 a0002c0002t0004g0138 a0002c0002t0004g0207 a0002c0002t0005g0018 a0002c0002t0005g0019 a0002c0002t0023g0265 a0002c0002t0024g0049 a0002c0002t0028g0239 a0002c0005t0002g0187 a0002c0005t0002g0188 a0002c0005t0002g0194 a0002c0005t0004g0132 a0002c0011t0002g0216 a0002c0011t0004g0078 a0002c0011t0005g0139 a0002c0011t0005g0144 a0002c0014t0006g0269 a0002c0014t0013g0054 a0002c0014t0013g0263 a0003c0003t0004g0270 a0003c0003t0006g0045 a0003c0003t0007g0259 a0003c0003t0018g0164 a0003c0003t0027g0237 a0003c0006t0001g0027 a0003c0028t0005g0274 a0004c0007t0002g0208 a0004c0007t0004g0055 a0004c0027t0002g0234 a0005c0008t0001g0091 a0005c0043t0001g0041 a0006c0009t0001g0258 a0006c0009t0004g0273 a0007c0013t0002g0210 a0007c0013t0022g0249 a0010c0016t0002g0135 a0010c0016t0002g0190 a0015c0034t0006g0209 a0016c0030t0004g0071 a0026c0041t0004g0193	91	274	0.3321	-6	c.391 others(23): Show c.391-2675_391-2670delCAAAAA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76451599	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02015.hp2 HG02155.hp1 others(5): Show HG00673.hp1 HG02015.hp2 HG02155.hp1 HG04228.hp2 NA18955.hp1 NA19062.hp1 NA19070.hp1 NA19085.hp2	a0005 a0008 a0005 a0008	a0005c0008 a0008c0017 a0005c0008 a0008c0017	a0005c0008t0001 a0005c0008t0003 a0008c0017t0002 a0005c0008t0001 a0005c0008t0003 a0008c0017t0002	a0005c0008t0001g0060 a0005c0008t0001g0061 a0005c0008t0001g0108 others(5): Show a0005c0008t0001g0060 a0005c0008t0001g0061 a0005c0008t0001g0108 a0005c0008t0001g0220 a0005c0008t0001g0221 a0005c0008t0003g0152 a0008c0017t0002g0068 a0008c0017t0002g0214	8	274	0.0292	-6	c.107 others(23): Show c.1072-879_1072-874delGTGTGT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	7/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76483051	AGCTTGG AGCTTGG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(92): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00735.hp1 HG00741.hp1 HG01069.hp1 HG01074.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01358.hp2 HG01433.hp1 HG01981.hp1 HG01981.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp2 HG02717.hp2 HG02735.hp1 HG02809.hp2 HG02895.hp2 HG02896.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03579.hp1 HG03669.hp1 HG04184.hp1 NA18612.hp1 NA18943.hp1 NA18943.hp2 NA18960.hp1 NA18979.hp2 NA18987.hp2 NA18999.hp1 NA19002.hp1 NA19004.hp2 NA19010.hp1 NA19043.hp2 NA19056.hp2 NA19062.hp2 NA19066.hp1 NA19066.hp2 NA19070.hp2 NA19077.hp2 NA19088.hp1 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0011 a0013 a0014 a0017 a0018 a0019 a0024	a0001c0001 a0001c0019 a0002c0002 others(16): Show a0001c0001 a0001c0019 a0002c0002 a0002c0014 a0002c0021 a0002c0026 a0003c0003 a0003c0006 a0004c0007 a0005c0008 a0006c0009 a0007c0013 a0011c0045 a0013c0033 a0014c0031 a0017c0036 a0018c0029 a0019c0032 a0024c0022	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(41): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0019t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0024 a0002c0014t0013 a0002c0021t0004 a0002c0026t0004 a0003c0003t0003 a0003c0003t0006 a0003c0003t0007 a0003c0003t0011 a0003c0003t0030 a0003c0006t0005 a0003c0006t0021 a0004c0007t0002 a0004c0007t0004 a0004c0007t0008 a0004c0007t0014 a0004c0007t0026 a0005c0008t0001 a0006c0009t0001 a0006c0009t0003 a0006c0009t0004 a0007c0013t0002 a0007c0013t0004 a0007c0013t0022 a0011c0045t0014 a0013c0033t0002 a0014c0031t0002 a0017c0036t0004 a0018c0029t0005 a0019c0032t0001 a0024c0022t0001	a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 others(92): Show a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0062 a0001c0001t0001g0083 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0114 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0140 a0001c0001t0001g0160 a0001c0001t0001g0196 a0001c0001t0001g0230 a0001c0001t0002g0177 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0022 a0001c0001t0003g0028 a0001c0001t0003g0032 a0001c0001t0003g0100 a0001c0001t0003g0116 a0001c0001t0003g0126 a0001c0001t0003g0127 a0001c0001t0003g0169 a0001c0001t0003g0175 a0001c0001t0003g0197 a0001c0001t0003g0223 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0233 a0001c0001t0003g0236 a0001c0001t0004g0053 a0001c0001t0006g0052 a0001c0001t0006g0161 a0001c0001t0007g0003 a0001c0001t0009g0189 a0001c0001t0017g0034 a0001c0001t0019g0183 a0001c0001t0020g0181 a0001c0019t0001g0198 a0002c0002t0001g0125 a0002c0002t0002g0012 a0002c0002t0002g0115 a0002c0002t0002g0182 a0002c0002t0002g0201 a0002c0002t0002g0206 a0002c0002t0002g0224 a0002c0002t0004g0009 a0002c0002t0004g0079 a0002c0002t0004g0109 a0002c0002t0004g0129 a0002c0002t0004g0146 a0002c0002t0024g0049 a0002c0014t0013g0263 a0002c0021t0004g0162 a0002c0026t0004g0007 a0003c0003t0003g0011 a0003c0003t0006g0045 a0003c0003t0006g0264 a0003c0003t0006g0268 a0003c0003t0007g0259 a0003c0003t0007g0260 a0003c0003t0011g0243 a0003c0003t0011g0244 a0003c0003t0011g0246 a0003c0003t0030g0245 a0003c0006t0005g0131 a0003c0006t0021g0001 a0004c0007t0002g0002 a0004c0007t0002g0199 a0004c0007t0004g0055 a0004c0007t0008g0238 a0004c0007t0014g0142 a0004c0007t0026g0073 a0005c0008t0001g0091 a0006c0009t0001g0023 a0006c0009t0001g0251 a0006c0009t0001g0258 a0006c0009t0003g0031 a0006c0009t0004g0273 a0007c0013t0002g0210 a0007c0013t0004g0035 a0007c0013t0022g0249 a0011c0045t0014g0075 a0013c0033t0002g0050 a0014c0031t0002g0057 a0017c0036t0004g0248 a0018c0029t0005g0077 a0019c0032t0001g0013 a0024c0022t0001g0255	95	274	0.3467	-6	c.188 others(25): Show c.1882+3514_1882+3519delGCTTGG	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	12/23			chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76483231	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01109.hp2 HG01433.hp1 others(19): Show HG01081.hp2 HG01109.hp2 HG01433.hp1 HG01884.hp1 HG02132.hp2 HG02280.hp2 HG02895.hp2 HG02965.hp2 HG03041.hp1 HG03098.hp2 HG03195.hp1 HG03209.hp2 HG03471.hp2 HG03486.hp1 NA18944.hp2 NA18960.hp2 NA18979.hp1 NA18991.hp2 NA19010.hp2 NA19011.hp1 NA19060.hp1 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0011 a0015	a0001c0001 a0001c0004 a0002c0002 others(7): Show a0001c0001 a0001c0004 a0002c0002 a0002c0005 a0003c0003 a0003c0006 a0004c0007 a0004c0010 a0011c0045 a0015c0034	a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 others(14): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 a0001c0004t0006 a0002c0002t0002 a0002c0002t0023 a0002c0005t0004 a0003c0003t0006 a0003c0003t0027 a0003c0006t0005 a0004c0007t0002 a0004c0007t0004 a0004c0007t0008 a0004c0007t0026 a0004c0010t0002 a0011c0045t0014 a0015c0034t0006	a0001c0001t0001g0123 a0001c0001t0003g0111 a0001c0004t0001g0087 others(19): Show a0001c0001t0001g0123 a0001c0001t0003g0111 a0001c0004t0001g0087 a0001c0004t0001g0222 a0001c0004t0006g0225 a0002c0002t0002g0201 a0002c0002t0023g0265 a0002c0005t0004g0072 a0002c0005t0004g0104 a0002c0005t0004g0215 a0003c0003t0006g0262 a0003c0003t0027g0237 a0003c0006t0005g0131 a0004c0007t0002g0002 a0004c0007t0002g0199 a0004c0007t0002g0208 a0004c0007t0004g0055 a0004c0007t0008g0238 a0004c0007t0026g0073 a0004c0010t0002g0085 a0011c0045t0014g0075 a0015c0034t0006g0209	22	274	0.0803	-6	c.188 others(25): Show c.1882+3735_1882+3740delCACACA	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76515938	ATTTTAC ATTTTAC	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01884.hp1 HG01884.hp2 others(10): Show HG01433.hp1 HG01884.hp1 HG01884.hp2 HG02257.hp2 HG02717.hp1 HG02723.hp2 HG02896.hp1 HG03453.hp1 HG03540.hp1 HG03579.hp1 NA18906.hp1 NA19043.hp2 NA19240.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0006 a0007 a0026	a0001c0001 a0001c0015 a0002c0002 others(5): Show a0001c0001 a0001c0015 a0002c0002 a0003c0003 a0004c0007 a0006c0009 a0007c0013 a0026c0041	a0001c0001t0004 a0001c0015t0004 a0002c0002t0002 others(7): Show a0001c0001t0004 a0001c0015t0004 a0002c0002t0002 a0002c0002t0004 a0003c0003t0004 a0003c0003t0027 a0004c0007t0004 a0006c0009t0004 a0007c0013t0022 a0026c0041t0004	a0001c0001t0004g0053 a0001c0001t0004g0172 a0001c0001t0004g0191 others(10): Show a0001c0001t0004g0053 a0001c0001t0004g0172 a0001c0001t0004g0191 a0001c0015t0004g0089 a0002c0002t0002g0212 a0002c0002t0004g0146 a0002c0002t0004g0207 a0003c0003t0004g0270 a0003c0003t0027g0237 a0004c0007t0004g0055 a0006c0009t0004g0273 a0007c0013t0022g0249 a0026c0041t0004g0193	13	274	0.0475	-6	c.236 others(25): Show c.2366-5198_2366-5193delTACTTT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP5_chr2_124020287_124926219	124044889	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01261.hp1 HG02293.hp1 others(5): Show HG01070.hp1 HG01261.hp1 HG02293.hp1 HG02886.hp2 HG02922.hp2 NA18906.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0043 a0001c0001t0002g0022 a0001c0001t0002g0023 others(5): Show a0001c0001t0001g0043 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0042 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0002t0001g0062 a0001c0002t0001g0063	8	64	0.1250	-6	c.82+ others(23): Show c.82+19195_82+19200delCACACA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124086188	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03098.hp1 HG03139.hp1 others(2): Show HG02451.hp1 HG03098.hp1 HG03139.hp1 HG03453.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005	a0001c0001t0001g0002 a0001c0002t0001g0046 a0001c0002t0004g0044 others(2): Show a0001c0001t0001g0002 a0001c0002t0001g0046 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0005g0045	5	64	0.0781	-6	c.82+ others(23): Show c.82+60477_82+60482delTTTTTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124098978	ACAAATT ACAAATT	A A	intron_variant intron_variant	MODIFIER	HG02897.hp2 NA21309.hp2 HG02897.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0024 a0001c0002t0001g0054 a0001c0001t0002g0024 a0001c0002t0001g0054	2	64	0.0313	-6	c.82+ others(23): Show c.82+73248_82+73253delAAATTC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124194406	TATATAA TATATAA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02698.hp2 HG02717.hp1 others(7): Show HG02257.hp1 HG02698.hp2 HG02717.hp1 HG02886.hp2 HG02897.hp2 HG02922.hp1 HG02970.hp1 NA19043.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0003c0007	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0002t0010 a0002c0004t0001 a0003c0007t0001	a0001c0001t0001g0020 a0001c0001t0001g0043 a0001c0001t0002g0024 others(7): Show a0001c0001t0001g0020 a0001c0001t0001g0043 a0001c0001t0002g0024 a0001c0002t0001g0005 a0001c0002t0001g0063 a0001c0002t0002g0031 a0001c0002t0002g0060 a0001c0002t0010g0032 a0002c0004t0001g0001 a0003c0007t0001g0017	10	64	0.1563	-6	c.83- others(23): Show c.83-27289_83-27284delTAAATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124227640	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp2 NA20300.hp2 HG03486.hp1 HG03486.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0018 a0001c0002t0001 a0001c0001t0001 a0001c0001t0018 a0001c0002t0001	a0001c0001t0001g0011 a0001c0001t0018g0021 a0001c0002t0001g0016 a0001c0001t0001g0011 a0001c0001t0018g0021 a0001c0002t0001g0016	3	64	0.0469	-6	c.187 others(23): Show c.187+5865_187+5870delGTGTGT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124249961	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02897.hp1 HG02886.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0006 a0001c0001t0007g0039 a0001c0001t0003g0006 a0001c0001t0007g0039	2	64	0.0313	-6	c.381 others(23): Show c.381+7594_381+7599delGTGTGT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124249987	GTGTGTA GTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02145.hp2 HG02451.hp1 others(14): Show HG01261.hp2 HG02145.hp2 HG02451.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp1 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 NA19043.hp2 NA19240.hp1 NA20129.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0002c0008	a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0016 a0002c0004t0001 a0002c0008t0001	a0001c0001t0001g0002 a0001c0001t0004g0052 a0001c0001t0014g0037 others(14): Show a0001c0001t0001g0002 a0001c0001t0004g0052 a0001c0001t0014g0037 a0001c0002t0001g0005 a0001c0002t0001g0016 a0001c0002t0001g0046 a0001c0002t0001g0054 a0001c0002t0002g0030 a0001c0002t0002g0060 a0001c0002t0003g0056 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0005g0045 a0001c0002t0007g0009 a0001c0002t0016g0055 a0002c0004t0001g0001 a0002c0008t0001g0038	17	64	0.2656	-6	c.381 others(23): Show c.381+7600_381+7605delATGTGT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124264374	GCACACA GCACACA	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG03139.hp2 NA18906.hp1 others(1): Show HG01069.hp2 HG03139.hp2 NA18906.hp1 NA19000.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0009 a0001c0001t0015 a0001c0002t0001 others(1): Show a0001c0001t0009 a0001c0001t0015 a0001c0002t0001 a0004c0006t0001	a0001c0001t0009g0061 a0001c0001t0015g0036 a0001c0002t0001g0062 others(1): Show a0001c0001t0009g0061 a0001c0001t0015g0036 a0001c0002t0001g0062 a0004c0006t0001g0013	4	64	0.0625	-6	c.381 others(25): Show c.381+21990_381+21995delCACACA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124297810	TTTATTA TTTATTA	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01891.hp2 HG02698.hp2 others(5): Show HG01070.hp1 HG01891.hp2 HG02698.hp2 HG02886.hp1 HG03098.hp2 HG03225.hp1 HG03453.hp1 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0003 a0001c0002t0019	a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0002g0042 others(5): Show a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0002g0042 a0001c0001t0003g0006 a0001c0002t0001g0007 a0001c0002t0001g0059 a0001c0002t0003g0004 a0001c0002t0019g0051	8	64	0.1250	-6	c.381 others(25): Show c.381+55462_381+55467delATTATT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124316804	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG02698.hp1 HG03704.hp2 others(1): Show HG02293.hp2 HG02698.hp1 HG03704.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0020 a0001c0001t0001 a0001c0001t0002 a0001c0001t0020	a0001c0001t0001g0011 a0001c0001t0001g0026 a0001c0001t0002g0027 others(1): Show a0001c0001t0001g0011 a0001c0001t0001g0026 a0001c0001t0002g0027 a0001c0001t0020g0014	4	64	0.0625	-6	c.381 others(25): Show c.381+74430_381+74435delAAAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124458293	TTATATA TTATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01069.hp1 HG01069.hp2 others(39): Show HG00423.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01261.hp1 HG01261.hp2 HG01891.hp1 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03704.hp1 NA18906.hp1 NA19000.hp2 NA19043.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0001c0002 a0003c0007 others(2): Show a0001c0001 a0001c0002 a0003c0007 a0004c0006 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0020 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0002t0011 a0001c0002t0012 a0001c0002t0019 a0003c0007t0001 a0004c0006t0001 a0005c0005t0001	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0033 others(39): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0002g0019 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0027 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0003g0006 a0001c0001t0003g0057 a0001c0001t0005g0040 a0001c0001t0006g0025 a0001c0001t0007g0039 a0001c0001t0009g0061 a0001c0001t0013g0041 a0001c0001t0014g0037 a0001c0001t0015g0036 a0001c0001t0017g0012 a0001c0001t0020g0014 a0001c0002t0001g0003 a0001c0002t0001g0007 a0001c0002t0001g0016 a0001c0002t0001g0046 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0002g0031 a0001c0002t0002g0060 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0005g0045 a0001c0002t0006g0028 a0001c0002t0007g0009 a0001c0002t0008g0058 a0001c0002t0010g0032 a0001c0002t0011g0029 a0001c0002t0012g0018 a0001c0002t0019g0051 a0003c0007t0001g0017 a0004c0006t0001g0013 a0005c0005t0001g0008	42	64	0.6563	-6	c.918 others(25): Show c.918+11375_918+11380delTATATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124493965	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01069.hp2 HG01070.hp2 others(16): Show HG00423.hp1 HG01069.hp2 HG01070.hp2 HG01261.hp2 HG01891.hp1 HG02145.hp1 HG02257.hp2 HG02293.hp2 HG02698.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG03139.hp2 HG03704.hp1 NA19000.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0004c0006 a0005c0005 a0001c0001 a0004c0006 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0020 a0004c0006t0001 a0005c0005t0001	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0033 others(16): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0033 a0001c0001t0002g0019 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0048 a0001c0001t0005g0040 a0001c0001t0006g0025 a0001c0001t0007g0039 a0001c0001t0009g0061 a0001c0001t0013g0041 a0001c0001t0014g0037 a0001c0001t0015g0036 a0001c0001t0017g0012 a0001c0001t0020g0014 a0004c0006t0001g0013 a0005c0005t0001g0008	19	64	0.2969	-6	c.106 others(27): Show c.1063-10294_1063-10289delACACAC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	7/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124562866	ATTATCT ATTATCT	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01070.hp1 HG01261.hp2 others(8): Show HG01069.hp2 HG01070.hp1 HG01261.hp2 HG02451.hp1 HG02922.hp2 HG02970.hp1 HG03139.hp2 HG03453.hp2 NA19240.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0014 a0001c0001t0015 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004	a0001c0001t0001g0043 a0001c0001t0002g0022 a0001c0001t0002g0023 others(8): Show a0001c0001t0001g0043 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0042 a0001c0001t0009g0061 a0001c0001t0014g0037 a0001c0001t0015g0036 a0001c0002t0001g0046 a0001c0002t0002g0060 a0001c0002t0004g0044 a0001c0002t0004g0047	11	64	0.1719	-6	c.165 others(23): Show c.1650-346_1650-341delCTTTAT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	10/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124567852	GATAGAT GATAGAT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02897.hp1 NA19043.hp2 others(1): Show HG01891.hp1 HG02897.hp1 NA19043.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0007 a0001c0001t0017 a0001c0002t0001 others(1): Show a0001c0001t0007 a0001c0001t0017 a0001c0002t0001 a0002c0004t0001	a0001c0001t0007g0039 a0001c0001t0017g0012 a0001c0002t0001g0064 others(1): Show a0001c0001t0007g0039 a0001c0001t0017g0012 a0001c0002t0001g0064 a0002c0004t0001g0001	4	64	0.0625	-6	c.175 others(25): Show c.1756+4531_1756+4536delTAGATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124567860	GATAGAT GATAGAT	G G	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02897.hp2 HG03225.hp2 HG01069.hp1 HG02897.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0002t0016 a0001c0001t0002 a0001c0002t0001 a0001c0002t0016	a0001c0001t0002g0024 a0001c0002t0001g0003 a0001c0002t0016g0055 a0001c0001t0002g0024 a0001c0002t0001g0003 a0001c0002t0016g0055	3	64	0.0469	-6	c.175 others(25): Show c.1756+4539_1756+4544delTAGATA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124576138	ATATATC ATATATC	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01070.hp1 HG02293.hp2 others(11): Show HG01069.hp2 HG01070.hp1 HG02293.hp2 HG02451.hp1 HG02717.hp2 HG02922.hp1 HG02970.hp1 HG03139.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 NA19240.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0015 a0001c0001t0018 a0001c0001t0020 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0001c0002t0012 a0001c0002t0019	a0001c0001t0001g0043 a0001c0001t0002g0042 a0001c0001t0009g0061 others(11): Show a0001c0001t0001g0043 a0001c0001t0002g0042 a0001c0001t0009g0061 a0001c0001t0015g0036 a0001c0001t0018g0021 a0001c0001t0020g0014 a0001c0002t0001g0046 a0001c0002t0002g0031 a0001c0002t0002g0060 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0008g0058 a0001c0002t0012g0018 a0001c0002t0019g0051	14	64	0.2188	-6	c.175 others(27): Show c.1756+12845_1756+12850delCTATAT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124600731	CAGAGAG CAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG03225.hp2 NA18906.hp1 HG02970.hp1 HG03225.hp2 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0016 a0001c0002t0001 a0001c0002t0002 a0001c0002t0016	a0001c0002t0001g0062 a0001c0002t0002g0060 a0001c0002t0016g0055 a0001c0002t0001g0062 a0001c0002t0002g0060 a0001c0002t0016g0055	3	64	0.0469	-6	c.175 others(25): Show c.1757-9038_1757-9033delGAGAGA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124600763	GAGAGAA GAGAGAA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA21309.hp1 NA18906.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0057 a0001c0001t0004g0053 a0001c0001t0003g0057 a0001c0001t0004g0053	2	64	0.0313	-6	c.175 others(25): Show c.1757-9032_1757-9027delAAGAGA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124614983	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01070.hp2 HG01261.hp1 others(20): Show HG01069.hp1 HG01070.hp2 HG01261.hp1 HG01261.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG03130.hp1 HG03139.hp2 HG03225.hp1 HG03704.hp2 NA18906.hp2 NA19000.hp1 NA20129.hp2 NA20300.hp2 NA21309.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0002 a0005c0005 others(1): Show a0001c0001 a0001c0002 a0005c0005 a0006c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0020 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0019 a0005c0005t0001 a0006c0003t0008	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0026 others(20): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0002g0027 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0003g0057 a0001c0001t0004g0053 a0001c0001t0006g0025 a0001c0001t0007g0039 a0001c0001t0009g0061 a0001c0001t0013g0041 a0001c0001t0014g0037 a0001c0001t0020g0014 a0001c0002t0001g0003 a0001c0002t0002g0031 a0001c0002t0002g0034 a0001c0002t0006g0028 a0001c0002t0007g0009 a0001c0002t0008g0058 a0001c0002t0019g0051 a0005c0005t0001g0008 a0006c0003t0008g0035	23	64	0.3594	-6	c.187 others(25): Show c.1876+5072_1876+5077delAAAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124619908	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 NA20300.hp2 HG02970.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0011 a0001c0002t0002g0060 a0001c0001t0001g0011 a0001c0002t0002g0060	2	64	0.0313	-6	c.187 others(27): Show c.1876+10011_1876+10016delATATAT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124639629	ATTATAC ATTATAC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG01069.hp2 others(11): Show HG00423.hp1 HG00423.hp2 HG01069.hp2 HG01070.hp1 HG02451.hp1 HG03098.hp1 HG03225.hp2 HG03453.hp2 HG03704.hp1 NA19000.hp2 NA19043.hp2 NA19240.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0015 a0001c0002t0001 a0001c0002t0004 a0001c0002t0016 a0002c0004t0001 a0004c0006t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0043 others(11): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0043 a0001c0001t0002g0019 a0001c0001t0002g0042 a0001c0001t0002g0048 a0001c0001t0003g0057 a0001c0001t0015g0036 a0001c0002t0001g0046 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0016g0055 a0002c0004t0001g0001 a0004c0006t0001g0013	14	64	0.2188	-6	c.187 others(25): Show c.1877-8121_1877-8116delTATACT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124644905	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG01069.hp2 others(20): Show HG00423.hp1 HG00423.hp2 HG01069.hp2 HG01070.hp1 HG02257.hp1 HG02451.hp1 HG02886.hp1 HG02886.hp2 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03704.hp1 NA18906.hp1 NA19000.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0004 others(2): Show a0001c0001 a0001c0002 a0002c0004 a0003c0007 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0015 a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0011 a0001c0002t0012 a0001c0002t0016 a0002c0004t0001 a0003c0007t0001 a0004c0006t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0043 others(20): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0043 a0001c0001t0002g0019 a0001c0001t0002g0024 a0001c0001t0002g0042 a0001c0001t0002g0048 a0001c0001t0003g0006 a0001c0001t0003g0057 a0001c0001t0015g0036 a0001c0002t0001g0007 a0001c0002t0001g0046 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0003g0004 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0011g0029 a0001c0002t0012g0018 a0001c0002t0016g0055 a0002c0004t0001g0001 a0003c0007t0001g0017 a0004c0006t0001g0013	23	64	0.3594	-6	c.187 others(25): Show c.1877-2836_1877-2831delACACAC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124655537	TTATATA TTATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG01069.hp1 others(17): Show HG00423.hp1 HG00423.hp2 HG01069.hp1 HG02145.hp1 HG02257.hp1 HG02717.hp1 HG02723.hp1 HG02886.hp1 HG02886.hp2 HG02897.hp2 HG02922.hp1 HG03098.hp2 HG03130.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 NA18906.hp1 NA19000.hp2 NA19043.hp1 NA20129.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0003c0007 others(1): Show a0001c0001 a0001c0002 a0003c0007 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0010 a0001c0002t0011 a0001c0002t0012 a0003c0007t0001 a0004c0006t0001	a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0002g0019 others(17): Show a0001c0001t0001g0010 a0001c0001t0001g0033 a0001c0001t0002g0019 a0001c0001t0002g0024 a0001c0001t0003g0006 a0001c0001t0004g0052 a0001c0002t0001g0003 a0001c0002t0001g0005 a0001c0002t0001g0007 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0003g0004 a0001c0002t0003g0056 a0001c0002t0010g0032 a0001c0002t0011g0029 a0001c0002t0012g0018 a0003c0007t0001g0017 a0004c0006t0001g0013	20	64	0.3125	-6	c.207 others(25): Show c.2077+7597_2077+7602delATATAT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124674503	TTCTTTC TTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03704.hp1 HG02145.hp2 HG03704.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0008 a0001c0001 a0002c0008	a0001c0001t0002 a0002c0008t0001 a0001c0001t0002 a0002c0008t0001	a0001c0001t0002g0048 a0002c0008t0001g0038 a0001c0001t0002g0048 a0002c0008t0001g0038	2	64	0.0313	-6	c.207 others(27): Show c.2077+26553_2077+26558delCTTTCT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124685759	TGTGCGC TGTGCGC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03453.hp2 NA19240.hp1 HG02451.hp1 HG03453.hp2 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0001 a0001c0002t0004	a0001c0002t0001g0046 a0001c0002t0004g0044 a0001c0002t0004g0047 a0001c0002t0001g0046 a0001c0002t0004g0044 a0001c0002t0004g0047	3	64	0.0469	-6	c.207 others(27): Show c.2077+37803_2077+37808delTGCGCG	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124706746	CAAGAAG CAAGAAG	C C	intron_variant intron_variant	MODIFIER	HG02897.hp2 NA20129.hp2 HG02897.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0024 a0001c0001t0006g0025 a0001c0001t0002g0024 a0001c0001t0006g0025	2	64	0.0313	-6	c.207 others(27): Show c.2078-40437_2078-40432delAAGAAG	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124707039	AAGGAGG AAGGAGG	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02723.hp2 HG02922.hp2 others(2): Show HG02145.hp2 HG02723.hp2 HG02922.hp2 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0008 a0001c0001 a0001c0002 a0002c0008	a0001c0001t0002 a0001c0002t0001 a0001c0002t0007 others(1): Show a0001c0001t0002 a0001c0002t0001 a0001c0002t0007 a0002c0008t0001	a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0002t0001g0064 others(2): Show a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0002t0001g0064 a0001c0002t0007g0009 a0002c0008t0001g0038	5	64	0.0781	-6	c.207 others(27): Show c.2078-40172_2078-40167delGAGGAG	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124707140	GGAAGAA GGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02293.hp1 NA18906.hp1 NA18906.hp2 others(1): Show HG02293.hp1 NA18906.hp1 NA18906.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 a0001c0002t0011	a0001c0001t0002g0050 a0001c0001t0004g0053 a0001c0002t0001g0062 others(1): Show a0001c0001t0002g0050 a0001c0001t0004g0053 a0001c0002t0001g0062 a0001c0002t0011g0029	4	64	0.0625	-6	c.207 others(27): Show c.2078-40028_2078-40023delGAAGAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124713237	TTCTTTC TTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01891.hp1 HG02698.hp2 others(6): Show HG00423.hp2 HG01891.hp1 HG02698.hp2 HG02723.hp2 HG02970.hp1 HG02970.hp2 HG03098.hp1 HG03225.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0013 a0001c0001t0017 others(3): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0017 a0001c0002t0002 a0001c0002t0007 a0001c0002t0019	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0020 others(6): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0020 a0001c0001t0013g0041 a0001c0001t0017g0012 a0001c0002t0002g0030 a0001c0002t0002g0060 a0001c0002t0007g0009 a0001c0002t0019g0051	9	64	0.1406	-6	c.207 others(27): Show c.2078-33984_2078-33979delCTTTCT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar

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