Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
ARSF_chrX_3036471_3117727	3036943	ATATTAT ATATTAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp1 NA20805.hp1 HG01069.hp1 HG01071.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0057	3	193	0.0155	-6	c.-47 others(17): Show c.-4748_-4743delTATTAT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4527		chrX	TogoVar
ARSF_chrX_3036471_3117727	3036945	ATTATAT ATTATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG01099.hp1 others(29): Show HG00280.hp1 HG00323.hp2 HG01099.hp1 HG01106.hp1 HG01255.hp1 HG01496.hp1 HG01943.hp1 HG01978.hp1 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02602.hp1 HG02647.hp1 HG02896.hp1 HG03704.hp1 HG03942.hp1 HG04199.hp1 NA18612.hp1 NA18943.hp1 NA18945.hp1 NA18952.hp1 NA18957.hp2 NA18961.hp1 NA18974.hp1 NA18982.hp1 NA18989.hp1 NA18990.hp1 NA19070.hp1 NA19074.hp1 NA19082.hp1 NA19086.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0043 a0001c0001t0001g0048 others(29): Show a0001c0001t0001g0003 a0001c0001t0001g0043 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0098 a0001c0001t0001g0114 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0155 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0170 a0001c0001t0001g0171	32	193	0.1658	-6	c.-47 others(17): Show c.-4746_-4741delTTATAT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4525		chrX	TogoVar
ARSF_chrX_3036471_3117727	3036991	ATATTAT ATATTAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	193	0.0052	-6	c.-47 others(17): Show c.-4700_-4695delTATTAT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4479		chrX	TogoVar
ARSF_chrX_3036471_3117727	3036993	ATTATAT ATTATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG02300.hp1 HG04228.hp1 others(1): Show HG00099.hp2 HG02300.hp1 HG04228.hp1 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0005c0006	a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 a0005c0006t0001	a0001c0001t0001g0003 a0001c0002t0001g0126 a0002c0004t0001g0127 others(1): Show a0001c0001t0001g0003 a0001c0002t0001g0126 a0002c0004t0001g0127 a0005c0006t0001g0128	4	193	0.0207	-6	c.-46 others(17): Show c.-4698_-4693delTTATAT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4477		chrX	TogoVar
ARSF_chrX_3036471_3117727	3037001	TATAAAA TATAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0006 a0006	a0006c0022 a0006c0022	a0006c0022t0001 a0006c0022t0001	a0006c0022t0001g0174 a0006c0022t0001g0174	1	193	0.0052	-6	c.-46 others(17): Show c.-4690_-4685delATAAAA		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4469		chrX	TogoVar
ARSF_chrX_3036471_3117727	3037039	ATTATAT ATTATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	193	0.0052	-6	c.-46 others(17): Show c.-4652_-4647delTTATAT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4431		chrX	TogoVar
ARSF_chrX_3036471_3117727	3037273	TTAAAAA TTAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	193	0.0052	-6	c.-44 others(17): Show c.-4418_-4413delTAAAAA		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding					4197		chrX	TogoVar
ARSF_chrX_3036471_3117727	3070938	GGTGTGT GGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02257.hp2 HG02965.hp1 others(2): Show HG00738.hp1 HG02257.hp2 HG02965.hp1 HG03225.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0003 a0001c0001 a0001c0007 a0002c0003	a0001c0001t0001 a0001c0007t0003 a0002c0003t0001 a0001c0001t0001 a0001c0007t0003 a0002c0003t0001	a0001c0001t0001g0029 a0001c0001t0001g0044 a0001c0007t0003g0028 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0044 a0001c0007t0003g0028 a0001c0007t0003g0183 a0002c0003t0001g0047	5	193	0.0259	-6	c.12- others(21): Show c.12-1059_12-1054delGTGTGT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding	2/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
ARSF_chrX_3036471_3117727	3071291	TTTGTTG TTTGTTG	T T	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	193	0.0052	-6	c.12- others(19): Show c.12-711_12-706delGTTGTT		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding	2/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
ARSF_chrX_3036471_3117727	3098047	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01256.hp1 others(2): Show HG01070.hp1 HG01071.hp2 HG01256.hp1 HG02622.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0001 a0001c0001t0001 a0002c0004t0001	a0001c0001t0001g0032 a0001c0001t0001g0045 a0002c0004t0001g0087 others(2): Show a0001c0001t0001g0032 a0001c0001t0001g0045 a0002c0004t0001g0087 a0002c0004t0001g0181 a0002c0004t0001g0182	5	193	0.0259	-6	c.968 others(23): Show c.968-3004_968-2999delCACACA		ARSF	ENSG00000062096.15	transcript	ENST00000381127.6	protein_coding	7/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
ARSG_chr17_68286495_68425814	68328856	GGTCTTA GGTCTTA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00673.hp2 HG01069.hp1 others(20): Show HG00099.hp2 HG00673.hp2 HG01069.hp1 HG01071.hp1 HG01106.hp1 HG01109.hp2 HG01168.hp1 HG02055.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02809.hp1 HG02896.hp1 HG02970.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03453.hp2 HG03710.hp1 NA18522.hp1 NA19240.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0005 a0001c0009 others(5): Show a0001c0001 a0001c0005 a0001c0009 a0001c0013 a0001c0024 a0002c0002 a0003c0004 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0001c0009t0001 a0001c0013t0001 a0001c0024t0001 a0002c0002t0001 a0002c0002t0003 a0003c0004t0002 a0004c0006t0001	a0001c0001t0001g0158 a0001c0001t0001g0169 a0001c0001t0002g0100 others(20): Show a0001c0001t0001g0158 a0001c0001t0001g0169 a0001c0001t0002g0100 a0001c0005t0001g0166 a0001c0005t0001g0167 a0001c0005t0001g0168 a0001c0009t0001g0049 a0001c0013t0001g0045 a0001c0013t0001g0046 a0001c0024t0001g0011 a0002c0002t0001g0032 a0002c0002t0001g0060 a0002c0002t0001g0165 a0002c0002t0001g0205 a0002c0002t0001g0270 a0002c0002t0001g0296 a0002c0002t0001g0304 a0002c0002t0003g0117 a0003c0004t0002g0291 a0004c0006t0001g0182 a0004c0006t0001g0201 a0004c0006t0001g0202 a0004c0006t0001g0203	23	304	0.0757	-6	c.219 others(25): Show c.219-14747_219-14742delGTCTTA		ARSG	ENSG00000141337.13	transcript	ENST00000621439.5	protein_coding	2/11						chr17	TogoVar
ARSG_chr17_68286495_68425814	68333631	AAATAAT AAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01891.hp1 HG02015.hp1 others(16): Show HG01361.hp2 HG01891.hp1 HG02015.hp1 HG02155.hp1 HG02155.hp2 HG02451.hp2 HG02572.hp2 HG02717.hp2 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp2 HG03491.hp1 HG03492.hp1 HG03669.hp1 NA18961.hp2 NA18970.hp1 NA19043.hp1 NA19065.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0005 others(7): Show a0001c0001 a0001c0003 a0001c0005 a0001c0025 a0001c0028 a0002c0002 a0003c0004 a0003c0010 a0004c0006 a0006c0008	a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 others(7): Show a0001c0001t0001 a0001c0003t0001 a0001c0005t0001 a0001c0025t0001 a0001c0028t0001 a0002c0002t0002 a0003c0004t0002 a0003c0010t0001 a0004c0006t0001 a0006c0008t0002	a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0135 others(16): Show a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0210 a0001c0001t0001g0213 a0001c0003t0001g0118 a0001c0003t0001g0120 a0001c0003t0001g0138 a0001c0005t0001g0012 a0001c0025t0001g0121 a0001c0028t0001g0242 a0002c0002t0002g0088 a0003c0004t0002g0091 a0003c0010t0001g0197 a0003c0010t0001g0198 a0004c0006t0001g0041 a0006c0008t0002g0191	19	304	0.0625	-6	c.219 others(23): Show c.219-9934_219-9929delTAATAA		ARSG	ENSG00000141337.13	transcript	ENST00000621439.5	protein_coding	2/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
ARSG_chr17_68286495_68425814	68387079	TCACACA TCACACA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00423.hp2 others(116): Show HG00099.hp1 HG00323.hp1 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01346.hp2 HG01515.hp1 HG01884.hp2 HG01978.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp2 HG02738.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03471.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG04115.hp1 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18747.hp1 NA18906.hp2 NA18944.hp2 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18961.hp1 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18978.hp1 NA18979.hp1 NA18985.hp2 NA19030.hp1 NA19060.hp1 NA19060.hp2 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19079.hp2 NA19081.hp2 NA19240.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0008 a0009 a0012	a0001c0001 a0001c0003 a0001c0005 others(11): Show a0001c0001 a0001c0003 a0001c0005 a0001c0009 a0001c0013 a0001c0026 a0001c0028 a0002c0002 a0004c0006 a0004c0012 a0005c0007 a0008c0032 a0009c0016 a0012c0019	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0001c0005t0001 a0001c0005t0002 a0001c0009t0001 a0001c0013t0001 a0001c0026t0001 a0001c0028t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0004c0006t0001 a0004c0006t0002 a0004c0012t0001 a0005c0007t0001 a0008c0032t0001 a0009c0016t0002 a0012c0019t0002	a0001c0001t0001g0008 a0001c0001t0001g0017 a0001c0001t0001g0019 others(116): Show a0001c0001t0001g0008 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0037 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0053 a0001c0001t0001g0068 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0195 a0001c0001t0001g0207 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0243 a0001c0001t0001g0256 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0287 a0001c0001t0001g0297 a0001c0001t0002g0067 a0001c0001t0002g0072 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0086 a0001c0001t0002g0093 a0001c0001t0002g0095 a0001c0001t0002g0107 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0148 a0001c0001t0002g0219 a0001c0001t0002g0245 a0001c0001t0002g0300 a0001c0003t0001g0058 a0001c0003t0001g0118 a0001c0003t0001g0120 a0001c0003t0001g0138 a0001c0003t0001g0189 a0001c0003t0001g0193 a0001c0003t0001g0199 a0001c0003t0001g0204 a0001c0003t0001g0262 a0001c0003t0002g0106 a0001c0003t0002g0143 a0001c0003t0002g0263 a0001c0003t0004g0206 a0001c0005t0001g0018 a0001c0005t0001g0043 a0001c0005t0001g0166 a0001c0005t0001g0167 a0001c0005t0001g0168 a0001c0005t0002g0094 a0001c0009t0001g0036 a0001c0009t0001g0049 a0001c0009t0001g0259 a0001c0013t0001g0035 a0001c0013t0001g0045 a0001c0013t0001g0046 a0001c0026t0001g0020 a0001c0028t0001g0242 a0002c0002t0001g0022 a0002c0002t0001g0027 a0002c0002t0001g0047 a0002c0002t0001g0130 a0002c0002t0001g0177 a0002c0002t0001g0178 a0002c0002t0001g0186 a0002c0002t0001g0229 a0002c0002t0001g0270 a0002c0002t0001g0285 a0002c0002t0001g0286 a0002c0002t0001g0296 a0002c0002t0001g0303 a0002c0002t0001g0304 a0002c0002t0002g0075 a0002c0002t0002g0090 a0002c0002t0002g0183 a0002c0002t0002g0216 a0002c0002t0002g0218 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0290 a0002c0002t0003g0117 a0004c0006t0001g0133 a0004c0006t0001g0173 a0004c0006t0001g0182 a0004c0006t0001g0201 a0004c0006t0001g0202 a0004c0006t0001g0258 a0004c0006t0002g0157 a0004c0006t0002g0226 a0004c0006t0002g0268 a0004c0012t0001g0257 a0005c0007t0001g0209 a0008c0032t0001g0292 a0009c0016t0002g0096 a0009c0016t0002g0136 a0012c0019t0002g0092	119	304	0.3915	-6	c.109 others(25): Show c.1091+1942_1091+1947delCACACA		ARSG	ENSG00000141337.13	transcript	ENST00000621439.5	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
ARSG_chr17_68286495_68425814	68417733	ATTTTTT ATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00642.hp1 HG00738.hp1 others(34): Show HG00609.hp2 HG00642.hp1 HG00738.hp1 HG01069.hp2 HG01071.hp2 HG01081.hp2 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01175.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01433.hp2 HG01496.hp2 HG01517.hp2 HG01884.hp2 HG02056.hp1 HG02257.hp1 HG02300.hp2 HG02451.hp2 HG02602.hp1 HG02647.hp2 HG03017.hp1 HG03225.hp1 HG03491.hp1 HG03492.hp1 HG03834.hp2 HG04199.hp2 HG04204.hp1 NA18946.hp2 NA19068.hp1 NA19079.hp2 NA19240.hp1 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0012	a0001c0001 a0001c0003 a0002c0002 others(3): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004 a0004c0006 a0012c0019	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0003t0002 a0002c0002t0001 a0002c0002t0002 a0003c0004t0002 a0004c0006t0002 a0012c0019t0002	a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0134 others(34): Show a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0169 a0001c0001t0001g0176 a0001c0001t0001g0207 a0001c0001t0001g0235 a0001c0001t0001g0243 a0001c0001t0001g0256 a0001c0001t0001g0277 a0001c0001t0001g0281 a0001c0001t0002g0067 a0001c0001t0002g0081 a0001c0001t0002g0107 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0142 a0001c0001t0002g0219 a0001c0001t0002g0245 a0001c0003t0001g0189 a0001c0003t0001g0204 a0001c0003t0002g0106 a0001c0003t0002g0143 a0002c0002t0001g0130 a0002c0002t0001g0229 a0002c0002t0001g0230 a0002c0002t0001g0238 a0002c0002t0001g0283 a0002c0002t0001g0296 a0002c0002t0001g0304 a0002c0002t0002g0075 a0003c0004t0002g0108 a0004c0006t0002g0226 a0012c0019t0002g0092	37	304	0.1217	-6	c.130 others(25): Show c.1304-2429_1304-2424delTTTTTT		ARSG	ENSG00000141337.13	transcript	ENST00000621439.5	protein_coding	11/11					INFO_REALIGN_3_PRIME	chr17	TogoVar
ARSH_chrX_3001546_3039111	3002792	TAAATTA TAAATTA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0001 a0001c0017t0001	a0001c0017t0001g0216 a0001c0017t0001g0216	1	248	0.0040	-6	c.-38 others(17): Show c.-3820_-3815delAAATTA		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					3753		chrX	TogoVar
ARSH_chrX_3001546_3039111	3026838	CTTTTCT CTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00741.hp1 HG01167.hp1 others(17): Show HG00099.hp2 HG00741.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp2 HG02572.hp1 HG02809.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG03130.hp1 HG03491.hp1 HG03492.hp1 HG03579.hp1 NA19043.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0002c0004 a0002c0006 others(1): Show a0001c0002 a0002c0004 a0002c0006 a0007c0010	a0001c0002t0002 a0001c0002t0006 a0002c0004t0002 others(2): Show a0001c0002t0002 a0001c0002t0006 a0002c0004t0002 a0002c0006t0002 a0007c0010t0002	a0001c0002t0002g0221 a0001c0002t0002g0222 a0001c0002t0002g0224 others(16): Show a0001c0002t0002g0221 a0001c0002t0002g0222 a0001c0002t0002g0224 a0001c0002t0002g0225 a0001c0002t0002g0226 a0001c0002t0002g0229 a0001c0002t0002g0231 a0001c0002t0002g0232 a0001c0002t0002g0233 a0001c0002t0002g0234 a0001c0002t0006g0093 a0001c0002t0006g0094 a0002c0004t0002g0013 a0002c0004t0002g0215 a0002c0004t0002g0217 a0002c0006t0002g0156 a0002c0006t0002g0159 a0002c0006t0002g0207 a0007c0010t0002g0182	20	248	0.0807	-6	c.103 others(23): Show c.1037-458_1037-453delCTTTTT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding	6/8					INFO_REALIGN_3_PRIME	chrX	TogoVar
ARSH_chrX_3001546_3039111	3031784	CATCATA CATCATA	C C	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0027 a0001c0001t0009g0027	1	248	0.0040	-6	c.132 others(25): Show c.1322-1231_1322-1226delCATAAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding	8/8					INFO_REALIGN_3_PRIME	chrX	TogoVar
ARSH_chrX_3001546_3039111	3036787	AAAATAT AAAATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0203 a0008c0009t0001g0203	1	248	0.0040	-6	c.34 others(17): Show c.3403_*3408delAAATAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2677		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036881	TATAATA TATAATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(137): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01346.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02486.hp1 HG02559.hp2 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03239.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18941.hp2 NA18944.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18955.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0003 a0009 others(1): Show a0001 a0003 a0009 a0011	a0001c0001 a0001c0002 a0001c0016 others(4): Show a0001c0001 a0001c0002 a0001c0016 a0001c0017 a0003c0003 a0009c0011 a0011c0012	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0002t0001 a0001c0016t0001 a0001c0017t0001 a0003c0003t0001 a0009c0011t0001 a0011c0012t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(129): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0149 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0206 a0001c0001t0001g0210 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0003g0120 a0001c0001t0003g0143 a0001c0001t0003g0151 a0001c0001t0009g0027 a0001c0002t0001g0118 a0001c0002t0001g0119 a0001c0016t0001g0029 a0001c0017t0001g0216 a0003c0003t0001g0067 a0003c0003t0001g0133 a0003c0003t0001g0154 a0003c0003t0001g0187 a0009c0011t0001g0061 a0011c0012t0001g0196	140	248	0.5645	-6	c.34 others(17): Show c.3497_*3502delATAATA		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2771		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036895	ATTATAT ATTATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(139): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01346.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02486.hp1 HG02559.hp2 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02965.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03239.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18747.hp1 NA18941.hp2 NA18944.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19072.hp1 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0003 a0009 others(1): Show a0001 a0003 a0009 a0011	a0001c0001 a0001c0002 a0001c0016 others(4): Show a0001c0001 a0001c0002 a0001c0016 a0001c0017 a0003c0003 a0009c0011 a0011c0012	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0002t0001 a0001c0016t0001 a0001c0017t0001 a0003c0003t0001 a0009c0011t0001 a0011c0012t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(131): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0149 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0206 a0001c0001t0001g0210 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0003g0120 a0001c0001t0003g0143 a0001c0001t0003g0151 a0001c0001t0009g0027 a0001c0002t0001g0118 a0001c0002t0001g0119 a0001c0016t0001g0029 a0001c0017t0001g0216 a0003c0003t0001g0067 a0003c0003t0001g0133 a0003c0003t0001g0154 a0003c0003t0001g0187 a0009c0011t0001g0061 a0011c0012t0001g0196	142	248	0.5726	-6	c.35 others(17): Show c.3511_*3516delTTATAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2785		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036931	TATAATA TATAATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01070.hp1 HG01358.hp1 others(9): Show HG00735.hp2 HG01070.hp1 HG01358.hp1 HG01496.hp2 HG02027.hp1 HG02486.hp1 HG02683.hp2 HG02698.hp1 HG02738.hp1 HG03490.hp1 NA18983.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0039 others(9): Show a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0039 a0001c0001t0001g0060 a0001c0001t0001g0098 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0160 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0003g0120	12	248	0.0484	-6	c.35 others(17): Show c.3547_*3552delATAATA		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2821		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036943	ATATTAT ATATTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 NA20805.hp1 HG01069.hp1 HG01071.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0206 a0001c0001t0001g0011 a0001c0001t0001g0206	3	248	0.0121	-6	c.35 others(17): Show c.3559_*3564delTATTAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2833		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036945	ATTATAT ATTATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00408.hp1 others(37): Show HG00280.hp1 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00639.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01496.hp1 HG01943.hp1 HG01981.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02293.hp2 HG02647.hp1 HG03704.hp1 HG03942.hp1 HG04199.hp1 HG06807.hp2 NA18612.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp1 NA18952.hp1 NA18961.hp1 NA18968.hp2 NA18982.hp1 NA18989.hp1 NA18990.hp1 NA19002.hp2 NA19070.hp1 NA19081.hp1 NA19086.hp1 NA19089.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 a0001c0001t0001 a0001c0001t0007 a0001c0001t0010	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 others(35): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0103 a0001c0001t0001g0106 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0132 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0167 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0189 a0001c0001t0001g0193 a0001c0001t0001g0235 a0001c0001t0007g0015 a0001c0001t0010g0155	40	248	0.1613	-6	c.35 others(17): Show c.3561_*3566delTTATAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2835		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036991	ATATTAT ATATTAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	248	0.0040	-6	c.36 others(17): Show c.3607_*3612delTATTAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2881		chrX	TogoVar
ARSH_chrX_3001546_3039111	3036993	ATTATAT ATTATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG04184.hp2 HG04228.hp1 others(1): Show HG00099.hp1 HG04184.hp2 HG04228.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0139 a0001c0001t0001g0144 others(1): Show a0001c0001t0001g0037 a0001c0001t0001g0139 a0001c0001t0001g0144 a0001c0001t0001g0177	4	248	0.0161	-6	c.36 others(17): Show c.3609_*3614delTTATAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2883		chrX	TogoVar
ARSH_chrX_3001546_3039111	3037001	TATAAAA TATAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	248	0.0040	-6	c.36 others(17): Show c.3617_*3622delATAAAA		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2891		chrX	TogoVar
ARSH_chrX_3001546_3039111	3037036	TATATTA TATATTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0139 a0001c0001t0001g0139	1	248	0.0040	-6	c.36 others(17): Show c.3652_*3657delATATTA		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2926		chrX	TogoVar
ARSH_chrX_3001546_3039111	3037039	ATTATAT ATTATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	248	0.0040	-6	c.36 others(17): Show c.3655_*3660delTTATAT		ARSH	ENSG00000205667.3	transcript	ENST00000381130.3	protein_coding					2929		chrX	TogoVar
ARSJ_chr4_113895284_113984647	113924070	TATATAA TATATAA	T T	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01993.hp1 HG02145.hp2 others(13): Show HG00544.hp1 HG01993.hp1 HG02145.hp2 HG02735.hp2 HG02738.hp1 HG03239.hp1 HG03704.hp2 HG03834.hp1 HG04115.hp1 NA18957.hp2 NA18984.hp2 NA19063.hp1 NA19064.hp1 NA19077.hp1 NA19080.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0086 a0001c0001t0002g0130 a0001c0001t0002g0176 others(13): Show a0001c0001t0002g0086 a0001c0001t0002g0130 a0001c0001t0002g0176 a0001c0001t0002g0183 a0001c0001t0002g0190 a0001c0001t0002g0206 a0001c0001t0002g0220 a0001c0001t0002g0228 a0001c0001t0004g0247 a0001c0001t0004g0253 a0001c0001t0004g0274 a0001c0001t0004g0278 a0001c0001t0004g0281 a0001c0001t0004g0285 a0001c0001t0004g0309 a0001c0001t0004g0310	16	350	0.0457	-6	c.399 others(25): Show c.399-20401_399-20396delTTATAT		ARSJ	ENSG00000180801.14	transcript	ENST00000315366.8	protein_coding	1/1						chr4	TogoVar
ARSL_chrX_2929521_2969341	2935686	TCTTTTC TCTTTTC	T T	intron_variant intron_variant	MODIFIER	HG02015.hp1 NA18959.hp1 NA18989.hp1 others(3): Show HG02015.hp1 NA18959.hp1 NA18989.hp1 NA18991.hp1 NA19072.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0097 a0001c0001t0001g0123 others(3): Show a0001c0001t0001g0064 a0001c0001t0001g0097 a0001c0001t0001g0123 a0001c0001t0001g0175 a0001c0001t0001g0276 a0001c0001t0001g0289	6	328	0.0183	-6	c.141 others(23): Show c.1412-502_1412-497delGAAAAG		ARSL	ENSG00000157399.17	transcript	ENST00000381134.9	protein_coding	10/10						chrX	TogoVar
ARSL_chrX_2929521_2969341	2945005	TAAGAAG TAAGAAG	T T	intron_variant intron_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	328	0.0031	-6	c.991 others(21): Show c.991+987_991+992delCTTCTT		ARSL	ENSG00000157399.17	transcript	ENST00000381134.9	protein_coding	7/10						chrX	TogoVar
ARSL_chrX_2929521_2969341	2946322	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG02647.hp1 others(2): Show HG01070.hp1 HG01071.hp2 HG02647.hp1 HG02965.hp1 HG03041.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0022 a0003c0005t0002g0023 a0003c0005t0002g0027 others(2): Show a0003c0005t0002g0022 a0003c0005t0002g0023 a0003c0005t0002g0027 a0003c0005t0002g0032 a0003c0005t0002g0050	5	328	0.0152	-6	c.855 others(21): Show c.855-194_855-189delAAAAAA		ARSL	ENSG00000157399.17	transcript	ENST00000381134.9	protein_coding	6/10						chrX	TogoVar
ARSL_chrX_2929521_2969341	2960268	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01891.hp1 HG02896.hp1 others(6): Show HG01109.hp1 HG01891.hp1 HG02896.hp1 HG02897.hp1 HG03195.hp1 HG03486.hp2 NA18906.hp2 NA20129.hp2 NA20300.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0002 a0002c0003t0009 a0002c0003t0001 a0002c0003t0002 a0002c0003t0009	a0002c0003t0001g0209 a0002c0003t0002g0020 a0002c0003t0002g0021 others(6): Show a0002c0003t0001g0209 a0002c0003t0002g0020 a0002c0003t0002g0021 a0002c0003t0002g0037 a0002c0003t0002g0041 a0002c0003t0002g0047 a0002c0003t0002g0048 a0002c0003t0002g0049 a0002c0003t0009g0040	9	328	0.0274	-6	c.23+ others(19): Show c.23+104_23+109delTTTTTT		ARSL	ENSG00000157399.17	transcript	ENST00000381134.9	protein_coding	2/10						chrX	TogoVar
ART1_chr11_3640128_3669416	3640567	CTTTTTT CTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 HG01081.hp2 HG02451.hp1 others(4): Show HG00609.hp2 HG01081.hp2 HG02451.hp1 HG03225.hp2 NA18969.hp2 NA19001.hp2 NA19077.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0005	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0003c0003t0002 a0004c0005t0001	a0001c0001t0001g0293 a0002c0002t0001g0178 a0002c0002t0001g0180 others(4): Show a0001c0001t0001g0293 a0002c0002t0001g0178 a0002c0002t0001g0180 a0002c0002t0001g0228 a0003c0003t0001g0064 a0003c0003t0002g0061 a0004c0005t0001g0303	7	394	0.0178	-6	c.-46 others(17): Show c.-4664_-4659delTTTTTT		ART1	ENSG00000129744.3	transcript	ENST00000250693.2	protein_coding					4560		chr11	TogoVar
ART4_chr12_14820569_14848526	14830536	AGTGTGT AGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp2 HG00733.hp2 others(35): Show HG00323.hp2 HG00438.hp2 HG00733.hp2 HG01081.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01256.hp1 HG01358.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp2 HG02004.hp1 HG02027.hp2 HG02165.hp1 HG02257.hp2 HG02602.hp2 HG02615.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG03041.hp2 HG03453.hp1 HG03491.hp2 HG04184.hp1 NA18906.hp1 NA18954.hp1 NA18964.hp1 NA18977.hp1 NA18981.hp1 NA18988.hp1 NA18993.hp1 NA19009.hp1 NA19043.hp2 NA19058.hp1 NA19062.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0002c0002 a0002c0004 others(3): Show a0001c0001 a0002c0002 a0002c0004 a0003c0003 a0004c0012 a0005c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0002c0002t0004 a0002c0002t0008 a0002c0004t0001 a0002c0004t0008 a0003c0003t0003 a0004c0012t0003 a0005c0006t0002 a0005c0006t0003	a0001c0001t0001g0201 a0001c0001t0004g0257 a0001c0001t0005g0130 others(31): Show a0001c0001t0001g0201 a0001c0001t0004g0257 a0001c0001t0005g0130 a0001c0001t0005g0134 a0001c0001t0005g0136 a0001c0001t0005g0138 a0001c0001t0005g0139 a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0149 a0001c0001t0005g0151 a0001c0001t0005g0152 a0001c0001t0005g0154 a0001c0001t0005g0156 a0001c0001t0005g0157 a0001c0001t0008g0131 a0001c0001t0008g0219 a0002c0002t0004g0091 a0002c0002t0004g0093 a0002c0002t0008g0046 a0002c0004t0001g0013 a0002c0004t0008g0110 a0002c0004t0008g0117 a0002c0004t0008g0118 a0002c0004t0008g0119 a0003c0003t0003g0019 a0003c0003t0003g0020 a0003c0003t0003g0164 a0003c0003t0003g0226 a0003c0003t0003g0237 a0004c0012t0003g0112 a0005c0006t0002g0015 a0005c0006t0003g0120 a0005c0006t0003g0122	38	380	0.1000	-6	c.854 others(23): Show c.854-1080_854-1075delACACAC		ART4	ENSG00000111339.12	transcript	ENST00000228936.6	protein_coding	2/2						chr12	TogoVar
ART4_chr12_14820569_14848526	14830649	GTATATA GTATATA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00423.hp1 others(42): Show HG00099.hp1 HG00323.hp1 HG00423.hp1 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01081.hp1 HG01106.hp2 HG01192.hp1 HG01261.hp2 HG01358.hp2 HG01516.hp1 HG01978.hp2 HG01981.hp1 HG02145.hp2 HG02155.hp1 HG02293.hp1 HG02622.hp2 HG02698.hp1 HG02735.hp2 HG02895.hp1 HG02965.hp1 HG02976.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03540.hp2 HG03704.hp2 HG03942.hp2 HG04228.hp1 HG06807.hp1 NA18944.hp1 NA18952.hp2 NA18957.hp1 NA18964.hp2 NA18988.hp1 NA19010.hp1 NA19055.hp2 NA19063.hp1 NA19065.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0010c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0017 a0001c0001t0018 a0002c0002t0001 a0002c0002t0002 a0002c0002t0004 a0002c0002t0016 a0003c0003t0003 a0003c0003t0022 a0010c0013t0001	a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0129 others(39): Show a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0129 a0001c0001t0001g0135 a0001c0001t0001g0140 a0001c0001t0001g0167 a0001c0001t0001g0189 a0001c0001t0001g0198 a0001c0001t0001g0243 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0277 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0318 a0001c0001t0002g0183 a0001c0001t0002g0315 a0001c0001t0004g0231 a0001c0001t0005g0130 a0001c0001t0005g0136 a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0143 a0001c0001t0006g0042 a0001c0001t0006g0261 a0001c0001t0011g0037 a0001c0001t0011g0038 a0001c0001t0017g0199 a0001c0001t0018g0225 a0002c0002t0001g0007 a0002c0002t0001g0050 a0002c0002t0002g0065 a0002c0002t0002g0101 a0002c0002t0004g0066 a0002c0002t0004g0104 a0002c0002t0016g0064 a0003c0003t0003g0232 a0003c0003t0022g0039 a0010c0013t0001g0334	45	380	0.1184	-6	c.854 others(23): Show c.854-1193_854-1188delTATATA		ART4	ENSG00000111339.12	transcript	ENST00000228936.6	protein_coding	2/2						chr12	TogoVar
ART5_chr11_3633512_3646992	3640567	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02809.hp1 HG03225.hp1 others(5): Show HG00609.hp1 HG02809.hp1 HG03225.hp1 HG03491.hp2 NA18969.hp1 NA18974.hp2 NA19001.hp2 NA19077.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0002c0002t0005 others(1): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0005 a0003c0003t0004	a0001c0001t0001g0018 a0002c0002t0001g0105 a0002c0002t0005g0038 others(1): Show a0001c0001t0001g0018 a0002c0002t0001g0105 a0002c0002t0005g0038 a0003c0003t0004g0065	8	454	0.0176	-6	c.58- others(19): Show c.58-202_58-197delAAAAAA		ART5	ENSG00000167311.14	transcript	ENST00000397068.8	protein_coding	1/3						chr11	TogoVar
ARV1_chr1_230974094_231005733	230984363	CGTGTGT CGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG03688.hp2 NA19003.hp2 NA19075.hp2 HG03688.hp2 NA19003.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0096 a0001c0001t0001g0030 a0001c0001t0001g0096	3	402	0.0075	-6	c.175 others(23): Show c.175-3924_175-3919delGTGTGT		ARV1	ENSG00000173409.14	transcript	ENST00000310256.7	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr1	TogoVar
AR_chrX_67539021_67735619	67545316	TGCAGCA TGCAGCA	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00280.hp1 HG01074.hp1 HG01106.hp1 others(15): Show HG00280.hp1 HG01074.hp1 HG01106.hp1 HG02615.hp2 HG02735.hp1 HG02818.hp1 HG03209.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03688.hp1 HG03834.hp2 NA18906.hp1 NA18906.hp2 NA18977.hp1 NA18984.hp1 NA20129.hp2	a0007 a0008 a0016 others(3): Show a0007 a0008 a0016 a0049 a0050 a0051	a0007c0006 a0008c0005 a0016c0024 others(4): Show a0007c0006 a0008c0005 a0016c0024 a0016c0058 a0049c0055 a0050c0056 a0051c0057	a0007c0006t0001 a0007c0006t0003 a0007c0006t0009 others(14): Show a0007c0006t0001 a0007c0006t0003 a0007c0006t0009 a0007c0006t0026 a0007c0006t0059 a0008c0005t0003 a0008c0005t0006 a0008c0005t0010 a0008c0005t0033 a0008c0005t0044 a0008c0005t0046 a0016c0024t0010 a0016c0024t0011 a0016c0058t0012 a0049c0055t0001 a0050c0056t0021 a0051c0057t0038	a0007c0006t0001g0102 a0007c0006t0003g0068 a0007c0006t0009g0074 others(15): Show a0007c0006t0001g0102 a0007c0006t0003g0068 a0007c0006t0009g0074 a0007c0006t0009g0093 a0007c0006t0026g0094 a0007c0006t0059g0069 a0008c0005t0003g0003 a0008c0005t0006g0118 a0008c0005t0010g0003 a0008c0005t0033g0148 a0008c0005t0044g0121 a0008c0005t0046g0136 a0016c0024t0010g0115 a0016c0024t0011g0004 a0016c0058t0012g0107 a0049c0055t0001g0125 a0050c0056t0021g0162 a0051c0057t0038g0165	18	193	0.0933	-6	c.234 others(13): Show c.234_239delGCAGCA	p.Gln others(11): Show p.Gln79_Gln80del	AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	1/8	1360/10667	234/2763	78/920		INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67546514	TGGCGGC TGGCGGC	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00735.hp2 HG02451.hp2 HG02615.hp1 others(8): Show HG00735.hp2 HG02451.hp2 HG02615.hp1 HG02723.hp1 HG02723.hp2 HG02896.hp1 HG02922.hp1 HG03209.hp1 HG03486.hp1 HG06807.hp1 NA20300.hp2	a0017 a0036 a0038 others(6): Show a0017 a0036 a0038 a0042 a0050 a0053 a0063 a0068 a0072	a0017c0017 a0036c0036 a0038c0038 others(6): Show a0017c0017 a0036c0036 a0038c0038 a0042c0042 a0050c0056 a0053c0060 a0063c0073 a0068c0083 a0072c0033	a0017c0017t0006 a0017c0017t0019 a0017c0017t0035 others(8): Show a0017c0017t0006 a0017c0017t0019 a0017c0017t0035 a0036c0036t0004 a0038c0038t0047 a0042c0042t0005 a0050c0056t0021 a0053c0060t0039 a0063c0073t0067 a0068c0083t0037 a0072c0033t0021	a0017c0017t0006g0151 a0017c0017t0019g0160 a0017c0017t0035g0159 others(8): Show a0017c0017t0006g0151 a0017c0017t0019g0160 a0017c0017t0035g0159 a0036c0036t0004g0112 a0038c0038t0047g0113 a0042c0042t0005g0129 a0050c0056t0021g0162 a0053c0060t0039g0133 a0063c0073t0067g0169 a0068c0083t0037g0152 a0072c0033t0021g0163	11	193	0.0570	-6	c.141 others(15): Show c.1415_1420delGCGGCG	p.Gly others(13): Show p.Gly472_Gly473del	AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	1/8	2541/10667	1415/2763	472/920		INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67562356	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03486.hp1 HG03516.hp2 HG03209.hp1 HG03486.hp1 HG03516.hp2	a0050 a0051 a0072 a0050 a0051 a0072	a0050c0056 a0051c0057 a0072c0033 a0050c0056 a0051c0057 a0072c0033	a0050c0056t0021 a0051c0057t0038 a0072c0033t0021 a0050c0056t0021 a0051c0057t0038 a0072c0033t0021	a0050c0056t0021g0162 a0051c0057t0038g0165 a0072c0033t0021g0163 a0050c0056t0021g0162 a0051c0057t0038g0165 a0072c0033t0021g0163	3	193	0.0155	-6	c.161 others(27): Show c.1616+15628_1616+15633delGTGTGT		AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	1/7					INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67604198	ATGTGTG ATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02818.hp1 HG02886.hp1 others(1): Show HG02630.hp1 HG02818.hp1 HG02886.hp1 HG03486.hp1	a0008 a0022 a0043 others(1): Show a0008 a0022 a0043 a0072	a0008c0005 a0022c0021 a0043c0043 others(1): Show a0008c0005 a0022c0021 a0043c0043 a0072c0033	a0008c0005t0033 a0022c0021t0034 a0043c0043t0040 others(1): Show a0008c0005t0033 a0022c0021t0034 a0043c0043t0040 a0072c0033t0021	a0008c0005t0033g0148 a0022c0021t0034g0147 a0043c0043t0040g0154 others(1): Show a0008c0005t0033g0148 a0022c0021t0034g0147 a0043c0043t0040g0154 a0072c0033t0021g0163	4	193	0.0207	-6	c.161 others(27): Show c.1617-39016_1617-39011delGTGTGT		AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	1/7					INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67680073	TATTTTG TATTTTG	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0047 a0047	a0047c0048 a0047c0048	a0047c0048t0027 a0047c0048t0027	a0047c0048t0027g0123 a0047c0048t0027g0123	1	193	0.0052	-6	c.176 others(25): Show c.1769-5931_1769-5926delGATTTT		AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	2/7					INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67701674	TCACACA TCACACA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00642.hp1 HG00741.hp1 others(13): Show HG00280.hp1 HG00642.hp1 HG00741.hp1 HG01109.hp1 HG01192.hp1 HG02257.hp1 HG02451.hp2 HG02572.hp1 HG02723.hp1 HG02723.hp2 HG02922.hp1 HG02976.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp1 NA19043.hp1	a0001 a0009 a0012 others(9): Show a0001 a0009 a0012 a0013 a0017 a0018 a0049 a0052 a0053 a0056 a0064 a0068	a0001c0001 a0009c0025 a0012c0011 others(9): Show a0001c0001 a0009c0025 a0012c0011 a0013c0012 a0017c0017 a0018c0066 a0049c0055 a0052c0059 a0053c0060 a0056c0061 a0064c0074 a0068c0083	a0001c0001t0025 a0009c0025t0004 a0012c0011t0019 others(11): Show a0001c0001t0025 a0009c0025t0004 a0012c0011t0019 a0013c0012t0006 a0017c0017t0006 a0017c0017t0019 a0017c0017t0035 a0018c0066t0004 a0049c0055t0001 a0052c0059t0029 a0053c0060t0039 a0056c0061t0010 a0064c0074t0032 a0068c0083t0037	a0001c0001t0025g0166 a0009c0025t0004g0150 a0009c0025t0004g0164 others(13): Show a0001c0001t0025g0166 a0009c0025t0004g0150 a0009c0025t0004g0164 a0012c0011t0019g0126 a0013c0012t0006g0124 a0013c0012t0006g0128 a0017c0017t0006g0151 a0017c0017t0019g0160 a0017c0017t0035g0159 a0018c0066t0004g0149 a0049c0055t0001g0125 a0052c0059t0029g0134 a0053c0060t0039g0133 a0056c0061t0010g0161 a0064c0074t0032g0180 a0068c0083t0037g0152	16	193	0.0829	-6	c.188 others(25): Show c.1886-9697_1886-9692delCACACA		AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	3/7					INFO_REALIGN_3_PRIME	chrX	TogoVar
AR_chrX_67539021_67735619	67728574	AATATAT AATATAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00735.hp1 HG01106.hp1 HG02698.hp1 others(2): Show HG00735.hp1 HG01106.hp1 HG02698.hp1 HG03491.hp2 HG03704.hp1	a0002 a0003 a0016 others(1): Show a0002 a0003 a0016 a0031	a0002c0002 a0003c0004 a0016c0058 others(1): Show a0002c0002 a0003c0004 a0016c0058 a0031c0082	a0002c0002t0012 a0003c0004t0012 a0016c0058t0012 others(1): Show a0002c0002t0012 a0003c0004t0012 a0016c0058t0012 a0031c0082t0012	a0002c0002t0012g0189 a0002c0002t0012g0190 a0003c0004t0012g0103 others(2): Show a0002c0002t0012g0189 a0002c0002t0012g0190 a0003c0004t0012g0103 a0016c0058t0012g0107 a0031c0082t0012g0021	5	193	0.0259	-6	c.47 others(17): Show c.4769_*4774delTATATA		AR	ENSG00000169083.18	transcript	ENST00000374690.9	protein_coding	8/8				4769	INFO_REALIGN_3_PRIME	chrX	TogoVar
AS3MT_chr10_102864470_102906899	102878296	TTAATTA TTAATTA	T T	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG03834.hp1 NA18940.hp2 others(11): Show HG02135.hp1 HG03834.hp1 NA18940.hp2 NA18943.hp2 NA18945.hp2 NA18946.hp2 NA18953.hp1 NA18963.hp2 NA18974.hp1 NA18977.hp2 NA18983.hp1 NA18986.hp2 NA18989.hp1 NA19057.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0016 a0001c0001t0022 others(2): Show a0001c0001t0008 a0001c0001t0016 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026	a0001c0001t0008g0034 a0001c0001t0008g0035 a0001c0001t0008g0042 others(11): Show a0001c0001t0008g0034 a0001c0001t0008g0035 a0001c0001t0008g0042 a0001c0001t0008g0043 a0001c0001t0008g0045 a0001c0001t0008g0048 a0001c0001t0008g0049 a0001c0001t0008g0050 a0001c0001t0008g0051 a0001c0001t0016g0044 a0001c0001t0016g0052 a0001c0001t0022g0016 a0001c0001t0025g0046 a0001c0001t0026g0047	14	362	0.0387	-6	c.611 others(19): Show c.611-80_611-75delATTATA		AS3MT	ENSG00000214435.9	transcript	ENST00000369880.8	protein_coding	7/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
AS3MT_chr10_102864470_102906899	102885495	ATTTTTT ATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01074.hp1 HG01109.hp1 others(9): Show HG01070.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01175.hp1 HG02602.hp2 HG02886.hp1 HG02886.hp2 HG04228.hp2 NA18947.hp2 NA19007.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0191 others(9): Show a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0191 a0001c0001t0001g0199 a0001c0001t0001g0210 a0001c0001t0001g0257 a0001c0001t0001g0319 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0334 a0001c0001t0001g0336 a0001c0001t0009g0266	12	362	0.0332	-6	c.886 others(23): Show c.886-5002_886-4997delTTTTTT		AS3MT	ENSG00000214435.9	transcript	ENST00000369880.8	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
AS3MT_chr10_102864470_102906899	102888851	CTATATA CTATATA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp1 others(81): Show HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00544.hp2 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01109.hp2 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp2 HG01952.hp2 HG01981.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02071.hp1 HG02129.hp2 HG02257.hp1 HG02273.hp1 HG02486.hp1 HG02523.hp1 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02922.hp2 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03486.hp2 HG03492.hp2 HG03540.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 NA18747.hp2 NA18939.hp1 NA18941.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18951.hp1 NA18960.hp2 NA18968.hp1 NA18971.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp1 NA18983.hp2 NA18991.hp1 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19030.hp1 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19064.hp1 NA19065.hp1 NA19070.hp1 NA19077.hp2 NA19078.hp1 NA19084.hp2 NA19087.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0009 others(1): Show a0001c0001 a0001c0006 a0001c0009 a0001c0010	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(10): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0001t0027 a0001c0001t0028 a0001c0006t0006 a0001c0009t0013 a0001c0010t0001	a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0014 others(77): Show a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0196 a0001c0001t0001g0200 a0001c0001t0001g0210 a0001c0001t0001g0217 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0288 a0001c0001t0001g0296 a0001c0001t0001g0302 a0001c0001t0001g0305 a0001c0001t0001g0311 a0001c0001t0001g0314 a0001c0001t0001g0320 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0343 a0001c0001t0005g0006 a0001c0001t0005g0088 a0001c0001t0005g0089 a0001c0001t0005g0090 a0001c0001t0005g0091 a0001c0001t0005g0092 a0001c0001t0005g0094 a0001c0001t0005g0095 a0001c0001t0005g0096 a0001c0001t0005g0097 a0001c0001t0005g0098 a0001c0001t0005g0099 a0001c0001t0005g0100 a0001c0001t0006g0015 a0001c0001t0006g0172 a0001c0001t0006g0173 a0001c0001t0006g0174 a0001c0001t0009g0198 a0001c0001t0009g0208 a0001c0001t0009g0263 a0001c0001t0009g0264 a0001c0001t0009g0265 a0001c0001t0009g0266 a0001c0001t0010g0146 a0001c0001t0011g0201 a0001c0001t0011g0211 a0001c0001t0011g0310 a0001c0001t0013g0181 a0001c0001t0013g0192 a0001c0001t0013g0193 a0001c0001t0013g0215 a0001c0001t0020g0168 a0001c0001t0027g0240 a0001c0001t0028g0087 a0001c0006t0006g0176 a0001c0009t0013g0262 a0001c0010t0001g0212	84	362	0.2320	-6	c.886 others(23): Show c.886-1667_886-1662delATATAT		AS3MT	ENSG00000214435.9	transcript	ENST00000369880.8	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
AS3MT_chr10_102864470_102906899	102888877	ATATATT ATATATT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 HG02055.hp2 others(3): Show HG00558.hp1 HG00558.hp2 HG02055.hp2 NA18992.hp2 NA19056.hp2 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0004 a0001c0005t0001 a0001c0001t0001 a0001c0001t0004 a0001c0005t0001	a0001c0001t0001g0216 a0001c0001t0001g0275 a0001c0001t0001g0309 others(3): Show a0001c0001t0001g0216 a0001c0001t0001g0275 a0001c0001t0001g0309 a0001c0001t0001g0312 a0001c0001t0004g0027 a0001c0005t0001g0308	6	362	0.0166	-6	c.886 others(23): Show c.886-1665_886-1660delATATTT		AS3MT	ENSG00000214435.9	transcript	ENST00000369880.8	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
ASAH2B_chr10_50734936_50764255	50754891	GGTGTGT GGTGTGT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00642.hp2 HG01243.hp2 HG02280.hp1 others(3): Show HG00642.hp2 HG01243.hp2 HG02280.hp1 HG02723.hp2 HG03139.hp1 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0029 a0001c0001t0061 a0002c0002t0028 others(1): Show a0001c0001t0029 a0001c0001t0061 a0002c0002t0028 a0002c0002t0062	a0001c0001t0029g0078 a0001c0001t0029g0080 a0001c0001t0061g0003 others(2): Show a0001c0001t0029g0078 a0001c0001t0029g0080 a0001c0001t0061g0003 a0002c0002t0028g0017 a0002c0002t0062g0052	6	414	0.0145	-6	c.19 others(15): Show c.192_*197delGTGTGT		ASAH2B	ENSG00000204147.11	transcript	ENST00000647317.2	protein_coding	6/6				192	INFO_REALIGN_3_PRIME	chr10	TogoVar

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