Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATG10_chr5_81967023_82261133	82218052	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02559.hp1 HG01496.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0165 a0001c0001t0001g0159 a0001c0001t0001g0165	2	226	0.0089	-6	c.454 others(25): Show c.454-34480_454-34475delCACACA	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG12_chr5_115823200_115846565	115832567	CTTTCTT CTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00609.hp2 others(100): Show HG00099.hp2 HG00280.hp2 HG00609.hp2 HG00738.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01106.hp2 HG01167.hp1 HG01169.hp1 HG01257.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01943.hp2 HG01975.hp1 HG02004.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp2 HG02165.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp2 HG02523.hp1 HG02622.hp2 HG03041.hp1 HG03041.hp2 HG03453.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp2 NA18939.hp1 NA18942.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp2 NA18955.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18965.hp2 NA18967.hp1 NA18971.hp1 NA18974.hp1 NA18977.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18989.hp1 NA18992.hp2 NA18993.hp2 NA18995.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19054.hp2 NA19055.hp2 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19080.hp2 NA19085.hp1 NA19087.hp1 NA19240.hp2 NA20752.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(10): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0018 a0001c0001t0022 a0001c0001t0029 a0001c0001t0034 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042	a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0012 others(26): Show a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0012 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0025 a0001c0001t0002g0034 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0126 a0001c0001t0002g0133 a0001c0001t0002g0149 a0001c0001t0002g0154 a0001c0001t0002g0163 a0001c0001t0005g0006 a0001c0001t0005g0171 a0001c0001t0010g0029 a0001c0001t0010g0075 a0001c0001t0010g0151 a0001c0001t0018g0159 a0001c0001t0022g0046 a0001c0001t0029g0063 a0001c0001t0034g0069 a0001c0001t0036g0160 a0001c0001t0038g0168 a0001c0001t0039g0166 a0001c0001t0040g0161 a0001c0001t0041g0143 a0001c0001t0042g0170	103	402	0.2562	-6	c.363 others(19): Show c.363+29_363+34delAAGAAA	ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding	3/3			chr5	TogoVar
ATG12_chr5_115823200_115846565	115832571	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02717.hp2 HG02922.hp1 others(5): Show HG02559.hp1 HG02717.hp2 HG02922.hp1 HG02976.hp1 HG03130.hp1 HG03486.hp2 HG03516.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0008 a0001c0001t0024 a0001c0001t0006 a0001c0001t0008 a0001c0001t0024	a0001c0001t0006g0011 a0001c0001t0006g0061 a0001c0001t0008g0057 others(1): Show a0001c0001t0006g0011 a0001c0001t0006g0061 a0001c0001t0008g0057 a0001c0001t0024g0058	8	402	0.0199	-6	c.363 others(19): Show c.363+25_363+30delAAAAAA	ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding	3/3			chr5	TogoVar
ATG12_chr5_115823200_115846565	115845836	CAAAAAA CAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(100): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00609.hp2 HG00639.hp1 HG00735.hp2 HG01069.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01517.hp2 HG01928.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02559.hp2 HG02622.hp2 HG02683.hp2 HG02698.hp1 HG02735.hp2 HG02738.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03225.hp1 HG03491.hp1 HG03654.hp1 HG03669.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18939.hp1 NA18946.hp2 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp2 NA18955.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18965.hp2 NA18971.hp1 NA18974.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18992.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp2 NA19007.hp1 NA19010.hp1 NA19011.hp1 NA19054.hp2 NA19055.hp2 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19076.hp1 NA19076.hp2 NA19240.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0018 a0001c0001t0022 a0001c0001t0029 a0001c0001t0033 a0001c0001t0036 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0004c0004t0015	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0024 others(44): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0024 a0001c0001t0001g0045 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0153 a0001c0001t0001g0172 a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0025 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0142 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0162 a0001c0001t0005g0006 a0001c0001t0005g0157 a0001c0001t0005g0171 a0001c0001t0006g0032 a0001c0001t0007g0028 a0001c0001t0007g0164 a0001c0001t0007g0167 a0001c0001t0008g0033 a0001c0001t0010g0029 a0001c0001t0011g0043 a0001c0001t0011g0139 a0001c0001t0011g0140 a0001c0001t0016g0062 a0001c0001t0018g0159 a0001c0001t0018g0165 a0001c0001t0022g0046 a0001c0001t0029g0063 a0001c0001t0033g0065 a0001c0001t0036g0160 a0001c0001t0038g0168 a0001c0001t0039g0166 a0001c0001t0040g0161 a0001c0001t0041g0143 a0001c0001t0042g0170 a0004c0004t0015g0052	103	402	0.2562	-6	c.-42 others(17): Show c.-4290_-4285delTTTTTT	ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding		4272		chr5	TogoVar
ATG13_chr11_46612553_46679518	46622076	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01358.hp2 HG01981.hp2 others(9): Show HG00438.hp2 HG01358.hp2 HG01981.hp2 HG02040.hp2 HG02109.hp1 HG02132.hp1 HG03130.hp1 NA18990.hp2 NA19090.hp2 NA19091.hp2 NA20805.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 a0001c0001 a0001c0004 a0001c0006	a0001c0001t0001 a0001c0001t0006 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0004t0001 a0001c0006t0003	a0001c0001t0001g0078 a0001c0001t0001g0082 a0001c0001t0001g0120 others(9): Show a0001c0001t0001g0078 a0001c0001t0001g0082 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0166 a0001c0001t0001g0179 a0001c0001t0001g0209 a0001c0001t0006g0121 a0001c0001t0006g0188 a0001c0001t0006g0189 a0001c0004t0001g0177 a0001c0006t0003g0187	12	218	0.0551	-6	c.-70 others(23): Show c.-70+4233_-70+4238delATATAT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46622123	ATATATT ATATATT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00609.hp2 HG00099.hp1 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0112 a0001c0001t0003g0113 a0001c0001t0001g0112 a0001c0001t0003g0113	2	218	0.0092	-6	c.-70 others(23): Show c.-70+4237_-70+4242delATTTAT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46646457	TTTTTTG TTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp1 others(80): Show HG00140.hp1 HG00140.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp2 HG01070.hp1 HG01074.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01358.hp1 HG01361.hp1 HG01515.hp1 HG01516.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp2 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02486.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02809.hp1 HG02896.hp2 HG02897.hp2 HG03017.hp2 HG03098.hp1 HG03239.hp1 HG03239.hp2 HG03491.hp2 HG03688.hp2 HG03704.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18964.hp1 NA18971.hp2 NA18978.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18990.hp2 NA19010.hp1 NA19056.hp1 NA19056.hp2 NA19068.hp1 NA19083.hp1 NA19084.hp2 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0006 a0002c0005 others(1): Show a0001c0001 a0001c0006 a0002c0005 a0003c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0015 a0001c0001t0016 a0001c0001t0023 a0001c0006t0003 a0002c0005t0001 a0003c0007t0001	a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 others(79): Show a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0103 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0120 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0149 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0209 a0001c0001t0003g0075 a0001c0001t0003g0081 a0001c0001t0003g0093 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0003g0104 a0001c0001t0003g0106 a0001c0001t0003g0110 a0001c0001t0003g0113 a0001c0001t0003g0118 a0001c0001t0003g0126 a0001c0001t0003g0129 a0001c0001t0003g0136 a0001c0001t0003g0148 a0001c0001t0003g0157 a0001c0001t0003g0169 a0001c0001t0003g0175 a0001c0001t0003g0183 a0001c0001t0003g0185 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0208 a0001c0001t0006g0121 a0001c0001t0006g0186 a0001c0001t0006g0188 a0001c0001t0006g0189 a0001c0001t0006g0192 a0001c0001t0007g0002 a0001c0001t0007g0064 a0001c0001t0015g0077 a0001c0001t0016g0079 a0001c0001t0023g0101 a0001c0006t0003g0187 a0002c0005t0001g0124 a0003c0007t0001g0107	83	218	0.3807	-6	c.270 others(21): Show c.270+487_270+492delTTTTTG	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	5/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG13_chr11_46612553_46679518	46663265	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02622.hp1 HG02723.hp1 others(4): Show HG02559.hp2 HG02622.hp1 HG02723.hp1 HG03041.hp1 HG03139.hp2 HG03209.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0142 a0001c0001t0001g0145 others(4): Show a0001c0001t0001g0063 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0196 a0001c0001t0001g0206	7	218	0.0321	-6	c.790 others(21): Show c.790-715_790-710delAAAAAA	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	11/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55364727	CTTTTTT CTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00323.hp1 others(35): Show HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00642.hp1 HG00673.hp2 HG01069.hp2 HG01071.hp1 HG01243.hp1 HG01358.hp1 HG01433.hp2 HG01517.hp2 HG02071.hp2 HG02135.hp2 HG02572.hp2 HG03490.hp1 HG03491.hp1 HG03654.hp2 HG03688.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 NA18939.hp2 NA18941.hp2 NA18946.hp2 NA18955.hp1 NA18962.hp2 NA18963.hp1 NA18970.hp2 NA18983.hp2 NA18992.hp1 NA18993.hp2 NA19010.hp1 NA19060.hp1 NA19062.hp1 NA19079.hp2 NA19080.hp1 NA20752.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0013 a0002c0008	a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 others(6): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0017 a0001c0002t0002 a0001c0002t0004 a0001c0002t0016 a0001c0004t0002 a0001c0013t0034 a0002c0008t0020	a0001c0001t0002g0133 a0001c0001t0002g0138 a0001c0001t0002g0139 others(33): Show a0001c0001t0002g0133 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0147 a0001c0001t0002g0162 a0001c0001t0004g0123 a0001c0001t0004g0128 a0001c0001t0017g0137 a0001c0001t0017g0146 a0001c0002t0002g0004 a0001c0002t0002g0039 a0001c0002t0002g0041 a0001c0002t0002g0042 a0001c0002t0002g0044 a0001c0002t0002g0046 a0001c0002t0002g0048 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0058 a0001c0002t0002g0222 a0001c0002t0002g0223 a0001c0002t0004g0060 a0001c0002t0016g0043 a0001c0002t0016g0045 a0001c0004t0002g0030 a0001c0004t0002g0047 a0001c0004t0002g0051 a0001c0004t0002g0052 a0001c0004t0002g0053 a0001c0004t0002g0057 a0001c0004t0002g0103 a0001c0013t0034g0178 a0002c0008t0020g0002	38	366	0.1038	-6	c.48 others(17): Show c.4886_*4891delAAAAAA	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding		1663		chr14	TogoVar
ATG16L1_chr2_233246673_233300669	233258001	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02258.hp2 HG02965.hp2 others(9): Show HG02055.hp1 HG02258.hp2 HG02965.hp2 HG03098.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0001t0011 a0001c0005t0003 a0001c0001t0003 a0001c0001t0011 a0001c0005t0003	a0001c0001t0003g0007 a0001c0001t0003g0171 a0001c0001t0003g0181 others(5): Show a0001c0001t0003g0007 a0001c0001t0003g0171 a0001c0001t0003g0181 a0001c0001t0011g0014 a0001c0005t0003g0092 a0001c0005t0003g0182 a0001c0005t0003g0183 a0001c0005t0003g0184	12	354	0.0339	-6	c.209 others(23): Show c.209+1817_209+1822delAAAAAA	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
ATG16L1_chr2_233246673_233300669	233258012	AAAAAAT AAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02647.hp1 HG02895.hp2 others(5): Show HG01109.hp1 HG02647.hp1 HG02895.hp2 HG02897.hp2 HG02976.hp2 HG03540.hp1 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 others(5): Show a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0004g0044	8	354	0.0226	-6	c.209 others(23): Show c.209+1819_209+1824delAAAATA	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
ATG16L1_chr2_233246673_233300669	233266198	GGGAGGC GGGAGGC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(128): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00408.hp1 HG00558.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp2 HG01346.hp2 HG01496.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01978.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp2 HG02083.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp2 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02300.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 HG04184.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18939.hp1 NA18947.hp1 NA18948.hp1 NA18950.hp2 NA18951.hp1 NA18954.hp2 NA18957.hp1 NA18963.hp2 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18981.hp2 NA18983.hp2 NA18987.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA19000.hp1 NA19005.hp2 NA19010.hp2 NA19043.hp2 NA19060.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp2 NA19086.hp2 NA19088.hp2 NA19089.hp1 NA19240.hp2 NA20129.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0005 a0002c0002 others(3): Show a0001c0001 a0001c0005 a0002c0002 a0002c0004 a0002c0008 a0004c0009	a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 others(11): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0011 a0001c0005t0003 a0002c0002t0002 a0002c0002t0005 a0002c0002t0006 a0002c0002t0010 a0002c0002t0013 a0002c0002t0014 a0002c0002t0018 a0002c0004t0002 a0002c0008t0005 a0004c0009t0002	a0001c0001t0003g0009 a0001c0001t0003g0045 a0001c0001t0003g0046 others(111): Show a0001c0001t0003g0009 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0115 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0147 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0004g0044 a0001c0001t0004g0194 a0001c0001t0004g0195 a0001c0001t0011g0014 a0001c0005t0003g0182 a0001c0005t0003g0183 a0001c0005t0003g0184 a0002c0002t0002g0023 a0002c0002t0002g0024 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0028 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0199 a0002c0002t0002g0200 a0002c0002t0002g0201 a0002c0002t0002g0210 a0002c0002t0002g0213 a0002c0002t0002g0215 a0002c0002t0002g0216 a0002c0002t0002g0218 a0002c0002t0002g0219 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0222 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0225 a0002c0002t0002g0226 a0002c0002t0002g0227 a0002c0002t0002g0228 a0002c0002t0002g0229 a0002c0002t0002g0231 a0002c0002t0002g0232 a0002c0002t0002g0233 a0002c0002t0002g0234 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0242 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0247 a0002c0002t0002g0249 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0258 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0263 a0002c0002t0002g0264 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0276 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0005g0012 a0002c0002t0005g0013 a0002c0002t0005g0025 a0002c0002t0005g0029 a0002c0002t0005g0030 a0002c0002t0005g0031 a0002c0002t0005g0035 a0002c0002t0005g0211 a0002c0002t0005g0212 a0002c0002t0005g0214 a0002c0002t0005g0230 a0002c0002t0005g0235 a0002c0002t0005g0240 a0002c0002t0005g0241 a0002c0002t0005g0248 a0002c0002t0005g0256 a0002c0002t0005g0257 a0002c0002t0005g0259 a0002c0002t0005g0260 a0002c0002t0005g0277 a0002c0002t0005g0278 a0002c0002t0005g0279 a0002c0002t0006g0275 a0002c0002t0010g0217 a0002c0002t0010g0283 a0002c0002t0013g0265 a0002c0002t0014g0255 a0002c0002t0018g0189 a0002c0004t0002g0204 a0002c0004t0002g0205 a0002c0004t0002g0206 a0002c0004t0002g0207 a0002c0004t0002g0208 a0002c0004t0002g0209 a0002c0008t0005g0031 a0004c0009t0002g0266	131	354	0.3701	-6	c.641 others(23): Show c.641+1082_641+1087delAGGCGG	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
ATG16L1_chr2_233246673_233300669	233296647	GTATGTA GTATGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp1 HG01517.hp1 HG04115.hp1 others(1): Show HG01516.hp1 HG01517.hp1 HG04115.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0020 a0001c0001t0003g0164 a0001c0001t0003g0177 a0001c0001t0003g0020 a0001c0001t0003g0164 a0001c0001t0003g0177	4	354	0.0113	-6	c.22 others(17): Show c.2298_*2303delTATGTA	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding		979		chr2	TogoVar
ATG16L1_chr2_233246673_233300669	233297403	CCTTTTT CCTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG02647.hp1 HG02895.hp2 others(5): Show HG01109.hp1 HG02647.hp1 HG02895.hp2 HG02897.hp2 HG03540.hp1 HG06807.hp1 NA18906.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 others(5): Show a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0150	8	354	0.0226	-6	c.30 others(17): Show c.3054_*3059delCTTTTT	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding		1735		chr2	TogoVar
ATG2B_chr14_96274195_96368341	96327230	CAATAAT CAATAAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(258): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01891.hp1 HG01928.hp2 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18952.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp2 NA18991.hp2 NA18994.hp2 NA19001.hp2 NA19002.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp2 NA19088.hp1 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(19): Show a0001 a0002 a0004 a0005 a0006 a0007 a0009 a0010 a0011 a0012 a0014 a0016 a0019 a0020 a0021 a0022 a0023 a0024 a0025 a0026 a0027 a0028	a0001c0002 a0001c0003 a0001c0005 others(28): Show a0001c0002 a0001c0003 a0001c0005 a0001c0011 a0001c0025 a0001c0026 a0001c0032 a0001c0035 a0002c0001 a0004c0006 a0004c0041 a0005c0008 a0005c0010 a0006c0007 a0007c0009 a0009c0018 a0010c0016 a0011c0017 a0012c0020 a0014c0019 a0016c0033 a0019c0034 a0020c0029 a0021c0039 a0022c0037 a0023c0036 a0024c0028 a0025c0027 a0026c0038 a0027c0040 a0028c0031	a0001c0002t0001 a0001c0002t0026 a0001c0002t0051 others(68): Show a0001c0002t0001 a0001c0002t0026 a0001c0002t0051 a0001c0002t0052 a0001c0002t0053 a0001c0002t0054 a0001c0002t0055 a0001c0002t0057 a0001c0002t0059 a0001c0002t0060 a0001c0002t0061 a0001c0002t0062 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0016 a0001c0003t0020 a0001c0003t0023 a0001c0003t0027 a0001c0003t0031 a0001c0003t0032 a0001c0003t0033 a0001c0003t0035 a0001c0003t0037 a0001c0003t0044 a0001c0003t0045 a0001c0003t0046 a0001c0005t0005 a0001c0011t0003 a0001c0025t0001 a0001c0026t0001 a0001c0032t0056 a0001c0035t0034 a0002c0001t0002 a0002c0001t0003 a0002c0001t0004 a0002c0001t0006 a0002c0001t0014 a0002c0001t0019 a0002c0001t0028 a0002c0001t0040 a0002c0001t0041 a0002c0001t0042 a0002c0001t0047 a0002c0001t0048 a0004c0006t0010 a0004c0006t0013 a0004c0041t0063 a0005c0008t0005 a0005c0008t0012 a0005c0008t0021 a0005c0010t0012 a0006c0007t0008 a0007c0009t0002 a0009c0018t0005 a0010c0016t0004 a0011c0017t0001 a0012c0020t0006 a0014c0019t0001 a0016c0033t0003 a0019c0034t0014 a0020c0029t0001 a0021c0039t0005 a0022c0037t0043 a0023c0036t0002 a0024c0028t0058 a0025c0027t0008 a0026c0038t0006 a0027c0040t0006 a0028c0031t0001	a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0258 others(245): Show a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0258 a0001c0002t0001g0260 a0001c0002t0001g0261 a0001c0002t0001g0263 a0001c0002t0001g0264 a0001c0002t0001g0265 a0001c0002t0001g0270 a0001c0002t0001g0271 a0001c0002t0001g0272 a0001c0002t0001g0275 a0001c0002t0001g0278 a0001c0002t0001g0279 a0001c0002t0001g0280 a0001c0002t0001g0281 a0001c0002t0001g0282 a0001c0002t0001g0283 a0001c0002t0001g0284 a0001c0002t0001g0285 a0001c0002t0001g0286 a0001c0002t0001g0287 a0001c0002t0001g0288 a0001c0002t0001g0290 a0001c0002t0001g0291 a0001c0002t0001g0292 a0001c0002t0001g0293 a0001c0002t0001g0294 a0001c0002t0001g0295 a0001c0002t0001g0297 a0001c0002t0001g0298 a0001c0002t0001g0299 a0001c0002t0001g0300 a0001c0002t0001g0301 a0001c0002t0001g0302 a0001c0002t0001g0303 a0001c0002t0001g0304 a0001c0002t0001g0305 a0001c0002t0001g0308 a0001c0002t0001g0309 a0001c0002t0001g0311 a0001c0002t0001g0312 a0001c0002t0001g0313 a0001c0002t0001g0314 a0001c0002t0001g0315 a0001c0002t0001g0316 a0001c0002t0001g0317 a0001c0002t0001g0318 a0001c0002t0001g0319 a0001c0002t0001g0322 a0001c0002t0001g0324 a0001c0002t0001g0328 a0001c0002t0001g0329 a0001c0002t0026g0010 a0001c0002t0051g0257 a0001c0002t0052g0330 a0001c0002t0053g0268 a0001c0002t0054g0306 a0001c0002t0055g0320 a0001c0002t0057g0267 a0001c0002t0059g0259 a0001c0002t0060g0266 a0001c0002t0061g0276 a0001c0002t0062g0327 a0001c0003t0002g0214 a0001c0003t0003g0008 a0001c0003t0003g0009 a0001c0003t0003g0108 a0001c0003t0003g0200 a0001c0003t0003g0201 a0001c0003t0003g0202 a0001c0003t0003g0203 a0001c0003t0003g0204 a0001c0003t0003g0205 a0001c0003t0003g0208 a0001c0003t0003g0209 a0001c0003t0003g0210 a0001c0003t0003g0212 a0001c0003t0003g0213 a0001c0003t0003g0215 a0001c0003t0003g0216 a0001c0003t0003g0218 a0001c0003t0003g0219 a0001c0003t0003g0220 a0001c0003t0003g0224 a0001c0003t0003g0225 a0001c0003t0003g0227 a0001c0003t0003g0228 a0001c0003t0003g0229 a0001c0003t0003g0230 a0001c0003t0003g0232 a0001c0003t0003g0233 a0001c0003t0003g0234 a0001c0003t0003g0239 a0001c0003t0005g0197 a0001c0003t0005g0198 a0001c0003t0005g0199 a0001c0003t0005g0206 a0001c0003t0005g0207 a0001c0003t0005g0238 a0001c0003t0011g0007 a0001c0003t0011g0109 a0001c0003t0011g0176 a0001c0003t0011g0226 a0001c0003t0016g0002 a0001c0003t0020g0222 a0001c0003t0020g0223 a0001c0003t0023g0243 a0001c0003t0023g0245 a0001c0003t0027g0017 a0001c0003t0031g0240 a0001c0003t0032g0195 a0001c0003t0033g0231 a0001c0003t0035g0247 a0001c0003t0037g0196 a0001c0003t0044g0242 a0001c0003t0045g0246 a0001c0003t0046g0244 a0001c0005t0005g0027 a0001c0011t0003g0018 a0001c0011t0003g0019 a0001c0011t0003g0020 a0001c0025t0001g0307 a0001c0026t0001g0269 a0001c0032t0056g0310 a0001c0035t0034g0221 a0002c0001t0002g0006 a0002c0001t0002g0110 a0002c0001t0002g0111 a0002c0001t0002g0120 a0002c0001t0002g0122 a0002c0001t0002g0124 a0002c0001t0002g0127 a0002c0001t0002g0132 a0002c0001t0002g0133 a0002c0001t0002g0134 a0002c0001t0002g0135 a0002c0001t0002g0136 a0002c0001t0002g0137 a0002c0001t0002g0139 a0002c0001t0002g0141 a0002c0001t0002g0142 a0002c0001t0002g0143 a0002c0001t0002g0146 a0002c0001t0002g0147 a0002c0001t0002g0148 a0002c0001t0002g0149 a0002c0001t0002g0150 a0002c0001t0002g0151 a0002c0001t0002g0152 a0002c0001t0002g0153 a0002c0001t0002g0155 a0002c0001t0002g0156 a0002c0001t0002g0157 a0002c0001t0002g0181 a0002c0001t0002g0182 a0002c0001t0002g0183 a0002c0001t0002g0184 a0002c0001t0002g0185 a0002c0001t0002g0186 a0002c0001t0002g0191 a0002c0001t0002g0235 a0002c0001t0003g0123 a0002c0001t0004g0112 a0002c0001t0004g0115 a0002c0001t0004g0116 a0002c0001t0004g0117 a0002c0001t0004g0118 a0002c0001t0004g0190 a0002c0001t0006g0113 a0002c0001t0006g0159 a0002c0001t0006g0160 a0002c0001t0006g0161 a0002c0001t0006g0162 a0002c0001t0006g0163 a0002c0001t0006g0164 a0002c0001t0006g0165 a0002c0001t0006g0167 a0002c0001t0006g0169 a0002c0001t0006g0170 a0002c0001t0006g0171 a0002c0001t0006g0172 a0002c0001t0006g0175 a0002c0001t0006g0177 a0002c0001t0006g0187 a0002c0001t0006g0193 a0002c0001t0014g0121 a0002c0001t0014g0144 a0002c0001t0014g0145 a0002c0001t0019g0014 a0002c0001t0019g0016 a0002c0001t0028g0015 a0002c0001t0040g0166 a0002c0001t0041g0189 a0002c0001t0042g0158 a0002c0001t0047g0188 a0002c0001t0048g0114 a0004c0006t0010g0333 a0004c0006t0010g0334 a0004c0006t0010g0335 a0004c0006t0010g0336 a0004c0006t0010g0337 a0004c0006t0010g0339 a0004c0006t0013g0013 a0004c0006t0013g0331 a0004c0006t0013g0332 a0004c0006t0013g0338 a0004c0041t0063g0340 a0005c0008t0005g0098 a0005c0008t0012g0096 a0005c0008t0012g0097 a0005c0008t0012g0099 a0005c0008t0021g0100 a0005c0008t0021g0101 a0005c0010t0012g0236 a0005c0010t0012g0237 a0006c0007t0008g0001 a0006c0007t0008g0080 a0006c0007t0008g0081 a0006c0007t0008g0082 a0006c0007t0008g0089 a0007c0009t0002g0119 a0007c0009t0002g0125 a0007c0009t0002g0128 a0007c0009t0002g0129 a0007c0009t0002g0131 a0007c0009t0002g0192 a0009c0018t0005g0083 a0009c0018t0005g0084 a0010c0016t0004g0077 a0010c0016t0004g0078 a0011c0017t0001g0289 a0011c0017t0001g0325 a0012c0020t0006g0178 a0012c0020t0006g0179 a0014c0019t0001g0273 a0014c0019t0001g0274 a0016c0033t0003g0211 a0019c0034t0014g0154 a0020c0029t0001g0296 a0021c0039t0005g0217 a0022c0037t0043g0173 a0023c0036t0002g0130 a0024c0028t0058g0326 a0025c0027t0008g0079 a0026c0038t0006g0174 a0027c0040t0006g0168 a0028c0031t0001g0277	261	356	0.7332	-6	c.216 others(25): Show c.2163+1111_2163+1116delATTATT	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	14/41			chr14	TogoVar
ATG2B_chr14_96274195_96368341	96339271	AGTGTGT AGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00642.hp2 HG01891.hp2 others(13): Show HG00099.hp1 HG00642.hp2 HG01891.hp2 HG02145.hp1 HG02717.hp1 HG02809.hp2 HG02895.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03486.hp2 NA19030.hp2	a0001 a0006 a0009 others(1): Show a0001 a0006 a0009 a0025	a0001c0003 a0001c0013 a0001c0024 others(3): Show a0001c0003 a0001c0013 a0001c0024 a0006c0007 a0009c0018 a0025c0027	a0001c0003t0005 a0001c0013t0005 a0001c0013t0022 others(4): Show a0001c0003t0005 a0001c0013t0005 a0001c0013t0022 a0001c0024t0006 a0006c0007t0008 a0009c0018t0005 a0025c0027t0008	a0001c0003t0005g0199 a0001c0013t0005g0091 a0001c0013t0022g0085 others(10): Show a0001c0003t0005g0199 a0001c0013t0005g0091 a0001c0013t0022g0085 a0001c0013t0022g0090 a0001c0024t0006g0092 a0006c0007t0008g0001 a0006c0007t0008g0080 a0006c0007t0008g0081 a0006c0007t0008g0082 a0006c0007t0008g0089 a0009c0018t0005g0083 a0009c0018t0005g0084 a0025c0027t0008g0079	16	356	0.0449	-6	c.924 others(23): Show c.924+2245_924+2250delACACAC	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	6/41			chr14	TogoVar
ATG2B_chr14_96274195_96368341	96340209	TTGTGTG TTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp2 NA18986.hp2 others(3): Show HG00558.hp1 HG00621.hp2 NA18986.hp2 NA18990.hp2 NA19002.hp1 NA19012.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0004 a0002c0001t0004	a0002c0001t0004g0112 a0002c0001t0004g0115 a0002c0001t0004g0116 others(3): Show a0002c0001t0004g0112 a0002c0001t0004g0115 a0002c0001t0004g0116 a0002c0001t0004g0117 a0002c0001t0004g0118 a0002c0001t0004g0190	6	356	0.0169	-6	c.924 others(23): Show c.924+1307_924+1312delCACACA	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	6/41			chr14	TogoVar
ATG2B_chr14_96274195_96368341	96352662	TAAAGAA TAAAGAA	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02717.hp1 others(10): Show HG02055.hp1 HG02145.hp1 HG02717.hp1 HG02895.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03098.hp1 HG03139.hp2 HG03486.hp2 NA19030.hp2 NA19240.hp1	a0001 a0006 a0009 others(2): Show a0001 a0006 a0009 a0018 a0025	a0001c0002 a0006c0007 a0009c0018 others(2): Show a0001c0002 a0006c0007 a0009c0018 a0018c0023 a0025c0027	a0001c0002t0051 a0006c0007t0008 a0009c0018t0005 others(2): Show a0001c0002t0051 a0006c0007t0008 a0009c0018t0005 a0018c0023t0036 a0025c0027t0008	a0001c0002t0051g0257 a0006c0007t0008g0001 a0006c0007t0008g0080 others(7): Show a0001c0002t0051g0257 a0006c0007t0008g0001 a0006c0007t0008g0080 a0006c0007t0008g0081 a0006c0007t0008g0082 a0006c0007t0008g0089 a0009c0018t0005g0083 a0009c0018t0005g0084 a0018c0023t0036g0088 a0025c0027t0008g0079	13	356	0.0365	-6	c.163 others(23): Show c.163-5327_163-5322delTTCTTT	ATG2B	ENSG00000066739.12	transcript	ENST00000359933.6	protein_coding	1/41			chr14	TogoVar
ATG3_chr3_112527510_112566962	112536920	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01071.hp1 HG01167.hp2 others(7): Show HG00280.hp1 HG01071.hp1 HG01167.hp2 HG01256.hp1 HG02165.hp2 NA18956.hp2 NA19000.hp2 NA19001.hp1 NA19009.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0047 a0001c0001t0001g0049 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0052	10	376	0.0266	-6	c.667 others(21): Show c.667-324_667-319delTTTTTT	ATG3	ENSG00000144848.11	transcript	ENST00000283290.10	protein_coding	9/11			chr3	TogoVar
ATG4A_chrX_108086778_108159671	108141058	GTGTATA GTGTATA	G G	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG02257.hp1 HG02280.hp1 others(6): Show HG01257.hp1 HG02257.hp1 HG02280.hp1 HG02630.hp2 HG03209.hp1 HG03491.hp1 HG03492.hp1 HG03688.hp1 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0199 others(6): Show a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0216 a0002c0003t0001g0204 a0002c0003t0001g0205 a0002c0003t0001g0214	9	249	0.0361	-6	c.814 others(23): Show c.814+2869_814+2874delGTATAT	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
ATG4A_chrX_108086778_108159671	108141071	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01261.hp1 HG02630.hp1 others(7): Show HG01169.hp2 HG01261.hp1 HG02630.hp1 HG02818.hp2 HG03195.hp1 HG03453.hp1 NA19055.hp1 NA19062.hp1 NA19068.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0055 a0001c0001t0001g0059 others(7): Show a0001c0001t0001g0032 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0111 a0001c0001t0001g0135	10	249	0.0402	-6	c.814 others(23): Show c.814+2913_814+2918delATATAT	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
ATG4A_chrX_108086778_108159671	108148020	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG02027.hp1 NA18982.hp1 NA19058.hp1 HG02027.hp1 NA18982.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0065 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0065	3	249	0.0121	-6	c.815 others(23): Show c.815-2081_815-2076delATATAT	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
ATG4A_chrX_108086778_108159671	108155450	TCTTTGA TCTTTGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 HG01884.hp1 HG02895.hp1 others(3): Show HG01106.hp1 HG01884.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0143 a0001c0002t0001g0144 a0001c0002t0001g0145 others(3): Show a0001c0002t0001g0143 a0001c0002t0001g0144 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0148	6	249	0.0241	-6	c.17 others(17): Show c.1739_*1744delCTTTGA	ATG4A	ENSG00000101844.18	transcript	ENST00000372232.8	protein_coding		780		chrX	TogoVar
ATG4C_chr1_62779132_62870516	62788430	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00544.hp2 HG00621.hp1 others(43): Show HG00140.hp1 HG00544.hp2 HG00621.hp1 HG00738.hp1 HG01109.hp2 HG01255.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp1 HG01993.hp2 HG02004.hp2 HG02109.hp2 HG02129.hp1 HG02257.hp1 HG02257.hp2 HG02293.hp2 HG02300.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02630.hp2 HG02723.hp1 HG02738.hp2 HG02818.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp1 HG03130.hp2 HG03225.hp1 HG03453.hp1 HG03654.hp1 HG03704.hp1 HG03834.hp1 HG03927.hp1 NA18747.hp2 NA18906.hp1 NA19030.hp1 NA19043.hp1 NA19084.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0003t0002	a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 others(42): Show a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0002g0244 a0001c0001t0002g0248 a0001c0001t0005g0011 a0001c0001t0005g0254 a0001c0003t0002g0245 a0001c0003t0002g0246 a0001c0003t0002g0247	46	322	0.1429	-6	c.-69 others(23): Show c.-69+4182_-69+4187delACACAC	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62801958	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02559.hp1 HG02647.hp2 others(7): Show HG02486.hp1 HG02559.hp1 HG02647.hp2 HG02723.hp1 HG02922.hp1 HG03453.hp1 HG03471.hp2 HG03579.hp2 HG06807.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0011 a0001c0003t0002 a0001c0001t0001 a0001c0001t0011 a0001c0003t0002	a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 others(7): Show a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0011g0235 a0001c0003t0002g0245 a0001c0003t0002g0246 a0001c0003t0002g0247	10	322	0.0311	-6	c.-68 others(23): Show c.-68-1739_-68-1734delAAAAAA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62850854	GTATATA GTATATA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp2 HG01261.hp1 others(21): Show HG00558.hp1 HG00621.hp2 HG01261.hp1 HG02015.hp1 HG02027.hp2 HG02074.hp1 HG02155.hp2 HG02280.hp2 HG02486.hp2 HG02572.hp2 HG02976.hp2 HG03492.hp1 HG03516.hp1 NA18945.hp1 NA18966.hp1 NA18968.hp1 NA18978.hp2 NA18979.hp1 NA19000.hp1 NA19011.hp1 NA19077.hp2 NA19079.hp2 NA19082.hp1 NA19089.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0006 a0001c0001 a0002c0006	a0001c0001t0001 a0001c0001t0006 a0002c0006t0001 a0001c0001t0001 a0001c0001t0006 a0002c0006t0001	a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 others(20): Show a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0027 a0001c0001t0001g0039 a0001c0001t0001g0056 a0001c0001t0001g0060 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0076 a0001c0001t0001g0093 a0001c0001t0001g0097 a0001c0001t0001g0103 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0115 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0006g0063 a0002c0006t0001g0138	24	322	0.0745	-6	c.120 others(25): Show c.1209+9350_1209+9355delTATATA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62850897	TATATAC TATATAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01069.hp2 HG01123.hp1 others(12): Show HG00280.hp1 HG01069.hp2 HG01123.hp1 HG01243.hp1 HG01358.hp1 HG02055.hp1 HG02083.hp1 HG02155.hp1 HG02896.hp2 HG02897.hp1 HG04184.hp2 NA18522.hp2 NA18959.hp2 NA19005.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0120 a0001c0001t0002g0136 a0001c0001t0002g0155 others(11): Show a0001c0001t0002g0120 a0001c0001t0002g0136 a0001c0001t0002g0155 a0001c0001t0002g0226 a0001c0001t0002g0232 a0001c0001t0003g0127 a0001c0001t0003g0188 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0198 a0001c0001t0003g0210 a0001c0001t0004g0006	15	322	0.0466	-6	c.120 others(25): Show c.1209+9354_1209+9359delTACATA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62861576	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG03225.hp2 NA18945.hp1 others(5): Show HG02080.hp1 HG03225.hp2 NA18945.hp1 NA19000.hp1 NA19001.hp2 NA19077.hp2 NA19079.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0001g0046 a0001c0001t0001g0048 others(4): Show a0001c0001t0001g0003 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0068 a0001c0001t0001g0093 a0001c0001t0001g0097 a0001c0001t0002g0288	8	322	0.0248	-6	c.121 others(25): Show c.1210-2370_1210-2365delCACACA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4C_chr1_62779132_62870516	62861622	CACACAG CACACAG	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02896.hp1 HG03927.hp1 HG01070.hp1 HG02896.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0251 a0001c0001t0001g0253 a0001c0001t0001g0306 a0001c0001t0001g0251 a0001c0001t0001g0253 a0001c0001t0001g0306	3	322	0.0093	-6	c.121 others(25): Show c.1210-2368_1210-2363delCACAGA	ATG4C	ENSG00000125703.15	transcript	ENST00000317868.9	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATG4D_chr19_10538904_10558418	10548003	ATTTTTT ATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01109.hp2 HG01167.hp2 others(4): Show HG00423.hp2 HG01109.hp2 HG01167.hp2 HG01975.hp2 HG02155.hp2 NA18946.hp2 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0077 a0001c0001t0001g0087 others(2): Show a0001c0001t0001g0015 a0001c0001t0001g0077 a0001c0001t0001g0087 a0001c0001t0001g0139 a0001c0001t0001g0169	7	406	0.0172	-6	c.835 others(21): Show c.835+790_835+795delTTTTTT	ATG4D	ENSG00000130734.10	transcript	ENST00000309469.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr19	TogoVar
ATG5_chr6_106179476_106330760	106194528	CTTTTCT CTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00639.hp1 HG00673.hp1 others(35): Show HG00621.hp2 HG00639.hp1 HG00673.hp1 HG01123.hp1 HG01175.hp1 HG01346.hp2 HG01496.hp2 HG01884.hp1 HG01891.hp2 HG01943.hp2 HG02129.hp2 HG02135.hp2 HG02698.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03209.hp1 HG03490.hp2 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03942.hp2 HG06807.hp2 NA18942.hp1 NA18959.hp2 NA18971.hp2 NA18977.hp1 NA18981.hp2 NA19043.hp1 NA19054.hp2 NA19057.hp1 NA19058.hp2 NA19077.hp2 NA19240.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0001t0001 a0001c0001t0009 a0001c0001t0012	a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0101 others(35): Show a0001c0001t0001g0071 a0001c0001t0001g0075 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0331 a0001c0001t0001g0343 a0001c0001t0009g0330 a0001c0001t0012g0019	38	358	0.1062	-6	c.691 others(23): Show c.691+7438_691+7443delAGAAAA	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	7/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106246390	TCTCACA TCTCACA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp1 HG01109.hp2 others(44): Show HG00558.hp1 HG00621.hp1 HG01109.hp2 HG02056.hp2 HG02132.hp2 HG02135.hp1 HG02258.hp1 HG02523.hp1 HG02572.hp1 HG02895.hp1 HG03471.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18948.hp2 NA18951.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp1 NA18967.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp1 NA18975.hp1 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp1 NA18992.hp2 NA18993.hp1 NA18998.hp1 NA19002.hp1 NA19007.hp1 NA19011.hp1 NA19060.hp2 NA19070.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19091.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(41): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0057 a0001c0001t0001g0099 a0001c0001t0001g0188 a0001c0001t0001g0201 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0290 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0296	47	358	0.1313	-6	c.573 others(23): Show c.573+1754_573+1759delTGTGAG	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	6/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106246392	TCACACA TCACACA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02083.hp1 HG02132.hp1 others(6): Show HG00323.hp1 HG02083.hp1 HG02132.hp1 HG02965.hp1 HG02965.hp2 HG03491.hp2 HG03704.hp2 NA19062.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0135 a0001c0001t0001g0193 others(6): Show a0001c0001t0001g0089 a0001c0001t0001g0135 a0001c0001t0001g0193 a0001c0001t0001g0204 a0001c0001t0001g0213 a0001c0001t0001g0251 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0343	9	358	0.0251	-6	c.573 others(23): Show c.573+1752_573+1757delTGTGTG	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	6/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106274677	CTTTAGT CTTTAGT	C C	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18978.hp1 NA18983.hp1 others(5): Show NA18972.hp1 NA18978.hp1 NA18983.hp1 NA18990.hp1 NA18993.hp2 NA19060.hp1 NA19062.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0081 a0001c0001t0001g0135 a0001c0001t0001g0136 others(5): Show a0001c0001t0001g0081 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0146 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0003g0125	8	358	0.0224	-6	c.478 others(23): Show c.478+4978_478+4983delACTAAA	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	5/7			chr6	TogoVar
ATG5_chr6_106179476_106330760	106297717	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02132.hp2 HG02280.hp2 others(23): Show HG00438.hp1 HG02132.hp2 HG02280.hp2 HG02523.hp1 HG04204.hp2 NA18522.hp1 NA18939.hp2 NA18941.hp1 NA18945.hp2 NA18946.hp1 NA18962.hp1 NA18964.hp1 NA18969.hp1 NA18970.hp2 NA18975.hp1 NA18983.hp2 NA18986.hp1 NA18992.hp2 NA18993.hp1 NA18998.hp1 NA19007.hp1 NA19068.hp2 NA19070.hp2 NA19080.hp2 NA19083.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0099 others(21): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0099 a0001c0001t0001g0175 a0001c0001t0001g0187 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0251 a0001c0001t0001g0278 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0322 a0001c0001t0005g0333	26	358	0.0726	-6	c.237 others(23): Show c.237-4617_237-4612delGTGTGT	ATG5	ENSG00000057663.16	transcript	ENST00000369076.8	protein_coding	3/7			chr6	TogoVar
ATG7_chr3_11267397_11562665	11286579	CTTTCTT CTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02572.hp1 HG03195.hp2 others(4): Show HG02109.hp2 HG02572.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0013 a0001c0001t0002 a0001c0001t0004 a0001c0002t0013	a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0242 others(4): Show a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0242 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0004g0243 a0001c0002t0013g0252	7	292	0.0240	-6	c.-11 others(23): Show c.-11+4145_-11+4150delCTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	3/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11303917	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp1 HG02109.hp1 others(7): Show HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG03098.hp2 HG03453.hp2 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0005c0008 a0001c0001 a0001c0002 a0005c0008	a0001c0001t0004 a0001c0001t0006 a0001c0002t0035 others(1): Show a0001c0001t0004 a0001c0001t0006 a0001c0002t0035 a0005c0008t0004	a0001c0001t0004g0265 a0001c0001t0004g0266 a0001c0001t0004g0267 others(7): Show a0001c0001t0004g0265 a0001c0001t0004g0266 a0001c0001t0004g0267 a0001c0001t0004g0268 a0001c0001t0004g0273 a0001c0001t0006g0264 a0001c0001t0006g0269 a0001c0001t0006g0272 a0001c0002t0035g0271 a0005c0008t0004g0270	10	292	0.0343	-6	c.216 others(23): Show c.216-3007_216-3002delAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	5/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11366971	CTGTGTG CTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03209.hp1 HG03540.hp2 HG03130.hp2 HG03209.hp1 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0024 a0001c0002t0026 a0001c0002t0013 a0001c0002t0024 a0001c0002t0026	a0001c0002t0013g0252 a0001c0002t0024g0263 a0001c0002t0026g0281 a0001c0002t0013g0252 a0001c0002t0024g0263 a0001c0002t0026g0281	3	292	0.0103	-6	c.187 others(25): Show c.1875+2275_1875+2280delGTGTGT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11372827	CGTGTGT CGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00544.hp1 others(99): Show HG00099.hp1 HG00280.hp2 HG00544.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01358.hp2 HG01496.hp2 HG01516.hp2 HG01934.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02027.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02451.hp2 HG02683.hp2 HG02698.hp1 HG02717.hp2 HG02738.hp2 HG02896.hp1 HG02897.hp1 HG03017.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp2 HG03927.hp2 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 NA18747.hp2 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18954.hp1 NA18969.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18980.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18994.hp2 NA18998.hp2 NA19002.hp2 NA19005.hp1 NA19010.hp2 NA19012.hp2 NA19058.hp1 NA19060.hp2 NA19068.hp1 NA19077.hp2 NA19081.hp2 NA20129.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0003c0005 others(1): Show a0001c0001 a0001c0002 a0003c0005 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0001t0012 a0001c0001t0018 a0001c0001t0020 a0001c0001t0030 a0001c0001t0033 a0001c0001t0043 a0001c0001t0050 a0001c0002t0001 a0001c0002t0004 a0001c0002t0011 a0001c0002t0028 a0001c0002t0029 a0003c0005t0001 a0004c0007t0001	a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0021 others(99): Show a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0067 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0101 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0284 a0001c0001t0002g0014 a0001c0001t0002g0019 a0001c0001t0002g0047 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0196 a0001c0001t0002g0201 a0001c0001t0003g0025 a0001c0001t0003g0042 a0001c0001t0003g0095 a0001c0001t0003g0106 a0001c0001t0003g0108 a0001c0001t0011g0037 a0001c0001t0011g0039 a0001c0001t0011g0049 a0001c0001t0011g0122 a0001c0001t0012g0052 a0001c0001t0018g0121 a0001c0001t0020g0060 a0001c0001t0020g0080 a0001c0001t0030g0136 a0001c0001t0033g0063 a0001c0001t0043g0054 a0001c0001t0050g0056 a0001c0002t0001g0016 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0023 a0001c0002t0001g0036 a0001c0002t0001g0045 a0001c0002t0001g0065 a0001c0002t0001g0086 a0001c0002t0001g0099 a0001c0002t0001g0102 a0001c0002t0004g0083 a0001c0002t0011g0051 a0001c0002t0028g0048 a0001c0002t0029g0043 a0003c0005t0001g0026 a0003c0005t0001g0103 a0004c0007t0001g0117	102	292	0.3493	-6	c.187 others(25): Show c.1876-7141_1876-7136delTGTGTG	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11374892	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00673.hp1 HG01891.hp2 others(12): Show HG00423.hp1 HG00673.hp1 HG01891.hp2 HG02083.hp2 HG02257.hp1 HG02615.hp2 HG02738.hp2 HG02818.hp2 HG03491.hp1 HG04204.hp2 HG06807.hp2 NA18747.hp2 NA18949.hp2 NA18955.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0020 a0001c0001t0046 a0001c0001t0047 a0001c0002t0013 a0001c0002t0035	a0001c0001t0001g0105 a0001c0001t0002g0069 a0001c0001t0002g0206 others(12): Show a0001c0001t0001g0105 a0001c0001t0002g0069 a0001c0001t0002g0206 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0108 a0001c0001t0003g0129 a0001c0001t0005g0149 a0001c0001t0005g0245 a0001c0001t0020g0060 a0001c0001t0020g0080 a0001c0001t0046g0118 a0001c0001t0047g0104 a0001c0002t0013g0133 a0001c0002t0035g0271	15	292	0.0514	-6	c.187 others(25): Show c.1876-5056_1876-5051delAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11469988	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00544.hp2 others(76): Show HG00280.hp1 HG00423.hp2 HG00544.hp2 HG00609.hp1 HG00673.hp2 HG00733.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01106.hp2 HG01168.hp2 HG01175.hp2 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01891.hp1 HG01934.hp2 HG01943.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp1 HG02572.hp1 HG02630.hp1 HG02683.hp1 HG02698.hp2 HG02723.hp1 HG02809.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03490.hp2 HG03540.hp1 HG03710.hp1 HG03942.hp1 NA18747.hp1 NA18939.hp1 NA18942.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp1 NA18951.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18983.hp2 NA18994.hp1 NA19005.hp2 NA19010.hp1 NA19012.hp1 NA19058.hp2 NA19062.hp1 NA19068.hp2 NA19077.hp1 NA19081.hp1 NA19087.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0012 a0001c0001t0036 a0001c0001t0051 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0012 a0001c0002t0013 a0001c0002t0017 a0001c0002t0037 a0001c0002t0042 a0001c0006t0002	a0001c0001t0001g0105 a0001c0001t0001g0199 a0001c0001t0001g0207 others(76): Show a0001c0001t0001g0105 a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0215 a0001c0001t0001g0227 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0002g0028 a0001c0001t0002g0125 a0001c0001t0002g0142 a0001c0001t0002g0150 a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0192 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0226 a0001c0001t0002g0228 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0246 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0283 a0001c0001t0004g0184 a0001c0001t0004g0186 a0001c0001t0004g0205 a0001c0001t0004g0221 a0001c0001t0004g0243 a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0001t0012g0190 a0001c0001t0036g0123 a0001c0001t0051g0198 a0001c0002t0001g0175 a0001c0002t0001g0179 a0001c0002t0001g0180 a0001c0002t0001g0185 a0001c0002t0001g0193 a0001c0002t0001g0229 a0001c0002t0001g0230 a0001c0002t0001g0247 a0001c0002t0002g0225 a0001c0002t0004g0188 a0001c0002t0012g0248 a0001c0002t0013g0252 a0001c0002t0017g0119 a0001c0002t0017g0120 a0001c0002t0037g0171 a0001c0002t0042g0170 a0001c0006t0002g0094	79	292	0.2706	-6	c.207 others(27): Show c.2079+43078_2079+43083delAAAAAA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11475868	GACACAC GACACAC	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02451.hp1 HG02622.hp2 others(1): Show HG00639.hp2 HG02451.hp1 HG02622.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0002t0010 a0001c0002t0035 a0001c0001t0010 a0001c0002t0010 a0001c0002t0035	a0001c0001t0010g0163 a0001c0002t0010g0162 a0001c0002t0010g0167 others(1): Show a0001c0001t0010g0163 a0001c0002t0010g0162 a0001c0002t0010g0167 a0001c0002t0035g0271	4	292	0.0137	-6	c.207 others(27): Show c.2079+48977_2079+48982delACACAC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11478989	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG02559.hp1 HG03098.hp1 others(2): Show HG01943.hp1 HG02559.hp1 HG03098.hp1 HG03130.hp2 HG03209.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0006 a0001c0002t0013 a0001c0002t0024 others(1): Show a0001c0001t0006 a0001c0002t0013 a0001c0002t0024 a0002c0003t0008	a0001c0001t0006g0152 a0001c0002t0013g0151 a0001c0002t0013g0252 others(2): Show a0001c0001t0006g0152 a0001c0002t0013g0151 a0001c0002t0013g0252 a0001c0002t0024g0263 a0002c0003t0008g0278	5	292	0.0171	-6	c.207 others(27): Show c.2079+52109_2079+52114delCACACA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11506579	AAAAAAC AAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01891.hp2 HG02055.hp1 others(4): Show HG01081.hp2 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02809.hp1 HG06807.hp1 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0005c0008 a0001c0001 a0001c0002 a0005c0008	a0001c0001t0002 a0001c0001t0004 a0001c0002t0017 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0017 a0005c0008t0004	a0001c0001t0002g0206 a0001c0001t0004g0148 a0001c0001t0004g0266 others(4): Show a0001c0001t0002g0206 a0001c0001t0004g0148 a0001c0001t0004g0266 a0001c0001t0004g0267 a0001c0001t0004g0268 a0001c0002t0017g0119 a0005c0008t0004g0270	7	292	0.0240	-6	c.208 others(27): Show c.2080-48231_2080-48226delAAAAAC	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20			chr3	TogoVar
ATG7_chr3_11267397_11562665	11515704	TCATACA TCATACA	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00741.hp1 HG01168.hp1 others(15): Show HG00735.hp1 HG00741.hp1 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01884.hp1 HG01993.hp1 HG02559.hp1 HG02622.hp1 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG03098.hp2 HG03471.hp2 HG03516.hp2 HG03704.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0006 a0001c0002t0004 a0001c0002t0040 others(7): Show a0001c0001t0006 a0001c0002t0004 a0001c0002t0040 a0002c0003t0008 a0002c0003t0016 a0002c0003t0022 a0002c0003t0023 a0002c0003t0032 a0002c0004t0021 a0002c0004t0025	a0001c0001t0006g0264 a0001c0001t0006g0269 a0001c0001t0006g0272 others(15): Show a0001c0001t0006g0264 a0001c0001t0006g0269 a0001c0001t0006g0272 a0001c0002t0004g0083 a0001c0002t0040g0141 a0002c0003t0008g0275 a0002c0003t0008g0276 a0002c0003t0008g0277 a0002c0003t0008g0278 a0002c0003t0008g0279 a0002c0003t0008g0280 a0002c0003t0016g0286 a0002c0003t0016g0287 a0002c0003t0022g0289 a0002c0003t0023g0285 a0002c0003t0032g0124 a0002c0004t0021g0288 a0002c0004t0025g0292	18	292	0.0616	-6	c.208 others(27): Show c.2080-39097_2080-39092delACACAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11519539	GTTTTTT GTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02818.hp1 HG02895.hp2 others(3): Show HG02809.hp2 HG02818.hp1 HG02895.hp2 HG03471.hp2 HG03491.hp1 HG03516.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0020 a0001c0001t0036 a0001c0002t0039 others(2): Show a0001c0001t0020 a0001c0001t0036 a0001c0002t0039 a0002c0003t0008 a0002c0004t0025	a0001c0001t0020g0060 a0001c0001t0036g0123 a0001c0002t0039g0007 others(3): Show a0001c0001t0020g0060 a0001c0001t0036g0123 a0001c0002t0039g0007 a0002c0003t0008g0279 a0002c0003t0008g0280 a0002c0004t0025g0292	6	292	0.0206	-6	c.208 others(27): Show c.2080-35239_2080-35234delTTTTTT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11524282	GCCCATT GCCCATT	G G	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18981.hp1 NA19010.hp1 NA18955.hp2 NA18981.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0204 a0001c0002t0001g0193 a0001c0002t0001g0229 a0001c0001t0002g0204 a0001c0002t0001g0193 a0001c0002t0001g0229	3	292	0.0103	-6	c.208 others(27): Show c.2080-30524_2080-30519delTTCCCA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527069	GTGTATA GTGTATA	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02145.hp1 HG02809.hp1 others(2): Show HG02109.hp1 HG02145.hp1 HG02809.hp1 HG03453.hp2 HG06807.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0008 a0001c0001 a0005c0008	a0001c0001t0004 a0005c0008t0004 a0001c0001t0004 a0005c0008t0004	a0001c0001t0004g0148 a0001c0001t0004g0265 a0001c0001t0004g0267 others(2): Show a0001c0001t0004g0148 a0001c0001t0004g0265 a0001c0001t0004g0267 a0001c0001t0004g0273 a0005c0008t0004g0270	5	292	0.0171	-6	c.208 others(27): Show c.2080-27740_2080-27735delGTATAT	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATG7_chr3_11267397_11562665	11527071	GTATATA GTATATA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00423.hp2 HG00673.hp2 others(63): Show HG00280.hp1 HG00423.hp2 HG00673.hp2 HG00733.hp1 HG01074.hp1 HG01106.hp2 HG01256.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01934.hp2 HG01943.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp1 HG02165.hp1 HG02572.hp1 HG02683.hp1 HG02698.hp2 HG02970.hp2 HG03017.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp2 HG03491.hp2 HG03688.hp2 HG03710.hp1 HG03942.hp1 HG04204.hp2 NA18747.hp1 NA18939.hp1 NA18942.hp1 NA18945.hp2 NA18946.hp2 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18969.hp2 NA18973.hp2 NA18980.hp1 NA18981.hp1 NA18982.hp1 NA18983.hp2 NA18994.hp2 NA19010.hp1 NA19012.hp1 NA19062.hp1 NA19068.hp2 NA19077.hp1 NA19081.hp1 NA19087.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0051 a0001c0002t0001 a0001c0002t0002 a0001c0002t0009 a0001c0002t0012 a0001c0002t0015 a0001c0006t0002	a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0208 others(63): Show a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0238 a0001c0001t0002g0019 a0001c0001t0002g0028 a0001c0001t0002g0047 a0001c0001t0002g0064 a0001c0001t0002g0069 a0001c0001t0002g0125 a0001c0001t0002g0142 a0001c0001t0002g0183 a0001c0001t0002g0187 a0001c0001t0002g0192 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0228 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0246 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0283 a0001c0001t0004g0184 a0001c0001t0004g0186 a0001c0001t0004g0205 a0001c0001t0004g0243 a0001c0001t0051g0198 a0001c0002t0001g0045 a0001c0002t0001g0180 a0001c0002t0001g0185 a0001c0002t0001g0193 a0001c0002t0001g0229 a0001c0002t0001g0230 a0001c0002t0001g0247 a0001c0002t0002g0225 a0001c0002t0009g0164 a0001c0002t0012g0248 a0001c0002t0015g0290 a0001c0002t0015g0291 a0001c0006t0002g0094	66	292	0.2260	-6	c.208 others(27): Show c.2080-27723_2080-27718delTATATA	ATG7	ENSG00000197548.13	transcript	ENST00000693202.1	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr3	TogoVar
ATIC_chr2_215307059_215354764	215311095	AAAAAAG AAAAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00544.hp1 HG00558.hp1 others(50): Show HG00438.hp1 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00673.hp2 HG01123.hp2 HG01168.hp2 HG01169.hp1 HG01261.hp2 HG01952.hp1 HG02015.hp1 HG02071.hp2 HG02083.hp2 HG02132.hp1 HG02293.hp2 HG02698.hp2 HG03669.hp2 HG04199.hp1 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18948.hp1 NA18949.hp1 NA18951.hp2 NA18953.hp2 NA18955.hp2 NA18961.hp1 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18977.hp1 NA18980.hp2 NA18981.hp1 NA18984.hp2 NA18990.hp1 NA18991.hp1 NA18993.hp2 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19060.hp1 NA19068.hp2 NA19077.hp1 NA19078.hp1 NA19082.hp1 NA19090.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0013 a0001c0001 a0007c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0007c0013t0001	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 others(27): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0121 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0150 a0001c0001t0001g0153 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0003g0097 a0001c0001t0009g0009 a0007c0013t0001g0002	53	382	0.1387	-6	c.-10 others(17): Show c.-1047_-1042delAAAAAG	ATIC	ENSG00000138363.15	transcript	ENST00000236959.14	protein_coding		963		chr2	TogoVar

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