regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GPAT4_chr8_41573200_41630001 | 41581993 | ATTTTTTT | A | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp1 HG00642.hp1 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(3): Show | a0001c0001t0002g0031a0001c0001t0002g0032a0001c0001t0002g0280others(29): Show | 34 | 410 | 0.0829 | -7 | c.-84 others(26): Show |
GPAT4 | ENSG00000158669.11 | transcript | ENST00000396987.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
GPAT4_chr8_41573200_41630001 | 41603525 | CAAAAAAA | C | intron_variant | MODIFIER | HG02055.hp1 HG02280.hp1 HG02647.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0004a0001c0001t0008g0096a0001c0001t0008g0097others(2): Show | 8 | 410 | 0.0195 | -7 | c.165 others(24): Show |
GPAT4 | ENSG00000158669.11 | transcript | ENST00000396987.7 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
GPATCH2_chr1_217421992_217636090 | 217524873 | AGAGGGGG | A | intron_variant | MODIFIER | HG01168.hp2 HG02970.hp2 |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0017 | a0001c0001t0009g0187a0001c0001t0017g0101 | 2 | 188 | 0.0106 | -7 | c.109 others(26): Show |
GPATCH2 | ENSG00000092978.11 | transcript | ENST00000366935.8 | protein_coding | 5/9 | chr1 | TogoVar | ||||||
GPATCH2_chr1_217421992_217636090 | 217629226 | GTCATACA | G | intron_variant | MODIFIER | HG00609.hp2 HG00741.hp2 HG01106.hp2 others(16): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(3): Show | a0001c0001t0002g0114a0001c0001t0002g0117a0001c0001t0002g0118others(16): Show | 19 | 188 | 0.1011 | -7 | c.56+ others(22): Show |
GPATCH2 | ENSG00000092978.11 | transcript | ENST00000366935.8 | protein_coding | 1/9 | chr1 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44424760 | CAAAAAAT | C | intron_variant | MODIFIER | HG00639.hp1 HG01106.hp2 HG01993.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0215a0001c0002t0001g0256a0001c0002t0001g0260 | 3 | 326 | 0.0092 | -7 | c.349 others(22): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 5/7 | chr17 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44477998 | TGGGGTGG | T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00408.hp1 others(142): Show |
a0001a0003a0004others(1): Show | a0001c0002a0001c0003a0001c0004others(4): Show | a0001c0002t0001a0001c0002t0004a0001c0002t0006others(10): Show | a0001c0002t0001g0002a0001c0002t0001g0156a0001c0002t0001g0165others(142): Show | 145 | 326 | 0.4448 | -7 | c.46- others(22): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 1/7 | chr17 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44483177 | ATATATAT | A | intron_variant | MODIFIER | HG01081.hp1 HG01261.hp2 HG01928.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0008 | a0001c0001t0001a0001c0002t0001a0001c0008t0013 | a0001c0001t0001g0001a0001c0001t0001g0145a0001c0001t0001g0146others(3): Show | 7 | 326 | 0.0215 | -7 | c.46- others(22): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 1/7 | chr17 | TogoVar | ||||||
GPBAR1_chr2_218256015_218268861 | 218267958 | GGTTTTTT | G | downstream_gene_variant | MODIFIER | HG02717.hp1 HG02809.hp2 HG03041.hp1 others(9): Show |
a0001a0006 | a0001c0001a0006c0008 | a0001c0001t0001a0001c0001t0003a0006c0008t0003 | a0001c0001t0001g0001a0001c0001t0001g0013a0001c0001t0003g0001others(4): Show | 12 | 406 | 0.0296 | -7 | c.*42 others(18): Show |
GPBAR1 | ENSG00000179921.15 | transcript | ENST00000519574.2 | protein_coding | 4098 | chr2 | TogoVar | ||||||
GPBP1L1_chr1_45622304_45691533 | 45643658 | CTTTTTTT | C | intron_variant | MODIFIER | HG02486.hp2 HG02896.hp1 HG02897.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0006a0001c0003t0004 | a0001c0001t0006g0117a0001c0001t0006g0119a0001c0001t0006g0120others(4): Show | 7 | 292 | 0.0240 | -7 | c.478 others(24): Show |
GPBP1L1 | ENSG00000159592.11 | transcript | ENST00000355105.8 | protein_coding | 6/12 | chr1 | TogoVar | ||||||
GPBP1L1_chr1_45622304_45691533 | 45670549 | TAGTTTTA | T | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00544.hp2 others(96): Show |
a0001a0003a0004 | a0001c0002a0001c0007a0001c0008others(2): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0011others(8): Show | a0001c0002t0002g0011a0001c0002t0002g0013a0001c0002t0002g0014others(96): Show | 99 | 292 | 0.3390 | -7 | c.-10 others(28): Show |
GPBP1L1 | ENSG00000159592.11 | transcript | ENST00000355105.8 | protein_coding | 2/12 | chr1 | TogoVar | ||||||
GPBP1L1_chr1_45622304_45691533 | 45676710 | CAAAAAAA | C | intron_variant | MODIFIER | HG00642.hp1 HG01123.hp1 HG01168.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0005 | a0001c0001t0003g0118a0001c0002t0005g0043a0001c0002t0005g0054others(5): Show | 8 | 292 | 0.0274 | -7 | c.-10 others(28): Show |
GPBP1L1 | ENSG00000159592.11 | transcript | ENST00000355105.8 | protein_coding | 2/12 | chr1 | TogoVar | ||||||
GPBP1_chr5_57169059_57269673 | 57177648 | CTTTTTTT | C | intron_variant | MODIFIER | HG02280.hp1 HG02809.hp2 HG03139.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0155a0001c0001t0001g0156a0001c0001t0001g0157others(3): Show | 6 | 290 | 0.0207 | -7 | c.-58 others(24): Show |
GPBP1 | ENSG00000062194.16 | transcript | ENST00000506184.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GPBP1_chr5_57169059_57269673 | 57229492 | CTTTTCCT | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(99): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0003a0004c0010others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(6): Show | a0001c0001t0001g0006a0001c0001t0001g0022a0001c0001t0001g0023others(99): Show | 102 | 290 | 0.3517 | -7 | c.64- others(22): Show |
GPBP1 | ENSG00000062194.16 | transcript | ENST00000506184.7 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GPBP1_chr5_57169059_57269673 | 57236642 | GCATTTTA | G | intron_variant | MODIFIER | HG02280.hp1 HG02809.hp2 HG03139.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0155a0001c0001t0001g0156a0001c0001t0001g0157others(3): Show | 6 | 290 | 0.0207 | -7 | c.478 others(22): Show |
GPBP1 | ENSG00000062194.16 | transcript | ENST00000506184.7 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GPC3_chrX_133530745_133990594 | 133593330 | CAAAAAAA | C | intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0002 | a0001c0002t0009 | a0001c0002t0009g0152 | 1 | 152 | 0.0066 | -7 | c.157 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 7/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133600708 | TGGATTTA | T | intron_variant | MODIFIER | HG02622.hp2 HG02886.hp1 HG03130.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0009 | a0001c0002t0002g0061a0001c0002t0002g0063a0001c0002t0002g0098others(3): Show | 6 | 152 | 0.0395 | -7 | c.141 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133661624 | CTCTCTCT | C | intron_variant | MODIFIER | HG00639.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 | 1 | 152 | 0.0066 | -7 | c.141 others(23): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133661626 | CTCTCTCT | C | intron_variant | MODIFIER | HG03942.hp1 NA18964.hp1 NA18984.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0055a0001c0001t0001g0114 | 3 | 152 | 0.0197 | -7 | c.141 others(23): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133661627 | TCTCTCTC | T | intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0127 | 1 | 152 | 0.0066 | -7 | c.141 others(23): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133823128 | CAAAAAAA | C | intron_variant | MODIFIER | HG02622.hp2 HG02886.hp1 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0098a0001c0002t0002g0099 | 2 | 152 | 0.0132 | -7 | c.338 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133827944 | CAAAAAAA | C | intron_variant | MODIFIER | HG00738.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0107 | 1 | 152 | 0.0066 | -7 | c.338 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133841215 | ATTTTTTT | A | intron_variant | MODIFIER | NA18943.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0144 | 1 | 152 | 0.0066 | -7 | c.338 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133849084 | CTTTTTTT | C | intron_variant | MODIFIER | NA18955.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | 1 | 152 | 0.0066 | -7 | c.338 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133852985 | CAAAAAAA | C | intron_variant | MODIFIER | HG02896.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0125 | 1 | 152 | 0.0066 | -7 | c.338 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133889831 | CTTTTTTT | C | intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0075 | 1 | 152 | 0.0066 | -7 | c.337 others(26): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC4_chrX_133295103_133420489 | 133344191 | GTTTTTTT | G | intron_variant | MODIFIER | HG00609.hp1 HG01099.hp1 HG01169.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0025 | a0001c0001t0001g0024a0001c0001t0001g0032a0001c0001t0001g0051others(5): Show | 8 | 221 | 0.0362 | -7 | c.161 others(24): Show |
GPC4 | ENSG00000076716.9 | transcript | ENST00000370828.4 | protein_coding | 1/8 | chrX | TogoVar | ||||||
GPC4_chrX_133295103_133420489 | 133372224 | TAAAAAAA | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00558.hp1 others(92): Show |
a0001a0002a0006 | a0001c0001a0002c0002a0002c0005others(1): Show | a0001c0001t0003a0001c0001t0020a0001c0001t0025others(7): Show | a0001c0001t0003g0111a0001c0001t0003g0112a0001c0001t0003g0124others(91): Show | 95 | 221 | 0.4299 | -7 | c.161 others(26): Show |
GPC4 | ENSG00000076716.9 | transcript | ENST00000370828.4 | protein_coding | 1/8 | chrX | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 91432205 | GTGTGTGT | G | intron_variant | MODIFIER | HG02896.hp1 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013a0001c0001t0001g0023 | 2 | 42 | 0.0476 | -7 | c.164 others(26): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 1/7 | chr13 | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 91621759 | CATTATAT | C | intron_variant | MODIFIER | HG02622.hp1 HG02896.hp1 HG02897.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0013a0001c0001t0001g0022a0001c0001t0001g0023others(1): Show | 4 | 42 | 0.0952 | -7 | c.326 others(26): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 91723089 | AATGTAGC | A | intron_variant | MODIFIER | HG02896.hp1 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0013a0001c0001t0001g0023 | 2 | 42 | 0.0476 | -7 | c.102 others(26): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 91849889 | AATAATTC | A | intron_variant | MODIFIER | HG01109.hp1 HG01109.hp2 HG01261.hp1 others(8): Show |
a0001a0002a0004 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0006a0001c0001t0001g0012a0001c0001t0001g0031others(8): Show | 11 | 42 | 0.2619 | -7 | c.128 others(28): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 91980597 | TCGATGTC | T | intron_variant | MODIFIER | HG02280.hp2 HG02922.hp1 HG02922.hp2 others(2): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0004a0003c0003t0001 | a0001c0001t0001g0012a0001c0001t0001g0031a0001c0001t0001g0033others(2): Show | 5 | 42 | 0.1191 | -7 | c.140 others(28): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92074951 | GTTTATTT | G | intron_variant | MODIFIER | HG01109.hp1 HG02809.hp2 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0007a0001c0001t0001g0027a0001c0001t0002g0040 | 3 | 42 | 0.0714 | -7 | c.140 others(28): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92138520 | AAAAAAAT | A | intron_variant | MODIFIER | HG01109.hp1 HG01109.hp2 HG01891.hp1 others(22): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0006a0001c0001t0001g0011a0001c0001t0001g0012others(22): Show | 25 | 42 | 0.5952 | -7 | c.140 others(26): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92225073 | ATACCACC | A | intron_variant | MODIFIER | HG01891.hp2 HG02622.hp2 HG03486.hp1 |
a0001a0004a0005 | a0001c0001a0004c0006a0005c0005 | a0001c0001t0001a0004c0006t0001a0005c0005t0002 | a0001c0001t0001g0018a0004c0006t0001g0028a0005c0005t0002g0035 | 3 | 42 | 0.0714 | -7 | c.156 others(28): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92602226 | TATATAAC | T | intron_variant | MODIFIER | HG01109.hp2 HG01891.hp1 HG03453.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0001 | a0001c0001t0001g0006a0001c0001t0002g0009a0001c0004t0001g0024 | 3 | 42 | 0.0714 | -7 | c.156 others(30): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92655329 | ATTTTATT | A | intron_variant | MODIFIER | HG02615.hp1 HG03239.hp1 HG03239.hp2 others(1): Show |
a0001a0005 | a0001c0001a0005c0005 | a0001c0001t0001a0001c0001t0003a0005c0005t0002 | a0001c0001t0001g0011a0001c0001t0003g0002a0001c0001t0003g0003others(1): Show | 4 | 42 | 0.0952 | -7 | c.156 others(30): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC5_chr13_91393621_92872237 | 92690876 | CTCAGGGG | C | intron_variant | MODIFIER | HG01891.hp1 HG02615.hp2 HG02622.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0001 | a0001c0001t0001g0012a0001c0001t0001g0022a0001c0001t0002g0009others(3): Show | 6 | 42 | 0.1429 | -7 | c.156 others(30): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 93547174 | CAAAAAAA | C | intron_variant | MODIFIER | HG01167.hp1 HG01167.hp2 HG01243.hp2 others(32): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(23): Show | a0001c0001t0001g0009a0001c0001t0001g0019a0001c0001t0001g0028others(32): Show | 35 | 76 | 0.4605 | -7 | c.319 others(24): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 93597007 | CAAAAAAA | C | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp1 HG02647.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(5): Show | a0001c0001t0001g0029a0001c0001t0001g0071a0001c0001t0001g0075others(8): Show | 11 | 76 | 0.1447 | -7 | c.319 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 93602980 | CTTTTTCT | C | intron_variant | MODIFIER | HG02451.hp1 HG02647.hp1 HG02818.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(7): Show | a0001c0001t0001g0037a0001c0001t0004g0042a0001c0001t0005g0050others(7): Show | 10 | 76 | 0.1316 | -7 | c.319 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94086701 | GATTGTAA | G | intron_variant | MODIFIER | HG00558.hp1 HG01433.hp2 HG02055.hp2 others(1): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0012a0001c0003t0026others(1): Show | a0001c0001t0001g0028a0001c0001t0012g0002a0001c0003t0026g0006others(1): Show | 4 | 76 | 0.0526 | -7 | c.877 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94114096 | CAAAAAAA | C | intron_variant | MODIFIER | HG01884.hp1 HG01975.hp1 HG02895.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(3): Show | a0001c0001t0001g0019a0001c0001t0001g0026a0001c0001t0004g0042others(4): Show | 7 | 76 | 0.0921 | -7 | c.877 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94270964 | ATTTTTTT | A | intron_variant | MODIFIER | HG01433.hp1 HG02055.hp1 HG02258.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(5): Show | a0001c0001t0001g0069a0001c0001t0004g0033a0001c0001t0005g0050others(6): Show | 9 | 76 | 0.1184 | -7 | c.878 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94272458 | CTTTTCTT | C | intron_variant | MODIFIER | HG02922.hp1 HG03540.hp2 NA19240.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0016a0001c0001t0029 | a0001c0001t0001g0009a0001c0001t0001g0069a0001c0001t0016g0035others(1): Show | 4 | 76 | 0.0526 | -7 | c.878 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94287148 | AAGTTTGC | A | intron_variant | MODIFIER | HG02970.hp2 HG03579.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0034a0001c0003t0014 | a0001c0001t0034g0076a0001c0003t0014g0021 | 2 | 76 | 0.0263 | -7 | c.100 others(24): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 94351962 | CAAAAAAA | C | intron_variant | MODIFIER | HG01074.hp1 HG01167.hp2 HG01243.hp2 others(19): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0026a0001c0001t0001g0043a0001c0001t0001g0071others(19): Show | 22 | 76 | 0.2895 | -7 | c.115 others(28): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 6/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPCPD1_chr20_5539439_5616006 | 5601361 | CTTTTTTT | C | intron_variant | MODIFIER | HG00099.hp2 HG00733.hp1 HG01167.hp2 others(8): Show |
a0002 | a0002c0002 | a0002c0002t0005a0002c0002t0006 | a0002c0002t0005g0347a0002c0002t0006g0352a0002c0002t0006g0362others(8): Show | 11 | 386 | 0.0285 | -7 | c.50- others(22): Show |
GPCPD1 | ENSG00000125772.14 | transcript | ENST00000379019.7 | protein_coding | 2/19 | chr20 | TogoVar | ||||||
GPD1L_chr3_32101620_32173709 | 32121625 | TATATATA | T | intron_variant | MODIFIER | HG00423.hp2 HG00558.hp1 HG00609.hp2 others(45): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0071a0001c0001t0002g0007a0001c0001t0002g0008others(41): Show | 48 | 360 | 0.1333 | -7 | c.48- others(22): Show |
GPD1L | ENSG00000152642.11 | transcript | ENST00000282541.10 | protein_coding | 1/7 | chr3 | TogoVar | ||||||
GPD1L_chr3_32101620_32173709 | 32146083 | CTTTTTTT | C | intron_variant | MODIFIER | HG00639.hp1 HG00639.hp2 HG00741.hp1 others(79): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(12): Show | a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0021others(72): Show | 82 | 360 | 0.2278 | -7 | c.506 others(22): Show |
GPD1L | ENSG00000152642.11 | transcript | ENST00000282541.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar |