regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LATS2_chr13_20968036_21066586 | 21023677 | AAAAAAAC | A | intron_variant | MODIFIER | HG01167.hp2 HG01168.hp2 HG01257.hp2 others(26): Show |
a0001a0002a0003others(2): Show | a0001c0010a0002c0006a0003c0003others(6): Show | a0001c0010t0001a0002c0006t0004a0003c0003t0002others(12): Show | a0001c0010t0001g0056a0002c0006t0004g0021a0002c0006t0004g0213others(26): Show | 29 | 316 | 0.0918 | -7 | c.342 others(26): Show |
LATS2 | ENSG00000150457.9 | transcript | ENST00000382592.5 | protein_coding | 2/7 | chr13 | TogoVar | ||||||
LAX1_chr1_203760183_203781372 | 203773756 | CTTTTTTT | C | intron_variant | MODIFIER | HG02258.hp1 HG02258.hp2 HG02647.hp1 others(8): Show |
a0001 | a0001c0002a0001c0006a0001c0009 | a0001c0002t0002a0001c0002t0006a0001c0006t0002others(2): Show | a0001c0002t0002g0087a0001c0002t0002g0199a0001c0002t0002g0262others(7): Show | 11 | 422 | 0.0261 | -7 | c.391 others(20): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LAX1_chr1_203760183_203781372 | 203776350 | CAAAAAAA | C | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00438.hp2 others(103): Show |
a0001a0006a0007others(1): Show | a0001c0002a0001c0006a0001c0007others(4): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0010others(6): Show | a0001c0002t0002g0001a0001c0002t0002g0007a0001c0002t0002g0008others(96): Show | 106 | 422 | 0.2512 | -7 | c.*16 others(18): Show |
LAX1 | ENSG00000122188.13 | transcript | ENST00000442561.7 | protein_coding | 5/5 | 1663 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||
LBP_chr20_38341482_38382013 | 38365712 | AAAAAAAT | A | intron_variant | MODIFIER | HG00099.hp1 HG00738.hp2 HG00741.hp2 others(13): Show |
a0006a0011a0017 | a0006c0005a0011c0020a0017c0032 | a0006c0005t0001a0006c0005t0002a0011c0020t0001others(1): Show | a0006c0005t0001g0024a0006c0005t0001g0092a0006c0005t0001g0093others(11): Show | 16 | 394 | 0.0406 | -7 | c.921 others(22): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
LBX1_chr10_101221994_101234463 | 101229376 | CTCTCTCT | C | 5_prime_UTR_variant | MODIFIER | HG02145.hp1 HG03130.hp1 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0008 | 3 | 432 | 0.0069 | -7 | c.-56 others(16): Show |
LBX1 | ENSG00000138136.7 | transcript | ENST00000370193.4 | protein_coding | 1/2 | 562 | chr10 | TogoVar | |||||
LCA5_chr6_79479991_79542430 | 79482975 | CTATAACA | C | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00609.hp2 others(115): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0009a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0010a0001c0001t0013others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0010a0001c0001t0001g0011others(55): Show | 118 | 400 | 0.2950 | -7 | c.*40 others(18): Show |
LCA5 | ENSG00000135338.14 | transcript | ENST00000369846.9 | protein_coding | 2015 | chr6 | TogoVar | ||||||
LCA5_chr6_79479991_79542430 | 79534062 | TTACACTG | T | intron_variant | MODIFIER | NA18940.hp2 NA18953.hp2 NA18978.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018a0001c0001t0001g0056 | 4 | 400 | 0.0100 | -7 | c.-19 others(26): Show |
LCA5 | ENSG00000135338.14 | transcript | ENST00000369846.9 | protein_coding | 1/7 | chr6 | TogoVar | ||||||
LCAT_chr16_67934750_67949120 | 67937962 | ATTTTTTT | A | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00639.hp1 HG00738.hp1 others(44): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0012others(4): Show | 47 | 304 | 0.1546 | -7 | c.*19 others(18): Show |
LCAT | ENSG00000213398.8 | transcript | ENST00000264005.10 | protein_coding | 1787 | chr16 | TogoVar | ||||||
LCE4A_chr1_152703160_152714434 | 152709582 | TTTTCTGA | T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(35): Show |
a0001a0008 | a0001c0001a0008c0009 | a0001c0001t0001a0008c0009t0001 | a0001c0001t0001g0001a0008c0009t0001g0001 | 38 | 416 | 0.0914 | -7 | c.*20 others(16): Show |
LCE4A | ENSG00000187170.6 | transcript | ENST00000368777.2 | protein_coding | 149 | chr1 | TogoVar | ||||||
LCK_chr1_32246265_32291165 | 32261240 | ATTTTTTT | A | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp1 HG00558.hp1 others(37): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0010t0001 | a0001c0001t0001g0001a0001c0001t0001g0038a0001c0001t0001g0109others(36): Show | 40 | 274 | 0.1460 | -7 | c.-6+ others(22): Show |
LCK | ENSG00000182866.18 | transcript | ENST00000336890.10 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LCK_chr1_32246265_32291165 | 32263435 | AAATAAAT | A | intron_variant | MODIFIER | HG00639.hp2 HG01109.hp1 HG02922.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0021a0001c0001t0002g0019a0001c0001t0002g0020others(2): Show | 5 | 274 | 0.0183 | -7 | c.-5- others(24): Show |
LCK | ENSG00000182866.18 | transcript | ENST00000336890.10 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LCLAT1_chr2_30442246_30649225 | 30521489 | CTTCTTTT | C | intron_variant | MODIFIER | HG01074.hp2 HG01169.hp2 HG02055.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(5): Show | a0001c0001t0001g0162a0001c0001t0004g0277a0001c0001t0011g0326others(9): Show | 12 | 366 | 0.0328 | -7 | c.-4- others(22): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LCLAT1_chr2_30442246_30649225 | 30604660 | CAAAAAAA | C | intron_variant | MODIFIER | HG01074.hp2 HG01433.hp1 HG01934.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0012a0001c0001t0018others(1): Show | a0001c0001t0008g0354a0001c0001t0008g0355a0001c0001t0008g0356others(15): Show | 18 | 366 | 0.0492 | -7 | c.629 others(26): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LCLAT1_chr2_30442246_30649225 | 30642400 | CTTTTTTT | C | 3_prime_UTR_variant | MODIFIER | HG01074.hp2 HG01934.hp2 HG02486.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0044 | a0001c0001t0012g0336a0001c0001t0012g0337a0001c0001t0012g0338others(3): Show | 6 | 366 | 0.0164 | -7 | c.*17 others(18): Show |
LCLAT1 | ENSG00000172954.14 | transcript | ENST00000379509.8 | protein_coding | 6/6 | 1794 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||
LCN15_chr9_136754634_136769518 | 136768549 | CGGGACTG | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(232): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0002c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(38): Show | 235 | 356 | 0.6601 | -7 | c.-40 others(18): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4032 | chr9 | TogoVar | ||||||
LCN15_chr9_136754634_136769518 | 136769342 | CCCCGCCA | C | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00738.hp2 HG01081.hp1 others(19): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0019others(5): Show | 22 | 356 | 0.0618 | -7 | c.-48 others(18): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4825 | chr9 | TogoVar | ||||||
LCN15_chr9_136754634_136769518 | 136769444 | CCCCGCCA | C | upstream_gene_variant | MODIFIER | HG01167.hp2 HG01256.hp1 HG01256.hp2 others(12): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0013others(2): Show | 15 | 356 | 0.0421 | -7 | c.-49 others(18): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4927 | chr9 | TogoVar | ||||||
LCN15_chr9_136754634_136769518 | 136769511 | CCCCGCCA | C | upstream_gene_variant | MODIFIER | HG00323.hp1 HG01074.hp1 HG01081.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0016others(6): Show | 17 | 356 | 0.0478 | -7 | c.-50 others(18): Show |
LCN15 | ENSG00000177984.7 | transcript | ENST00000316144.6 | protein_coding | 4994 | chr9 | TogoVar | ||||||
LCN1_chr9_135516440_135531540 | 135529984 | TGTTTTTG | T | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02647.hp2 HG02717.hp2 others(3): Show |
a0001a0004a0006 | a0001c0001a0004c0004a0006c0007 | a0001c0001t0001a0004c0004t0001a0006c0007t0001 | a0001c0001t0001g0070a0004c0004t0001g0032a0004c0004t0001g0065others(3): Show | 6 | 436 | 0.0138 | -7 | c.*36 others(18): Show |
LCN1 | ENSG00000160349.10 | transcript | ENST00000371781.4 | protein_coding | 3445 | chr9 | TogoVar | ||||||
LCP2_chr5_170241233_170302777 | 170290965 | AAAGAAAG | A | intron_variant | MODIFIER | HG00408.hp1 HG00673.hp2 HG01070.hp2 others(16): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0009a0001c0002t0001others(8): Show | a0001c0001t0001g0127a0001c0001t0001g0137a0001c0001t0001g0138others(16): Show | 19 | 384 | 0.0495 | -7 | c.141 others(24): Show |
LCP2 | ENSG00000043462.13 | transcript | ENST00000046794.10 | protein_coding | 2/20 | chr5 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66547190 | CTTTTTTT | C | downstream_gene_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG02258.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0051 | 6 | 434 | 0.0138 | -7 | c.*12 others(18): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 341 | chr15 | TogoVar | ||||||
LCTL_chr15_66542532_66570998 | 66566868 | TCTCTTTC | T | upstream_gene_variant | MODIFIER | HG00639.hp1 HG01934.hp2 HG02145.hp2 others(1): Show |
a0001 | a0001c0001a0001c0012 | a0001c0001t0003a0001c0001t0006a0001c0012t0003 | a0001c0001t0003g0241a0001c0001t0003g0242a0001c0001t0006g0239others(1): Show | 4 | 434 | 0.0092 | -7 | c.-10 others(18): Show |
LCTL | ENSG00000188501.12 | transcript | ENST00000695545.1 | protein_coding | 871 | chr15 | TogoVar | ||||||
LCT_chr2_135782850_135842184 | 135785690 | CTTTTTTT | C | downstream_gene_variant | MODIFIER | HG00558.hp2 HG02109.hp1 HG02145.hp2 others(3): Show |
a0001a0002a0004 | a0001c0005a0002c0041a0004c0006 | a0001c0005t0001a0002c0041t0001a0004c0006t0001 | a0001c0005t0001g0030a0001c0005t0001g0032a0001c0005t0001g0037others(3): Show | 6 | 366 | 0.0164 | -7 | c.*26 others(18): Show |
LCT | ENSG00000115850.10 | transcript | ENST00000264162.7 | protein_coding | 2159 | chr2 | TogoVar | ||||||
LDB1_chr10_102101489_102125368 | 102106541 | CAAAAAAA | C | 3_prime_UTR_variant | MODIFIER | HG00597.hp1 HG00597.hp2 HG00621.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0041a0001c0001t0047others(1): Show | a0001c0001t0008g0017a0001c0001t0008g0026a0001c0001t0008g0082others(9): Show | 17 | 376 | 0.0452 | -7 | c.*15 others(18): Show |
LDB1 | ENSG00000198728.11 | transcript | ENST00000673968.1 | protein_coding | 11/11 | 1545 | chr10 | TogoVar | |||||
LDB2_chr4_16496541_16903645 | 16734703 | CTTTTTTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp2 HG00609.hp2 others(26): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0005a0001c0001t0001g0014a0001c0001t0001g0025others(26): Show | 29 | 162 | 0.1790 | -7 | c.235 others(26): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 2/7 | chr4 | TogoVar | ||||||
LDB2_chr4_16496541_16903645 | 16862633 | CAAAAAAA | C | intron_variant | MODIFIER | HG02647.hp1 HG03453.hp1 HG03540.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0032a0001c0001t0001g0033others(2): Show | 5 | 162 | 0.0309 | -7 | c.132 others(26): Show |
LDB2 | ENSG00000169744.13 | transcript | ENST00000304523.10 | protein_coding | 1/7 | chr4 | TogoVar | ||||||
LDHAL6B_chr15_59201843_59213588 | 59205989 | AGATACTC | A | upstream_gene_variant | MODIFIER | HG00423.hp2 HG00738.hp1 HG01175.hp2 others(47): Show |
a0001 | a0001c0003a0001c0006 | a0001c0003t0003a0001c0003t0004a0001c0003t0006others(2): Show | a0001c0003t0003g0000a0001c0003t0004g0000a0001c0003t0006g0000others(2): Show | 50 | 448 | 0.1116 | -7 | c.-95 others(16): Show |
LDHAL6B | ENSG00000171989.6 | transcript | ENST00000307144.6 | protein_coding | 853 | chr15 | TogoVar | ||||||
LDHAL6B_chr15_59201843_59213588 | 59209813 | ACCTTTTT | A | downstream_gene_variant | MODIFIER | HG02257.hp1 HG03516.hp2 HG06807.hp2 others(1): Show |
a0001 | a0001c0006 | a0001c0006t0004 | a0001c0006t0004g0000 | 4 | 448 | 0.0089 | -7 | c.*17 others(18): Show |
LDHAL6B | ENSG00000171989.6 | transcript | ENST00000307144.6 | protein_coding | 1226 | chr15 | TogoVar | ||||||
LDLRAD3_chr11_35939062_36237136 | 35944173 | CCGCGGGG | C | intron_variant | MODIFIER | HG03239.hp1 HG03239.hp2 HG03669.hp1 others(1): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0002a0002c0003t0001 | a0001c0001t0001g0005a0001c0002t0002g0006a0002c0003t0001g0003others(1): Show | 4 | 236 | 0.0170 | -7 | c.46+ others(18): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD3_chr11_35939062_36237136 | 36044187 | CTGTAAAA | C | intron_variant | MODIFIER | HG01496.hp1 HG02109.hp1 HG02280.hp2 others(12): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0004a0001c0001t0005a0001c0001t0006others(9): Show | a0001c0001t0004g0162a0001c0001t0005g0200a0001c0001t0006g0203others(12): Show | 15 | 236 | 0.0636 | -7 | c.193 others(24): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD3_chr11_35939062_36237136 | 36108319 | CAAAAAAA | C | intron_variant | MODIFIER | HG00642.hp2 HG02109.hp1 HG02257.hp2 others(9): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0003c0011others(1): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(6): Show | a0001c0001t0001g0214a0001c0001t0005g0092a0001c0001t0005g0094others(9): Show | 12 | 236 | 0.0509 | -7 | c.454 others(24): Show |
LDLRAD3 | ENSG00000179241.13 | transcript | ENST00000315571.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
LDLRAD4_chr18_13213760_13657751 | 13297033 | GGGTTTGC | G | intron_variant | MODIFIER | HG00408.hp2 HG01261.hp2 HG01884.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0124a0001c0001t0003g0064a0001c0001t0004g0153others(6): Show | 9 | 178 | 0.0506 | -7 | c.-38 others(28): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LDLRAD4_chr18_13213760_13657751 | 13323557 | GCCAAACT | G | intron_variant | MODIFIER | HG02896.hp2 HG03225.hp1 |
a0001 | a0001c0001 | a0001c0001t0036a0001c0001t0040 | a0001c0001t0036g0129a0001c0001t0040g0127 | 2 | 178 | 0.0112 | -7 | c.-38 others(28): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LDLRAD4_chr18_13213760_13657751 | 13455531 | TAGGAGCA | T | intron_variant | MODIFIER | HG00140.hp1 HG01261.hp2 NA20752.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0045a0001c0001t0055 | a0001c0001t0004g0153a0001c0001t0045g0011a0001c0001t0055g0016 | 3 | 178 | 0.0169 | -7 | c.181 others(26): Show |
LDLRAD4 | ENSG00000168675.19 | transcript | ENST00000359446.11 | protein_coding | 4/6 | chr18 | TogoVar | ||||||
LDLRAP1_chr1_25538606_25573886 | 25549747 | GGGCGGGT | G | intron_variant | MODIFIER | HG01074.hp1 HG01106.hp2 HG01109.hp2 others(49): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0003a0002c0001others(2): Show | a0001c0002t0001a0001c0002t0009a0001c0002t0014others(14): Show | a0001c0002t0001g0063a0001c0002t0001g0064a0001c0002t0001g0218others(43): Show | 52 | 364 | 0.1429 | -7 | c.89- others(22): Show |
LDLRAP1 | ENSG00000157978.12 | transcript | ENST00000374338.5 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LEKR1_chr3_156821353_157051129 | 156854137 | CTTTTTTT | C | intron_variant | MODIFIER | HG01884.hp2 HG02622.hp1 HG02818.hp1 others(5): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0001 | a0001c0002t0001g0017a0001c0002t0001g0064a0001c0004t0001g0013others(5): Show | 8 | 244 | 0.0328 | -7 | c.263 others(24): Show |
LEKR1 | ENSG00000197980.14 | transcript | ENST00000356539.9 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LEMD1_chr1_205376378_205427056 | 205411085 | AAAAGAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(284): Show |
a0001a0003a0004others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0006t0001a0001c0011t0001others(7): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(266): Show | 287 | 390 | 0.7359 | -7 | c.270 others(24): Show |
LEMD1 | ENSG00000186007.10 | transcript | ENST00000367153.9 | protein_coding | 4/5 | chr1 | TogoVar | ||||||
LEMD3_chr12_65164583_65253355 | 65194703 | CTTAGCAG | C | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG02080.hp1 others(35): Show |
a0001 | a0001c0003 | a0001c0003t0003a0001c0003t0007 | a0001c0003t0003g0003a0001c0003t0003g0014a0001c0003t0003g0046others(31): Show | 38 | 398 | 0.0955 | -7 | c.152 others(28): Show |
LEMD3 | ENSG00000174106.3 | transcript | ENST00000308330.3 | protein_coding | 1/12 | chr12 | TogoVar | ||||||
LEMD3_chr12_65164583_65253355 | 65194777 | TTGGGGAA | T | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG02080.hp1 others(35): Show |
a0001 | a0001c0003 | a0001c0003t0003a0001c0003t0007 | a0001c0003t0003g0003a0001c0003t0003g0014a0001c0003t0003g0046others(31): Show | 38 | 398 | 0.0955 | -7 | c.152 others(28): Show |
LEMD3 | ENSG00000174106.3 | transcript | ENST00000308330.3 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
LEMD3_chr12_65164583_65253355 | 65251863 | CTTTTTTT | C | downstream_gene_variant | MODIFIER | HG01496.hp2 HG01928.hp2 HG01981.hp1 others(4): Show |
a0001 | a0001c0001a0001c0013 | a0001c0001t0002a0001c0013t0002 | a0001c0001t0002g0103a0001c0001t0002g0108a0001c0001t0002g0109others(4): Show | 7 | 398 | 0.0176 | -7 | c.*55 others(18): Show |
LEMD3 | ENSG00000174106.3 | transcript | ENST00000308330.3 | protein_coding | 3509 | chr12 | TogoVar | ||||||
LEPR_chr1_65415668_65646559 | 65472474 | ATACTTTT | A | intron_variant | MODIFIER | HG01192.hp2 HG02258.hp1 HG03139.hp1 others(2): Show |
a0001a0003a0005 | a0001c0001a0003c0011a0005c0007 | a0001c0001t0011a0003c0011t0015a0003c0011t0019others(1): Show | a0001c0001t0011g0214a0001c0001t0011g0216a0003c0011t0015g0093others(2): Show | 5 | 216 | 0.0232 | -7 | c.-21 others(26): Show |
LEPR | ENSG00000116678.20 | transcript | ENST00000349533.11 | protein_coding | 2/19 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LETM2_chr8_38381476_38414527 | 38390671 | TTTTTTTG | T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(92): Show |
a0001a0002a0003 | a0001c0001a0002c0008a0003c0005 | a0001c0001t0001a0001c0001t0003a0002c0008t0001others(1): Show | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0014others(58): Show | 95 | 364 | 0.2610 | -7 | c.48- others(22): Show |
LETM2 | ENSG00000165046.13 | transcript | ENST00000379957.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
LETM2_chr8_38381476_38414527 | 38410195 | ATTTTTTT | A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(79): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0007others(47): Show | 82 | 364 | 0.2253 | -7 | c.*19 others(18): Show |
LETM2 | ENSG00000165046.13 | transcript | ENST00000379957.9 | protein_coding | 669 | chr8 | TogoVar | ||||||
LEXM_chr1_54801063_54847252 | 54813672 | CCCGGCCT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(376): Show |
a0001a0002a0003others(9): Show | a0001c0002a0001c0003a0001c0004others(19): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0005others(27): Show | a0001c0002t0001g0078a0001c0002t0002g0005a0001c0002t0002g0009others(287): Show | 379 | 382 | 0.9922 | -7 | c.763 others(22): Show |
LEXM | ENSG00000162398.12 | transcript | ENST00000371273.4 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LEXM_chr1_54801063_54847252 | 54821886 | CTTTTTTT | C | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG01884.hp2 others(25): Show |
a0001a0002a0004 | a0001c0002a0002c0010a0004c0008 | a0001c0002t0002a0001c0002t0005a0002c0010t0001others(1): Show | a0001c0002t0002g0009a0001c0002t0002g0011a0001c0002t0002g0026others(17): Show | 28 | 382 | 0.0733 | -7 | c.118 others(26): Show |
LEXM | ENSG00000162398.12 | transcript | ENST00000371273.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LEXM_chr1_54801063_54847252 | 54844564 | CAAAAAAA | C | downstream_gene_variant | MODIFIER | HG01167.hp1 HG03654.hp1 NA18946.hp2 others(5): Show |
a0001a0002a0005others(1): Show | a0001c0002a0001c0003a0002c0005others(2): Show | a0001c0002t0001a0001c0003t0003a0002c0005t0004others(2): Show | a0001c0002t0001g0078a0001c0003t0003g0021a0001c0003t0003g0225others(4): Show | 8 | 382 | 0.0209 | -7 | c.*26 others(18): Show |
LEXM | ENSG00000162398.12 | transcript | ENST00000371273.4 | protein_coding | 2313 | chr1 | TogoVar | ||||||
LFNG_chr7_2514774_2533429 | 2533376 | ATTTTTTT | A | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02109.hp2 HG02559.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001a0001c0001t0002g0001a0001c0001t0002g0006others(2): Show | 8 | 414 | 0.0193 | -7 | c.*61 others(18): Show |
LFNG | ENSG00000106003.14 | transcript | ENST00000222725.10 | protein_coding | 4948 | chr7 | TogoVar | ||||||
LGALS3BP_chr17_78966255_78984923 | 78975791 | CAAAAAAA | C | intron_variant | MODIFIER | HG00673.hp1 HG01123.hp2 HG01168.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008a0001c0001t0001g0028a0001c0001t0001g0030others(4): Show | 21 | 456 | 0.0461 | -7 | c.244 others(22): Show |
LGALS3BP | ENSG00000108679.13 | transcript | ENST00000262776.8 | protein_coding | 3/5 | chr17 | TogoVar | ||||||
LGALS4_chr19_38796674_38817945 | 38811490 | ATAAAAAT | A | intron_variant | MODIFIER | HG00099.hp2 HG00735.hp2 HG01070.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0001g0053others(9): Show | 15 | 426 | 0.0352 | -7 | c.134 others(22): Show |
LGALS4 | ENSG00000171747.9 | transcript | ENST00000307751.9 | protein_coding | 2/9 | chr19 | TogoVar | ||||||
LGALS8_chr1_236518982_236557981 | 236532847 | GAAAAACA | G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(259): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0004a0001c0010others(9): Show | a0001c0001t0001a0001c0004t0013a0001c0004t0026others(31): Show | a0001c0001t0001g0101a0001c0004t0013g0105a0001c0004t0013g0116others(161): Show | 262 | 450 | 0.5822 | -7 | c.46- others(22): Show |
LGALS8 | ENSG00000116977.19 | transcript | ENST00000366584.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |