regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LGI1_chr10_93752936_93803159 | 93771975 | CAAAAAAA | C | intron_variant | MODIFIER | HG02109.hp2 HG02572.hp1 HG02572.hp2 others(11): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0042a0001c0001t0001g0043a0001c0001t0001g0058others(11): Show | 14 | 376 | 0.0372 | -7 | c.288 others(24): Show |
LGI1 | ENSG00000108231.14 | transcript | ENST00000371418.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LGI2_chr4_24993847_25035946 | 25014830 | CAAAAAAA | C | intron_variant | MODIFIER | HG01243.hp2 HG02257.hp1 HG02486.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005 | a0001c0001t0003g0207a0001c0001t0005g0004a0001c0001t0005g0130others(4): Show | 9 | 454 | 0.0198 | -7 | c.656 others(24): Show |
LGI2 | ENSG00000153012.12 | transcript | ENST00000382114.9 | protein_coding | 6/7 | chr4 | TogoVar | ||||||
LGI2_chr4_24993847_25035946 | 25014850 | AAAAAGAG | A | intron_variant | MODIFIER | HG01891.hp1 HG03195.hp1 NA18522.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0013a0001c0001t0019 | a0001c0001t0003g0204a0001c0001t0003g0205a0001c0001t0003g0206others(3): Show | 6 | 454 | 0.0132 | -7 | c.656 others(24): Show |
LGI2 | ENSG00000153012.12 | transcript | ENST00000382114.9 | protein_coding | 6/7 | chr4 | TogoVar | ||||||
LGMN_chr14_92698809_92753627 | 92730933 | CAAAAAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00408.hp2 others(92): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(1): Show | a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0016others(90): Show | 95 | 420 | 0.2262 | -7 | c.138 others(24): Show |
LGMN | ENSG00000100600.15 | transcript | ENST00000334869.9 | protein_coding | 2/13 | chr14 | TogoVar | ||||||
LGR6_chr1_202188799_202324761 | 202254899 | CAAAAAAA | C | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00438.hp1 others(131): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0005a0001c0014others(13): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(16): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(131): Show | 134 | 262 | 0.5115 | -7 | c.428 others(26): Show |
LGR6 | ENSG00000133067.18 | transcript | ENST00000367278.8 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LGSN_chr6_63270951_63324983 | 63288263 | AAATAAAT | A | intron_variant | MODIFIER | HG00558.hp2 HG01192.hp1 HG01256.hp2 others(3): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0003a0001c0010t0003 | a0001c0001t0003g0027a0001c0001t0003g0175a0001c0001t0003g0207others(1): Show | 6 | 312 | 0.0192 | -7 | c.164 others(24): Show |
LGSN | ENSG00000146166.17 | transcript | ENST00000370657.9 | protein_coding | 2/3 | chr6 | TogoVar | ||||||
LHFPL1_chrX_112625648_112684938 | 112643378 | CAAAAAAA | C | intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0077 | 1 | 245 | 0.0041 | -7 | c.482 others(26): Show |
LHFPL1 | ENSG00000182508.14 | transcript | ENST00000371968.8 | protein_coding | 3/3 | chrX | TogoVar | ||||||
LHFPL1_chrX_112625648_112684938 | 112658437 | AAAAAAAG | A | intron_variant | MODIFIER | HG02280.hp2 NA20300.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0025 | 2 | 245 | 0.0082 | -7 | c.481 others(24): Show |
LHFPL1 | ENSG00000182508.14 | transcript | ENST00000371968.8 | protein_coding | 3/3 | chrX | TogoVar | ||||||
LHFPL2_chr5_78480230_78653772 | 78520802 | GGCTAACT | G | intron_variant | MODIFIER | HG01109.hp1 HG01496.hp2 HG01884.hp2 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(8): Show | a0001c0001t0001g0023a0001c0001t0001g0108a0001c0001t0001g0109others(14): Show | 17 | 254 | 0.0669 | -7 | c.-18 others(28): Show |
LHFPL2 | ENSG00000145685.14 | transcript | ENST00000380345.7 | protein_coding | 3/4 | chr5 | TogoVar | ||||||
LHFPL3_chr7_104323603_104913561 | 104400104 | CAAAAAAA | C | intron_variant | MODIFIER | HG00733.hp2 HG01070.hp2 HG02293.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0042a0001c0001t0001g0064a0001c0001t0001g0069others(11): Show | 14 | 86 | 0.1628 | -7 | c.445 others(26): Show |
LHFPL3 | ENSG00000187416.13 | transcript | ENST00000424859.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LHFPL3_chr7_104323603_104913561 | 104597075 | ACCTGTTT | A | intron_variant | MODIFIER | NA18947.hp1 NA18986.hp1 NA19085.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0008 | a0001c0001t0003g0029a0001c0001t0004g0079a0001c0001t0008g0022 | 3 | 86 | 0.0349 | -7 | c.446 others(28): Show |
LHFPL3 | ENSG00000187416.13 | transcript | ENST00000424859.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LHFPL3_chr7_104323603_104913561 | 104771816 | CTTTTTTT | C | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00733.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0060a0001c0001t0002g0037a0001c0001t0002g0051others(13): Show | 16 | 86 | 0.1861 | -7 | c.682 others(26): Show |
LHFPL3 | ENSG00000187416.13 | transcript | ENST00000424859.7 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LHFPL3_chr7_104323603_104913561 | 104875241 | AGCCCCAT | A | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00621.hp2 others(13): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0039a0001c0001t0001g0043a0001c0001t0002g0001others(13): Show | 16 | 86 | 0.1861 | -7 | c.683 others(26): Show |
LHFPL3 | ENSG00000187416.13 | transcript | ENST00000424859.7 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LHFPL4_chr3_9493361_9558822 | 9498203 | CTTTTTTT | C | downstream_gene_variant | MODIFIER | HG01081.hp1 HG02451.hp1 HG02572.hp2 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0166others(23): Show | 27 | 360 | 0.0750 | -7 | c.*40 others(18): Show |
LHFPL4 | ENSG00000156959.9 | transcript | ENST00000287585.8 | protein_coding | 157 | chr3 | TogoVar | ||||||
LHFPL4_chr3_9493361_9558822 | 9545627 | AATTGTTT | A | intron_variant | MODIFIER | NA18954.hp1 NA18964.hp1 NA18975.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0082a0001c0001t0002g0083a0001c0001t0003g0080others(1): Show | 4 | 360 | 0.0111 | -7 | c.406 others(24): Show |
LHFPL4 | ENSG00000156959.9 | transcript | ENST00000287585.8 | protein_coding | 2/3 | chr3 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39381826 | CAAAAAAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00323.hp2 others(140): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(25): Show | a0001c0001t0001g0023a0001c0001t0001g0054a0001c0001t0001g0069others(139): Show | 143 | 242 | 0.5909 | -7 | c.386 others(24): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 2/3 | chr13 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39418382 | CTTTTTTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00438.hp1 others(40): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0054a0001c0001t0001g0069a0001c0001t0001g0107others(40): Show | 43 | 242 | 0.1777 | -7 | c.386 others(26): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 2/3 | chr13 | TogoVar | ||||||
LHFPL6_chr13_39337892_39608193 | 39441137 | ATTTTTTT | A | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00609.hp1 others(28): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0072a0001c0001t0001g0110a0001c0001t0001g0138others(28): Show | 31 | 242 | 0.1281 | -7 | c.386 others(26): Show |
LHFPL6 | ENSG00000183722.9 | transcript | ENST00000379589.4 | protein_coding | 2/3 | chr13 | TogoVar | ||||||
LHFPL7_chr22_24930098_24951694 | 24939924 | CTTTTTTT | C | intron_variant | MODIFIER | HG01109.hp2 HG01243.hp2 HG02258.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0056a0001c0001t0001g0057a0001c0001t0001g0253others(4): Show | 9 | 420 | 0.0214 | -7 | c.-17 others(22): Show |
LHFPL7 | ENSG00000206069.7 | transcript | ENST00000640159.2 | protein_coding | 1/3 | chr22 | TogoVar | ||||||
LHFPL7_chr22_24930098_24951694 | 24947323 | TTTTTGTA | T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(125): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(82): Show | 128 | 420 | 0.3048 | -7 | c.-77 others(16): Show |
LHFPL7 | ENSG00000206069.7 | transcript | ENST00000640159.2 | protein_coding | 630 | chr22 | TogoVar | ||||||
LHPP_chr10_124456823_124619141 | 124502667 | CTTTTTTT | C | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp1 HG02615.hp2 others(10): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0002 | a0001c0001t0001g0045a0001c0001t0001g0094a0001c0001t0001g0097others(10): Show | 13 | 260 | 0.0500 | -7 | c.624 others(24): Show |
LHPP | ENSG00000107902.14 | transcript | ENST00000368842.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LHPP_chr10_124456823_124619141 | 124580721 | CTTTTTTT | C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00642.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0014 | a0001c0001t0001g0033a0001c0001t0001g0061a0001c0001t0001g0085others(10): Show | 13 | 260 | 0.0500 | -7 | c.717 others(26): Show |
LHPP | ENSG00000107902.14 | transcript | ENST00000368842.10 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LHPP_chr10_124456823_124619141 | 124587738 | TAAAAAAA | T | intron_variant | MODIFIER | HG00323.hp2 HG00639.hp1 HG01123.hp1 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0018others(3): Show | a0001c0001t0001g0046a0001c0001t0001g0050a0001c0001t0001g0057others(18): Show | 21 | 260 | 0.0808 | -7 | c.717 others(26): Show |
LHPP | ENSG00000107902.14 | transcript | ENST00000368842.10 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LHX8_chr1_75129388_75166533 | 75137536 | CTGGCTTG | C | intron_variant | MODIFIER | NA18939.hp1 NA18949.hp1 NA18960.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0011a0001c0002t0002g0061a0001c0002t0002g0062others(1): Show | 6 | 314 | 0.0191 | -7 | c.237 others(22): Show |
LHX8 | ENSG00000162624.16 | transcript | ENST00000356261.4 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LIFR_chr5_38469668_38561646 | 38494445 | CCAAGGGG | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(183): Show |
a0001a0002a0006others(4): Show | a0001c0001a0001c0007a0001c0015others(6): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0012others(29): Show | a0001c0001t0001g0003a0001c0001t0001g0006a0001c0001t0001g0007others(171): Show | 186 | 374 | 0.4973 | -7 | c.188 others(24): Show |
LIFR | ENSG00000113594.10 | transcript | ENST00000453190.7 | protein_coding | 13/19 | chr5 | TogoVar | ||||||
LIG1_chr19_48110445_48175344 | 48167825 | TAAAAAAA | T | intron_variant | MODIFIER | HG00621.hp1 HG02135.hp2 NA18961.hp2 others(10): Show |
a0001 | a0001c0003a0001c0004 | a0001c0003t0002a0001c0004t0001 | a0001c0003t0002g0028a0001c0003t0002g0029a0001c0003t0002g0030others(10): Show | 13 | 330 | 0.0394 | -7 | c.-57 others(24): Show |
LIG1 | ENSG00000105486.15 | transcript | ENST00000263274.12 | protein_coding | 1/27 | chr19 | TogoVar | ||||||
LILRA6_chr19_54231590_54247790 | 54246397 | TATATATA | T | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02451.hp1 HG02622.hp2 others(15): Show |
a0004a0009a0011others(4): Show | a0004c0004a0009c0014a0011c0013others(4): Show | a0004c0004t0006a0004c0004t0020a0004c0004t0062others(6): Show | a0004c0004t0006g0011a0004c0004t0006g0137a0004c0004t0006g0163others(9): Show | 18 | 450 | 0.0400 | -7 | c.-36 others(18): Show |
LILRA6 | ENSG00000244482.11 | transcript | ENST00000396365.7 | protein_coding | 3608 | chr19 | TogoVar | ||||||
LILRB4_chr19_54657985_54673718 | 54664138 | TGTGGGAG | T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00639.hp2 others(35): Show |
a0006a0007a0009others(8): Show | a0006c0005a0007c0007a0009c0008others(8): Show | a0006c0005t0001a0007c0007t0001a0009c0008t0001others(9): Show | a0006c0005t0001g0051a0006c0005t0001g0054a0006c0005t0001g0188others(27): Show | 38 | 487 | 0.0780 | -7 | c.356 others(20): Show |
LILRB4 | ENSG00000186818.13 | transcript | ENST00000695418.1 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
LILRB5_chr19_54244421_54262273 | 54246397 | TATATATA | T | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02451.hp2 HG02622.hp1 others(15): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0003a0001c0001t0008a0001c0001t0025others(6): Show | a0001c0001t0003g0080a0001c0001t0008g0018a0001c0001t0008g0033others(8): Show | 18 | 474 | 0.0380 | -7 | c.*43 others(18): Show |
LILRB5 | ENSG00000105609.17 | transcript | ENST00000449561.3 | protein_coding | 3023 | chr19 | TogoVar | ||||||
LIM2_chr19_51374909_51392974 | 51392292 | CAAAAAAA | C | upstream_gene_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG00558.hp2 others(150): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0005 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(2): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0006others(35): Show | 153 | 438 | 0.3493 | -7 | c.-43 others(18): Show |
LIM2 | ENSG00000105370.8 | transcript | ENST00000596399.2 | protein_coding | 4319 | chr19 | TogoVar | ||||||
LIMA1_chr12_50170788_50288520 | 50190011 | ATTTTTTT | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00673.hp2 others(47): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0021a0001c0001t0002g0006a0001c0001t0002g0007others(47): Show | 50 | 294 | 0.1701 | -7 | c.114 others(26): Show |
LIMA1 | ENSG00000050405.14 | transcript | ENST00000341247.9 | protein_coding | 9/10 | chr12 | TogoVar | ||||||
LIMA1_chr12_50170788_50288520 | 50241933 | ATTTTTTT | A | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG02280.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0044a0001c0001t0001g0219a0001c0001t0001g0220others(7): Show | 10 | 294 | 0.0340 | -7 | c.119 others(24): Show |
LIMA1 | ENSG00000050405.14 | transcript | ENST00000341247.9 | protein_coding | 2/10 | chr12 | TogoVar | ||||||
LIMA1_chr12_50170788_50288520 | 50269918 | CAAATAAA | C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG01109.hp1 others(30): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0100a0001c0001t0002g0059a0001c0001t0002g0066others(30): Show | 33 | 294 | 0.1122 | -7 | c.-24 others(26): Show |
LIMA1 | ENSG00000050405.14 | transcript | ENST00000341247.9 | protein_coding | 1/10 | chr12 | TogoVar | ||||||
LIMD1_chr3_45589751_45691341 | 45654812 | CAAAAAAA | C | intron_variant | MODIFIER | HG00558.hp1 HG00609.hp2 HG02015.hp2 others(15): Show |
a0001a0005 | a0001c0001a0005c0012 | a0001c0001t0010a0001c0001t0040a0001c0001t0041others(10): Show | a0001c0001t0010g0051a0001c0001t0010g0052a0001c0001t0010g0053others(15): Show | 18 | 358 | 0.0503 | -7 | c.151 others(28): Show |
LIMD1 | ENSG00000144791.10 | transcript | ENST00000273317.5 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LIME1_chr20_63731664_63744103 | 63732340 | GGTGAGGT | G | upstream_gene_variant | MODIFIER | HG01109.hp2 HG02280.hp1 HG03579.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 3 | 394 | 0.0076 | -7 | c.-43 others(18): Show |
LIME1 | ENSG00000203896.10 | transcript | ENST00000309546.8 | protein_coding | 4323 | chr20 | TogoVar | ||||||
LIMK1_chr7_74078804_74127525 | 74118880 | ATTTTGTT | A | intron_variant | MODIFIER | HG01243.hp2 HG01891.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0172a0001c0001t0001g0260a0001c0001t0001g0261others(2): Show | 5 | 302 | 0.0166 | -7 | c.156 others(26): Show |
LIMK1 | ENSG00000106683.15 | transcript | ENST00000336180.7 | protein_coding | 13/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LIMK2_chr22_31207298_31285080 | 31246765 | AAAAAAAC | A | intron_variant | MODIFIER | HG02055.hp2 HG02886.hp1 HG02896.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0249a0002c0002t0001g0250a0002c0002t0001g0251others(3): Show | 6 | 358 | 0.0168 | -7 | c.117 others(26): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
LIMK2_chr22_31207298_31285080 | 31247230 | TCCAGCAG | T | intron_variant | MODIFIER | HG01070.hp1 HG01070.hp2 HG01071.hp2 others(64): Show |
a0002a0003 | a0002c0002a0002c0009a0003c0006others(1): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0010others(5): Show | a0002c0002t0001g0005a0002c0002t0001g0007a0002c0002t0001g0019others(62): Show | 67 | 358 | 0.1872 | -7 | c.117 others(26): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
LIMK2_chr22_31207298_31285080 | 31257040 | ATTTTTTT | A | intron_variant | MODIFIER | HG00558.hp1 HG00558.hp2 HG00609.hp1 others(68): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(4): Show | a0001c0001t0001g0016a0001c0001t0001g0286a0001c0001t0001g0294others(66): Show | 71 | 358 | 0.1983 | -7 | c.117 others(24): Show |
LIMK2 | ENSG00000182541.18 | transcript | ENST00000331728.9 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
LIMS1_chr2_108529470_108692246 | 108549279 | CTTTTTTT | C | intron_variant | MODIFIER | HG01169.hp2 HG02040.hp2 NA18969.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0012a0001c0002t0025others(1): Show | a0001c0002t0001g0023a0001c0002t0001g0027a0001c0002t0012g0006others(3): Show | 6 | 246 | 0.0244 | -7 | c.32+ others(24): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LIMS1_chr2_108529470_108692246 | 108650065 | GACCTGCT | G | intron_variant | MODIFIER | HG01261.hp2 NA18954.hp2 NA18970.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0009 | a0001c0002t0009g0078a0001c0002t0009g0079a0001c0002t0009g0080others(1): Show | 4 | 246 | 0.0163 | -7 | c.33- others(22): Show |
LIMS1 | ENSG00000169756.17 | transcript | ENST00000544547.6 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
LIMS2_chr2_127633426_127680530 | 127662629 | TGGGGTGG | T | intron_variant | MODIFIER | HG00140.hp1 HG01884.hp2 HG01891.hp1 others(25): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0005a0001c0001t0010a0001c0001t0011others(15): Show | a0001c0001t0005g0065a0001c0001t0010g0132a0001c0001t0010g0133others(25): Show | 28 | 348 | 0.0805 | -7 | c.12- others(22): Show |
LIMS2 | ENSG00000072163.20 | transcript | ENST00000355119.9 | protein_coding | 1/9 | chr2 | TogoVar | ||||||
LIMS2_chr2_127633426_127680530 | 127662655 | TGGGGGGA | T | intron_variant | MODIFIER | HG00544.hp2 HG00673.hp1 HG01069.hp2 others(45): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0005a0001c0001t0007a0001c0001t0012others(9): Show | a0001c0001t0005g0001a0001c0001t0005g0002a0001c0001t0005g0007others(36): Show | 48 | 348 | 0.1379 | -7 | c.12- others(22): Show |
LIMS2 | ENSG00000072163.20 | transcript | ENST00000355119.9 | protein_coding | 1/9 | chr2 | TogoVar | ||||||
LIN28A_chr1_26405817_26434728 | 26405977 | TAAAAAAA | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG01070.hp1 others(11): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0076a0001c0001t0002g0235a0001c0001t0002g0236others(6): Show | 14 | 376 | 0.0372 | -7 | c.-49 others(18): Show |
LIN28A | ENSG00000131914.11 | transcript | ENST00000326279.11 | protein_coding | 4839 | chr1 | TogoVar | ||||||
LIN28A_chr1_26405817_26434728 | 26423413 | CTTTTTTT | C | intron_variant | MODIFIER | HG01099.hp2 HG01884.hp2 HG02280.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012a0001c0001t0018 | a0001c0001t0001g0045a0001c0001t0001g0066a0001c0001t0001g0127others(6): Show | 10 | 376 | 0.0266 | -7 | c.229 others(24): Show |
LIN28A | ENSG00000131914.11 | transcript | ENST00000326279.11 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
LIN52_chr14_74079956_74206493 | 74080044 | ACAAAAAC | A | upstream_gene_variant | MODIFIER | HG01243.hp2 HG02486.hp2 HG02698.hp1 others(7): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0004a0001c0001t0007a0001c0001t0012others(4): Show | a0001c0001t0004g0077a0001c0001t0007g0122a0001c0001t0012g0078others(7): Show | 10 | 354 | 0.0283 | -7 | c.-49 others(18): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 4911 | chr14 | TogoVar | ||||||
LIN52_chr14_74079956_74206493 | 74103733 | GTTTTTTT | G | intron_variant | MODIFIER | HG01069.hp1 HG01123.hp2 HG01169.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(6): Show | a0001c0001t0003g0007a0001c0001t0003g0015a0001c0001t0003g0019others(16): Show | 19 | 354 | 0.0537 | -7 | c.283 others(24): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LIN52_chr14_74079956_74206493 | 74116302 | CAAAAAAT | C | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp1 HG00544.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0010others(2): Show | a0001c0001t0001g0097a0001c0001t0001g0110a0001c0001t0007g0004others(23): Show | 26 | 354 | 0.0735 | -7 | c.283 others(26): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LIN52_chr14_74079956_74206493 | 74171736 | CTTTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00558.hp1 others(78): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0205a0001c0001t0001g0213a0001c0001t0001g0214others(78): Show | 81 | 354 | 0.2288 | -7 | c.284 others(26): Show |
LIN52 | ENSG00000205659.12 | transcript | ENST00000555028.7 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LIN54_chr4_82919603_83015823 | 82979939 | CAAAAAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG00438.hp1 others(61): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(4): Show | a0001c0001t0003g0131a0001c0001t0003g0132a0001c0001t0003g0134others(61): Show | 64 | 304 | 0.2105 | -7 | c.685 others(22): Show |
LIN54 | ENSG00000189308.11 | transcript | ENST00000340417.8 | protein_coding | 2/12 | chr4 | TogoVar |