regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LIN7A_chr12_80787520_80942934 | 80819733 | TTAGTTTA | T | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(148): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(12): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(148): Show | 151 | 292 | 0.5171 | -7 | c.484 others(24): Show |
LIN7A | ENSG00000111052.8 | transcript | ENST00000552864.6 | protein_coding | 4/5 | chr12 | TogoVar | ||||||
LIN9_chr1_226226157_226314164 | 226226674 | CAAAAAAA | C | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00408.hp2 others(81): Show |
a0001a0002 | a0001c0002a0001c0004a0002c0003 | a0001c0002t0002a0001c0002t0004a0001c0002t0007others(2): Show | a0001c0002t0002g0001a0001c0002t0002g0002a0001c0002t0002g0006others(81): Show | 84 | 364 | 0.2308 | -7 | c.*58 others(18): Show |
LIN9 | ENSG00000183814.16 | transcript | ENST00000681046.1 | protein_coding | 4482 | chr1 | TogoVar | ||||||
LIN9_chr1_226226157_226314164 | 226260628 | GTTTTTTT | G | intron_variant | MODIFIER | HG01081.hp2 HG02809.hp1 HG03139.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005 | a0001c0001t0001g0022a0001c0001t0001g0089a0001c0001t0001g0298others(4): Show | 7 | 364 | 0.0192 | -7 | c.103 others(26): Show |
LIN9 | ENSG00000183814.16 | transcript | ENST00000681046.1 | protein_coding | 10/14 | chr1 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 27992201 | CATATATA | C | intron_variant | MODIFIER | HG00438.hp2 HG00639.hp2 HG01074.hp2 others(23): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0016a0001c0001t0001g0017a0001c0001t0001g0018others(23): Show | 26 | 62 | 0.4194 | -7 | c.-35 others(26): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 6/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28054787 | CTTAATTT | C | intron_variant | MODIFIER | HG00741.hp2 HG02630.hp2 HG02809.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0015a0001c0001t0021a0001c0003t0009 | a0001c0001t0015g0012a0001c0001t0021g0051a0001c0003t0009g0036 | 3 | 62 | 0.0484 | -7 | c.-35 others(28): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 6/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28077789 | AAGAGAAG | A | intron_variant | MODIFIER | HG02572.hp1 HG02602.hp2 HG02630.hp1 others(4): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0005a0001c0001t0008a0001c0001t0013others(3): Show | a0001c0001t0005g0057a0001c0001t0005g0059a0001c0001t0008g0020others(4): Show | 7 | 62 | 0.1129 | -7 | c.-35 others(28): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 6/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28744633 | TGTGTGTA | T | intron_variant | MODIFIER | NA18990.hp1 NA18995.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0043a0001c0001t0002g0044 | 2 | 62 | 0.0323 | -7 | c.-39 others(28): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 28790325 | CTTTTTTT | C | intron_variant | MODIFIER | HG00408.hp2 HG01074.hp2 HG01261.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(1): Show | a0001c0001t0001g0047a0001c0001t0001g0048a0001c0001t0003g0049others(2): Show | 5 | 62 | 0.0807 | -7 | c.-39 others(30): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 2/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 29085281 | TAAAAAAA | T | intron_variant | MODIFIER | HG00642.hp1 HG02572.hp1 HG02895.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0006a0001c0001t0012others(1): Show | a0001c0001t0005g0059a0001c0001t0006g0003a0001c0001t0006g0004others(2): Show | 5 | 62 | 0.0807 | -7 | c.-49 others(30): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 1/6 | chr9 | TogoVar | ||||||
LINGO2_chr9_27932617_29218601 | 29116445 | CCTTTTAT | C | intron_variant | MODIFIER | HG00408.hp2 HG01261.hp1 NA19060.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0047a0001c0001t0001g0048a0001c0001t0003g0049 | 3 | 62 | 0.0484 | -7 | c.-49 others(28): Show |
LINGO2 | ENSG00000174482.11 | transcript | ENST00000698399.1 | protein_coding | 1/6 | chr9 | TogoVar | ||||||
LIPA_chr10_89208572_89256775 | 89247379 | CAAAAAAA | C | intron_variant | MODIFIER | HG00423.hp2 HG01069.hp1 HG01106.hp2 others(35): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0034a0001c0001t0001g0105a0001c0001t0001g0108others(34): Show | 38 | 384 | 0.0990 | -7 | c.111 others(22): Show |
LIPA | ENSG00000107798.18 | transcript | ENST00000336233.10 | protein_coding | 2/9 | chr10 | TogoVar | ||||||
LIPG_chr18_49557057_49604185 | 49572320 | CAAAAATA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(64): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0015others(17): Show | a0001c0001t0001g0052a0001c0001t0001g0175a0001c0001t0001g0206others(63): Show | 67 | 384 | 0.1745 | -7 | c.571 others(24): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49587568 | CAAAAAAA | C | intron_variant | MODIFIER | HG02071.hp1 HG02258.hp2 HG02451.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0038a0001c0001t0039a0001c0001t0094others(2): Show | a0001c0001t0038g0025a0001c0001t0038g0172a0001c0001t0039g0178others(4): Show | 7 | 384 | 0.0182 | -7 | c.148 others(24): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LIPG_chr18_49557057_49604185 | 49600908 | CAGGTACT | C | downstream_gene_variant | MODIFIER | HG02559.hp2 HG02647.hp2 HG03195.hp1 |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0006 | a0001c0001t0024a0002c0002t0070a0004c0006t0075 | a0001c0001t0024g0047a0002c0002t0070g0345a0004c0006t0075g0264 | 3 | 384 | 0.0078 | -7 | c.*10 others(20): Show |
LIPG | ENSG00000101670.12 | transcript | ENST00000261292.9 | protein_coding | 1724 | chr18 | TogoVar | ||||||
LIPH_chr3_185501262_185557588 | 185554581 | CTTTTTTT | C | upstream_gene_variant | MODIFIER | HG00423.hp1 HG02602.hp2 HG03831.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(2): Show | a0001c0001t0002g0008a0001c0001t0002g0012a0001c0001t0002g0027others(6): Show | 9 | 358 | 0.0251 | -7 | c.-21 others(18): Show |
LIPH | ENSG00000163898.10 | transcript | ENST00000296252.9 | protein_coding | 1994 | chr3 | TogoVar | ||||||
LIPM_chr10_88797730_88825546 | 88822544 | CTTTTTTT | C | downstream_gene_variant | MODIFIER | HG00639.hp1 HG01168.hp1 HG01169.hp2 others(35): Show |
a0001a0002a0006 | a0001c0001a0002c0003a0006c0017 | a0001c0001t0002a0002c0003t0002a0006c0017t0002 | a0001c0001t0002g0025a0001c0001t0002g0047a0001c0001t0002g0048others(18): Show | 38 | 462 | 0.0823 | -7 | c.*20 others(18): Show |
LIPM | ENSG00000173239.14 | transcript | ENST00000404743.9 | protein_coding | 1999 | chr10 | TogoVar | ||||||
LLCFC1_chr7_142934484_142945868 | 142940151 | GTGTGTGT | G | intron_variant | MODIFIER | HG03492.hp1 HG03942.hp2 NA18980.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 | 3 | 277 | 0.0108 | -7 | c.134 others(22): Show |
LLCFC1 | ENSG00000165131.8 | transcript | ENST00000409607.5 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
LMAN1_chr18_59322823_59364265 | 59346209 | CTTTTTTT | C | intron_variant | MODIFIER | HG02486.hp1 HG02895.hp2 HG02897.hp1 others(9): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0007 | a0001c0001t0001g0009a0001c0001t0001g0114a0001c0001t0001g0122others(5): Show | 12 | 386 | 0.0311 | -7 | c.823 others(22): Show |
LMAN1 | ENSG00000074695.6 | transcript | ENST00000251047.6 | protein_coding | 7/12 | chr18 | TogoVar | ||||||
LMAN2_chr5_177326567_177356668 | 177326935 | GAAAAGAA | G | downstream_gene_variant | MODIFIER | HG01109.hp2 HG02055.hp2 HG02109.hp1 others(10): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0002a0004c0004t0001 | a0001c0001t0002g0006a0001c0001t0002g0038a0001c0001t0002g0040others(9): Show | 13 | 376 | 0.0346 | -7 | c.*51 others(18): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 4631 | chr5 | TogoVar | ||||||
LMAN2_chr5_177326567_177356668 | 177353245 | CAAAAAAA | C | upstream_gene_variant | MODIFIER | HG01167.hp2 HG01884.hp1 HG01891.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0220a0001c0001t0002g0006a0001c0001t0002g0021others(8): Show | 20 | 376 | 0.0532 | -7 | c.-16 others(18): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 1578 | chr5 | TogoVar | ||||||
LMBR1L_chr12_49092139_49115847 | 49111930 | TTTGTGTG | T | upstream_gene_variant | MODIFIER | HG00642.hp2 HG01168.hp1 HG01993.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(1): Show | 4 | 380 | 0.0105 | -7 | c.-13 others(18): Show |
LMBR1L | ENSG00000139636.16 | transcript | ENST00000267102.13 | protein_coding | 1084 | chr12 | TogoVar | ||||||
LMBR1_chr7_156672791_156898183 | 156806598 | CTTTTTTT | C | intron_variant | MODIFIER | HG01167.hp1 HG02622.hp1 HG02683.hp2 others(3): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0030a0001c0001t0152a0001c0005t0010others(3): Show | a0001c0001t0030g0122a0001c0001t0152g0118a0001c0005t0010g0066others(3): Show | 6 | 314 | 0.0191 | -7 | c.320 others(26): Show |
LMBR1 | ENSG00000105983.23 | transcript | ENST00000353442.10 | protein_coding | 4/16 | chr7 | TogoVar | ||||||
LMBR1_chr7_156672791_156898183 | 156858072 | CAAAAAAA | C | intron_variant | MODIFIER | HG02145.hp2 HG02615.hp1 HG02630.hp2 others(8): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0035a0001c0001t0040a0001c0001t0041others(3): Show | a0001c0001t0035g0123a0001c0001t0035g0125a0001c0001t0040g0126others(8): Show | 11 | 314 | 0.0350 | -7 | c.67- others(24): Show |
LMBR1 | ENSG00000105983.23 | transcript | ENST00000353442.10 | protein_coding | 1/16 | chr7 | TogoVar | ||||||
LMBR1_chr7_156672791_156898183 | 156891212 | ATATATAT | A | intron_variant | MODIFIER | HG02615.hp2 HG03130.hp1 HG03486.hp2 others(5): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0004a0001c0001t0016a0001c0001t0026others(3): Show | a0001c0001t0004g0054a0001c0001t0016g0047a0001c0001t0026g0049others(5): Show | 8 | 314 | 0.0255 | -7 | c.66+ others(22): Show |
LMBR1 | ENSG00000105983.23 | transcript | ENST00000353442.10 | protein_coding | 1/16 | chr7 | TogoVar | ||||||
LMBR1_chr7_156672791_156898183 | 156892844 | TCCGGGGA | T | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG01081.hp1 others(61): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(1): Show | a0001c0001t0004a0001c0001t0008a0001c0001t0009others(36): Show | a0001c0001t0004g0029a0001c0001t0004g0038a0001c0001t0004g0054others(61): Show | 64 | 314 | 0.2038 | -7 | c.66+ others(18): Show |
LMBR1 | ENSG00000105983.23 | transcript | ENST00000353442.10 | protein_coding | 1/16 | chr7 | TogoVar | ||||||
LMCD1_chr3_8496823_8579668 | 8522809 | TTTAAAAA | T | intron_variant | MODIFIER | HG01169.hp1 HG02109.hp1 HG02258.hp1 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0005a0001c0002t0008 | a0001c0002t0001g0227a0001c0002t0001g0245a0001c0002t0005g0226others(3): Show | 6 | 314 | 0.0191 | -7 | c.43- others(22): Show |
LMCD1 | ENSG00000071282.12 | transcript | ENST00000157600.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LMLN_chr3_197955217_198048720 | 198016194 | CAAAAAAA | C | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG02027.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0108a0001c0001t0003g0109a0001c0001t0003g0110others(21): Show | 24 | 258 | 0.0930 | -7 | c.132 others(26): Show |
LMLN | ENSG00000185621.11 | transcript | ENST00000420910.7 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LMNB1_chr5_126772136_126842020 | 126812718 | CTTTTTTT | C | intron_variant | MODIFIER | HG00323.hp2 HG01109.hp1 HG02040.hp1 others(15): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0004a0001c0003t0003 | a0001c0002t0004g0033a0001c0002t0004g0034a0001c0002t0004g0035others(14): Show | 18 | 374 | 0.0481 | -7 | c.939 others(22): Show |
LMNB1 | ENSG00000113368.12 | transcript | ENST00000261366.10 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
LMO1_chr11_8219309_8268878 | 8223028 | CTGGGCTG | C | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00544.hp2 HG00558.hp1 others(210): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0003a0001c0001t0001g0008a0001c0001t0001g0010others(188): Show | 213 | 424 | 0.5024 | -7 | c.*15 others(18): Show |
LMO1 | ENSG00000166407.14 | transcript | ENST00000335790.8 | protein_coding | 1280 | chr11 | TogoVar | ||||||
LMO1_chr11_8219309_8268878 | 8230807 | TCTATCCC | T | intron_variant | MODIFIER | HG02809.hp1 HG02970.hp1 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0064a0001c0001t0002g0378a0001c0001t0004g0307 | 3 | 424 | 0.0071 | -7 | c.26- others(20): Show |
LMO1 | ENSG00000166407.14 | transcript | ENST00000335790.8 | protein_coding | 1/3 | chr11 | TogoVar | ||||||
LMO2_chr11_33853576_33897076 | 33887540 | ATTTTTTT | A | intron_variant | MODIFIER | HG01884.hp1 HG02451.hp1 HG02886.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0003a0001c0002t0005 | a0001c0001t0002g0148a0001c0001t0002g0152a0001c0001t0002g0153others(3): Show | 6 | 442 | 0.0136 | -7 | c.-33 others(26): Show |
LMO2 | ENSG00000135363.12 | transcript | ENST00000257818.3 | protein_coding | 1/5 | chr11 | TogoVar | ||||||
LMO7_chr13_75631330_75864866 | 75633840 | CCTTTTTT | C | upstream_gene_variant | MODIFIER | HG02896.hp2 HG03041.hp1 NA18941.hp1 |
a0001a0013 | a0001c0001a0013c0018 | a0001c0001t0002a0013c0018t0004 | a0001c0001t0002g0013a0001c0001t0002g0035a0013c0018t0004g0010 | 3 | 272 | 0.0110 | -7 | c.-28 others(18): Show |
LMO7 | ENSG00000136153.20 | transcript | ENST00000377534.8 | protein_coding | 2489 | chr13 | TogoVar | ||||||
LMO7_chr13_75631330_75864866 | 75776143 | ATGCCATG | A | intron_variant | MODIFIER | HG03831.hp2 NA18940.hp2 NA18942.hp2 others(8): Show |
a0005 | a0005c0005 | a0005c0005t0001a0005c0005t0003a0005c0005t0004 | a0005c0005t0001g0125a0005c0005t0003g0112a0005c0005t0003g0124others(8): Show | 11 | 272 | 0.0404 | -7 | c.317 others(26): Show |
LMO7 | ENSG00000136153.20 | transcript | ENST00000377534.8 | protein_coding | 4/30 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
LMOD1_chr1_201891456_201951548 | 201910744 | CTTTTTTT | C | intron_variant | MODIFIER | HG00609.hp2 HG00735.hp2 HG02132.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004a0001c0001t0001g0072a0001c0001t0001g0131others(9): Show | 13 | 400 | 0.0325 | -7 | c.262 others(25): Show |
LMOD1 | ENSG00000163431.14 | transcript | ENST00000367288.5 | protein_coding | 1/2 | chr1 | TogoVar | ||||||
LMX1B_chr9_126608928_126706032 | 126621655 | CTTTTTTT | C | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG00735.hp2 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0010others(19): Show | a0001c0001t0002g0204a0001c0001t0002g0205a0001c0001t0002g0211others(25): Show | 29 | 342 | 0.0848 | -7 | c.326 others(24): Show |
LMX1B | ENSG00000136944.19 | transcript | ENST00000373474.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
LMX1B_chr9_126608928_126706032 | 126689721 | TGATGGGA | T | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00609.hp2 others(60): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002a0001c0002t0016others(24): Show | a0001c0002t0001g0007a0001c0002t0001g0011a0001c0002t0001g0016others(60): Show | 63 | 342 | 0.1842 | -7 | c.327 others(24): Show |
LMX1B | ENSG00000136944.19 | transcript | ENST00000373474.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
LNPEP_chr5_96931080_97042513 | 96944560 | CTTTTTTT | C | intron_variant | MODIFIER | HG00642.hp1 HG01074.hp2 HG01123.hp1 others(16): Show |
a0001a0003a0007 | a0001c0001a0003c0004a0007c0009 | a0001c0001t0020a0001c0001t0049a0003c0004t0012others(5): Show | a0001c0001t0020g0179a0001c0001t0020g0180a0001c0001t0020g0181others(16): Show | 19 | 352 | 0.0540 | -7 | c.19+ others(22): Show |
LNPEP | ENSG00000113441.16 | transcript | ENST00000231368.10 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
LNPEP_chr5_96931080_97042513 | 97008337 | GTTTTTTT | G | intron_variant | MODIFIER | HG00642.hp1 HG00735.hp2 HG01123.hp1 others(11): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0016a0002c0002t0001a0003c0004t0012others(5): Show | a0001c0001t0016g0192a0002c0002t0001g0299a0003c0004t0012g0142others(11): Show | 14 | 352 | 0.0398 | -7 | c.203 others(26): Show |
LNPEP | ENSG00000113441.16 | transcript | ENST00000231368.10 | protein_coding | 11/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
LNX2_chr13_27540913_27625529 | 27620425 | CGGCACCA | C | 5_prime_UTR_variant | MODIFIER | HG00642.hp1 HG00673.hp1 HG01109.hp2 others(31): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0005a0001c0001t0008a0001c0001t0012others(5): Show | a0001c0001t0005g0027a0001c0001t0005g0031a0001c0001t0005g0032others(31): Show | 34 | 358 | 0.0950 | -7 | c.-15 others(16): Show |
LNX2 | ENSG00000139517.9 | transcript | ENST00000316334.5 | protein_coding | 1/10 | 38723 | chr13 | TogoVar | |||||
LOC122319696_chrX_149409877_149420506 | 149416267 | AAATAGTG | A | upstream_gene_variant | MODIFIER | NA18995.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 313 | 0.0032 | -7 | c.-79 others(16): Show |
LOC122319696 | ENSG00000287585.2 | transcript | ENST00000653668.2 | protein_coding | 762 | chrX | TogoVar | ||||||
LOC122539214_chr19_52645447_52695496 | 52685897 | CAAAAAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp1 HG01070.hp1 others(15): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(10): Show | a0001c0001t0001g0210a0001c0001t0006g0098a0001c0001t0008g0057others(14): Show | 18 | 452 | 0.0398 | -7 | c.-20 others(24): Show |
LOC122539214 | ENSG00000269825.3 | transcript | ENST00000598322.3 | protein_coding | 1/3 | chr19 | TogoVar | ||||||
LOC127933115_chrX_23778278_23788367 | 23780462 | TAAAAAAA | T | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG01106.hp1 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 34 | 334 | 0.1018 | -7 | c.-28 others(18): Show |
LOC127933115 | ENSG00000288706.1 | transcript | ENST00000683890.1 | protein_coding | 2815 | chrX | TogoVar | ||||||
LOC127933115_chrX_23778278_23788367 | 23781874 | CAAAAAAA | C | upstream_gene_variant | MODIFIER | HG01928.hp1 NA18977.hp1 |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 2 | 334 | 0.0060 | -7 | c.-14 others(18): Show |
LOC127933115 | ENSG00000288706.1 | transcript | ENST00000683890.1 | protein_coding | 1403 | chrX | TogoVar | ||||||
LOC128092252_chr15_50643802_50691717 | 50650192 | CAAAAAAA | C | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00544.hp2 others(74): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0009a0001c0001t0000g0010a0001c0001t0000g0011others(71): Show | 77 | 388 | 0.1985 | -7 | c.307 others(24): Show |
LOC128092252 | ENSG00000288645.1 | transcript | ENST00000676296.1 | protein_coding | 3/3 | chr15 | TogoVar | ||||||
LOC128092252_chr15_50643802_50691717 | 50679504 | TATATATA | T | intron_variant | MODIFIER | HG01109.hp2 HG01257.hp2 HG01346.hp1 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0008a0001c0001t0000g0213a0001c0001t0000g0214others(18): Show | 22 | 388 | 0.0567 | -7 | c.187 others(24): Show |
LOC128092252 | ENSG00000288645.1 | transcript | ENST00000676296.1 | protein_coding | 1/3 | chr15 | TogoVar | ||||||
LOC128125816_chr12_122221430_122231564 | 122222586 | AAAAAATT | A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(124): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0000 | 127 | 372 | 0.3414 | -7 | c.*38 others(18): Show |
LOC128125816 | ENSG00000284934.3 | transcript | ENST00000713558.1 | protein_coding | 3843 | chr12 | TogoVar | ||||||
LOC128462377_chr16_89312046_89423292 | 89356719 | TGCAGTGA | T | intron_variant | MODIFIER | HG02109.hp1 HG02572.hp1 HG02809.hp2 |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0009a0001c0001t0000g0011a0001c0001t0000g0012 | 3 | 366 | 0.0082 | -7 | c.10- others(24): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | ||||||
LOC128462377_chr16_89312046_89423292 | 89366129 | CAAAAAAA | C | intron_variant | MODIFIER | HG00140.hp1 HG01070.hp1 HG01071.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0000 | a0001c0001t0000g0229a0001c0001t0000g0254a0001c0001t0000g0255others(12): Show | 15 | 366 | 0.0410 | -7 | c.10- others(24): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11369972 | ATGTGTGT | A | downstream_gene_variant | MODIFIER | HG01257.hp1 HG01346.hp2 HG02300.hp1 others(4): Show |
a0046a0058a0079others(4): Show | a0046c0098a0058c0120a0079c0079others(4): Show | a0046c0098t0003a0058c0120t0002a0079c0079t0004others(4): Show | a0046c0098t0003g0122a0058c0120t0002g0293a0079c0079t0004g0157others(4): Show | 7 | 310 | 0.0226 | -7 | c.*27 others(18): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 2042 | chr16 | TogoVar | ||||||
LOC400499_chr16_11367015_11532247 | 11443330 | CAAAAAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00609.hp1 others(53): Show |
a0003a0007a0008others(40): Show | a0003c0002a0007c0004a0008c0027others(42): Show | a0003c0002t0001a0007c0004t0001a0007c0004t0004others(46): Show | a0003c0002t0001g0136a0007c0004t0001g0137a0007c0004t0004g0066others(53): Show | 56 | 310 | 0.1807 | -7 | c.483 others(26): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 33/66 | chr16 | TogoVar |