regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LOC400499_chr16_11367015_11532247 | 11505445 | CTTTTTTT | C | intron_variant | MODIFIER | HG00408.hp2 HG00558.hp2 HG00673.hp1 others(10): Show |
a0001a0014a0019others(7): Show | a0001c0001a0014c0011a0019c0088others(7): Show | a0001c0001t0003a0014c0011t0001a0019c0088t0001others(7): Show | a0001c0001t0003g0201a0001c0001t0003g0202a0001c0001t0003g0247others(10): Show | 13 | 310 | 0.0419 | -7 | c.975 others(24): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 8/66 | chr16 | TogoVar | ||||||
LOC728392_chr17_5494427_5506006 | 5494594 | CAAAAAAA | C | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00735.hp1 HG00738.hp1 others(38): Show |
a0001a0002a0003others(1): Show | a0001c0002a0002c0003a0003c0004others(1): Show | a0001c0002t0002a0002c0003t0001a0003c0004t0004others(3): Show | a0001c0002t0002g0006a0001c0002t0002g0009a0002c0003t0001g0008others(4): Show | 41 | 430 | 0.0954 | -7 | c.*59 others(18): Show |
LOC728392 | ENSG00000286190.2 | transcript | ENST00000568641.2 | protein_coding | 4832 | chr17 | TogoVar | ||||||
LOC728743_chr7_150400676_150417470 | 150400705 | TTGCAGCC | T | upstream_gene_variant | MODIFIER | HG01243.hp2 HG01516.hp2 HG01517.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 3 | 432 | 0.0069 | -7 | c.-52 others(18): Show |
LOC728743 | ENSG00000284691.1 | transcript | ENST00000642087.2 | protein_coding | 4970 | chr7 | TogoVar | ||||||
LONRF1_chr8_12716906_12760526 | 12719425 | AGAGGGCG | A | downstream_gene_variant | MODIFIER | HG00642.hp1 HG00738.hp2 HG01175.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0046a0001c0001t0001g0246others(2): Show | 6 | 404 | 0.0149 | -7 | c.*36 others(18): Show |
LONRF1 | ENSG00000154359.13 | transcript | ENST00000398246.8 | protein_coding | 2480 | chr8 | TogoVar | ||||||
LONRF3_chrX_118969618_119023355 | 119000774 | ATTCTCTC | A | intron_variant | MODIFIER | NA18612.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0103 | 1 | 309 | 0.0032 | -7 | c.141 others(26): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
LONRF3_chrX_118969618_119023355 | 119010155 | CGCTTTCT | C | intron_variant | MODIFIER | HG02559.hp1 HG02922.hp1 |
a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0099a0001c0004t0001g0278 | 2 | 309 | 0.0065 | -7 | c.165 others(24): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 7/10 | chrX | TogoVar | ||||||
LOXL1_chr15_73921462_73957136 | 73928601 | CAAAAAAA | C | intron_variant | MODIFIER | HG01346.hp1 HG01433.hp1 HG02129.hp1 others(40): Show |
a0001a0002a0003others(3): Show | a0001c0004a0002c0001a0003c0003others(3): Show | a0001c0004t0001a0001c0004t0003a0002c0001t0001others(13): Show | a0001c0004t0001g0348a0001c0004t0003g0346a0001c0004t0003g0347others(34): Show | 43 | 448 | 0.0960 | -7 | c.110 others(24): Show |
LOXL1 | ENSG00000129038.16 | transcript | ENST00000261921.8 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
LOXL2_chr8_23291897_23409120 | 23390935 | GAAGGTGA | G | intron_variant | MODIFIER | HG02109.hp1 HG02109.hp2 HG02896.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0001 | a0001c0001t0001g0310a0001c0002t0001g0248a0001c0003t0001g0019others(1): Show | 4 | 348 | 0.0115 | -7 | c.-84 others(26): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 1/13 | chr8 | TogoVar | ||||||
LOXL4_chr10_98242690_98273194 | 98268800 | GCCCCCCC | G | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(88): Show |
a0001a0002a0003others(5): Show | a0001c0002a0001c0003a0001c0004others(8): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(13): Show | a0001c0002t0001g0037a0001c0002t0001g0097a0001c0002t0002g0036others(42): Show | 91 | 438 | 0.2078 | -7 | c.-70 others(16): Show |
LOXL4 | ENSG00000138131.4 | transcript | ENST00000260702.4 | protein_coding | 607 | chr10 | TogoVar | ||||||
LPAR5_chr12_6613835_6640959 | 6625793 | GTTTGTTT | G | intron_variant | MODIFIER | HG02109.hp1 HG02145.hp2 HG02622.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006a0001c0001t0007 | a0001c0001t0002g0225a0001c0001t0006g0024a0001c0001t0006g0025others(3): Show | 8 | 406 | 0.0197 | -7 | c.-21 others(26): Show |
LPAR5 | ENSG00000184574.10 | transcript | ENST00000329858.9 | protein_coding | 1/1 | chr12 | TogoVar | ||||||
LPAR5_chr12_6613835_6640959 | 6630433 | CTTTTTTT | C | intron_variant | MODIFIER | HG00099.hp1 HG01109.hp2 HG01515.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0149a0001c0001t0001g0159a0001c0001t0001g0182others(3): Show | 6 | 406 | 0.0148 | -7 | c.-21 others(26): Show |
LPAR5 | ENSG00000184574.10 | transcript | ENST00000329858.9 | protein_coding | 1/1 | chr12 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160653500 | ATAATGAG | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(113): Show |
a0001a0002a0003others(26): Show | a0001c0001a0001c0009a0001c0039others(43): Show | a0001c0001t0001a0001c0001t0002a0001c0009t0002others(46): Show | a0001c0001t0001g0048a0001c0001t0001g0049a0001c0001t0001g0050others(113): Show | 116 | 148 | 0.7838 | -7 | c.50- others(22): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 1/38 | chr6 | TogoVar | ||||||
LPA_chr6_160526482_160669275 | 160653967 | TATATATA | T | intron_variant | MODIFIER | NA19057.hp2 NA20905.hp2 |
a0002a0005 | a0002c0002a0005c0007 | a0002c0002t0003a0005c0007t0003 | a0002c0002t0003g0147a0005c0007t0003g0136 | 2 | 148 | 0.0135 | -7 | c.50- others(22): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 1/38 | chr6 | TogoVar | ||||||
LPCAT1_chr5_1456427_1528960 | 1464484 | ACAAACAT | A | intron_variant | MODIFIER | HG00280.hp1 HG01255.hp2 HG01256.hp2 others(8): Show |
a0001 | a0001c0002 | a0001c0002t0008a0001c0002t0023a0001c0002t0036 | a0001c0002t0008g0004a0001c0002t0008g0112a0001c0002t0008g0128others(7): Show | 11 | 386 | 0.0285 | -7 | c.142 others(24): Show |
LPCAT1 | ENSG00000153395.10 | transcript | ENST00000283415.4 | protein_coding | 13/13 | chr5 | TogoVar | ||||||
LPCAT1_chr5_1456427_1528960 | 1473035 | GCTCCTCT | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(36): Show |
a0001a0004 | a0001c0001a0001c0004a0001c0007others(2): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0026others(8): Show | a0001c0001t0002g0041a0001c0001t0002g0255a0001c0001t0002g0262others(34): Show | 39 | 386 | 0.1010 | -7 | c.117 others(24): Show |
LPCAT1 | ENSG00000153395.10 | transcript | ENST00000283415.4 | protein_coding | 11/13 | chr5 | TogoVar | ||||||
LPCAT1_chr5_1456427_1528960 | 1482132 | AGTGGGCT | A | intron_variant | MODIFIER | HG01099.hp2 HG01106.hp2 HG01261.hp1 others(28): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0004a0001c0002t0001a0001c0002t0015others(5): Show | a0001c0001t0004g0106a0001c0002t0001g0025a0001c0002t0001g0027others(28): Show | 31 | 386 | 0.0803 | -7 | c.727 others(24): Show |
LPCAT1 | ENSG00000153395.10 | transcript | ENST00000283415.4 | protein_coding | 6/13 | chr5 | TogoVar | ||||||
LPGAT1_chr1_211738457_211835763 | 211810716 | CACAGAAG | C | intron_variant | MODIFIER | HG01069.hp2 HG01361.hp1 HG01496.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0031 | a0001c0001t0013g0036a0001c0001t0013g0037a0001c0001t0013g0073others(1): Show | 4 | 332 | 0.0121 | -7 | c.239 others(26): Show |
LPGAT1 | ENSG00000123684.13 | transcript | ENST00000366997.9 | protein_coding | 2/7 | chr1 | TogoVar | ||||||
LPIN2_chr18_2911999_3018144 | 2944333 | CTTTTTTT | C | intron_variant | MODIFIER | HG00738.hp1 HG01192.hp2 HG02055.hp1 others(11): Show |
a0001 | a0001c0001a0001c0003a0001c0018 | a0001c0001t0002a0001c0001t0010a0001c0001t0015others(8): Show | a0001c0001t0002g0104a0001c0001t0002g0258a0001c0001t0010g0329others(11): Show | 14 | 380 | 0.0368 | -7 | c.591 others(24): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 4/19 | chr18 | TogoVar | ||||||
LPIN2_chr18_2911999_3018144 | 2958154 | AAAACAAC | A | intron_variant | MODIFIER | HG02486.hp1 HG02622.hp1 HG02647.hp1 others(7): Show |
a0001a0007 | a0001c0001a0007c0006 | a0001c0001t0002a0001c0001t0029a0001c0001t0040others(6): Show | a0001c0001t0002g0359a0001c0001t0029g0014a0001c0001t0040g0366others(7): Show | 10 | 380 | 0.0263 | -7 | c.192 others(24): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 2/19 | chr18 | TogoVar | ||||||
LPIN2_chr18_2911999_3018144 | 2996467 | CTTTTTTT | C | intron_variant | MODIFIER | HG00673.hp2 HG00735.hp2 HG01192.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0006a0001c0001t0017others(8): Show | a0001c0001t0002g0039a0001c0001t0006g0050a0001c0001t0017g0062others(8): Show | 11 | 380 | 0.0290 | -7 | c.-10 others(26): Show |
LPIN2 | ENSG00000101577.11 | transcript | ENST00000677752.1 | protein_coding | 1/19 | chr18 | TogoVar | ||||||
LPO_chr17_58233584_58273518 | 58241125 | CTTTTTTT | C | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp2 HG00597.hp1 others(26): Show |
a0001a0002a0005 | a0001c0001a0002c0003a0005c0009 | a0001c0001t0001a0002c0003t0001a0002c0003t0004others(1): Show | a0001c0001t0001g0080a0002c0003t0001g0013a0002c0003t0001g0015others(23): Show | 29 | 328 | 0.0884 | -7 | c.-2- others(22): Show |
LPO | ENSG00000167419.11 | transcript | ENST00000262290.9 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188203179 | TTTATATA | T | intron_variant | MODIFIER | HG02615.hp2 HG03098.hp2 |
a0002a0003 | a0002c0007a0003c0011 | a0002c0007t0007a0003c0011t0004 | a0002c0007t0007g0049a0003c0011t0004g0071 | 2 | 76 | 0.0263 | -7 | c.-18 others(28): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188232504 | ATTTTTTT | A | intron_variant | MODIFIER | HG01256.hp2 HG02074.hp2 HG02602.hp2 others(6): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0008a0001c0001t0017others(6): Show | a0001c0001t0001g0035a0001c0001t0008g0065a0001c0001t0017g0064others(6): Show | 9 | 76 | 0.1184 | -7 | c.-67 others(24): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188262692 | TCTCTCTC | T | intron_variant | MODIFIER | HG02109.hp2 HG02615.hp1 HG03453.hp2 |
a0002a0004a0006 | a0002c0008a0004c0010a0006c0013 | a0002c0008t0060a0004c0010t0038a0006c0013t0003 | a0002c0008t0060g0015a0004c0010t0038g0057a0006c0013t0003g0046 | 3 | 76 | 0.0395 | -7 | c.-67 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188318753 | CTTTTTTT | C | intron_variant | MODIFIER | HG00438.hp2 HG00639.hp2 HG00673.hp1 others(13): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0055others(12): Show | a0001c0001t0001g0056a0001c0001t0005g0024a0001c0001t0055g0012others(13): Show | 16 | 76 | 0.2105 | -7 | c.-66 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188358027 | GAATCTGA | G | intron_variant | MODIFIER | HG03195.hp1 NA19043.hp1 |
a0002a0004 | a0002c0015a0004c0017 | a0002c0015t0037a0004c0017t0044 | a0002c0015t0037g0051a0004c0017t0044g0043 | 2 | 76 | 0.0263 | -7 | c.-10 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188536002 | ATTTTTTT | A | intron_variant | MODIFIER | HG00438.hp1 HG00639.hp2 HG00673.hp2 others(25): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0018others(23): Show | a0001c0001t0001g0035a0001c0001t0001g0056a0001c0001t0005g0024others(25): Show | 28 | 76 | 0.3684 | -7 | c.429 others(26): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRATD2_chr8_126547443_126563478 | 126563378 | ATTTTTGT | A | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(64): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001a0001c0001t0002g0002a0001c0001t0003g0003others(6): Show | 67 | 434 | 0.1544 | -7 | c.-54 others(18): Show |
LRATD2 | ENSG00000168672.4 | transcript | ENST00000304916.4 | protein_coding | 4901 | chr8 | TogoVar | ||||||
LRAT_chr4_154739000_154758120 | 154745006 | CTTTTTTT | C | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG03490.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0006 | a0001c0001t0002g0009a0001c0001t0005g0009a0001c0001t0006g0009 | 7 | 398 | 0.0176 | -7 | c.540 others(22): Show |
LRAT | ENSG00000121207.12 | transcript | ENST00000336356.4 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
LRBA_chr4_150259435_151020284 | 150489458 | GAATATAA | G | intron_variant | MODIFIER | HG00621.hp2 HG01167.hp1 HG02486.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0019a0001c0032others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0019t0002others(5): Show | a0001c0001t0001g0088a0001c0001t0001g0091a0001c0001t0002g0174others(6): Show | 9 | 180 | 0.0500 | -7 | c.644 others(26): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 41/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150622688 | CTTTTTTT | C | intron_variant | MODIFIER | HG02055.hp1 HG02559.hp2 HG02622.hp1 others(12): Show |
a0001a0011a0023 | a0001c0001a0001c0013a0001c0037others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0051a0001c0001t0002g0170a0001c0001t0002g0174others(12): Show | 15 | 180 | 0.0833 | -7 | c.592 others(28): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150677821 | AGAAAAAG | A | intron_variant | MODIFIER | HG02809.hp2 HG02897.hp2 HG02922.hp1 others(1): Show |
a0002 | a0002c0002a0002c0022 | a0002c0002t0001a0002c0002t0003a0002c0022t0003 | a0002c0002t0001g0133a0002c0002t0003g0135a0002c0002t0003g0138others(1): Show | 4 | 180 | 0.0222 | -7 | c.592 others(26): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150776779 | CAGCCTGG | C | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG00597.hp1 others(61): Show |
a0001a0003a0007others(4): Show | a0001c0001a0001c0005a0001c0013others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0009others(61): Show | 64 | 180 | 0.3556 | -7 | c.558 others(28): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 34/56 | chr4 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 151008989 | ATATATAT | A | intron_variant | MODIFIER | HG01243.hp1 HG03579.hp1 |
a0001 | a0001c0007 | a0001c0007t0003 | a0001c0007t0003g0166a0001c0007t0003g0167 | 2 | 180 | 0.0111 | -7 | c.216 others(24): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 2/56 | chr4 | TogoVar | ||||||
LRCH1_chr13_46548170_46749898 | 46550009 | CAAAAAAA | C | upstream_gene_variant | MODIFIER | HG02258.hp2 HG02559.hp2 HG02895.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0021others(3): Show | a0001c0001t0001g0094a0001c0001t0003g0090a0001c0001t0021g0089others(6): Show | 9 | 274 | 0.0329 | -7 | c.-33 others(18): Show |
LRCH1 | ENSG00000136141.15 | transcript | ENST00000389797.8 | protein_coding | 3160 | chr13 | TogoVar | ||||||
LRCH1_chr13_46548170_46749898 | 46558572 | CAAAAAAA | C | intron_variant | MODIFIER | HG02258.hp2 HG02559.hp2 HG02895.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0021others(3): Show | a0001c0001t0001g0094a0001c0001t0003g0090a0001c0001t0021g0089others(6): Show | 9 | 274 | 0.0329 | -7 | c.307 others(24): Show |
LRCH1 | ENSG00000136141.15 | transcript | ENST00000389797.8 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
LRCH1_chr13_46548170_46749898 | 46673746 | ATTTTTTT | A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00423.hp1 others(102): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0012a0001c0001t0001g0013a0001c0001t0001g0014others(102): Show | 105 | 274 | 0.3832 | -7 | c.579 others(24): Show |
LRCH1 | ENSG00000136141.15 | transcript | ENST00000389797.8 | protein_coding | 3/19 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
LRCH1_chr13_46548170_46749898 | 46677255 | CAAAAAAA | C | intron_variant | MODIFIER | HG01243.hp2 HG03041.hp1 HG03225.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0025a0001c0003t0004others(2): Show | a0001c0001t0001g0240a0001c0001t0025g0226a0001c0003t0004g0257others(3): Show | 6 | 274 | 0.0219 | -7 | c.580 others(24): Show |
LRCH1 | ENSG00000136141.15 | transcript | ENST00000389797.8 | protein_coding | 3/19 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
LRCH1_chr13_46548170_46749898 | 46744425 | AGGAATTC | A | 3_prime_UTR_variant | MODIFIER | HG01074.hp2 HG01891.hp2 HG02451.hp1 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0006 | a0001c0001t0007a0001c0001t0025a0001c0002t0007others(2): Show | a0001c0001t0007g0173a0001c0001t0007g0201a0001c0001t0007g0202others(5): Show | 8 | 274 | 0.0292 | -7 | c.*25 others(18): Show |
LRCH1 | ENSG00000136141.15 | transcript | ENST00000389797.8 | protein_coding | 20/20 | 2578 | chr13 | TogoVar | |||||
LRCH2_chrX_115105616_115239096 | 115109232 | ATTTTTTT | A | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02257.hp1 HG02723.hp2 others(2): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0002a0001c0005t0002 | a0001c0001t0002g0040a0001c0001t0002g0157a0001c0001t0002g0159others(2): Show | 5 | 238 | 0.0210 | -7 | c.*39 others(18): Show |
LRCH2 | ENSG00000130224.15 | transcript | ENST00000317135.13 | protein_coding | 1383 | chrX | TogoVar | ||||||
LRCH3_chr3_197786254_197893436 | 197813510 | ATTTTTTT | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00408.hp2 others(110): Show |
a0001a0002a0008others(2): Show | a0001c0001a0001c0002a0001c0004others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(40): Show | a0001c0001t0001g0025a0001c0001t0001g0028a0001c0001t0001g0050others(110): Show | 113 | 292 | 0.3870 | -7 | c.263 others(24): Show |
LRCH3 | ENSG00000186001.14 | transcript | ENST00000425562.7 | protein_coding | 1/20 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRCH3_chr3_197786254_197893436 | 197860611 | CTTTTTAA | C | intron_variant | MODIFIER | HG00733.hp1 HG01074.hp2 HG01081.hp2 others(32): Show |
a0001a0004 | a0001c0001a0001c0004a0001c0007others(1): Show | a0001c0001t0002a0001c0001t0009a0001c0001t0040others(12): Show | a0001c0001t0002g0020a0001c0001t0002g0033a0001c0001t0002g0042others(32): Show | 35 | 292 | 0.1199 | -7 | c.171 others(26): Show |
LRCH3 | ENSG00000186001.14 | transcript | ENST00000425562.7 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRCH3_chr3_197786254_197893436 | 197882517 | CAAAACAA | C | intron_variant | MODIFIER | HG02717.hp2 HG02886.hp1 HG02970.hp2 others(3): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0001a0001c0002t0004a0001c0005t0048 | a0001c0002t0001g0035a0001c0002t0001g0081a0001c0002t0001g0162others(3): Show | 6 | 292 | 0.0206 | -7 | c.220 others(25): Show |
LRCH3 | ENSG00000186001.14 | transcript | ENST00000425562.7 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
LRFN2_chr6_40386591_40592364 | 40523505 | ATTTTTTT | A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(37): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0004others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(10): Show | a0001c0001t0001g0005a0001c0001t0001g0012a0001c0001t0001g0029others(37): Show | 40 | 228 | 0.1754 | -7 | c.-19 others(26): Show |
LRFN2 | ENSG00000156564.10 | transcript | ENST00000338305.7 | protein_coding | 1/2 | chr6 | TogoVar | ||||||
LRFN5_chr14_41601876_41909549 | 41610661 | TAAAAAAA | T | intron_variant | MODIFIER | HG00408.hp2 HG00558.hp2 HG00741.hp2 others(42): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0024a0001c0002t0003others(1): Show | a0001c0001t0003g0226a0001c0001t0003g0227a0001c0001t0003g0230others(42): Show | 45 | 280 | 0.1607 | -7 | c.-19 others(26): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LRFN5_chr14_41601876_41909549 | 41633151 | AATACAGC | A | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG02109.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0020a0001c0002t0004 | a0001c0001t0004g0033a0001c0001t0004g0034a0001c0001t0004g0035others(4): Show | 7 | 280 | 0.0250 | -7 | c.-19 others(28): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LRFN5_chr14_41601876_41909549 | 41675611 | AGGGAGAG | A | intron_variant | MODIFIER | HG01261.hp1 HG01891.hp2 HG02109.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0053a0001c0001t0001g0056a0001c0001t0002g0086others(11): Show | 14 | 280 | 0.0500 | -7 | c.-19 others(28): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LRFN5_chr14_41601876_41909549 | 41814768 | TAGACAAA | T | intron_variant | MODIFIER | HG01496.hp1 HG02109.hp1 HG02257.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(1): Show | a0001c0001t0001g0171a0001c0001t0001g0215a0001c0001t0001g0219others(7): Show | 10 | 280 | 0.0357 | -7 | c.-21 others(26): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 2/5 | chr14 | TogoVar | ||||||
LRFN5_chr14_41601876_41909549 | 41879916 | CTTTTTTT | C | intron_variant | MODIFIER | HG00408.hp2 NA18964.hp2 NA18995.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0003 | a0001c0002t0001g0054a0001c0002t0001g0055a0001c0002t0001g0146others(2): Show | 5 | 280 | 0.0179 | -7 | c.-20 others(24): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
LRFN5_chr14_41601876_41909549 | 41896297 | ATTGGATT | A | intron_variant | MODIFIER | HG02145.hp2 HG02896.hp2 NA18906.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0012a0001c0001t0013others(1): Show | a0001c0001t0011g0115a0001c0001t0012g0114a0001c0001t0013g0279others(1): Show | 4 | 280 | 0.0143 | -7 | c.209 others(26): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar |