view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PTPRD_chr9_8309246_10618002 | 10466623 | CAAAAAAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01243.hp1 NA19240.hp1 |
a0001a0005 | a0001c0004a0001c0014a0005c0016 | a0001c0004t0003a0001c0014t0025a0005c0016t0020 | a0001c0004t0003g0001 a0001c0014t0025g0033 a0005c0016t0020g0011 |
3 | 8 | 0.3750 | -7 | c.-59 others(30): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 2/45 | chr9 | TogoVar | |||||||
PTPRE_chr10_127902103_128090855 | 128002683 | CTTTTTTT | C | intron_variant | MODIFIER | HG00558.hp2 HG00735.hp1 HG01346.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0001g0227 a0001c0001t0001g0250 a0001c0001t0001g0257 others(9): Show |
12 | 38 | 0.3158 | -7 | c.-8+ others(24): Show |
PTPRE | ENSG00000132334.17 | transcript | ENST00000254667.8 | protein_coding | 2/20 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PTPRE_chr10_127902103_128090855 | 128087712 | CAAAAAAA | C | downstream_gene_variant | MODIFIER | HG00642.hp1 HG00738.hp1 HG01192.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0013a0001c0001t0028a0001c0002t0013others(2): Show | a0001c0001t0013g0046 a0001c0001t0013g0276 a0001c0001t0028g0140 others(5): Show |
8 | 89 | 0.0899 | -7 | c.*48 others(18): Show |
PTPRE | ENSG00000132334.17 | transcript | ENST00000254667.8 | protein_coding | 1858 | chr10 | TogoVar | |||||||
PTPRG_chr3_61556571_62302609 | 61647791 | CAAAAAAA | C | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp1 HG00639.hp2 others(14): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0018 others(14): Show |
17 | 52 | 0.3269 | -7 | c.85+ others(24): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61708443 | CTTTTTTT | C | intron_variant | MODIFIER | HG00280.hp2 HG02698.hp1 HG03669.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0002 | a0001c0001t0002g0047 a0002c0002t0002g0046 a0002c0002t0002g0051 others(1): Show |
4 | 51 | 0.0784 | -7 | c.86- others(24): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61746208 | ATTTTTTT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(27): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0001c0016others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0009 a0001c0001t0001g0030 a0001c0001t0001g0053 others(27): Show |
30 | 50 | 0.6000 | -7 | c.86- others(22): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61797581 | ACCCCCCC | A | intron_variant | MODIFIER | HG00735.hp2 HG01071.hp1 HG01255.hp1 others(22): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0008others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(10): Show | a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 others(22): Show |
25 | 81 | 0.3086 | -7 | c.190 others(26): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61842684 | CAAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00738.hp2 others(3): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0001c0001t0003a0002c0002t0002others(1): Show | a0001c0001t0001g0053 a0001c0001t0001g0085 a0001c0001t0003g0024 others(3): Show |
6 | 44 | 0.1364 | -7 | c.190 others(26): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61860434 | CTTTTTTT | C | intron_variant | MODIFIER | HG00735.hp1 HG00738.hp1 HG01071.hp1 others(21): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0005a0001c0008others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(15): Show | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0044 others(21): Show |
24 | 41 | 0.5854 | -7 | c.190 others(28): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 61942156 | TAAAAAAA | T | intron_variant | MODIFIER | HG02723.hp2 HG03130.hp1 HG03139.hp1 others(1): Show |
a0001a0004 | a0001c0001a0001c0016a0004c0006 | a0001c0001t0002a0001c0016t0001a0004c0006t0002 | a0001c0001t0002g0010 a0001c0001t0002g0093 a0001c0016t0001g0059 others(1): Show |
4 | 54 | 0.0741 | -7 | c.191 others(26): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 62073085 | AATCTGAT | A | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp1 HG00735.hp2 others(33): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0005a0001c0008others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(18): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0009 others(33): Show |
36 | 94 | 0.3830 | -7 | c.520 others(24): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 4/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 62110089 | CTTTTTTT | C | intron_variant | MODIFIER | HG00639.hp1 HG00738.hp1 HG01071.hp2 others(7): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0001c0014others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(5): Show | a0001c0001t0001g0042 a0001c0001t0002g0050 a0001c0001t0002g0088 others(7): Show |
10 | 35 | 0.2857 | -7 | c.616 others(26): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 5/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRG_chr3_61556571_62302609 | 62166197 | CTTTTTTT | C | intron_variant | MODIFIER | HG00738.hp2 HG01071.hp1 HG01255.hp2 others(6): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(5): Show | a0001c0001t0001g0003 a0001c0001t0002g0010 a0001c0001t0002g0062 others(6): Show |
9 | 20 | 0.4500 | -7 | c.841 others(24): Show |
PTPRG | ENSG00000144724.20 | transcript | ENST00000474889.6 | protein_coding | 7/29 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PTPRH_chr19_55176247_55214501 | 55176763 | TGGTTTAA | T | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(84): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0002c0005others(14): Show | a0001c0001t0001a0002c0002t0002a0002c0005t0002others(16): Show | a0001c0001t0001g0251 a0001c0001t0001g0255 a0001c0001t0001g0281 others(59): Show |
87 | 376 | 0.2314 | -7 | c.*49 others(18): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 4483 | chr19 | TogoVar | |||||||
PTPRH_chr19_55176247_55214501 | 55190593 | TTTATATA | T | intron_variant | MODIFIER | HG01074.hp2 HG01109.hp2 HG01261.hp2 others(10): Show |
a0002a0003a0004others(3): Show | a0002c0018a0002c0096a0003c0067others(4): Show | a0002c0018t0001a0002c0096t0001a0003c0067t0004others(4): Show | a0002c0018t0001g0105 a0002c0096t0001g0074 a0003c0067t0004g0130 others(9): Show |
13 | 376 | 0.0346 | -7 | c.238 others(24): Show |
PTPRH | ENSG00000080031.10 | transcript | ENST00000376350.8 | protein_coding | 12/19 | chr19 | TogoVar | |||||||
PTPRJ_chr11_47975559_48175839 | 48082410 | ATTTTTTT | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00438.hp2 others(20): Show |
a0001a0002 | a0001c0004a0001c0006a0002c0001 | a0001c0004t0004a0001c0004t0012a0001c0004t0014others(7): Show | a0001c0004t0004g0053 a0001c0004t0004g0055 a0001c0004t0004g0058 others(20): Show |
23 | 114 | 0.2018 | -7 | c.97- others(24): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTPRJ_chr11_47975559_48175839 | 48117540 | CAAAAAAA | C | intron_variant | MODIFIER | HG02451.hp2 HG02896.hp1 HG03098.hp1 others(2): Show |
a0005a0006 | a0005c0012a0006c0009 | a0005c0012t0022a0005c0012t0044a0006c0009t0002others(1): Show | a0005c0012t0022g0018 a0005c0012t0022g0041 a0005c0012t0044g0019 others(2): Show |
5 | 15 | 0.3333 | -7 | c.353 others(24): Show |
PTPRJ | ENSG00000149177.15 | transcript | ENST00000418331.7 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8057415 | TGTGATAC | T | intron_variant | MODIFIER | HG00639.hp2 HG02572.hp1 HG02723.hp1 others(1): Show |
a0001a0002 | a0001c0006a0002c0010a0002c0011 | a0001c0006t0002a0001c0006t0004a0002c0010t0001others(1): Show | a0001c0006t0002g0012 a0001c0006t0004g0070 a0002c0010t0001g0047 others(1): Show |
4 | 80 | 0.0500 | -7 | c.113 others(28): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 7/32 | chr18 | TogoVar | |||||||
PTPRM_chr18_7562316_8411856 | 8057425 | CTTTTTTT | C | intron_variant | MODIFIER | HG00741.hp1 HG01106.hp1 HG01515.hp2 others(6): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0045 a0001c0001t0002g0031 others(6): Show |
9 | 43 | 0.2093 | -7 | c.113 others(28): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 7/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8210037 | GCTCATGC | G | intron_variant | MODIFIER | HG00639.hp1 HG00741.hp2 HG01106.hp1 others(20): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(13): Show | a0001c0001t0001g0007 a0001c0001t0001g0045 a0001c0001t0002g0004 others(20): Show |
23 | 80 | 0.2875 | -7 | c.230 others(28): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 14/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRM_chr18_7562316_8411856 | 8249962 | TGTATTGA | T | intron_variant | MODIFIER | HG00673.hp1 HG00741.hp1 HG02451.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0005a0001c0002t0001a0001c0003t0002others(2): Show | a0001c0001t0005g0026 a0001c0002t0001g0002 a0001c0002t0001g0050 others(3): Show |
6 | 80 | 0.0750 | -7 | c.255 others(26): Show |
PTPRM | ENSG00000173482.17 | transcript | ENST00000580170.6 | protein_coding | 17/32 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
PTPRN_chr2_219284623_219314401 | 219296909 | AACCCCTT | A | intron_variant | MODIFIER | HG02451.hp1 HG02809.hp2 HG06807.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0002g0144 |
3 | 412 | 0.0073 | -7 | c.223 others(22): Show |
PTPRN | ENSG00000054356.14 | transcript | ENST00000295718.7 | protein_coding | 15/22 | chr2 | TogoVar | |||||||
PTPRO_chr12_15317508_15603331 | 15539761 | CAAAAAAA | C | intron_variant | MODIFIER | HG01884.hp2 HG02559.hp2 HG02630.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0003others(4): Show | a0001c0001t0001g0149 a0001c0001t0003g0030 a0001c0002t0003g0028 others(4): Show |
7 | 12 | 0.5833 | -7 | c.216 others(26): Show |
PTPRO | ENSG00000151490.15 | transcript | ENST00000281171.9 | protein_coding | 12/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
PTPRR_chr12_70633079_70925738 | 70665364 | CTTTTTTT | C | intron_variant | MODIFIER | HG01496.hp1 HG01884.hp1 HG01891.hp1 others(10): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0004c0005others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0002t0003others(2): Show | a0001c0001t0001g0017 a0001c0001t0001g0084 a0001c0001t0001g0090 others(10): Show |
13 | 28 | 0.4643 | -7 | c.149 others(26): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 10/13 | chr12 | TogoVar | |||||||
PTPRR_chr12_70633079_70925738 | 70666935 | GTTTTTTT | G | intron_variant | MODIFIER | HG00609.hp2 HG00621.hp1 HG00621.hp2 others(48): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0004a0002c0002others(7): Show | a0001c0001t0001a0001c0004t0001a0002c0002t0001others(9): Show | a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0029 others(47): Show |
51 | 73 | 0.6986 | -7 | c.149 others(26): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 10/13 | chr12 | TogoVar | |||||||
PTPRR_chr12_70633079_70925738 | 70731106 | GGAAGGAA | G | intron_variant | MODIFIER | HG01361.hp2 HG01884.hp2 HG02145.hp2 others(16): Show |
a0002a0003a0005others(1): Show | a0002c0002a0003c0003a0003c0012others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(4): Show | a0002c0002t0001g0021 a0002c0002t0001g0023 a0002c0002t0001g0040 others(16): Show |
19 | 202 | 0.0941 | -7 | c.100 others(28): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 6/13 | chr12 | TogoVar | |||||||
PTPRR_chr12_70633079_70925738 | 70733475 | AAAAAAAG | A | intron_variant | MODIFIER | HG01069.hp2 HG01361.hp2 HG01884.hp2 others(20): Show |
a0002a0003a0005others(1): Show | a0002c0002a0003c0003a0003c0012others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(4): Show | a0002c0002t0001g0021 a0002c0002t0001g0023 a0002c0002t0001g0040 others(20): Show |
23 | 202 | 0.1139 | -7 | c.100 others(28): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 6/13 | chr12 | TogoVar | |||||||
PTPRR_chr12_70633079_70925738 | 70843808 | ATTTTTTT | A | intron_variant | MODIFIER | HG01071.hp1 HG01071.hp2 HG01361.hp1 others(38): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0004a0002c0002others(8): Show | a0001c0001t0001a0001c0004t0001a0002c0002t0001others(10): Show | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0049 others(38): Show |
41 | 172 | 0.2384 | -7 | c.357 others(26): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 2/13 | chr12 | TogoVar | |||||||
PTPRR_chr12_70633079_70925738 | 70898485 | TTTACATA | T | intron_variant | MODIFIER | HG02630.hp2 HG02809.hp2 HG03130.hp2 |
a0002a0004a0008 | a0002c0021a0004c0022a0008c0009 | a0002c0021t0001a0004c0022t0001a0008c0009t0001 | a0002c0021t0001g0074 a0004c0022t0001g0056 a0008c0009t0001g0043 |
3 | 202 | 0.0149 | -7 | c.59- others(22): Show |
PTPRR | ENSG00000153233.13 | transcript | ENST00000283228.7 | protein_coding | 1/13 | chr12 | TogoVar | |||||||
PTPRS_chr19_5200508_5345812 | 5205064 | GAGTTTTT | G | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02055.hp1 HG02572.hp2 others(16): Show |
a0001 | a0001c0001a0001c0006a0001c0010others(8): Show | a0001c0001t0001a0001c0006t0005a0001c0006t0008others(10): Show | a0001c0001t0001g0117 a0001c0006t0005g0097 a0001c0006t0008g0040 others(16): Show |
19 | 274 | 0.0693 | -7 | c.*17 others(18): Show |
PTPRS | ENSG00000105426.19 | transcript | ENST00000262963.11 | protein_coding | 443 | chr19 | TogoVar | |||||||
PTPRS_chr19_5200508_5345812 | 5284412 | TAAATAAA | T | intron_variant | MODIFIER | HG00323.hp2 HG00639.hp2 HG00735.hp1 others(24): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0020others(8): Show | a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0086 others(24): Show |
27 | 274 | 0.0985 | -7 | c.91+ others(22): Show |
PTPRS | ENSG00000105426.19 | transcript | ENST00000262963.11 | protein_coding | 2/37 | chr19 | TogoVar | |||||||
PTPRS_chr19_5200508_5345812 | 5300325 | GTGGCTCA | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(84): Show |
a0001a0005a0007others(1): Show | a0001c0001a0001c0002a0001c0003others(26): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(39): Show | a0001c0001t0001g0006 a0001c0001t0001g0026 a0001c0001t0001g0033 others(84): Show |
87 | 274 | 0.3175 | -7 | c.-94 others(26): Show |
PTPRS | ENSG00000105426.19 | transcript | ENST00000262963.11 | protein_coding | 1/37 | chr19 | TogoVar | |||||||
PTPRS_chr19_5200508_5345812 | 5319413 | CTTTTTTT | C | intron_variant | MODIFIER | HG00280.hp2 HG00735.hp2 HG00738.hp1 others(17): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0002t0003a0001c0002t0012others(14): Show | a0001c0001t0001g0175 a0001c0002t0003g0146 a0001c0002t0012g0118 others(17): Show |
20 | 243 | 0.0823 | -7 | c.-95 others(26): Show |
PTPRS | ENSG00000105426.19 | transcript | ENST00000262963.11 | protein_coding | 1/37 | chr19 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42086726 | CAAAAAAA | C | intron_variant | MODIFIER | HG00741.hp1 HG01496.hp1 HG02155.hp1 others(4): Show |
a0001a0002a0005 | a0001c0002a0001c0003a0001c0018others(2): Show | a0001c0002t0003a0001c0003t0003a0001c0018t0003others(3): Show | a0001c0002t0003g0040 a0001c0003t0003g0033 a0001c0018t0003g0030 others(4): Show |
7 | 38 | 0.1842 | -7 | c.384 others(24): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 27/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42087872 | CAAAAAAA | C | intron_variant | MODIFIER | HG01109.hp2 HG01243.hp1 HG02109.hp1 others(9): Show |
a0001a0002a0003 | a0001c0002a0001c0003a0001c0007others(7): Show | a0001c0002t0006a0001c0003t0001a0001c0003t0020others(8): Show | a0001c0002t0006g0036 a0001c0002t0006g0039 a0001c0003t0001g0038 others(9): Show |
12 | 21 | 0.5714 | -7 | c.384 others(26): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 27/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42314930 | ATGCCAGT | A | intron_variant | MODIFIER | HG01243.hp2 HG01261.hp2 HG02280.hp1 others(9): Show |
a0001a0002a0003others(3): Show | a0001c0002a0001c0003a0001c0023others(7): Show | a0001c0002t0014a0001c0003t0001a0001c0003t0002others(9): Show | a0001c0002t0014g0052 a0001c0003t0001g0038 a0001c0003t0002g0043 others(9): Show |
12 | 62 | 0.1935 | -7 | c.213 others(24): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 12/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42409481 | CAAAAAAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00741.hp1 HG02622.hp2 others(2): Show |
a0001a0002a0004others(2): Show | a0001c0002a0002c0001a0004c0006others(2): Show | a0001c0002t0002a0002c0001t0002a0004c0006t0008others(2): Show | a0001c0002t0002g0058 a0002c0001t0002g0025 a0004c0006t0008g0054 others(2): Show |
5 | 9 | 0.5556 | -7 | c.156 others(28): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 9/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42508114 | GTAATTAC | G | intron_variant | MODIFIER | HG02647.hp2 HG03195.hp1 HG03471.hp2 |
a0001 | a0001c0003a0001c0007a0001c0022 | a0001c0003t0018a0001c0007t0004a0001c0022t0021 | a0001c0003t0018g0046 a0001c0007t0004g0062 a0001c0022t0021g0045 |
3 | 62 | 0.0484 | -7 | c.115 others(28): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42569076 | AAAAAAAT | A | intron_variant | MODIFIER | HG02809.hp1 HG02886.hp2 HG02896.hp1 others(2): Show |
a0001a0002 | a0001c0002a0001c0027a0002c0004others(1): Show | a0001c0002t0006a0001c0027t0028a0002c0004t0002others(1): Show | a0001c0002t0006g0036 a0001c0002t0006g0039 a0001c0027t0028g0049 others(2): Show |
5 | 59 | 0.0847 | -7 | c.115 others(28): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42654325 | GAAAACAA | G | intron_variant | MODIFIER | HG03471.hp2 HG03540.hp2 |
a0001a0002 | a0001c0022a0002c0009 | a0001c0022t0021a0002c0009t0001 | a0001c0022t0021g0045 a0002c0009t0001g0018 |
2 | 62 | 0.0323 | -7 | c.115 others(28): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 7/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 42694033 | TTATTTTC | T | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00738.hp2 others(14): Show |
a0001a0002a0004others(1): Show | a0001c0002a0001c0007a0001c0008others(8): Show | a0001c0002t0002a0001c0002t0003a0001c0007t0001others(13): Show | a0001c0002t0002g0058 a0001c0002t0003g0040 a0001c0007t0001g0061 others(14): Show |
17 | 62 | 0.2742 | -7 | c.860 others(26): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 6/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 43081387 | TTTTCACA | T | intron_variant | MODIFIER | HG01243.hp1 HG01257.hp2 HG01261.hp2 others(2): Show |
a0001a0002a0006others(1): Show | a0001c0003a0001c0008a0002c0001others(2): Show | a0001c0003t0020a0001c0008t0001a0002c0001t0025others(2): Show | a0001c0003t0020g0047 a0001c0008t0001g0060 a0002c0001t0025g0002 others(2): Show |
5 | 62 | 0.0806 | -7 | c.88+ others(26): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 1/30 | chr20 | TogoVar | |||||||
PTPRT_chr20_42067756_43194906 | 43087359 | CGTCCTTT | C | intron_variant | MODIFIER | HG00738.hp2 HG02809.hp1 HG02976.hp2 others(2): Show |
a0001a0002a0009 | a0001c0002a0001c0022a0001c0025others(2): Show | a0001c0002t0006a0001c0022t0021a0001c0025t0015others(2): Show | a0001c0002t0006g0039 a0001c0022t0021g0045 a0001c0025t0015g0028 others(2): Show |
5 | 28 | 0.1786 | -7 | c.88+ others(26): Show |
PTPRT | ENSG00000196090.14 | transcript | ENST00000373187.6 | protein_coding | 1/30 | chr20 | TogoVar | |||||||
PTPRU_chr1_29231522_29331800 | 29269239 | TATATATA | T | intron_variant | MODIFIER | HG01168.hp2 HG01261.hp1 HG02717.hp2 others(8): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0002others(3): Show | a0001c0001t0001a0001c0003t0001a0002c0002t0001others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0064 a0001c0001t0001g0065 others(7): Show |
11 | 294 | 0.0374 | -7 | c.114 others(26): Show |
PTPRU | ENSG00000060656.20 | transcript | ENST00000373779.8 | protein_coding | 7/29 | chr1 | TogoVar | |||||||
PTPRU_chr1_29231522_29331800 | 29269240 | ATATATAT | A | intron_variant | MODIFIER | HG00408.hp1 HG01496.hp1 HG02015.hp1 others(20): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002others(4): Show | a0001c0001t0001a0001c0003t0001a0002c0002t0001others(6): Show | a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0145 others(20): Show |
23 | 292 | 0.0788 | -7 | c.114 others(26): Show |
PTPRU | ENSG00000060656.20 | transcript | ENST00000373779.8 | protein_coding | 7/29 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PTPRU_chr1_29231522_29331800 | 29269242 | ATATATTT | A | intron_variant | MODIFIER | HG00408.hp2 HG00639.hp1 HG00673.hp1 others(29): Show |
a0001a0002a0013 | a0001c0001a0001c0003a0001c0005others(7): Show | a0001c0001t0001a0001c0003t0001a0001c0005t0001others(11): Show | a0001c0001t0001g0044 a0001c0003t0001g0008 a0001c0003t0001g0009 others(29): Show |
32 | 263 | 0.1217 | -7 | c.114 others(26): Show |
PTPRU | ENSG00000060656.20 | transcript | ENST00000373779.8 | protein_coding | 7/29 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PTPRU_chr1_29231522_29331800 | 29277803 | CTTTTTTT | C | intron_variant | MODIFIER | HG01123.hp1 HG01433.hp1 HG01516.hp1 others(3): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0002a0002c0004t0001others(1): Show | a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 others(3): Show |
6 | 11 | 0.5455 | -7 | c.145 others(26): Show |
PTPRU | ENSG00000060656.20 | transcript | ENST00000373779.8 | protein_coding | 8/29 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PTPRZ1_chr7_121868161_122067036 | 121906951 | ATATTATG | A | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00544.hp1 others(72): Show |
a0001a0003a0004others(3): Show | a0001c0001a0001c0030a0003c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0030t0002others(8): Show | a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0060 others(72): Show |
75 | 310 | 0.2419 | -7 | c.59- others(24): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 1/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTPRZ1_chr7_121868161_122067036 | 121934487 | CAAAAAAA | C | intron_variant | MODIFIER | HG00609.hp2 HG00621.hp1 HG02135.hp2 others(13): Show |
a0002a0004a0006 | a0002c0006a0004c0005a0006c0007 | a0002c0006t0001a0004c0005t0001a0006c0007t0001 | a0002c0006t0001g0077 a0004c0005t0001g0075 a0004c0005t0001g0078 others(13): Show |
16 | 104 | 0.1538 | -7 | c.124 others(24): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 2/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
PTPRZ1_chr7_121868161_122067036 | 122040776 | GTGTGTGT | G | intron_variant | MODIFIER | HG00621.hp1 HG01069.hp2 HG02135.hp2 others(1): Show |
a0002a0004a0006 | a0002c0002a0004c0005a0006c0007 | a0002c0002t0001a0004c0005t0001a0006c0007t0001 | a0002c0002t0001g0289 a0004c0005t0001g0262 a0006c0007t0001g0186 others(1): Show |
4 | 310 | 0.0129 | -7 | c.563 others(22): Show |
PTPRZ1 | ENSG00000106278.12 | transcript | ENST00000393386.7 | protein_coding | 20/29 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |