Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
CNTN4_chr3_2093866_3062959	2919353	GAAAAAAA GAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00639.hp1 others(53): Show HG00438.hp1 HG00438.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01261.hp1 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG01978.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp1 HG02523.hp1 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp2 HG02738.hp2 HG02818.hp1 HG02886.hp2 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp1 NA18906.hp1 NA18990.hp1 NA19043.hp1 NA19043.hp2	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0006 a0008	a0001c0001 a0001c0002 a0001c0003 others(15): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0010 a0001c0020 a0001c0021 a0001c0022 a0001c0023 a0001c0024 a0002c0015 a0002c0017 a0005c0026 a0006c0027 a0008c0028	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(29): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0010 a0001c0006t0002 a0001c0009t0014 a0001c0010t0003 a0001c0020t0002 a0001c0021t0002 a0001c0022t0003 a0001c0023t0004 a0001c0024t0015 a0002c0015t0003 a0002c0017t0008 a0005c0026t0017 a0006c0027t0001 a0008c0028t0001	a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0049 others(53): Show a0001c0001t0001g0012 a0001c0001t0001g0036 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0059 a0001c0001t0002g0032 a0001c0001t0002g0070 a0001c0001t0002g0086 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0008g0043 a0001c0001t0009g0052 a0001c0002t0001g0030 a0001c0002t0001g0033 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0003g0024 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0007g0080 a0001c0002t0007g0112 a0001c0003t0001g0014 a0001c0003t0001g0028 a0001c0003t0001g0045 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0002g0076 a0001c0003t0002g0077 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0074 a0001c0003t0011g0113 a0001c0004t0001g0021 a0001c0004t0001g0027 a0001c0004t0002g0017 a0001c0004t0002g0064 a0001c0004t0006g0044 a0001c0005t0001g0092 a0001c0005t0001g0096 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0006t0002g0060 a0001c0009t0014g0039 a0001c0010t0003g0073 a0001c0020t0002g0082 a0001c0021t0002g0025 a0001c0022t0003g0083 a0001c0023t0004g0041 a0001c0024t0015g0057 a0002c0015t0003g0103 a0002c0017t0008g0067 a0005c0026t0017g0046 a0006c0027t0001g0007 a0008c0028t0001g0023	56	105	0.5333	-7	c.120 others(26): Show c.1208-6258_1208-6252delAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	12/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2931356	GTTCCTAA GTTCCTAA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00735.hp2 HG01261.hp1 others(6): Show HG00639.hp2 HG00735.hp2 HG01261.hp1 HG02074.hp2 HG02965.hp1 HG03239.hp1 HG03927.hp1 HG03927.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0009	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0004t0002 a0001c0007t0016 a0001c0009t0014	a0001c0001t0001g0050 a0001c0001t0003g0095 a0001c0002t0002g0038 others(6): Show a0001c0001t0001g0050 a0001c0001t0003g0095 a0001c0002t0002g0038 a0001c0002t0007g0080 a0001c0003t0001g0028 a0001c0003t0002g0061 a0001c0004t0002g0064 a0001c0007t0016g0105 a0001c0009t0014g0039	9	116	0.0776	-7	c.135 others(26): Show c.1358+5579_1358+5585delTCCTAAT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2960389	TTTTTTTG TTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00738.hp2 HG01175.hp2 others(9): Show HG00639.hp2 HG00738.hp2 HG01175.hp2 HG02074.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02523.hp2 HG02738.hp1 HG03239.hp1 NA18990.hp1 NA18990.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0009 a0005c0026	a0001c0001t0005 a0001c0002t0001 a0001c0003t0001 others(7): Show a0001c0001t0005 a0001c0002t0001 a0001c0003t0001 a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0009t0004 a0005c0026t0017	a0001c0001t0005g0054 a0001c0002t0001g0029 a0001c0003t0001g0071 others(9): Show a0001c0001t0005g0054 a0001c0002t0001g0029 a0001c0003t0001g0071 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0001g0021 a0001c0004t0002g0064 a0001c0004t0002g0072 a0001c0009t0004g0005 a0005c0026t0017g0046	12	116	0.1034	-7	c.135 others(28): Show c.1359-27936_1359-27930delTGTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99210848	GGCAGATA GGCAGATA	G G	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp1 HG01081.hp2 others(14): Show HG00733.hp1 HG00738.hp1 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG02109.hp2 HG02257.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp1 NA19070.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0008 a0011	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0003c0011 a0006c0005 a0008c0012 a0011c0009	a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 others(9): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0002c0002t0003 a0002c0002t0004 a0003c0003t0007 a0003c0011t0019 a0006c0005t0001 a0008c0012t0008 a0011c0009t0005	a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 others(14): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0005g0012 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0014g0016 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0004g0039 a0003c0003t0007g0057 a0003c0011t0019g0059 a0006c0005t0001g0017 a0008c0012t0008g0026 a0011c0009t0005g0056	17	65	0.2615	-7	c.-20 others(30): Show c.-209-114493_-209-114487delATAGCAG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99342518	TGAGTCCA TGAGTCCA	T T	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02257.hp1 HG02976.hp2 others(1): Show HG01123.hp1 HG02257.hp1 HG02976.hp2 NA18522.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0003 a0003c0011 others(1): Show a0001c0001 a0003c0003 a0003c0011 a0006c0005	a0001c0001t0003 a0003c0003t0007 a0003c0011t0019 others(1): Show a0001c0001t0003 a0003c0003t0007 a0003c0011t0019 a0006c0005t0001	a0001c0001t0003g0060 a0003c0003t0007g0057 a0003c0011t0019g0059 others(1): Show a0001c0001t0003g0060 a0003c0003t0007g0057 a0003c0011t0019g0059 a0006c0005t0001g0017	4	66	0.0606	-7	c.-71 others(26): Show c.-71+17036_-71+17042delAGTCCAG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99433371	ATGTGTGT ATGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02132.hp2 HG02258.hp1 others(10): Show HG00735.hp2 HG02132.hp2 HG02258.hp1 HG02602.hp1 HG02723.hp1 HG02895.hp1 HG03041.hp2 HG06807.hp1 HG06807.hp2 NA18939.hp2 NA18957.hp2 NA19000.hp1 NA19070.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0007 a0010	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0006 a0005c0004 a0007c0010 a0010c0007	a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 others(9): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0002c0002t0005 a0003c0003t0002 a0004c0006t0013 a0004c0006t0014 a0005c0004t0002 a0007c0010t0011 a0010c0007t0023	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0006g0066 others(10): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0006g0066 a0001c0001t0010g0023 a0001c0001t0011g0062 a0001c0001t0014g0016 a0002c0002t0005g0013 a0003c0003t0002g0002 a0004c0006t0013g0025 a0004c0006t0014g0058 a0005c0004t0002g0051 a0007c0010t0011g0009 a0010c0007t0023g0046	13	33	0.3939	-7	c.-71 others(28): Show c.-71+107888_-71+107894delTGTGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	99515960	AACAAAAT AACAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02886.hp1 HG03471.hp2 others(1): Show HG01169.hp1 HG02886.hp1 HG03471.hp2 NA19000.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0003 a0005c0004 a0001c0001 a0003c0003 a0005c0004	a0001c0001t0004 a0001c0001t0009 a0003c0003t0002 others(1): Show a0001c0001t0004 a0001c0001t0009 a0003c0003t0002 a0005c0004t0002	a0001c0001t0004g0029 a0001c0001t0009g0043 a0003c0003t0002g0027 others(1): Show a0001c0001t0004g0029 a0001c0001t0009g0043 a0003c0003t0002g0027 a0005c0004t0002g0001	4	66	0.0606	-7	c.-70 others(26): Show c.-70-40184_-70-40178delACAAAAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	99543919	AAAAAAAC AAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp1 HG01243.hp2 others(18): Show HG00735.hp2 HG01081.hp1 HG01243.hp2 HG01496.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02723.hp2 HG02735.hp1 HG02895.hp1 HG02895.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp1 NA18522.hp2 NA18939.hp1 NA18957.hp1 NA19000.hp2 NA19070.hp1 NA20300.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0012	a0001c0001 a0002c0002 a0003c0003 others(6): Show a0001c0001 a0002c0002 a0003c0003 a0004c0006 a0005c0004 a0006c0005 a0007c0010 a0008c0012 a0012c0013	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(17): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0011 a0001c0001t0015 a0002c0002t0001 a0002c0002t0005 a0002c0002t0021 a0003c0003t0007 a0003c0003t0017 a0004c0006t0011 a0005c0004t0002 a0005c0004t0013 a0006c0005t0001 a0006c0005t0003 a0006c0005t0018 a0007c0010t0011 a0008c0012t0008 a0012c0013t0008	a0001c0001t0001g0052 a0001c0001t0004g0044 a0001c0001t0005g0012 others(18): Show a0001c0001t0001g0052 a0001c0001t0004g0044 a0001c0001t0005g0012 a0001c0001t0006g0032 a0001c0001t0011g0062 a0001c0001t0015g0064 a0002c0002t0001g0003 a0002c0002t0005g0013 a0002c0002t0021g0055 a0003c0003t0007g0057 a0003c0003t0017g0065 a0004c0006t0011g0033 a0005c0004t0002g0001 a0005c0004t0013g0050 a0006c0005t0001g0017 a0006c0005t0001g0035 a0006c0005t0003g0045 a0006c0005t0018g0028 a0007c0010t0011g0009 a0008c0012t0008g0026 a0012c0013t0008g0031	21	66	0.3182	-7	c.-70 others(26): Show c.-70-12219_-70-12213delCAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99573583	TAAAAATA TAAAAATA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp2 HG00735.hp1 others(53): Show HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02602.hp1 HG02602.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp2 HG02895.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03471.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18939.hp1 NA18957.hp1 NA18957.hp2 NA19000.hp1 NA19000.hp2 NA19043.hp1 NA19043.hp2 NA19070.hp1 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0011 a0012	a0001c0001 a0002c0002 a0003c0003 others(7): Show a0001c0001 a0002c0002 a0003c0003 a0003c0011 a0004c0006 a0005c0004 a0006c0005 a0007c0010 a0011c0009 a0012c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(32): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0008 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0003c0003t0017 a0003c0011t0019 a0004c0006t0001 a0004c0006t0009 a0004c0006t0011 a0004c0006t0014 a0005c0004t0002 a0005c0004t0020 a0006c0005t0001 a0006c0005t0003 a0006c0005t0010 a0006c0005t0018 a0007c0010t0011 a0011c0009t0005 a0012c0013t0008	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0020 others(53): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0004g0011 a0001c0001t0004g0029 a0001c0001t0004g0044 a0001c0001t0005g0012 a0001c0001t0005g0048 a0001c0001t0006g0032 a0001c0001t0006g0040 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0023 a0001c0001t0010g0047 a0001c0001t0011g0062 a0001c0001t0012g0018 a0001c0001t0015g0064 a0001c0001t0016g0049 a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0004g0039 a0002c0002t0005g0013 a0002c0002t0008g0019 a0002c0002t0021g0055 a0002c0002t0022g0010 a0003c0003t0002g0002 a0003c0003t0002g0014 a0003c0003t0002g0015 a0003c0003t0002g0061 a0003c0003t0007g0034 a0003c0003t0007g0057 a0003c0003t0017g0065 a0003c0011t0019g0059 a0004c0006t0001g0005 a0004c0006t0009g0042 a0004c0006t0011g0033 a0004c0006t0014g0058 a0005c0004t0002g0001 a0005c0004t0002g0041 a0005c0004t0020g0024 a0006c0005t0001g0017 a0006c0005t0001g0035 a0006c0005t0003g0045 a0006c0005t0010g0006 a0006c0005t0018g0028 a0007c0010t0011g0009 a0011c0009t0005g0056 a0012c0013t0008g0031	56	66	0.8485	-7	c.55+ others(24): Show c.55+17333_55+17339delATAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99592491	GGAGACAC GGAGACAC	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03041.hp1 HG03471.hp1 HG02886.hp1 HG03041.hp1 HG03471.hp1	a0003 a0008 a0009 a0003 a0008 a0009	a0003c0003 a0008c0012 a0009c0008 a0003c0003 a0008c0012 a0009c0008	a0003c0003t0002 a0008c0012t0008 a0009c0008t0007 a0003c0003t0002 a0008c0012t0008 a0009c0008t0007	a0003c0003t0002g0027 a0008c0012t0008g0026 a0009c0008t0007g0038 a0003c0003t0002g0027 a0008c0012t0008g0026 a0009c0008t0007g0038	3	66	0.0455	-7	c.55+ others(24): Show c.55+36223_55+36229delGAGACAC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	99615079	ATATATAT ATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG02109.hp2 others(6): Show HG00738.hp1 HG01099.hp2 HG02109.hp2 HG02132.hp2 HG02257.hp2 HG02735.hp1 HG02965.hp2 HG03130.hp1 NA19043.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0006	a0001c0001 a0002c0002 a0005c0004 others(1): Show a0001c0001 a0002c0002 a0005c0004 a0006c0005	a0001c0001t0003 a0001c0001t0006 a0001c0001t0015 others(4): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0015 a0002c0002t0003 a0002c0002t0008 a0005c0004t0002 a0006c0005t0001	a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0006g0032 others(6): Show a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0006g0032 a0001c0001t0015g0064 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0008g0019 a0005c0004t0002g0051 a0006c0005t0001g0035	9	66	0.1364	-7	c.55+ others(24): Show c.55+58817_55+58823delTTATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99637010	CAAAAAAA CAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp1 HG00735.hp2 others(15): Show HG00733.hp2 HG00735.hp1 HG00735.hp2 HG01099.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02109.hp1 HG03130.hp1 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA18939.hp1 NA19043.hp1 NA19070.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0011	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0004c0006 a0006c0005 a0011c0009	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(12): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0002c0002t0001 a0002c0002t0022 a0003c0003t0002 a0003c0003t0017 a0004c0006t0001 a0004c0006t0009 a0004c0006t0013 a0006c0005t0001 a0006c0005t0010 a0011c0009t0005	a0001c0001t0001g0020 a0001c0001t0004g0011 a0001c0001t0004g0029 others(15): Show a0001c0001t0001g0020 a0001c0001t0004g0011 a0001c0001t0004g0029 a0001c0001t0009g0043 a0001c0001t0011g0062 a0001c0001t0012g0018 a0001c0001t0012g0030 a0002c0002t0001g0003 a0002c0002t0022g0010 a0003c0003t0002g0014 a0003c0003t0002g0015 a0003c0003t0017g0065 a0004c0006t0001g0005 a0004c0006t0009g0042 a0004c0006t0013g0025 a0006c0005t0001g0035 a0006c0005t0010g0006 a0011c0009t0005g0056	18	19	0.9474	-7	c.55+ others(24): Show c.55+80766_55+80772delAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99769018	TTCTTTTC TTCTTTTC	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp1 HG00738.hp2 others(7): Show HG00733.hp2 HG00738.hp1 HG00738.hp2 HG01099.hp2 HG01496.hp1 HG02886.hp2 HG02895.hp2 HG03471.hp1 NA18522.hp1 NA19070.hp1	a0002 a0005 a0009 a0002 a0005 a0009	a0002c0002 a0005c0004 a0009c0008 a0002c0002 a0005c0004 a0009c0008	a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 others(6): Show a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0021 a0002c0002t0022 a0005c0004t0002 a0005c0004t0013 a0005c0004t0020 a0009c0008t0007	a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 others(7): Show a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0021g0055 a0002c0002t0022g0010 a0005c0004t0002g0041 a0005c0004t0013g0050 a0005c0004t0020g0024 a0009c0008t0007g0038	10	66	0.1515	-7	c.56- others(24): Show c.56-50517_56-50511delCTTTTCT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100091424	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01169.hp1 HG01496.hp1 others(7): Show HG00733.hp1 HG01169.hp1 HG01496.hp1 HG01496.hp2 HG01934.hp1 HG02602.hp1 HG02723.hp1 HG02735.hp1 NA18939.hp2 NA18957.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0010c0007	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(4): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0002c0002t0021 a0003c0003t0002 a0010c0007t0023	a0001c0001t0001g0008 a0001c0001t0006g0032 a0001c0001t0006g0066 others(7): Show a0001c0001t0001g0008 a0001c0001t0006g0032 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0012g0018 a0001c0001t0012g0030 a0002c0002t0021g0055 a0003c0003t0002g0002 a0010c0007t0023g0046	10	41	0.2439	-7	c.158 others(28): Show c.1580+17146_1580+17152delTTTTTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100113417	CAAAAAAA CAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG02109.hp1 others(3): Show HG00738.hp1 HG01099.hp2 HG02109.hp1 HG02257.hp1 HG02735.hp1 NA19043.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0011 others(1): Show a0001c0001 a0002c0002 a0003c0011 a0006c0005	a0001c0001t0006 a0002c0002t0003 a0002c0002t0008 others(2): Show a0001c0001t0006 a0002c0002t0003 a0002c0002t0008 a0003c0011t0019 a0006c0005t0010	a0001c0001t0006g0032 a0002c0002t0003g0036 a0002c0002t0003g0037 others(3): Show a0001c0001t0006g0032 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0008g0019 a0003c0011t0019g0059 a0006c0005t0010g0006	6	11	0.5455	-7	c.158 others(28): Show c.1580+39153_1580+39159delAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100238408	CAAAAAAA CAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01169.hp2 HG02004.hp2 others(4): Show HG00735.hp1 HG01169.hp2 HG02004.hp2 HG02258.hp1 HG02735.hp2 HG02965.hp1 NA19000.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0007	a0001c0001 a0003c0003 a0004c0006 others(1): Show a0001c0001 a0003c0003 a0004c0006 a0007c0010	a0001c0001t0001 a0003c0003t0002 a0004c0006t0001 others(4): Show a0001c0001t0001 a0003c0003t0002 a0004c0006t0001 a0004c0006t0009 a0004c0006t0011 a0004c0006t0014 a0007c0010t0011	a0001c0001t0001g0004 a0003c0003t0002g0061 a0004c0006t0001g0005 others(4): Show a0001c0001t0001g0004 a0003c0003t0002g0061 a0004c0006t0001g0005 a0004c0006t0009g0042 a0004c0006t0011g0033 a0004c0006t0014g0058 a0007c0010t0011g0009	7	42	0.1667	-7	c.200 others(28): Show c.2005+13612_2005+13618delAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	16/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100303565	CGCTTTAT CGCTTTAT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp1 HG01081.hp2 others(17): Show HG00733.hp1 HG00735.hp1 HG01081.hp2 HG01099.hp1 HG01123.hp1 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01496.hp1 HG02109.hp2 HG02132.hp1 HG02257.hp1 HG02602.hp1 HG02723.hp1 HG02735.hp1 HG02895.hp1 HG02965.hp2 HG03471.hp2 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0011 others(1): Show a0001c0001 a0002c0002 a0003c0011 a0004c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0002c0002t0004 a0002c0002t0005 a0002c0002t0021 a0003c0011t0019 a0004c0006t0001 a0004c0006t0009	a0001c0001t0001g0008 a0001c0001t0003g0021 a0001c0001t0003g0022 others(17): Show a0001c0001t0001g0008 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0004g0011 a0001c0001t0004g0029 a0001c0001t0005g0012 a0001c0001t0005g0048 a0001c0001t0006g0032 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0016g0049 a0002c0002t0004g0039 a0002c0002t0005g0013 a0002c0002t0021g0055 a0003c0011t0019g0059 a0004c0006t0001g0005 a0004c0006t0009g0042	20	66	0.3030	-7	c.262 others(26): Show c.2620+4170_2620+4176delGCTTTAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	20/24		chr11	TogoVar
CNTN5_chr11_99015949_100363885	100303566	GCTTTATC GCTTTATC	G G	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG00738.hp1 others(42): Show HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01081.hp1 HG01099.hp2 HG01123.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02602.hp2 HG02723.hp2 HG02735.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03471.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18939.hp1 NA18939.hp2 NA18957.hp1 NA18957.hp2 NA19000.hp1 NA19000.hp2 NA19043.hp1 NA19043.hp2 NA19070.hp1 NA19070.hp2 NA20300.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012	a0001c0001 a0002c0002 a0003c0003 others(9): Show a0001c0001 a0002c0002 a0003c0003 a0004c0006 a0005c0004 a0006c0005 a0007c0010 a0008c0012 a0009c0008 a0010c0007 a0011c0009 a0012c0013	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(28): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0008 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0003c0003t0017 a0004c0006t0011 a0004c0006t0013 a0004c0006t0014 a0005c0004t0002 a0005c0004t0013 a0005c0004t0020 a0006c0005t0001 a0006c0005t0003 a0006c0005t0010 a0006c0005t0018 a0007c0010t0011 a0008c0012t0008 a0009c0008t0007 a0010c0007t0023 a0011c0009t0005 a0012c0013t0008	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0052 others(42): Show a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0004g0044 a0001c0001t0006g0040 a0001c0001t0011g0062 a0001c0001t0012g0018 a0001c0001t0012g0030 a0001c0001t0014g0016 a0001c0001t0015g0064 a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0008g0019 a0002c0002t0022g0010 a0003c0003t0002g0002 a0003c0003t0002g0014 a0003c0003t0002g0015 a0003c0003t0002g0027 a0003c0003t0002g0061 a0003c0003t0007g0034 a0003c0003t0007g0057 a0003c0003t0017g0065 a0004c0006t0011g0033 a0004c0006t0013g0025 a0004c0006t0014g0058 a0005c0004t0002g0001 a0005c0004t0002g0041 a0005c0004t0002g0051 a0005c0004t0013g0050 a0005c0004t0020g0024 a0006c0005t0001g0017 a0006c0005t0001g0035 a0006c0005t0003g0045 a0006c0005t0010g0006 a0006c0005t0018g0028 a0007c0010t0011g0009 a0008c0012t0008g0026 a0009c0008t0007g0038 a0010c0007t0023g0046 a0011c0009t0005g0056 a0012c0013t0008g0031	45	66	0.6818	-7	c.262 others(26): Show c.2620+4189_2620+4195delATCCTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	20/24	INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1156704	CCTTCCTT CCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00609.hp1 others(26): Show HG00140.hp2 HG00423.hp1 HG00609.hp1 HG00639.hp1 HG00735.hp2 HG01074.hp1 HG01175.hp1 HG01255.hp2 HG01256.hp1 HG01261.hp2 HG01515.hp2 HG01517.hp1 HG02040.hp1 HG02074.hp2 HG02109.hp2 HG02451.hp2 HG02602.hp1 HG02622.hp1 HG02630.hp2 HG02738.hp1 HG03710.hp2 NA18949.hp2 NA18961.hp2 NA18980.hp2 NA19002.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0012 a0001c0020 a0002c0011	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0006t0001 a0001c0007t0001 a0001c0009t0003 a0001c0012t0001 a0001c0020t0001 a0002c0011t0001	a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0045 others(26): Show a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0045 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0096 a0001c0001t0001g0103 a0001c0001t0001g0152 a0001c0001t0001g0172 a0001c0001t0002g0044 a0001c0002t0001g0209 a0001c0003t0001g0011 a0001c0003t0001g0070 a0001c0003t0001g0086 a0001c0003t0001g0105 a0001c0003t0001g0115 a0001c0003t0001g0142 a0001c0003t0001g0173 a0001c0003t0001g0224 a0001c0003t0001g0225 a0001c0004t0001g0151 a0001c0006t0001g0216 a0001c0007t0001g0018 a0001c0007t0001g0135 a0001c0009t0003g0133 a0001c0012t0001g0078 a0001c0020t0001g0157 a0002c0011t0001g0217	29	230	0.1261	-7	c.55+ others(22): Show c.55+8646_55+8652delCTTCTTC	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	2/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245232	ATATACAC ATATACAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02451.hp1 HG03471.hp2 others(1): Show HG01884.hp2 HG02451.hp1 HG03471.hp2 HG06807.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0004 a0001c0005t0001 a0001c0005t0004	a0001c0005t0001g0188 a0001c0005t0001g0189 a0001c0005t0001g0193 others(1): Show a0001c0005t0001g0188 a0001c0005t0001g0189 a0001c0005t0001g0193 a0001c0005t0004g0194	4	227	0.0176	-7	c.358 others(26): Show c.358+17240_358+17246delTATACAC	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245273	ATACACAC ATACACAC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00741.hp1 HG01070.hp2 others(33): Show HG00639.hp2 HG00741.hp1 HG01070.hp2 HG01109.hp1 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01943.hp1 HG01978.hp1 HG02015.hp1 HG02155.hp2 HG02523.hp1 HG02602.hp2 HG02647.hp1 HG03139.hp2 HG03492.hp1 HG03669.hp1 HG03710.hp1 HG04115.hp2 NA18612.hp2 NA18949.hp2 NA18951.hp1 NA18953.hp2 NA18961.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18980.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19009.hp1 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0012	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(10): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0004t0005 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0002 a0001c0008t0001 a0001c0009t0001 a0001c0012t0001	a0001c0001t0001g0049 a0001c0002t0001g0046 a0001c0002t0001g0059 others(33): Show a0001c0001t0001g0049 a0001c0002t0001g0046 a0001c0002t0001g0059 a0001c0002t0001g0061 a0001c0002t0001g0068 a0001c0002t0001g0077 a0001c0002t0001g0117 a0001c0002t0001g0137 a0001c0002t0001g0153 a0001c0002t0001g0174 a0001c0002t0002g0017 a0001c0003t0001g0011 a0001c0003t0001g0074 a0001c0003t0001g0075 a0001c0003t0001g0173 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0004t0001g0026 a0001c0004t0001g0052 a0001c0004t0001g0058 a0001c0004t0001g0071 a0001c0004t0001g0085 a0001c0004t0001g0119 a0001c0004t0001g0146 a0001c0004t0005g0089 a0001c0005t0001g0038 a0001c0005t0001g0164 a0001c0006t0001g0090 a0001c0007t0001g0063 a0001c0007t0001g0066 a0001c0007t0001g0076 a0001c0007t0002g0122 a0001c0008t0001g0006 a0001c0008t0001g0067 a0001c0009t0001g0032 a0001c0012t0001g0121	36	196	0.1837	-7	c.358 others(26): Show c.358+17281_358+17287delTACACAC	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245288	TATATAAC TATATAAC	T T	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG03669.hp1 NA18522.hp2 HG02015.hp1 HG03669.hp1 NA18522.hp2	a0001 a0001	a0001c0003 a0001c0009 a0001c0019 a0001c0003 a0001c0009 a0001c0019	a0001c0003t0001 a0001c0009t0001 a0001c0019t0001 a0001c0003t0001 a0001c0009t0001 a0001c0019t0001	a0001c0003t0001g0074 a0001c0009t0001g0032 a0001c0019t0001g0202 a0001c0003t0001g0074 a0001c0009t0001g0032 a0001c0019t0001g0202	3	230	0.0130	-7	c.358 others(26): Show c.358+17301_358+17307delACATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1245312	ATATATAT ATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01123.hp1 HG01175.hp2 others(22): Show HG00741.hp1 HG01123.hp1 HG01175.hp2 HG01255.hp1 HG01943.hp1 HG01978.hp1 HG02155.hp2 HG02523.hp1 HG02647.hp1 HG03492.hp1 HG04115.hp2 NA18612.hp2 NA18949.hp2 NA18951.hp1 NA18953.hp2 NA18961.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18980.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19009.hp1 NA19065.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(4): Show a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0012	a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 others(6): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0004t0005 a0001c0005t0001 a0001c0007t0001 a0001c0008t0001 a0001c0012t0001	a0001c0002t0001g0046 a0001c0002t0001g0059 a0001c0002t0001g0061 others(22): Show a0001c0002t0001g0046 a0001c0002t0001g0059 a0001c0002t0001g0061 a0001c0002t0001g0068 a0001c0002t0001g0077 a0001c0002t0001g0117 a0001c0002t0001g0137 a0001c0002t0001g0174 a0001c0002t0002g0017 a0001c0003t0001g0011 a0001c0003t0001g0173 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0004t0001g0026 a0001c0004t0001g0052 a0001c0004t0001g0058 a0001c0004t0001g0071 a0001c0004t0001g0085 a0001c0004t0001g0119 a0001c0004t0005g0089 a0001c0005t0001g0164 a0001c0007t0001g0063 a0001c0007t0001g0066 a0001c0008t0001g0067 a0001c0012t0001g0121	25	230	0.1087	-7	c.358 others(26): Show c.358+17320_358+17326delTATATAT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		chr3	TogoVar
CNTN6_chr3_1088024_1409217	1255426	AAAGAAAG AAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01255.hp1 HG01256.hp2 others(34): Show HG00609.hp1 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG02056.hp1 HG02056.hp2 HG02132.hp1 HG02523.hp2 HG02647.hp2 HG02698.hp2 HG02965.hp1 HG02970.hp1 HG03239.hp1 HG03453.hp1 HG03654.hp2 HG03710.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp1 NA18612.hp1 NA18747.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18961.hp1 NA18969.hp1 NA18972.hp2 NA18979.hp2 NA19003.hp2 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA19065.hp2 NA19084.hp1 NA20905.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0002c0011 a0007c0018	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(8): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0004t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0006 a0001c0009t0001 a0001c0009t0003 a0002c0011t0001 a0007c0018t0001	a0001c0001t0001g0024 a0001c0001t0001g0034 a0001c0001t0001g0037 others(34): Show a0001c0001t0001g0024 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0072 a0001c0001t0001g0106 a0001c0001t0001g0116 a0001c0001t0001g0129 a0001c0001t0001g0141 a0001c0001t0001g0172 a0001c0002t0001g0028 a0001c0002t0001g0127 a0001c0002t0001g0176 a0001c0003t0001g0027 a0001c0003t0001g0035 a0001c0003t0001g0098 a0001c0003t0001g0113 a0001c0003t0001g0124 a0001c0003t0001g0165 a0001c0003t0001g0166 a0001c0003t0001g0168 a0001c0003t0001g0175 a0001c0003t0001g0226 a0001c0004t0001g0143 a0001c0006t0001g0036 a0001c0007t0001g0019 a0001c0007t0001g0020 a0001c0007t0001g0066 a0001c0007t0001g0092 a0001c0007t0001g0099 a0001c0007t0001g0100 a0001c0007t0006g0170 a0001c0009t0001g0155 a0001c0009t0003g0133 a0002c0011t0001g0217 a0007c0018t0001g0087	37	230	0.1609	-7	c.359 others(26): Show c.359-22984_359-22978delGAAAGAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1277346	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00741.hp2 others(11): Show HG00140.hp1 HG00140.hp2 HG00741.hp2 HG01071.hp1 HG01123.hp1 HG01515.hp1 HG02040.hp2 HG02056.hp2 HG02965.hp1 HG02970.hp1 HG03225.hp2 HG03453.hp1 HG03710.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0008 a0001c0003t0001 a0001c0004t0001 a0001c0007t0001	a0001c0001t0001g0045 a0001c0001t0001g0072 a0001c0002t0001g0046 others(11): Show a0001c0001t0001g0045 a0001c0001t0001g0072 a0001c0002t0001g0046 a0001c0002t0001g0048 a0001c0002t0002g0021 a0001c0002t0008g0221 a0001c0003t0001g0073 a0001c0003t0001g0075 a0001c0004t0001g0042 a0001c0007t0001g0018 a0001c0007t0001g0076 a0001c0007t0001g0092 a0001c0007t0001g0099 a0001c0007t0001g0100	14	15	0.9333	-7	c.359 others(24): Show c.359-1042_359-1036delTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1297638	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01952.hp2 HG02486.hp2 others(7): Show HG01884.hp2 HG01952.hp2 HG02486.hp2 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02922.hp2 HG02976.hp1 HG03139.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0005 a0001c0006 others(3): Show a0001c0002 a0001c0005 a0001c0006 a0002c0011 a0002c0014 a0002c0017	a0001c0002t0004 a0001c0005t0001 a0001c0006t0001 others(3): Show a0001c0002t0004 a0001c0005t0001 a0001c0006t0001 a0002c0011t0001 a0002c0014t0001 a0002c0017t0001	a0001c0002t0004g0228 a0001c0005t0001g0182 a0001c0005t0001g0188 others(7): Show a0001c0002t0004g0228 a0001c0005t0001g0182 a0001c0005t0001g0188 a0001c0005t0001g0196 a0001c0005t0001g0230 a0001c0006t0001g0183 a0002c0011t0001g0007 a0002c0014t0001g0220 a0002c0014t0001g0232 a0002c0017t0001g0179	10	155	0.0645	-7	c.659 others(22): Show c.659-242_659-236delTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	6/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300467	GGAAGGAA GGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG02055.hp1 others(8): Show HG01167.hp2 HG01169.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp2 HG02258.hp1 HG03130.hp2 HG03516.hp1 HG03579.hp1 NA18522.hp2 NA19043.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0005 a0001c0006 a0001c0007 others(6): Show a0001c0005 a0001c0006 a0001c0007 a0001c0013 a0001c0019 a0001c0021 a0001c0025 a0003c0015 a0005c0027	a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 others(6): Show a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0013t0001 a0001c0019t0001 a0001c0021t0001 a0001c0025t0001 a0003c0015t0001 a0005c0027t0001	a0001c0005t0001g0163 a0001c0006t0001g0200 a0001c0006t0001g0201 others(8): Show a0001c0005t0001g0163 a0001c0006t0001g0200 a0001c0006t0001g0201 a0001c0007t0001g0012 a0001c0013t0001g0199 a0001c0019t0001g0202 a0001c0021t0001g0231 a0001c0025t0001g0192 a0003c0015t0001g0008 a0003c0015t0001g0009 a0005c0027t0001g0191	11	230	0.0478	-7	c.761 others(24): Show c.761+2478_761+2484delAAGGAAG	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300500	AAAGAAAG AAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG02055.hp1 others(7): Show HG01167.hp2 HG01169.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp2 HG02258.hp1 HG03516.hp1 HG03579.hp1 NA18522.hp2 NA19043.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0005 a0001c0006 a0001c0007 others(5): Show a0001c0005 a0001c0006 a0001c0007 a0001c0013 a0001c0019 a0001c0021 a0003c0015 a0005c0027	a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 others(5): Show a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0013t0001 a0001c0019t0001 a0001c0021t0001 a0003c0015t0001 a0005c0027t0001	a0001c0005t0001g0163 a0001c0006t0001g0200 a0001c0006t0001g0201 others(7): Show a0001c0005t0001g0163 a0001c0006t0001g0200 a0001c0006t0001g0201 a0001c0007t0001g0012 a0001c0013t0001g0199 a0001c0019t0001g0202 a0001c0021t0001g0231 a0003c0015t0001g0008 a0003c0015t0001g0009 a0005c0027t0001g0191	10	229	0.0437	-7	c.761 others(24): Show c.761+2511_761+2517delAGAAAGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1300574	AAAGAAAG AAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00423.hp2 others(96): Show HG00140.hp1 HG00423.hp1 HG00423.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01943.hp2 HG01952.hp1 HG01978.hp1 HG01993.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02451.hp2 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02698.hp2 HG03239.hp1 HG03492.hp1 HG03492.hp2 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19009.hp1 NA19009.hp2 NA19065.hp1 NA19084.hp1 NA20129.hp1 NA20300.hp1 NA20905.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0004t0001 a0001c0004t0002 a0001c0004t0005 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0002 a0001c0007t0006 a0001c0008t0001 a0001c0009t0003 a0001c0010t0001 a0007c0018t0001	a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0030 others(96): Show a0001c0001t0001g0013 a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0037 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0138 a0001c0001t0001g0141 a0001c0001t0001g0152 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0204 a0001c0001t0002g0044 a0001c0002t0001g0028 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0051 a0001c0002t0001g0057 a0001c0002t0001g0061 a0001c0002t0001g0068 a0001c0002t0001g0077 a0001c0002t0001g0107 a0001c0002t0001g0117 a0001c0002t0001g0127 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0153 a0001c0002t0001g0174 a0001c0002t0001g0176 a0001c0002t0002g0017 a0001c0002t0007g0145 a0001c0003t0001g0011 a0001c0003t0001g0025 a0001c0003t0001g0027 a0001c0003t0001g0035 a0001c0003t0001g0062 a0001c0003t0001g0075 a0001c0003t0001g0086 a0001c0003t0001g0098 a0001c0003t0001g0108 a0001c0003t0001g0115 a0001c0003t0001g0124 a0001c0003t0001g0142 a0001c0003t0001g0144 a0001c0003t0001g0150 a0001c0003t0001g0166 a0001c0003t0001g0173 a0001c0003t0001g0175 a0001c0003t0001g0224 a0001c0003t0001g0225 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0004t0001g0026 a0001c0004t0001g0050 a0001c0004t0001g0052 a0001c0004t0001g0058 a0001c0004t0001g0071 a0001c0004t0001g0080 a0001c0004t0001g0085 a0001c0004t0001g0097 a0001c0004t0001g0110 a0001c0004t0001g0119 a0001c0004t0001g0134 a0001c0004t0001g0136 a0001c0004t0001g0139 a0001c0004t0001g0143 a0001c0004t0001g0147 a0001c0004t0001g0158 a0001c0004t0001g0159 a0001c0004t0002g0093 a0001c0004t0002g0101 a0001c0004t0005g0089 a0001c0005t0001g0038 a0001c0006t0001g0090 a0001c0007t0001g0019 a0001c0007t0001g0020 a0001c0007t0001g0063 a0001c0007t0001g0066 a0001c0007t0002g0122 a0001c0007t0006g0170 a0001c0008t0001g0123 a0001c0008t0001g0125 a0001c0009t0003g0133 a0001c0010t0001g0140 a0007c0018t0001g0087	99	226	0.4381	-7	c.761 others(24): Show c.761+2586_761+2592delGAAAGAA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22	INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP2_chr7_146111801_148425998	146486046	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02896.hp2 HG02897.hp2 others(2): Show HG02717.hp1 HG02896.hp2 HG02897.hp2 HG03225.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0001c0010 a0001c0018 others(1): Show a0001c0004 a0001c0010 a0001c0018 a0002c0017	a0001c0004t0003 a0001c0010t0002 a0001c0018t0002 others(1): Show a0001c0004t0003 a0001c0010t0002 a0001c0018t0002 a0002c0017t0015	a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0010t0002g0014 others(2): Show a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0010t0002g0014 a0001c0018t0002g0012 a0002c0017t0015g0037	5	8	0.6250	-7	c.98- others(26): Show c.98-288195_98-288189delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146495552	ATTTTTTT ATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02976.hp2 HG03540.hp1 HG02486.hp2 HG02976.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0010 a0001c0003t0011 a0001c0003t0020 a0001c0002t0010 a0001c0003t0011 a0001c0003t0020	a0001c0002t0010g0002 a0001c0003t0011g0023 a0001c0003t0020g0017 a0001c0002t0010g0002 a0001c0003t0011g0023 a0001c0003t0020g0017	3	13	0.2308	-7	c.98- others(26): Show c.98-278704_98-278698delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146622962	AAAAAAAG AAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG03139.hp2 HG03225.hp1 others(2): Show HG02897.hp1 HG03139.hp2 HG03225.hp1 NA18522.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0009 others(2): Show a0001c0002 a0001c0003 a0001c0009 a0001c0011 a0001c0013	a0001c0002t0001 a0001c0003t0023 a0001c0009t0019 others(2): Show a0001c0002t0001 a0001c0003t0023 a0001c0009t0019 a0001c0011t0016 a0001c0013t0003	a0001c0002t0001g0008 a0001c0003t0023g0030 a0001c0009t0019g0027 others(2): Show a0001c0002t0001g0008 a0001c0003t0023g0030 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0013t0003g0039	5	40	0.1250	-7	c.98- others(26): Show c.98-151288_98-151282delGAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146638476	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03540.hp1 HG03540.hp2 HG02922.hp2 HG03540.hp1 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 a0001c0002 a0001c0003 a0001c0004	a0001c0002t0010 a0001c0003t0004 a0001c0004t0005 a0001c0002t0010 a0001c0003t0004 a0001c0004t0005	a0001c0002t0010g0002 a0001c0003t0004g0029 a0001c0004t0005g0004 a0001c0002t0010g0002 a0001c0003t0004g0029 a0001c0004t0005g0004	3	28	0.1071	-7	c.98- others(26): Show c.98-135779_98-135773delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146655413	CAAAAAAA CAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02486.hp2 HG02630.hp1 others(2): Show HG01891.hp1 HG02486.hp2 HG02630.hp1 HG02717.hp2 HG02886.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0001c0005 a0001c0012 others(1): Show a0001c0003 a0001c0005 a0001c0012 a0003c0014	a0001c0003t0011 a0001c0005t0008 a0001c0005t0022 others(2): Show a0001c0003t0011 a0001c0005t0008 a0001c0005t0022 a0001c0012t0004 a0003c0014t0021	a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0005t0022g0032 others(2): Show a0001c0003t0011g0023 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0012t0004g0026 a0003c0014t0021g0022	5	14	0.3571	-7	c.98- others(26): Show c.98-118843_98-118837delAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146664157	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp2 HG02922.hp1 HG02451.hp2 HG02717.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0012 a0001c0005t0008 a0001c0001t0002 a0001c0001t0012 a0001c0005t0008	a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0005t0008g0005 a0001c0001t0002g0006 a0001c0001t0012g0034 a0001c0005t0008g0005	3	11	0.2727	-7	c.98- others(26): Show c.98-110096_98-110090delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146760409	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp2 HG02976.hp2 others(1): Show HG01891.hp2 HG02451.hp2 HG02976.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0003t0020	a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0006g0009 others(1): Show a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0006g0009 a0001c0003t0020g0017	4	7	0.5714	-7	c.98- others(24): Show c.98-13835_98-13829delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146872162	ATTTTTTT ATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03239.hp2 NA19030.hp1 NA20129.hp1 HG03239.hp2 NA19030.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0001 a0001c0002t0002 a0001c0006t0009 a0001c0001t0001 a0001c0002t0002 a0001c0006t0009	a0001c0001t0001g0038 a0001c0002t0002g0040 a0001c0006t0009g0028 a0001c0001t0001g0038 a0001c0002t0002g0040 a0001c0006t0009g0028	3	16	0.1875	-7	c.402 others(26): Show c.402+32276_402+32282delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147027011	AAAAAAAC AAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp2 HG02896.hp1 others(4): Show HG02451.hp1 HG02630.hp2 HG02896.hp1 HG02976.hp1 HG02976.hp2 HG03239.hp1 HG03540.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0002 a0001c0003 a0001c0015 others(2): Show a0001c0002 a0001c0003 a0001c0015 a0004c0020 a0005c0007	a0001c0002t0001 a0001c0002t0002 a0001c0003t0004 others(4): Show a0001c0002t0001 a0001c0002t0002 a0001c0003t0004 a0001c0003t0020 a0001c0015t0001 a0004c0020t0005 a0005c0007t0017	a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0003t0004g0029 others(4): Show a0001c0002t0001g0007 a0001c0002t0002g0013 a0001c0003t0004g0029 a0001c0003t0020g0017 a0001c0015t0001g0011 a0004c0020t0005g0016 a0005c0007t0017g0031	7	40	0.1750	-7	c.403 others(26): Show c.403-16889_403-16883delCAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147290683	CAAAAAAA CAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01891.hp1 HG02486.hp1 others(5): Show HG00735.hp2 HG01891.hp1 HG02486.hp1 HG02630.hp1 HG02976.hp2 HG03239.hp1 HG03540.hp2 NA19030.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0003 a0001c0012 others(4): Show a0001c0001 a0001c0003 a0001c0012 a0001c0019 a0002c0016 a0003c0014 a0005c0007	a0001c0001t0007 a0001c0003t0004 a0001c0003t0020 others(5): Show a0001c0001t0007 a0001c0003t0004 a0001c0003t0020 a0001c0012t0004 a0001c0019t0006 a0002c0016t0004 a0003c0014t0021 a0005c0007t0017	a0001c0001t0007g0020 a0001c0003t0004g0029 a0001c0003t0020g0017 others(5): Show a0001c0001t0007g0020 a0001c0003t0004g0029 a0001c0003t0020g0017 a0001c0012t0004g0026 a0001c0019t0006g0015 a0002c0016t0004g0024 a0003c0014t0021g0022 a0005c0007t0017g0031	8	26	0.3077	-7	c.134 others(26): Show c.1349-9442_1349-9436delAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	8/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147324535	CTTAAAGG CTTAAAGG	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02886.hp2 HG02896.hp2 others(3): Show HG01891.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03139.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 others(2): Show a0001c0001 a0001c0004 a0001c0005 a0001c0010 a0001c0011	a0001c0001t0006 a0001c0004t0003 a0001c0005t0022 others(2): Show a0001c0001t0006 a0001c0004t0003 a0001c0005t0022 a0001c0010t0002 a0001c0011t0016	a0001c0001t0006g0009 a0001c0004t0003g0035 a0001c0004t0003g0036 others(3): Show a0001c0001t0006g0009 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0005t0022g0032 a0001c0010t0002g0014 a0001c0011t0016g0019	6	40	0.1500	-7	c.149 others(28): Show c.1498+24252_1498+24258delGTTAAAG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147469526	TTTTTTTC TTTTTTTC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02886.hp2 HG02896.hp1 others(3): Show HG02717.hp2 HG02886.hp2 HG02896.hp1 HG03139.hp2 NA18522.hp2 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0001c0010 others(2): Show a0001c0001 a0001c0005 a0001c0010 a0001c0011 a0004c0020	a0001c0001t0007 a0001c0005t0008 a0001c0005t0022 others(3): Show a0001c0001t0007 a0001c0005t0008 a0001c0005t0022 a0001c0010t0002 a0001c0011t0016 a0004c0020t0005	a0001c0001t0007g0018 a0001c0005t0008g0005 a0001c0005t0022g0032 others(3): Show a0001c0001t0007g0018 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0010t0002g0014 a0001c0011t0016g0019 a0004c0020t0005g0016	6	40	0.1500	-7	c.167 others(28): Show c.1671-16407_1671-16401delTTTTTCT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147472204	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp2 HG02886.hp2 others(8): Show HG02451.hp2 HG02717.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02976.hp1 HG03139.hp2 HG03225.hp1 NA18522.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0009 a0001c0010 a0001c0011 a0001c0015	a0001c0001t0002 a0001c0001t0007 a0001c0002t0001 others(7): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0001 a0001c0004t0003 a0001c0005t0008 a0001c0005t0022 a0001c0009t0019 a0001c0010t0002 a0001c0011t0016 a0001c0015t0001	a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0002t0001g0008 others(8): Show a0001c0001t0002g0006 a0001c0001t0007g0018 a0001c0002t0001g0008 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0009t0019g0027 a0001c0010t0002g0014 a0001c0011t0016g0019 a0001c0015t0001g0011	11	13	0.8462	-7	c.167 others(28): Show c.1671-13711_1671-13705delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147474094	TAAAAATA TAAAAATA	T T	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03098.hp2 HG02922.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0012 a0001c0002t0001 a0001c0001t0012 a0001c0002t0001	a0001c0001t0012g0034 a0001c0002t0001g0021 a0001c0001t0012g0034 a0001c0002t0001g0021	2	40	0.0500	-7	c.167 others(28): Show c.1671-11824_1671-11818delAAATAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	10/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147601645	ATATATAT ATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG01891.hp2 others(10): Show HG00735.hp1 HG00735.hp2 HG01891.hp2 HG02451.hp2 HG02486.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp2 NA18522.hp2 NA20129.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0006 a0001c0011 a0001c0015 a0001c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0018 a0001c0003t0011 a0001c0003t0020 a0001c0004t0005 a0001c0006t0009 a0001c0006t0014 a0001c0011t0016 a0001c0015t0001 a0001c0019t0006	a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0006g0009 others(10): Show a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0018g0001 a0001c0003t0011g0023 a0001c0003t0020g0017 a0001c0004t0005g0004 a0001c0006t0009g0028 a0001c0006t0014g0033 a0001c0011t0016g0019 a0001c0015t0001g0011 a0001c0019t0006g0015	13	36	0.3611	-7	c.189 others(28): Show c.1898-37460_1898-37454delTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23		chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147627677	GCGAGACT GCGAGACT	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02717.hp2 HG02886.hp2 others(10): Show HG02451.hp1 HG02717.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03540.hp1 NA18522.hp1 NA19030.hp1 NA20129.hp2 NA21309.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0009 a0001c0011 a0001c0013 a0004c0020	a0001c0001t0001 a0001c0001t0018 a0001c0002t0001 others(10): Show a0001c0001t0001 a0001c0001t0018 a0001c0002t0001 a0001c0002t0010 a0001c0003t0023 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0013t0003 a0004c0020t0005	a0001c0001t0001g0038 a0001c0001t0018g0001 a0001c0002t0001g0007 others(10): Show a0001c0001t0001g0038 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0010g0002 a0001c0003t0023g0030 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0013t0003g0039 a0004c0020t0005g0016	13	40	0.3250	-7	c.189 others(28): Show c.1898-11427_1898-11421delGAGACTC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147630316	TAAAAAAA TAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02451.hp1 HG02896.hp1 others(7): Show HG00735.hp1 HG02451.hp1 HG02896.hp1 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03540.hp1 NA18522.hp1 NA21309.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0008 a0001c0009 a0001c0011 a0001c0013 a0004c0020	a0001c0001t0018 a0001c0002t0001 a0001c0002t0010 others(7): Show a0001c0001t0018 a0001c0002t0001 a0001c0002t0010 a0001c0004t0005 a0001c0006t0014 a0001c0008t0001 a0001c0009t0019 a0001c0011t0016 a0001c0013t0003 a0004c0020t0005	a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0010g0002 others(7): Show a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0010g0002 a0001c0004t0005g0004 a0001c0006t0014g0033 a0001c0008t0001g0025 a0001c0009t0019g0027 a0001c0011t0016g0019 a0001c0013t0003g0039 a0004c0020t0005g0016	10	20	0.5000	-7	c.189 others(26): Show c.1898-8773_1898-8767delAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147894958	TTTCTTTC TTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG03139.hp1 HG03225.hp2 others(1): Show HG02717.hp1 HG03139.hp1 HG03225.hp2 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0001c0018 a0002c0016 others(1): Show a0001c0008 a0001c0018 a0002c0016 a0002c0017	a0001c0008t0001 a0001c0018t0002 a0002c0016t0004 others(1): Show a0001c0008t0001 a0001c0018t0002 a0002c0016t0004 a0002c0017t0015	a0001c0008t0001g0025 a0001c0018t0002g0012 a0002c0016t0004g0024 others(1): Show a0001c0008t0001g0025 a0001c0018t0002g0012 a0002c0016t0004g0024 a0002c0017t0015g0037	4	39	0.1026	-7	c.209 others(26): Show c.2099-8604_2099-8598delCTTTCTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147899927	ATCCATTG ATCCATTG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG01891.hp2 others(11): Show HG00735.hp1 HG00735.hp2 HG01891.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG03098.hp2 HG03239.hp2 HG03540.hp2 NA18522.hp1 NA18522.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0013 a0001c0019	a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 others(9): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0004 a0001c0004t0003 a0001c0005t0022 a0001c0006t0014 a0001c0013t0003 a0001c0019t0006	a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0012g0034 others(11): Show a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0040 a0001c0003t0004g0029 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0005t0022g0032 a0001c0006t0014g0033 a0001c0013t0003g0039 a0001c0019t0006g0015	14	40	0.3500	-7	c.209 others(26): Show c.2099-3635_2099-3629delCATTGTC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148176211	CTTTTTTT CTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG03239.hp2 NA19030.hp1 others(1): Show HG00735.hp1 HG03239.hp2 NA19030.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006	a0001c0001t0001 a0001c0002t0002 a0001c0003t0023 others(1): Show a0001c0001t0001 a0001c0002t0002 a0001c0003t0023 a0001c0006t0014	a0001c0001t0001g0038 a0001c0002t0002g0040 a0001c0003t0023g0030 others(1): Show a0001c0001t0001g0038 a0001c0002t0002g0040 a0001c0003t0023g0030 a0001c0006t0014g0033	4	12	0.3333	-7	c.301 others(26): Show c.3010+3754_3010+3760delTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	18/23	INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148227929	GTGTGTGA GTGTGTGA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA19030.hp1 HG01891.hp1 NA19030.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0014 a0001c0001 a0003c0014	a0001c0001t0001 a0003c0014t0021 a0001c0001t0001 a0003c0014t0021	a0001c0001t0001g0038 a0003c0014t0021g0022 a0001c0001t0001g0038 a0003c0014t0021g0022	2	40	0.0500	-7	c.324 others(26): Show c.3248-1716_3248-1710delTGTGTGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	19/23		chr7	TogoVar

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