regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHRM3_chr1_239381568_239920450 | 239385936 | AGTGTGTG others(1): Show |
A | upstream_gene_variant | MODIFIER | HG02615.hp2 HG02922.hp1 HG02970.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0054a0001c0001t0002g0048a0001c0001t0004g0035others(6): Show | 9 | 116 | 0.0776 | -8 | c.-18 others(19): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 631 | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239404350 | GAGAAAGA others(1): Show |
G | intron_variant | MODIFIER | HG01261.hp1 HG01981.hp1 HG02738.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0008a0001c0001t0025others(2): Show | a0001c0001t0004g0016a0001c0001t0008g0067a0001c0001t0008g0072others(3): Show | 6 | 116 | 0.0517 | -8 | c.-52 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239496510 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00639.hp2 HG00738.hp1 HG01258.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0009a0001c0001t0001g0010a0001c0001t0001g0054others(13): Show | 16 | 116 | 0.1379 | -8 | c.-42 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239529628 | AAAACAAA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG01255.hp2 HG01346.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0052a0001c0001t0001g0105a0001c0001t0001g0109others(10): Show | 13 | 116 | 0.1121 | -8 | c.-42 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239531639 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00639.hp2 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0010a0001c0001t0001g0056a0001c0001t0001g0083others(19): Show | 22 | 116 | 0.1897 | -8 | c.-42 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239580258 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG01981.hp1 HG02735.hp2 HG02738.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0010a0001c0001t0018others(6): Show | a0001c0001t0005g0053a0001c0001t0010g0103a0001c0001t0018g0022others(6): Show | 9 | 116 | 0.0776 | -8 | c.-31 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239589638 | CTATATAT others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG01106.hp2 others(12): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(12): Show | a0001c0001t0001g0109a0001c0001t0003g0039a0001c0001t0009g0038others(12): Show | 15 | 116 | 0.1293 | -8 | c.-31 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239814049 | AATAAATA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG00738.hp2 others(39): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(27): Show | a0001c0001t0001g0002a0001c0001t0001g0013a0001c0001t0001g0052others(39): Show | 42 | 116 | 0.3621 | -8 | c.-14 others(29): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239874285 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG01261.hp1 HG02818.hp1 |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0060 | a0001c0001t0008g0072a0001c0001t0060g0001 | 2 | 116 | 0.0172 | -8 | c.-19 others(27): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 33983196 | GTGTGTAT others(1): Show |
G | intron_variant | MODIFIER | HG02027.hp2 HG02071.hp1 NA18747.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0256a0001c0001t0001g0257a0001c0001t0001g0258others(2): Show | 5 | 338 | 0.0148 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 33983198 | GTGTATAT others(1): Show |
G | intron_variant | MODIFIER | HG00558.hp2 HG00642.hp1 HG01168.hp1 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0141a0001c0001t0001g0180a0001c0001t0001g0181others(43): Show | 46 | 338 | 0.1361 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34008954 | GCACACAC others(1): Show |
G | intron_variant | MODIFIER | HG02258.hp2 HG02572.hp2 HG02622.hp1 others(1): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0003a0001c0001t0034a0004c0005t0019 | a0001c0001t0003g0051a0001c0001t0034g0280a0004c0005t0019g0293others(1): Show | 4 | 338 | 0.0118 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34014383 | AACAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG00558.hp2 HG00642.hp1 HG01168.hp1 others(29): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0025others(1): Show | a0001c0001t0001g0141a0001c0001t0001g0180a0001c0001t0001g0181others(29): Show | 32 | 338 | 0.0947 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34029517 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG01069.hp2 HG01106.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0010others(2): Show | a0001c0001t0001g0069a0001c0001t0004g0001a0001c0001t0004g0056others(16): Show | 20 | 338 | 0.0592 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34035792 | TAGTTAGT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(110): Show |
a0001a0005a0006 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0077a0001c0001t0001g0078a0001c0001t0001g0082others(109): Show | 113 | 338 | 0.3343 | -8 | c.-40 others(29): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA10_chr11_3660587_3676384 | 3674472 | CCCTGAAT others(1): Show |
C | upstream_gene_variant | MODIFIER | HG00741.hp2 HG01123.hp1 HG01123.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 5 | 450 | 0.0111 | -8 | c.-31 others(19): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 3089 | chr11 | TogoVar | ||||||
CHRNA1_chr2_174742592_174769472 | 174763326 | GCGCGCAC others(1): Show |
G | intron_variant | MODIFIER | HG02040.hp1 HG02132.hp2 NA18612.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0018a0001c0001t0001g0136 | 4 | 370 | 0.0108 | -8 | c.43+ others(23): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1/8 | chr2 | TogoVar | ||||||
CHRNA3_chr15_78590309_78625996 | 78621011 | CGCGGGCG others(1): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(161): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0004others(9): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(25): Show | a0001c0001t0001g0221a0001c0003t0001g0259a0001c0003t0001g0267others(127): Show | 164 | 410 | 0.4000 | -8 | c.-22 others(17): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 16 | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32174865 | ATTTTTTT others(1): Show |
A | downstream_gene_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01496.hp1 others(9): Show |
a0001 | a0001c0001a0001c0004a0001c0005others(1): Show | a0001c0001t0009a0001c0004t0008a0001c0004t0009others(3): Show | a0001c0001t0009g0203a0001c0004t0008g0194a0001c0004t0009g0078others(9): Show | 12 | 307 | 0.0391 | -8 | c.*64 others(19): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 1848 | chr15 | TogoVar | ||||||
CHRNB1_chr17_7440061_7462710 | 7446319 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG00673.hp2 HG01243.hp1 HG01261.hp1 others(9): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0203a0001c0001t0001g0205a0001c0001t0001g0206others(9): Show | 12 | 368 | 0.0326 | -8 | c.243 others(23): Show |
CHRNB1 | ENSG00000170175.11 | transcript | ENST00000306071.7 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
CHRNB2_chr1_154562778_154585013 | 154581771 | AAATCAAT others(1): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00544.hp1 others(117): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0010others(18): Show | a0001c0001t0002g0001a0001c0001t0002g0004a0001c0001t0002g0015others(31): Show | 120 | 424 | 0.2830 | -8 | c.*58 others(19): Show |
CHRNB2 | ENSG00000160716.6 | transcript | ENST00000368476.4 | protein_coding | 1759 | chr1 | TogoVar | ||||||
CHRNB3_chr8_42692366_42742407 | 42718672 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00408.hp1 others(105): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0006others(1): Show | a0001c0001t0002g0004a0001c0001t0002g0005a0001c0001t0002g0006others(102): Show | 108 | 282 | 0.3830 | -8 | c.249 others(25): Show |
CHRNB3 | ENSG00000147432.7 | transcript | ENST00000289957.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
CHRNB4_chr15_78619111_78646210 | 78621011 | CGCGGGCG others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(160): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0005a0001c0010others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(17): Show | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0010others(93): Show | 163 | 416 | 0.3918 | -8 | c.*41 others(19): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 3099 | chr15 | TogoVar | ||||||
CHRNB4_chr15_78619111_78646210 | 78626341 | GGTGTGTG others(1): Show |
G | intron_variant | MODIFIER | HG02083.hp2 HG02109.hp2 HG02559.hp2 others(17): Show |
a0001a0002a0004 | a0001c0001a0001c0006a0002c0002others(1): Show | a0001c0001t0002a0001c0001t0010a0001c0006t0002others(3): Show | a0001c0001t0002g0011a0001c0001t0002g0024a0001c0001t0002g0071others(11): Show | 20 | 416 | 0.0481 | -8 | c.133 others(27): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 5/5 | chr15 | TogoVar | ||||||
CHRNE_chr17_4892771_4908098 | 4897129 | CCCTTCTT others(1): Show |
C | downstream_gene_variant | MODIFIER | HG03098.hp1 NA18980.hp2 NA19089.hp1 others(1): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0002t0031a0001c0003t0004 | a0001c0002t0002g0003a0001c0002t0031g0042a0001c0003t0004g0005others(1): Show | 4 | 446 | 0.0090 | -8 | c.*15 others(19): Show |
CHRNE | ENSG00000108556.10 | transcript | ENST00000649488.2 | protein_coding | 641 | chr17 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104488695 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG00558.hp1 HG01167.hp2 HG01243.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0060a0001c0001t0001g0124a0001c0001t0002g0147others(13): Show | 16 | 240 | 0.0667 | -8 | c.118 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104541114 | CCTCTCTC others(1): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG00597.hp1 HG00597.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0033a0001c0001t0001g0060a0001c0001t0002g0022others(13): Show | 16 | 240 | 0.0667 | -8 | c.119 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104553568 | CGAGAGAG others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG01433.hp1 HG01517.hp1 others(19): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0019a0001c0001t0001g0020a0001c0001t0001g0042others(19): Show | 22 | 240 | 0.0917 | -8 | c.119 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104556209 | GGGCCCTG others(1): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG00558.hp2 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0018a0001c0001t0001g0118a0001c0001t0001g0234others(19): Show | 22 | 240 | 0.0917 | -8 | c.119 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104587756 | GATTTATT others(1): Show |
G | intron_variant | MODIFIER | HG02258.hp2 HG02970.hp1 NA18964.hp1 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0043a0001c0003t0001 | a0001c0001t0001g0020a0001c0001t0001g0211a0001c0001t0043g0187others(1): Show | 4 | 240 | 0.0167 | -8 | c.119 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104610043 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG01109.hp1 HG01109.hp2 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0007a0001c0001t0001g0020a0001c0001t0001g0034others(28): Show | 31 | 240 | 0.1292 | -8 | c.204 others(25): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104643636 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00544.hp2 HG00733.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0007a0001c0001t0001g0088a0001c0001t0002g0022others(10): Show | 13 | 240 | 0.0542 | -8 | c.204 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104684256 | GTGGATGG others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(96): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(40): Show | a0001c0001t0001g0019a0001c0001t0001g0023a0001c0001t0001g0034others(96): Show | 99 | 240 | 0.4125 | -8 | c.205 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104722155 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG02572.hp1 HG02896.hp1 HG02897.hp1 |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0028 | a0001c0001t0012g0175a0001c0001t0012g0188a0001c0001t0028g0080 | 3 | 240 | 0.0125 | -8 | c.205 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104744844 | CATTTATT others(1): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG02602.hp1 homoSapiens_chm13v2.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0019 | a0001c0001t0001g0023a0001c0001t0019g0006a0001c0001t0019g0157 | 3 | 240 | 0.0125 | -8 | c.205 others(27): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104752505 | CTTATTTA others(1): Show |
C | intron_variant | MODIFIER | HG00423.hp2 HG00597.hp2 HG01884.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0012a0001c0001t0016others(3): Show | a0001c0001t0009g0031a0001c0001t0009g0043a0001c0001t0009g0085others(9): Show | 12 | 240 | 0.0500 | -8 | c.205 others(25): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2432141 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00609.hp2 HG01070.hp1 HG01243.hp2 others(14): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0002 | a0001c0001t0301a0001c0001t0302a0001c0006t0285others(12): Show | a0001c0001t0301g0260a0001c0001t0302g0262a0001c0006t0285g0251others(14): Show | 17 | 344 | 0.0494 | -8 | c.-77 others(23): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2434104 | GCCCGCCC others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01891.hp2 HG02145.hp2 HG02257.hp2 others(13): Show |
a0001a0004a0007 | a0001c0001a0004c0004a0007c0008 | a0001c0001t0181a0001c0001t0182a0001c0001t0183others(13): Show | a0001c0001t0181g0273a0001c0001t0182g0163a0001c0001t0183g0162others(13): Show | 16 | 344 | 0.0465 | -8 | c.*22 others(17): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 2/2 | 228 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||
CHST12_chr7_2398611_2453484 | 2434579 | TAAAAAAA others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00544.hp2 HG00609.hp2 HG01243.hp1 others(16): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0010 | a0001c0001t0120a0001c0001t0121a0001c0001t0221others(12): Show | a0001c0001t0120g0179a0001c0001t0121g0193a0001c0001t0221g0108others(16): Show | 19 | 344 | 0.0552 | -8 | c.*72 others(17): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 2/2 | 725 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||
CHST13_chr3_126519155_126548291 | 126523553 | AACACACA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG02300.hp1 HG02451.hp1 HG02717.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027a0001c0001t0001g0071 | 4 | 364 | 0.0110 | -8 | c.-77 others(17): Show |
CHST13 | ENSG00000180767.11 | transcript | ENST00000319340.7 | protein_coding | 601 | chr3 | TogoVar | ||||||
CHST15_chr10_124002668_124098598 | 124045112 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG01243.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0157a0001c0001t0001g0181a0001c0001t0002g0024others(2): Show | 6 | 392 | 0.0153 | -8 | c.547 others(23): Show |
CHST15 | ENSG00000182022.18 | transcript | ENST00000435907.6 | protein_coding | 2/7 | chr10 | TogoVar | ||||||
CHST1_chr11_45642689_45670622 | 45646117 | TTGAATGA others(1): Show |
T | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00423.hp1 others(97): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0007a0001c0001t0011others(10): Show | a0001c0001t0002g0002a0001c0001t0002g0009a0001c0001t0002g0015others(30): Show | 100 | 386 | 0.2591 | -8 | c.*35 others(19): Show |
CHST1 | ENSG00000175264.8 | transcript | ENST00000308064.7 | protein_coding | 1571 | chr11 | TogoVar | ||||||
CHST8_chr19_33616953_33778506 | 33620395 | GACACACA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00621.hp2 HG01106.hp1 HG01168.hp1 others(7): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0004a0001c0001t0011a0004c0005t0004 | a0001c0001t0004g0001a0001c0001t0004g0002a0001c0001t0004g0003others(7): Show | 10 | 254 | 0.0394 | -8 | c.-20 others(19): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 1557 | chr19 | TogoVar | ||||||
CHST8_chr19_33616953_33778506 | 33633774 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG02630.hp2 HG02896.hp2 HG02897.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0003 | a0001c0001t0001g0037a0001c0001t0001g0142a0001c0001t0001g0157others(5): Show | 8 | 254 | 0.0315 | -8 | c.-16 others(29): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST8_chr19_33616953_33778506 | 33645127 | AGAAATTC others(1): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02559.hp1 HG02622.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0002t0001 | a0001c0001t0001g0246a0001c0001t0003g0247a0001c0002t0001g0176 | 3 | 254 | 0.0118 | -8 | c.-16 others(29): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST8_chr19_33616953_33778506 | 33694169 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00597.hp1 HG01175.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0018a0001c0001t0001g0079a0001c0001t0001g0089others(15): Show | 18 | 254 | 0.0709 | -8 | c.130 others(25): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST8_chr19_33616953_33778506 | 33722067 | AGATGGAT others(1): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG02145.hp1 HG02280.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0012a0001c0001t0001g0024a0001c0001t0001g0025others(16): Show | 19 | 254 | 0.0748 | -8 | c.130 others(27): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST9_chr18_26901481_27190308 | 26910323 | AACCTCAC others(1): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(228): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(81): Show | a0001c0001t0001g0008a0001c0001t0001g0037a0001c0001t0001g0038others(228): Show | 231 | 262 | 0.8817 | -8 | c.*59 others(19): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 6/6 | 5928 | chr18 | TogoVar | |||||
CHST9_chr18_26901481_27190308 | 26912372 | AATACACA others(1): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00609.hp1 HG00673.hp2 HG01109.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0001t0017a0001c0001t0025others(5): Show | a0001c0001t0007g0009a0001c0001t0007g0013a0001c0001t0007g0018others(18): Show | 21 | 262 | 0.0802 | -8 | c.*38 others(19): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 6/6 | 3879 | chr18 | TogoVar | |||||
CHST9_chr18_26901481_27190308 | 26928437 | AAGAGCAT others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00408.hp1 others(116): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(33): Show | a0001c0001t0001g0008a0001c0001t0001g0037a0001c0001t0001g0038others(116): Show | 119 | 262 | 0.4542 | -8 | c.241 others(27): Show |
CHST9 | ENSG00000154080.14 | transcript | ENST00000618847.5 | protein_coding | 5/5 | chr18 | TogoVar |