view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SSTR2_chr17_73160010_73181633 | 73162737 | GGAAAGAA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG01109.hp1 HG02015.hp2 HG02145.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0040others(1): Show | a0001c0001t0001g0005 a0001c0001t0001g0025 a0001c0001t0005g0056 others(2): Show |
10 | 454 | 0.0220 | -8 | c.-26 others(19): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 2272 | chr17 | TogoVar | |||||||
SSTR2_chr17_73160010_73181633 | 73164150 | GTGTGTGT others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00738.hp1 HG02145.hp1 HG02965.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0052a0001c0001t0117a0001c0001t0185 | a0001c0001t0052g0092 a0001c0001t0052g0094 a0001c0001t0117g0123 others(1): Show |
4 | 454 | 0.0088 | -8 | c.-12 others(19): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 859 | chr17 | TogoVar | |||||||
SSTR2_chr17_73160010_73181633 | 73171921 | CAAAAAAA others(1): Show |
C | 3_prime_UTR_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG01891.hp2 others(51): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0009a0001c0001t0022others(13): Show | a0001c0001t0002g0002 a0001c0001t0002g0029 a0001c0001t0002g0041 others(25): Show |
54 | 454 | 0.1189 | -8 | c.*15 others(19): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 2/2 | 1521 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SST_chr3_187663912_187675394 | 187669559 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG01074.hp2 HG01891.hp1 HG03139.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0024 |
6 | 420 | 0.0143 | -8 | c.139 others(23): Show |
SST | ENSG00000157005.4 | transcript | ENST00000287641.4 | protein_coding | 1/1 | chr3 | TogoVar | |||||||
SSU72_chr1_1536673_1579863 | 1546860 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00438.hp2 HG00621.hp1 others(37): Show |
a0001a0002 | a0001c0001a0002c0007 | a0001c0001t0001a0001c0001t0004a0002c0007t0004 | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(33): Show |
40 | 386 | 0.1036 | -8 | c.225 others(25): Show |
SSU72 | ENSG00000160075.12 | transcript | ENST00000291386.4 | protein_coding | 2/4 | chr1 | TogoVar | |||||||
SSU72_chr1_1536673_1579863 | 1574480 | GAGGATGT others(1): Show |
G | frameshift_variant | HIGH | HG01884.hp1 | a0003 | a0003c0003 | a0003c0003t0008 | a0003c0003t0008g0356 | 1 | 386 | 0.0026 | -8 | c.70_ others(13): Show |
p.Asn others(4): Show |
SSU72 | ENSG00000160075.12 | transcript | ENST00000291386.4 | protein_coding | 1/5 | 383/1284 | 70/585 | 24/194 | chr1 | TogoVar | |||
SSUH2_chr3_8614386_8649798 | 8637833 | CTTGTTTG others(1): Show |
C | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG00558.hp1 others(89): Show |
a0001a0002a0011 | a0001c0001a0001c0003a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0015 others(84): Show |
92 | 456 | 0.2018 | -8 | c.29- others(23): Show |
SSUH2 | ENSG00000125046.16 | transcript | ENST00000544814.7 | protein_coding | 1/11 | chr3 | TogoVar | |||||||
SSX2B_chrX_52746252_52766536 | 52757159 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG03831.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0025 | 1 | 55 | 0.0182 | -8 | c.331 others(23): Show |
SSX2B | ENSG00000268447.6 | transcript | ENST00000596480.6 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SSX2_chrX_52691896_52712178 | 52697047 | GGTGTGTG others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01243.hp1 | a0001 | a0001c0002 | a0001c0002t0017 | a0001c0002t0017g0015 | 1 | 98 | 0.0102 | -8 | c.*46 others(17): Show |
SSX2 | ENSG00000241476.9 | transcript | ENST00000337502.6 | protein_coding | 8/8 | 933 | chrX | TogoVar | ||||||
SSX3_chrX_48341427_48361703 | 48346579 | GTGTGTGT others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG02027.hp1 NA18963.hp1 NA19001.hp2 |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0016 | a0001c0001t0013g0039 a0001c0001t0013g0046 a0001c0001t0016g0092 |
3 | 331 | 0.0091 | -8 | c.*45 others(17): Show |
SSX3 | ENSG00000165584.16 | transcript | ENST00000298396.7 | protein_coding | 8/8 | 917 | chrX | TogoVar | ||||||
SSX3_chrX_48341427_48361703 | 48347670 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | NA18966.hp1 NA19070.hp1 NA19090.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0018 | 3 | 331 | 0.0091 | -8 | c.467 others(21): Show |
SSX3 | ENSG00000165584.16 | transcript | ENST00000298396.7 | protein_coding | 6/7 | chrX | TogoVar | |||||||
SSX3_chrX_48341427_48361703 | 48351330 | TGGGACTG others(1): Show |
T | intron_variant | MODIFIER | HG01168.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0052 | 1 | 331 | 0.0030 | -8 | c.330 others(23): Show |
SSX3 | ENSG00000165584.16 | transcript | ENST00000298396.7 | protein_coding | 5/7 | chrX | TogoVar | |||||||
SSX4B_chrX_48397082_48416960 | 48414250 | AGAAGGAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02647.hp1 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0010 a0001c0001t0003g0013 |
3 | 180 | 0.0167 | -8 | c.-24 others(19): Show |
SSX4B | ENSG00000269791.6 | transcript | ENST00000595235.6 | protein_coding | 2291 | chrX | TogoVar | |||||||
SSX4B_chrX_48397082_48416960 | 48414270 | GGAAGGAA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00621.hp1 HG02056.hp1 HG02922.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0002g0045 |
5 | 180 | 0.0278 | -8 | c.-24 others(19): Show |
SSX4B | ENSG00000269791.6 | transcript | ENST00000595235.6 | protein_coding | 2311 | chrX | TogoVar | |||||||
SSX4B_chrX_48397082_48416960 | 48414274 | GGAAAGAA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01167.hp1 HG01433.hp2 others(4): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0004 | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0058 others(3): Show |
7 | 180 | 0.0389 | -8 | c.-24 others(19): Show |
SSX4B | ENSG00000269791.6 | transcript | ENST00000595235.6 | protein_coding | 2315 | chrX | TogoVar | |||||||
SSX4B_chrX_48397082_48416960 | 48416846 | CTTTTTTT others(1): Show |
C | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01257.hp2 HG02300.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0084 |
3 | 180 | 0.0167 | -8 | c.-50 others(19): Show |
SSX4B | ENSG00000269791.6 | transcript | ENST00000595235.6 | protein_coding | 4887 | chrX | TogoVar | |||||||
SSX5_chrX_48181220_48201795 | 48186397 | TGTGTGTG others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG02056.hp1 HG02155.hp2 NA19091.hp1 |
a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0028 a0001c0001t0014g0046 |
3 | 326 | 0.0092 | -8 | c.*45 others(17): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 8/8 | 1226 | chrX | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48186399 | TGTGTGCG others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00544.hp2 HG01256.hp1 HG01261.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0008 a0001c0001t0005g0100 |
11 | 326 | 0.0337 | -8 | c.*45 others(17): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 8/8 | 1224 | chrX | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48198559 | GGAAAGAA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG00597.hp1 others(54): Show |
a0001a0002a0006 | a0001c0001a0002c0002a0006c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(27): Show |
57 | 326 | 0.1749 | -8 | c.-18 others(19): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 1765 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52655660 | TTTTATTT others(1): Show |
T | upstream_gene_variant | MODIFIER | HG01884.hp1 HG02486.hp1 HG02622.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0006 a0001c0001t0001g0016 a0001c0001t0001g0031 others(3): Show |
9 | 305 | 0.0295 | -8 | c.-92 others(17): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 761 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52656251 | AAAGGAAG others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00544.hp1 others(34): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0001c0001t0007a0004c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(13): Show |
37 | 305 | 0.1213 | -8 | c.-15 others(19): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 1352 | chrX | TogoVar | |||||||
ST14_chr11_130154782_130215362 | 130194852 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(166): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0010a0001c0012others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(158): Show |
169 | 292 | 0.5788 | -8 | c.111 others(25): Show |
ST14 | ENSG00000149418.11 | transcript | ENST00000278742.6 | protein_coding | 9/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST14_chr11_130154782_130215362 | 130208073 | CAATAAAT others(1): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01069.hp1 HG01106.hp2 others(27): Show |
a0001a0002a0005others(1): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0156 a0001c0001t0002g0004 a0001c0001t0002g0021 others(25): Show |
30 | 292 | 0.1027 | -8 | c.199 others(25): Show |
ST14 | ENSG00000149418.11 | transcript | ENST00000278742.6 | protein_coding | 16/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST18_chr8_52105838_52414756 | 52113954 | GTTTTTTT others(1): Show |
G | intron_variant | MODIFIER | HG01074.hp2 HG01243.hp1 HG01884.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0055 a0001c0001t0002g0020 a0001c0001t0005g0011 others(4): Show |
7 | 104 | 0.0673 | -8 | c.300 others(25): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 25/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52130115 | AAAGAAAA others(1): Show |
A | intron_variant | MODIFIER | HG00741.hp2 HG01981.hp1 HG02615.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0039 others(5): Show |
8 | 104 | 0.0769 | -8 | c.266 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 22/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52140547 | TGATAGAT others(1): Show |
T | intron_variant | MODIFIER | HG00609.hp1 HG00741.hp1 HG01981.hp2 others(15): Show |
a0001a0005a0006 | a0001c0001a0001c0002a0001c0010others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0019others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0042 others(15): Show |
18 | 104 | 0.1731 | -8 | c.216 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 17/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52170447 | AAAATCAA others(1): Show |
A | intron_variant | MODIFIER | HG02258.hp2 HG02280.hp2 HG02486.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0004 a0001c0001t0001g0042 a0001c0001t0001g0047 others(7): Show |
10 | 104 | 0.0962 | -8 | c.106 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 10/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52170452 | CAATAAAT others(1): Show |
C | intron_variant | MODIFIER | HG00609.hp1 HG01884.hp2 HG06807.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0002 | a0001c0001t0005g0011 a0001c0001t0005g0062 a0001c0002t0002g0059 |
3 | 104 | 0.0289 | -8 | c.106 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 10/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52208816 | AAAATAAA others(1): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG01978.hp1 HG02486.hp1 others(2): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0011t0001 | a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0087 others(2): Show |
5 | 104 | 0.0481 | -8 | c.86+ others(23): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 8/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52221085 | CTCTATCT others(1): Show |
C | intron_variant | MODIFIER | HG00558.hp2 HG00609.hp2 HG01074.hp1 others(33): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0012 others(33): Show |
36 | 104 | 0.3462 | -8 | c.-26 others(25): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 4/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52257829 | GGTGTCAT others(1): Show |
G | intron_variant | MODIFIER | HG01978.hp1 HG02486.hp1 HG03834.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0087 others(1): Show |
4 | 104 | 0.0385 | -8 | c.-46 others(29): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52268503 | CTATCTAT others(1): Show |
C | intron_variant | MODIFIER | HG02451.hp2 HG02572.hp2 HG02647.hp2 others(3): Show |
a0001a0005 | a0001c0001a0005c0007 | a0001c0001t0007a0001c0001t0010a0001c0001t0014others(2): Show | a0001c0001t0007g0008 a0001c0001t0010g0041 a0001c0001t0010g0067 others(3): Show |
6 | 104 | 0.0577 | -8 | c.-46 others(29): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52310388 | TTTTATTC others(1): Show |
T | intron_variant | MODIFIER | HG00558.hp2 HG00609.hp2 HG01243.hp2 others(43): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0011others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(43): Show |
46 | 104 | 0.4423 | -8 | c.-46 others(29): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52329219 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00558.hp2 HG01261.hp1 HG02083.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0073 a0001c0001t0002g0013 others(7): Show |
10 | 104 | 0.0962 | -8 | c.-46 others(29): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52357676 | AATATATA others(1): Show |
A | intron_variant | MODIFIER | HG01978.hp2 HG02572.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0064 a0001c0001t0003g0023 |
2 | 104 | 0.0192 | -8 | c.-46 others(29): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133531806 | TAAAAACA others(1): Show |
T | intron_variant | MODIFIER | HG02698.hp1 HG03017.hp2 HG03471.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0032a0001c0004t0003others(1): Show | a0001c0001t0001g0088 a0001c0001t0001g0129 a0001c0001t0001g0244 others(3): Show |
6 | 332 | 0.0181 | -8 | c.-42 others(29): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133541088 | TATATAAA others(1): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG02886.hp1 HG02896.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0031a0001c0004t0003 | a0001c0001t0001g0049 a0001c0001t0031g0001 a0001c0004t0003g0295 |
3 | 332 | 0.0090 | -8 | c.-42 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133551500 | GAGACAGA others(1): Show |
G | intron_variant | MODIFIER | HG01175.hp1 HG02055.hp2 HG02572.hp2 others(5): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0002t0010a0001c0002t0043others(4): Show | a0001c0001t0001g0055 a0001c0002t0010g0136 a0001c0002t0043g0146 others(5): Show |
8 | 332 | 0.0241 | -8 | c.-58 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133551541 | GGAAAGAA others(1): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(81): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0014a0001c0001t0016others(29): Show | a0001c0001t0001g0010 a0001c0001t0001g0026 a0001c0001t0001g0031 others(81): Show |
84 | 332 | 0.2530 | -8 | c.-58 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133562790 | TTTCTTTC others(1): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00621.hp1 others(17): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0003t0004others(7): Show | a0001c0001t0001g0148 a0001c0001t0001g0155 a0001c0001t0001g0278 others(17): Show |
20 | 332 | 0.0602 | -8 | c.-58 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133562794 | TTTCCTTC others(1): Show |
T | intron_variant | MODIFIER | HG00741.hp1 HG01109.hp2 HG01928.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(2): Show | a0001c0001t0001g0190 a0001c0001t0001g0219 a0001c0001t0001g0239 others(11): Show |
14 | 332 | 0.0422 | -8 | c.-58 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133576572 | ACAAAAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG01168.hp2 HG01169.hp1 HG02647.hp2 others(4): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0032a0001c0002t0052others(3): Show | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0032g0147 others(4): Show |
7 | 332 | 0.0211 | -8 | c.-54 others(19): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 4686 | chr8 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70405540 | TAAAAAAA others(1): Show |
T | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp1 HG00423.hp2 others(135): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(46): Show | a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 others(135): Show |
138 | 312 | 0.4423 | -8 | c.-10 others(29): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70408890 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00741.hp1 HG01346.hp2 HG02109.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(6): Show | a0001c0001t0001g0167 a0001c0001t0005g0177 a0001c0001t0007g0289 others(11): Show |
14 | 312 | 0.0449 | -8 | c.-10 others(29): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70413748 | TAATAAAT others(1): Show |
T | intron_variant | MODIFIER | HG01109.hp2 HG01361.hp2 HG01433.hp1 others(31): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(15): Show | a0001c0001t0001g0255 a0001c0001t0002g0051 a0001c0001t0004g0186 others(31): Show |
34 | 312 | 0.1090 | -8 | c.-10 others(31): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL3_chr1_43702536_43936159 | 43759063 | GCGCACAC others(1): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG00741.hp1 HG01070.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0002 a0001c0001t0002g0077 a0001c0001t0002g0088 others(10): Show |
13 | 274 | 0.0475 | -8 | c.118 others(27): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43765780 | TGTGTGCG others(1): Show |
T | intron_variant | MODIFIER | HG02895.hp2 HG02965.hp1 HG03225.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 others(1): Show |
4 | 274 | 0.0146 | -8 | c.119 others(27): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43771730 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG00621.hp1 HG01891.hp2 HG02109.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 others(7): Show |
10 | 274 | 0.0365 | -8 | c.119 others(27): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43829995 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00544.hp2 others(64): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0010 | a0001c0001t0001g0005 a0001c0001t0001g0064 a0001c0001t0001g0066 others(64): Show |
67 | 274 | 0.2445 | -8 | c.210 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43857578 | TCCTCCCT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01516.hp2 HG03710.hp2 others(1): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0002a0001c0001t0005a0004c0004t0002 | a0001c0001t0002g0085 a0001c0001t0002g0119 a0001c0001t0005g0006 others(1): Show |
4 | 274 | 0.0146 | -8 | c.302 others(27): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |