view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LMO2_chr11_33853576_33897076 | 33880271 | CACATGAT others(2): Show |
C | intron_variant | MODIFIER | HG00423.hp1 HG00597.hp2 HG01109.hp2 others(31): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0026others(3): Show | a0001c0001t0001g0221 a0001c0001t0001g0284 a0001c0001t0001g0285 others(23): Show |
34 | 442 | 0.0769 | -9 | c.-27 others(28): Show |
LMO2 | ENSG00000135363.12 | transcript | ENST00000257818.3 | protein_coding | 2/5 | chr11 | TogoVar | |||||||
LMO3_chr12_16543372_16611162 | 16578818 | AAACAACA others(2): Show |
A | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp1 HG00597.hp1 others(80): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0016 | a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0011 others(75): Show |
83 | 354 | 0.2345 | -9 | c.207 others(28): Show |
LMO3 | ENSG00000048540.16 | transcript | ENST00000537304.6 | protein_coding | 2/3 | chr12 | TogoVar | |||||||
LMO7_chr13_75631330_75864866 | 75732359 | CTTCATTT others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(114): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0019a0001c0020others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(35): Show | a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0116 others(114): Show |
117 | 272 | 0.4302 | -9 | c.210 others(26): Show |
LMO7 | ENSG00000136153.20 | transcript | ENST00000377534.8 | protein_coding | 3/30 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
LMOD2_chr7_123650866_123669290 | 123652716 | AAAAAAAA others(2): Show |
A | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(181): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0006others(5): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0007others(6): Show | a0001c0001t0002g0021 a0001c0001t0002g0053 a0001c0002t0001g0001 others(47): Show |
184 | 396 | 0.4647 | -9 | c.-32 others(20): Show |
LMOD2 | ENSG00000170807.12 | transcript | ENST00000458573.3 | protein_coding | 3149 | chr7 | TogoVar | |||||||
LMTK2_chr7_98101862_98214638 | 98163833 | TACAAAGG others(2): Show |
T | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00544.hp2 others(66): Show |
a0002a0004a0016others(1): Show | a0002c0002a0002c0006a0004c0004others(2): Show | a0002c0002t0003a0002c0002t0010a0002c0002t0013others(11): Show | a0002c0002t0003g0001 a0002c0002t0003g0010 a0002c0002t0003g0012 others(61): Show |
69 | 390 | 0.1769 | -9 | c.657 others(26): Show |
LMTK2 | ENSG00000164715.6 | transcript | ENST00000297293.6 | protein_coding | 6/13 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LMTK2_chr7_98101862_98214638 | 98211564 | TGGGGTTG others(2): Show |
T | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00544.hp2 HG00609.hp2 others(66): Show |
a0001a0002a0016others(1): Show | a0001c0013a0002c0002a0002c0006others(3): Show | a0001c0013t0019a0002c0002t0003a0002c0002t0010others(10): Show | a0001c0013t0019g0054 a0001c0013t0019g0055 a0002c0002t0003g0001 others(61): Show |
69 | 390 | 0.1769 | -9 | c.*60 others(20): Show |
LMTK2 | ENSG00000164715.6 | transcript | ENST00000297293.6 | protein_coding | 1927 | chr7 | TogoVar | |||||||
LMX1A_chr1_165196867_165361715 | 165221278 | CTGGAGGG others(2): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02145.hp1 HG02886.hp1 others(2): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0024 a0001c0002t0001g0073 a0001c0002t0001g0209 others(2): Show |
5 | 288 | 0.0174 | -9 | c.497 others(26): Show |
LMX1A | ENSG00000162761.14 | transcript | ENST00000342310.7 | protein_coding | 4/8 | chr1 | TogoVar | |||||||
LMX1A_chr1_165196867_165361715 | 165350173 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00597.hp1 HG01071.hp1 HG01346.hp1 others(30): Show |
a0001 | a0001c0001a0001c0002a0001c0008 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(9): Show | a0001c0001t0001g0057 a0001c0001t0001g0176 a0001c0001t0001g0177 others(30): Show |
33 | 288 | 0.1146 | -9 | c.263 others(26): Show |
LMX1A | ENSG00000162761.14 | transcript | ENST00000342310.7 | protein_coding | 3/8 | chr1 | TogoVar | |||||||
LMX1B_chr9_126608928_126706032 | 126611057 | GGGTGTGT others(2): Show |
G | upstream_gene_variant | MODIFIER | HG02615.hp1 HG03239.hp1 NA19054.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0149others(2): Show | a0001c0001t0002g0317 a0001c0001t0004g0271 a0001c0001t0149g0335 others(2): Show |
5 | 342 | 0.0146 | -9 | c.-33 others(20): Show |
LMX1B | ENSG00000136944.19 | transcript | ENST00000373474.9 | protein_coding | 2870 | chr9 | TogoVar | |||||||
LMX1B_chr9_126608928_126706032 | 126621652 | CTTCTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG01167.hp1 HG01169.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0026a0001c0001t0062a0001c0001t0069others(2): Show | a0001c0001t0026g0129 a0001c0001t0062g0124 a0001c0001t0069g0125 others(2): Show |
6 | 342 | 0.0175 | -9 | c.326 others(26): Show |
LMX1B | ENSG00000136944.19 | transcript | ENST00000373474.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
LMX1B_chr9_126608928_126706032 | 126697839 | GTTTTGTT others(2): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01358.hp1 HG01361.hp2 HG02717.hp2 others(2): Show |
a0001 | a0001c0002a0001c0008a0001c0014 | a0001c0002t0044a0001c0008t0033a0001c0014t0117 | a0001c0002t0044g0001 a0001c0002t0044g0041 a0001c0008t0033g0142 others(2): Show |
5 | 342 | 0.0146 | -9 | c.*13 others(20): Show |
LMX1B | ENSG00000136944.19 | transcript | ENST00000373474.9 | protein_coding | 8/8 | 1389 | chr9 | TogoVar | ||||||
LNPEP_chr5_96931080_97042513 | 96983967 | TTCTTAAT others(2): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02647.hp2 HG03130.hp2 |
a0001 | a0001c0001 | a0001c0001t0023 | a0001c0001t0023g0175 a0001c0001t0023g0176 a0001c0001t0023g0177 |
3 | 352 | 0.0085 | -9 | c.861 others(26): Show |
LNPEP | ENSG00000113441.16 | transcript | ENST00000231368.10 | protein_coding | 2/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
LNPEP_chr5_96931080_97042513 | 97008337 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(107): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0004others(3): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(23): Show | a0001c0001t0001g0197 a0001c0001t0001g0200 a0001c0001t0001g0206 others(105): Show |
110 | 352 | 0.3125 | -9 | c.203 others(28): Show |
LNPEP | ENSG00000113441.16 | transcript | ENST00000231368.10 | protein_coding | 11/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
LNX1_chr4_53454301_53596486 | 53456545 | ATTTTAGC others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00408.hp1 others(144): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0004a0001c0014others(7): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(13): Show | a0001c0001t0001g0005 a0001c0001t0001g0012 a0001c0001t0001g0013 others(142): Show |
147 | 356 | 0.4129 | -9 | c.*43 others(20): Show |
LNX1 | ENSG00000072201.14 | transcript | ENST00000263925.8 | protein_coding | 2755 | chr4 | TogoVar | |||||||
LNX1_chr4_53454301_53596486 | 53508342 | TTGATTTG others(2): Show |
T | intron_variant | MODIFIER | HG02132.hp2 NA18954.hp2 NA18974.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0015 | a0001c0001t0005g0169 a0001c0001t0005g0227 a0001c0001t0005g0234 others(8): Show |
11 | 356 | 0.0309 | -9 | c.381 others(24): Show |
LNX1 | ENSG00000072201.14 | transcript | ENST00000263925.8 | protein_coding | 2/10 | chr4 | TogoVar | |||||||
LNX1_chr4_53454301_53596486 | 53583932 | AAACAACA others(2): Show |
A | intron_variant | MODIFIER | HG02055.hp1 HG02647.hp2 HG02886.hp1 others(2): Show |
a0001a0005 | a0001c0001a0005c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0016others(1): Show | a0001c0001t0002g0017 a0001c0001t0004g0134 a0001c0001t0016g0016 others(2): Show |
5 | 356 | 0.0140 | -9 | c.-87 others(26): Show |
LNX1 | ENSG00000072201.14 | transcript | ENST00000263925.8 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
LNX2_chr13_27540913_27625529 | 27584310 | GGGAGGCT others(2): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00544.hp2 others(55): Show |
a0001a0005a0006 | a0001c0001a0005c0007a0006c0005 | a0001c0001t0003a0001c0001t0010a0001c0001t0016others(3): Show | a0001c0001t0003g0001 a0001c0001t0003g0193 a0001c0001t0003g0225 others(51): Show |
58 | 358 | 0.1620 | -9 | c.-10 others(28): Show |
LNX2 | ENSG00000139517.9 | transcript | ENST00000316334.5 | protein_coding | 1/9 | chr13 | TogoVar | |||||||
LNX2_chr13_27540913_27625529 | 27620496 | TCGCCGCC others(2): Show |
T | 5_prime_UTR_variant | MODIFIER | HG00735.hp2 HG01243.hp2 HG01884.hp1 others(6): Show |
a0002a0003 | a0002c0002a0003c0004 | a0002c0002t0007a0003c0004t0007 | a0002c0002t0007g0010 a0002c0002t0007g0012 a0002c0002t0007g0013 others(6): Show |
9 | 358 | 0.0251 | -9 | c.-23 others(18): Show |
LNX2 | ENSG00000139517.9 | transcript | ENST00000316334.5 | protein_coding | 1/10 | 38794 | chr13 | TogoVar | ||||||
LOC101059915_chrX_71662546_71676527 | 71673030 | GTTTTTTT others(2): Show |
G | downstream_gene_variant | MODIFIER | NA19030.hp1 | a0004 | a0004c0013 | a0004c0013t0001 | a0004c0013t0001g0019 | 1 | 340 | 0.0029 | -9 | c.*16 others(20): Show |
LOC101059915 | ENSG00000283599.3 | transcript | ENST00000636096.3 | protein_coding | 1504 | chrX | TogoVar | |||||||
LOC112267897_chr13_63741741_63753176 | 63746705 | TTACTGAC others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00558.hp2 HG01358.hp2 HG01884.hp1 others(12): Show |
a0005a0007a0011 | a0005c0005a0007c0007a0011c0017 | a0005c0005t0007a0007c0007t0001a0011c0017t0007 | a0005c0005t0007g0000 a0007c0007t0001g0000 a0011c0017t0007g0000 |
15 | 426 | 0.0352 | -9 | c.-95 others(16): Show |
LOC112267897 | ENSG00000237378.3 | transcript | ENST00000611641.1 | protein_coding | 35 | chr13 | TogoVar | |||||||
LOC127903862_chr6_16323342_16333431 | 16327633 | GTGCTGCT others(2): Show |
G | downstream_gene_variant | MODIFIER | NA18994.hp2 NA19063.hp2 NA19067.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 3 | 430 | 0.0070 | -9 | c.*70 others(18): Show |
LOC127903862 | ENSG00000288708.1 | transcript | ENST00000683730.1 | protein_coding | 708 | chr6 | TogoVar | |||||||
LOC127903862_chr6_16323342_16333431 | 16327678 | ATGCTGAT others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00544.hp1 others(98): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 101 | 430 | 0.2349 | -9 | c.*65 others(18): Show |
LOC127903862 | ENSG00000288708.1 | transcript | ENST00000683730.1 | protein_coding | 663 | chr6 | TogoVar | |||||||
LOC127933115_chrX_23778278_23788367 | 23781874 | CAAAAAAA others(2): Show |
C | upstream_gene_variant | MODIFIER | HG01516.hp2 HG02109.hp2 HG02683.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 15 | 334 | 0.0449 | -9 | c.-14 others(20): Show |
LOC127933115 | ENSG00000288706.1 | transcript | ENST00000683890.1 | protein_coding | 1403 | chrX | TogoVar | |||||||
LOC128092248_chr9_130708626_130718724 | 130716072 | CTTTTTTT others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00639.hp1 others(39): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 42 | 424 | 0.0991 | -9 | c.*23 others(20): Show |
LOC128092248 | ENSG00000288570.1 | transcript | ENST00000674075.1 | protein_coding | 2349 | chr9 | TogoVar | |||||||
LOC128092252_chr15_50643802_50691717 | 50650192 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02109.hp1 HG02280.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 a0001c0001t0001g0300 a0001c0001t0001g0301 others(6): Show |
9 | 388 | 0.0232 | -9 | c.307 others(26): Show |
LOC128092252 | ENSG00000288645.1 | transcript | ENST00000676296.1 | protein_coding | 3/3 | chr15 | TogoVar | |||||||
LOC128706665_chr20_10408708_10439222 | 10416315 | GATTATAG others(2): Show |
G | intron_variant | MODIFIER | HG00597.hp2 HG02027.hp1 NA18951.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0203 a0001c0001t0001g0217 a0001c0001t0001g0218 others(3): Show |
6 | 408 | 0.0147 | -9 | c.*19 others(26): Show |
LOC128706665 | ENSG00000285723.2 | transcript | ENST00000649912.2 | protein_coding | 2/2 | chr20 | TogoVar | |||||||
LOC128706666_chr20_10408708_10439222 | 10416315 | GATTATAG others(2): Show |
G | intron_variant | MODIFIER | HG00597.hp2 HG02027.hp1 NA18951.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0203 a0001c0001t0001g0217 a0001c0001t0001g0218 others(3): Show |
6 | 408 | 0.0147 | -9 | c.-44 others(26): Show |
LOC128706666 | ENSG00000285508.2 | transcript | ENST00000713549.1 | protein_coding | 2/2 | chr20 | TogoVar | |||||||
LOC647264_chr13_63827361_63838053 | 63832049 | AAATAATA others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00544.hp2 HG02809.hp2 NA18612.hp2 |
a0001a0003 | a0001c0001a0003c0009 | a0001c0001t0001a0003c0009t0005 | a0001c0001t0001g0000 a0003c0009t0005g0000 |
3 | 442 | 0.0068 | -9 | c.*60 others(18): Show |
LOC647264 | ENSG00000285566.2 | transcript | ENST00000648713.2 | protein_coding | 311 | chr13 | TogoVar | |||||||
LOC729966_chr19_18245034_18260362 | 18248822 | AGACCATC others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00544.hp1 HG00558.hp1 others(156): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0002c0005others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0005t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0024 others(28): Show |
159 | 454 | 0.3502 | -9 | c.*12 others(20): Show |
LOC729966 | ENSG00000284797.2 | transcript | ENST00000643046.2 | protein_coding | 1211 | chr19 | TogoVar | |||||||
LONP1_chr19_5686834_5725146 | 5716570 | GTTCCCAG others(2): Show |
G | intron_variant | MODIFIER | HG01243.hp2 HG01346.hp1 HG02027.hp2 others(4): Show |
a0001a0003a0012 | a0001c0034a0003c0003a0012c0014 | a0001c0034t0005a0003c0003t0001a0012c0014t0001 | a0001c0034t0005g0071 a0003c0003t0001g0341 a0003c0003t0001g0342 others(4): Show |
7 | 386 | 0.0181 | -9 | c.430 others(26): Show |
LONP1 | ENSG00000196365.12 | transcript | ENST00000360614.8 | protein_coding | 1/17 | chr19 | TogoVar | |||||||
LONP2_chr16_48239300_48362349 | 48265533 | AACTTTAT others(2): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00733.hp2 HG00738.hp2 others(37): Show |
a0001a0002a0003 | a0001c0001a0002c0005a0003c0007 | a0001c0001t0004a0001c0001t0005a0001c0001t0006others(24): Show | a0001c0001t0004g0004 a0001c0001t0004g0107 a0001c0001t0004g0110 others(36): Show |
40 | 154 | 0.2597 | -9 | c.982 others(26): Show |
LONP2 | ENSG00000102910.14 | transcript | ENST00000285737.9 | protein_coding | 6/14 | chr16 | TogoVar | |||||||
LONP2_chr16_48239300_48362349 | 48291182 | TTCTGTGG others(2): Show |
T | intron_variant | MODIFIER | HG01884.hp2 HG02145.hp2 HG02886.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0022a0001c0001t0023a0001c0001t0024others(2): Show | a0001c0001t0022g0117 a0001c0001t0023g0115 a0001c0001t0024g0118 others(2): Show |
5 | 154 | 0.0325 | -9 | c.138 others(28): Show |
LONP2 | ENSG00000102910.14 | transcript | ENST00000285737.9 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
LONRF3_chrX_118969618_119023355 | 118969844 | CTTTTTTT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(160): Show |
a0001a0003a0006 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(145): Show |
163 | 309 | 0.5275 | -9 | c.-49 others(20): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 4773 | chrX | TogoVar | |||||||
LONRF3_chrX_118969618_119023355 | 118986050 | AAACACAC others(2): Show |
A | intron_variant | MODIFIER | NA18994.hp1 NA19080.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0237 a0001c0001t0001g0261 |
2 | 309 | 0.0065 | -9 | c.105 others(28): Show |
LONRF3 | ENSG00000175556.17 | transcript | ENST00000371628.8 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
LOXHD1_chr18_46472273_46662220 | 46535581 | TTTGTTGT others(2): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG00558.hp2 others(19): Show |
a0005a0006a0010others(4): Show | a0005c0005a0005c0015a0006c0066others(7): Show | a0005c0005t0001a0005c0005t0002a0005c0015t0001others(8): Show | a0005c0005t0001g0086 a0005c0005t0001g0116 a0005c0005t0001g0125 others(19): Show |
22 | 270 | 0.0815 | -9 | c.409 others(28): Show |
LOXHD1 | ENSG00000167210.17 | transcript | ENST00000642948.1 | protein_coding | 26/40 | chr18 | TogoVar | |||||||
LOXL1_chr15_73921462_73957136 | 73928601 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00597.hp1 HG01175.hp2 HG02109.hp1 others(3): Show |
a0002a0003a0005 | a0002c0001a0003c0003a0005c0007 | a0002c0001t0002a0003c0003t0001a0003c0003t0003others(1): Show | a0002c0001t0002g0245 a0003c0003t0001g0240 a0003c0003t0001g0243 others(3): Show |
6 | 448 | 0.0134 | -9 | c.110 others(26): Show |
LOXL1 | ENSG00000129038.16 | transcript | ENST00000261921.8 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LOXL2_chr8_23291897_23409120 | 23354949 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00558.hp2 HG00597.hp1 HG00621.hp1 others(36): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(26): Show | a0001c0001t0001g0339 a0001c0001t0002g0335 a0001c0002t0001g0181 others(36): Show |
39 | 348 | 0.1121 | -9 | c.531 others(26): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 3/13 | chr8 | TogoVar | |||||||
LOXL2_chr8_23291897_23409120 | 23380187 | GATCGAGA others(2): Show |
G | intron_variant | MODIFIER | HG01261.hp1 HG02572.hp1 HG02615.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0010a0001c0013others(3): Show | a0001c0001t0003a0001c0010t0001a0001c0013t0001others(4): Show | a0001c0001t0003g0079 a0001c0010t0001g0042 a0001c0013t0001g0075 others(4): Show |
7 | 348 | 0.0201 | -9 | c.-83 others(28): Show |
LOXL2 | ENSG00000134013.16 | transcript | ENST00000389131.8 | protein_coding | 1/13 | chr8 | TogoVar | |||||||
LOXL4_chr10_98242690_98273194 | 98265371 | CTATTATT others(2): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00558.hp2 others(50): Show |
a0001a0002a0004others(6): Show | a0001c0003a0001c0004a0002c0001others(7): Show | a0001c0003t0001a0001c0003t0010a0001c0004t0001others(9): Show | a0001c0003t0001g0004 a0001c0003t0001g0017 a0001c0003t0001g0026 others(24): Show |
53 | 438 | 0.1210 | -9 | c.-32 others(26): Show |
LOXL4 | ENSG00000138131.4 | transcript | ENST00000260702.4 | protein_coding | 1/14 | chr10 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 110869221 | TATAAATC others(2): Show |
T | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(197): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(197): Show |
200 | 302 | 0.6623 | -9 | c.*61 others(20): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 4041 | chr9 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 110991579 | TTTGTTGT others(2): Show |
T | intron_variant | MODIFIER | HG02055.hp1 HG02451.hp2 HG02647.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0009a0001c0001t0012others(1): Show | a0001c0001t0004g0001 a0001c0001t0009g0166 a0001c0001t0009g0208 others(3): Show |
6 | 302 | 0.0199 | -9 | c.-18 others(30): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 2/5 | chr9 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 111005546 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG01070.hp1 HG01071.hp1 others(30): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 others(30): Show |
33 | 302 | 0.1093 | -9 | c.-18 others(30): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 2/5 | chr9 | TogoVar | |||||||
LPAR3_chr1_84806602_84898206 | 84817230 | CAACTAAG others(2): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00423.hp1 others(109): Show |
a0001a0004 | a0001c0001a0001c0008a0004c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(34): Show | a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0207 others(109): Show |
112 | 382 | 0.2932 | -9 | c.737 others(26): Show |
LPAR3 | ENSG00000171517.6 | transcript | ENST00000370611.4 | protein_coding | 2/2 | chr1 | TogoVar | |||||||
LPAR3_chr1_84806602_84898206 | 84829152 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG01175.hp1 HG01257.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0025a0001c0001t0062others(2): Show | a0001c0001t0014g0366 a0001c0001t0025g0182 a0001c0001t0025g0262 others(4): Show |
7 | 382 | 0.0183 | -9 | c.737 others(28): Show |
LPAR3 | ENSG00000171517.6 | transcript | ENST00000370611.4 | protein_coding | 2/2 | chr1 | TogoVar | |||||||
LPAR5_chr12_6613835_6640959 | 6630433 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(151): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(76): Show |
154 | 406 | 0.3793 | -9 | c.-21 others(28): Show |
LPAR5 | ENSG00000184574.10 | transcript | ENST00000329858.9 | protein_coding | 1/1 | chr12 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160534093 | GAAAACTG others(2): Show |
G | intron_variant | MODIFIER | HG02572.hp1 HG02647.hp2 HG02886.hp2 others(2): Show |
a0009a0025a0038 | a0009c0008a0025c0040a0038c0032 | a0009c0008t0002a0025c0040t0001a0038c0032t0002 | a0009c0008t0002g0016 a0009c0008t0002g0017 a0009c0008t0002g0018 others(2): Show |
5 | 148 | 0.0338 | -9 | c.584 others(28): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 37/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160584170 | TTTCTTCT others(2): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp2 HG00733.hp1 others(5): Show |
a0001a0002a0009others(2): Show | a0001c0001a0002c0012a0009c0008others(2): Show | a0001c0001t0001a0002c0012t0002a0009c0008t0002others(2): Show | a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 others(5): Show |
8 | 148 | 0.0541 | -9 | c.428 others(26): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 26/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160653966 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00741.hp1 HG02165.hp2 others(1): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0001a0003c0003t0001a0004c0004t0001 | a0001c0001t0001g0091 a0003c0003t0001g0090 a0004c0004t0001g0089 others(1): Show |
4 | 148 | 0.0270 | -9 | c.50- others(24): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 1/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160653974 | AATATATA others(2): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG02970.hp2 |
a0019a0028 | a0019c0045a0028c0043 | a0019c0045t0001a0028c0043t0001 | a0019c0045t0001g0047 a0028c0043t0001g0112 |
2 | 148 | 0.0135 | -9 | c.50- others(24): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 1/38 | chr6 | TogoVar | |||||||
LPCAT4_chr15_34353633_34372196 | 34371079 | CTCCTCCT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG02055.hp1 HG02451.hp1 NA19043.hp1 |
a0001a0004 | a0001c0001a0004c0008 | a0001c0001t0001a0004c0008t0001 | a0001c0001t0001g0018 a0004c0008t0001g0108 |
3 | 450 | 0.0067 | -9 | c.-39 others(20): Show |
LPCAT4 | ENSG00000176454.15 | transcript | ENST00000314891.11 | protein_coding | 3884 | chr15 | TogoVar |