view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LRP6_chr12_12111025_12272044 | 12218476 | CAATAATA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00423.hp1 others(88): Show |
a0001a0002a0007others(3): Show | a0001c0001a0001c0003a0001c0004others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(39): Show | a0001c0001t0001g0023 a0001c0001t0001g0108 a0001c0001t0001g0114 others(88): Show |
91 | 262 | 0.3473 | -9 | c.450 others(28): Show |
LRP6 | ENSG00000070018.9 | transcript | ENST00000261349.9 | protein_coding | 2/22 | chr12 | TogoVar | |||||||
LRPAP1_chr4_3498612_3537422 | 3536859 | CTTTTTTT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG02257.hp2 HG02280.hp1 HG02451.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0051a0001c0001t0128others(1): Show | a0001c0001t0005g0004 a0001c0001t0051g0209 a0001c0001t0051g0219 others(2): Show |
7 | 420 | 0.0167 | -9 | c.-44 others(20): Show |
LRPAP1 | ENSG00000163956.13 | transcript | ENST00000650182.1 | protein_coding | 4438 | chr4 | TogoVar | |||||||
LRPPRC_chr2_43881224_44000989 | 43909611 | TTAATAAT others(2): Show |
T | intron_variant | MODIFIER | HG01069.hp1 HG01070.hp1 HG01071.hp1 others(7): Show |
a0001 | a0001c0003 | a0001c0003t0002a0001c0003t0015a0001c0003t0020others(2): Show | a0001c0003t0002g0080 a0001c0003t0015g0334 a0001c0003t0020g0332 others(7): Show |
10 | 358 | 0.0279 | -9 | c.327 others(28): Show |
LRPPRC | ENSG00000138095.20 | transcript | ENST00000260665.12 | protein_coding | 30/37 | chr2 | TogoVar | |||||||
LRR1_chr14_49593940_49619672 | 49603701 | TTTTTTTT others(2): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02572.hp2 HG02895.hp2 others(5): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0008 a0003c0003t0001g0020 a0003c0003t0001g0117 others(2): Show |
8 | 312 | 0.0256 | -9 | c.282 others(26): Show |
LRR1 | ENSG00000165501.17 | transcript | ENST00000298288.11 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRR1_chr14_49593940_49619672 | 49606024 | TTTTTTTT others(2): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02572.hp2 HG02895.hp2 others(5): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0008 a0003c0003t0001g0020 a0003c0003t0001g0117 others(2): Show |
8 | 312 | 0.0256 | -9 | c.283 others(26): Show |
LRR1 | ENSG00000165501.17 | transcript | ENST00000298288.11 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRRC15_chr3_194350249_194374743 | 194371358 | GTCTCATG others(2): Show |
G | upstream_gene_variant | MODIFIER | HG02572.hp2 HG02647.hp2 HG03225.hp1 others(1): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0005a0001c0010t0004 | a0001c0001t0005g0013 a0001c0001t0005g0032 a0001c0010t0004g0072 |
4 | 358 | 0.0112 | -9 | c.-17 others(20): Show |
LRRC15 | ENSG00000172061.9 | transcript | ENST00000347624.4 | protein_coding | 1616 | chr3 | TogoVar | |||||||
LRRC25_chr19_18386137_18402622 | 18402007 | TAGAAAAA others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00642.hp1 others(158): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0002c0002others(4): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(17): Show | a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0017 others(67): Show |
161 | 434 | 0.3710 | -9 | c.-50 others(20): Show |
LRRC25 | ENSG00000175489.10 | transcript | ENST00000339007.4 | protein_coding | 4386 | chr19 | TogoVar | |||||||
LRRC27_chr10_132327193_132386508 | 132364594 | AGGCAGTC others(2): Show |
A | intron_variant | MODIFIER | HG01099.hp2 HG01515.hp1 HG02630.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0002t0004a0001c0003t0006others(5): Show | a0001c0001t0001g0031 a0001c0001t0001g0137 a0001c0002t0004g0216 others(7): Show |
10 | 290 | 0.0345 | -9 | c.129 others(26): Show |
LRRC27 | ENSG00000148814.18 | transcript | ENST00000368614.8 | protein_coding | 9/10 | chr10 | TogoVar | |||||||
LRRC28_chr15_99246481_99395729 | 99293593 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01981.hp1 HG02523.hp1 HG02523.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0029a0001c0001t0080a0001c0001t0098others(3): Show | a0001c0001t0029g0221 a0001c0001t0080g0214 a0001c0001t0098g0074 others(3): Show |
6 | 332 | 0.0181 | -9 | c.385 others(26): Show |
LRRC28 | ENSG00000168904.15 | transcript | ENST00000301981.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LRRC37A2_chr17_46507468_46560646 | 46525614 | AATCATCA others(2): Show |
A | intron_variant | MODIFIER | HG01071.hp1 HG01516.hp2 HG02886.hp2 others(2): Show |
a0001a0023 | a0001c0001a0023c0021 | a0001c0001t0001a0023c0021t0001 | a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0042 others(2): Show |
5 | 109 | 0.0459 | -9 | c.290 others(28): Show |
LRRC37A2 | ENSG00000238083.10 | transcript | ENST00000576629.6 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
LRRC39_chr1_100143448_100183256 | 100167778 | AAATAATA others(2): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG00733.hp2 HG01069.hp1 others(41): Show |
a0001a0002a0003 | a0001c0001a0001c0006a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0006t0001others(2): Show | a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0019 others(25): Show |
44 | 288 | 0.1528 | -9 | c.113 others(24): Show |
LRRC39 | ENSG00000122477.14 | transcript | ENST00000370137.6 | protein_coding | 3/9 | chr1 | TogoVar | |||||||
LRRC4C_chr11_40109209_41464652 | 40313599 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG01074.hp1 HG01261.hp1 HG02698.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0013 a0001c0001t0001g0035 a0001c0001t0002g0032 others(1): Show |
4 | 48 | 0.0833 | -9 | c.-17 others(28): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 4/6 | chr11 | TogoVar | |||||||
LRRC4C_chr11_40109209_41464652 | 40630330 | CTCTTCTT others(2): Show |
C | intron_variant | MODIFIER | HG02280.hp1 HG02698.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002 | a0001c0002t0001g0001 a0001c0002t0002g0012 |
2 | 48 | 0.0417 | -9 | c.-27 others(30): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 3/6 | chr11 | TogoVar | |||||||
LRRC4C_chr11_40109209_41464652 | 40860933 | GTAAAGAT others(2): Show |
G | intron_variant | MODIFIER | HG03098.hp1 HG03098.hp2 HG03139.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0027 others(1): Show |
4 | 48 | 0.0833 | -9 | c.-40 others(30): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 2/6 | chr11 | TogoVar | |||||||
LRRC51_chr11_72075850_72101895 | 72087287 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(231): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(83): Show |
234 | 336 | 0.6964 | -9 | c.-13 others(26): Show |
LRRC51 | ENSG00000184154.16 | transcript | ENST00000289488.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
LRRC56_chr11_532527_559912 | 535289 | CCCGCCGC others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00621.hp2 HG00741.hp1 NA18943.hp2 others(5): Show |
a0001a0022 | a0001c0001a0022c0035 | a0001c0001t0001a0001c0001t0002a0022c0035t0001 | a0001c0001t0001g0001 a0001c0001t0001g0168 a0001c0001t0001g0169 others(5): Show |
8 | 387 | 0.0207 | -9 | c.-27 others(20): Show |
LRRC56 | ENSG00000161328.11 | transcript | ENST00000270115.8 | protein_coding | 2237 | chr11 | TogoVar | |||||||
LRRC57_chr15_42532829_42553793 | 42544360 | TCAGACCA others(2): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp2 HG00733.hp2 others(35): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0013a0001c0001t0021others(17): Show | a0001c0001t0006g0011 a0001c0001t0006g0017 a0001c0001t0006g0029 others(26): Show |
38 | 356 | 0.1067 | -9 | c.679 others(24): Show |
LRRC57 | ENSG00000180979.10 | transcript | ENST00000397130.8 | protein_coding | 5/5 | chr15 | TogoVar | |||||||
LRRC59_chr17_50376238_50402523 | 50383605 | ATCATTAT others(2): Show |
A | intron_variant | MODIFIER | HG00741.hp2 HG02055.hp2 HG02258.hp1 others(4): Show |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0013 a0001c0002t0005g0016 a0001c0002t0005g0037 others(1): Show |
7 | 360 | 0.0194 | -9 | c.677 others(24): Show |
LRRC59 | ENSG00000108829.10 | transcript | ENST00000225972.8 | protein_coding | 6/6 | chr17 | TogoVar | |||||||
LRRC59_chr17_50376238_50402523 | 50388548 | AACCACCA others(2): Show |
A | intron_variant | MODIFIER | HG01891.hp2 HG02109.hp1 HG02486.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0011 | a0001c0001t0004g0005 a0001c0001t0004g0027 a0001c0001t0004g0100 others(3): Show |
18 | 360 | 0.0500 | -9 | c.430 others(24): Show |
LRRC59 | ENSG00000108829.10 | transcript | ENST00000225972.8 | protein_coding | 4/6 | chr17 | TogoVar | |||||||
LRRC69_chr8_91097619_91224257 | 91118351 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG02559.hp2 HG02615.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(3): Show |
6 | 318 | 0.0189 | -9 | c.184 others(26): Show |
LRRC69 | ENSG00000214954.9 | transcript | ENST00000448384.3 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
LRRC71_chr1_156915632_156938094 | 156928363 | CTCTTCTT others(2): Show |
C | intron_variant | MODIFIER | HG02132.hp1 HG02135.hp2 HG02300.hp2 others(3): Show |
a0001a0010 | a0001c0003a0010c0015 | a0001c0003t0001a0010c0015t0001 | a0001c0003t0001g0027 a0001c0003t0001g0115 a0001c0003t0001g0144 others(2): Show |
6 | 402 | 0.0149 | -9 | c.996 others(24): Show |
LRRC71 | ENSG00000160838.14 | transcript | ENST00000337428.8 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRC7_chr1_69562922_70149364 | 69595595 | ACTTTACA others(2): Show |
A | intron_variant | MODIFIER | HG01978.hp2 HG02647.hp1 HG02809.hp2 others(5): Show |
a0001a0003 | a0001c0001a0001c0009a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0056a0001c0001t0086others(5): Show | a0001c0001t0001g0099 a0001c0001t0056g0100 a0001c0001t0086g0092 others(5): Show |
8 | 108 | 0.0741 | -9 | c.2+2 others(24): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRC7_chr1_69562922_70149364 | 70054578 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG01167.hp1 HG01192.hp2 HG02055.hp1 others(5): Show |
a0001a0006 | a0001c0001a0001c0004a0006c0014 | a0001c0001t0003a0001c0001t0063a0001c0001t0068others(5): Show | a0001c0001t0003g0022 a0001c0001t0063g0057 a0001c0001t0068g0069 others(5): Show |
8 | 108 | 0.0741 | -9 | c.423 others(28): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 23/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRC8C_chr1_89628120_89724533 | 89643017 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG02257.hp1 HG02615.hp1 HG02630.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0007a0001c0001t0023others(1): Show | a0001c0001t0001g0024 a0001c0001t0007g0026 a0001c0001t0007g0027 others(3): Show |
6 | 268 | 0.0224 | -9 | c.-5+ others(24): Show |
LRRC8C | ENSG00000171488.15 | transcript | ENST00000370454.9 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRC8D_chr1_89816032_89941611 | 89860784 | AAATATAT others(2): Show |
A | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp1 HG01496.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0004 | a0001c0001t0001g0005 a0001c0001t0001g0023 a0001c0001t0001g0024 others(3): Show |
6 | 210 | 0.0286 | -9 | c.-3+ others(26): Show |
LRRC8D | ENSG00000171492.14 | transcript | ENST00000337338.9 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRC9_chr14_59915144_60071817 | 59965882 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00558.hp1 others(40): Show |
a0001a0005 | a0001c0001a0001c0002a0005c0011 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(11): Show | a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0213 others(40): Show |
43 | 322 | 0.1335 | -9 | c.121 others(26): Show |
LRRC9 | ENSG00000131951.12 | transcript | ENST00000570145.2 | protein_coding | 10/32 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRRCC1_chr8_85102238_85151080 | 85144465 | TATATATA others(2): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG01109.hp1 HG01261.hp2 others(18): Show |
a0001a0002a0010 | a0001c0001a0002c0002a0010c0009 | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(1): Show | a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0074 others(15): Show |
21 | 326 | 0.0644 | -9 | c.297 others(26): Show |
LRRCC1 | ENSG00000133739.16 | transcript | ENST00000360375.8 | protein_coding | 18/18 | chr8 | TogoVar | |||||||
LRRCC1_chr8_85102238_85151080 | 85144466 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(120): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0002c0002t0001a0002c0002t0004others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(62): Show |
123 | 326 | 0.3773 | -9 | c.297 others(26): Show |
LRRCC1 | ENSG00000133739.16 | transcript | ENST00000360375.8 | protein_coding | 18/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
LRRFIP1_chr2_237622587_237786643 | 237622755 | CTTTTTTT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00544.hp2 HG01074.hp2 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0034a0001c0002t0004others(2): Show | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 others(16): Show |
19 | 276 | 0.0688 | -9 | c.-48 others(20): Show |
LRRFIP1 | ENSG00000124831.20 | transcript | ENST00000308482.14 | protein_coding | 4831 | chr2 | TogoVar | |||||||
LRRFIP2_chr3_37047626_37179582 | 37087830 | CCACCCAC others(2): Show |
C | intron_variant | MODIFIER | HG01074.hp1 HG01099.hp1 HG01168.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0005 | a0001c0001t0003g0004 a0001c0001t0003g0202 a0001c0001t0003g0203 others(13): Show |
17 | 268 | 0.0634 | -9 | c.110 others(28): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 18/27 | chr3 | TogoVar | |||||||
LRRFIP2_chr3_37047626_37179582 | 37159989 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01074.hp1 HG01099.hp1 HG02572.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0004 a0001c0001t0003g0134 a0001c0001t0003g0200 others(4): Show |
8 | 268 | 0.0299 | -9 | c.-55 others(28): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 1/27 | chr3 | TogoVar | |||||||
LRRIQ1_chr12_85031351_85250105 | 85047154 | AAAAAAAA others(2): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp1 HG00738.hp2 others(29): Show |
a0001a0004a0008others(3): Show | a0001c0001a0001c0005a0001c0013others(5): Show | a0001c0001t0001a0001c0005t0001a0001c0013t0001others(5): Show | a0001c0001t0001g0013 a0001c0001t0001g0085 a0001c0001t0001g0086 others(29): Show |
32 | 228 | 0.1404 | -9 | c.455 others(22): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 5/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRIQ1_chr12_85031351_85250105 | 85086935 | CATTATTA others(2): Show |
C | intron_variant | MODIFIER | HG02055.hp2 HG02145.hp1 HG02630.hp2 others(8): Show |
a0001a0004 | a0001c0001a0001c0009a0004c0008 | a0001c0001t0001a0001c0009t0001a0001c0009t0004others(1): Show | a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0225 others(8): Show |
11 | 228 | 0.0483 | -9 | c.288 others(30): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 11/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRIQ1_chr12_85031351_85250105 | 85243313 | TTTATTAT others(2): Show |
T | intron_variant | MODIFIER | HG00544.hp1 HG00558.hp2 HG00621.hp1 others(27): Show |
a0001a0017 | a0001c0001a0017c0016 | a0001c0001t0001a0001c0001t0002a0017c0016t0002 | a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0216 others(27): Show |
30 | 228 | 0.1316 | -9 | c.501 others(28): Show |
LRRIQ1 | ENSG00000133640.20 | transcript | ENST00000393217.7 | protein_coding | 26/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRIQ3_chr1_74021015_74203176 | 74022362 | CAAAAAAA others(2): Show |
C | downstream_gene_variant | MODIFIER | HG01255.hp2 HG01261.hp1 HG01884.hp2 others(3): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0006c0006t0005a0006c0006t0006others(1): Show | a0001c0001t0001g0216 a0006c0006t0005g0268 a0006c0006t0005g0269 others(3): Show |
6 | 274 | 0.0219 | -9 | c.*44 others(20): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 3652 | chr1 | TogoVar | |||||||
LRRIQ3_chr1_74021015_74203176 | 74060212 | CTTCTTCT others(2): Show |
C | intron_variant | MODIFIER | HG00621.hp2 HG01175.hp2 HG01358.hp2 others(14): Show |
a0001a0003a0004others(1): Show | a0001c0001a0003c0003a0004c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0003c0003t0001others(2): Show | a0001c0001t0001g0209 a0001c0001t0002g0056 a0001c0001t0002g0066 others(13): Show |
17 | 274 | 0.0620 | -9 | c.997 others(28): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 6/7 | chr1 | TogoVar | |||||||
LRRIQ3_chr1_74021015_74203176 | 74060221 | GTTCTTCT others(2): Show |
G | intron_variant | MODIFIER | HG02683.hp1 HG04184.hp2 |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0131 a0002c0002t0003g0132 |
2 | 274 | 0.0073 | -9 | c.997 others(28): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 6/7 | chr1 | TogoVar | |||||||
LRRIQ3_chr1_74021015_74203176 | 74154240 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01099.hp1 HG01123.hp2 HG01257.hp2 others(5): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0003 | a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0220 others(5): Show |
8 | 274 | 0.0292 | -9 | c.707 others(26): Show |
LRRIQ3 | ENSG00000162620.16 | transcript | ENST00000354431.9 | protein_coding | 4/7 | chr1 | TogoVar | |||||||
LRRIQ4_chr3_169807870_169842773 | 169831440 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG01106.hp1 HG01123.hp1 HG01361.hp1 others(13): Show |
a0001a0002a0003 | a0001c0002a0002c0003a0003c0004 | a0001c0002t0001a0002c0003t0001a0003c0004t0001 | a0001c0002t0001g0088 a0001c0002t0001g0097 a0001c0002t0001g0160 others(11): Show |
16 | 386 | 0.0415 | -9 | c.133 others(26): Show |
LRRIQ4 | ENSG00000188306.7 | transcript | ENST00000340806.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRRK1_chr15_100914357_101083257 | 100968715 | CTTCCTCC others(2): Show |
C | intron_variant | MODIFIER | HG00621.hp1 HG01167.hp1 HG01169.hp2 others(22): Show |
a0001a0002a0006others(4): Show | a0001c0004a0001c0006a0001c0008others(18): Show | a0001c0004t0028a0001c0006t0159a0001c0008t0030others(21): Show | a0001c0004t0028g0150 a0001c0006t0159g0140 a0001c0008t0030g0324 others(22): Show |
25 | 338 | 0.0740 | -9 | c.98- others(24): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 2/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LRRK1_chr15_100914357_101083257 | 101008142 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00621.hp2 HG01109.hp1 others(16): Show |
a0001a0002a0006others(2): Show | a0001c0007a0001c0011a0001c0012others(11): Show | a0001c0007t0217a0001c0007t0218a0001c0011t0056others(13): Show | a0001c0007t0217g0107 a0001c0007t0218g0110 a0001c0011t0056g0336 others(16): Show |
19 | 338 | 0.0562 | -9 | c.763 others(24): Show |
LRRK1 | ENSG00000154237.13 | transcript | ENST00000388948.8 | protein_coding | 6/33 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
LRRK2_chr12_40219997_40374285 | 40371783 | GAAAAAAA others(2): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00639.hp1 HG00673.hp2 others(46): Show |
a0001a0005a0006others(3): Show | a0001c0002a0001c0003a0001c0005others(10): Show | a0001c0002t0003a0001c0003t0002a0001c0003t0003others(14): Show | a0001c0002t0003g0152 a0001c0003t0002g0157 a0001c0003t0003g0110 others(46): Show |
49 | 382 | 0.1283 | -9 | c.*40 others(20): Show |
LRRK2 | ENSG00000188906.17 | transcript | ENST00000298910.12 | protein_coding | 2499 | chr12 | TogoVar | |||||||
LRRN1_chr3_3794431_3854834 | 3812846 | CAAGTTTG others(2): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02109.hp1 HG02257.hp2 others(20): Show |
a0001a0003 | a0001c0001a0001c0004a0001c0005others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(14): Show | a0001c0001t0001g0083 a0001c0001t0001g0098 a0001c0001t0003g0023 others(20): Show |
23 | 422 | 0.0545 | -9 | c.-27 others(30): Show |
LRRN1 | ENSG00000175928.6 | transcript | ENST00000319331.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRRN3_chr7_111086127_111130454 | 111108136 | TTGGAGAC others(2): Show |
T | intron_variant | MODIFIER | HG02145.hp1 HG02647.hp1 HG02723.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 a0001c0001t0001g0081 a0001c0001t0001g0082 others(3): Show |
8 | 270 | 0.0296 | -9 | c.-35 others(28): Show |
LRRN3 | ENSG00000173114.13 | transcript | ENST00000308478.10 | protein_coding | 2/2 | chr7 | TogoVar | |||||||
LRRN3_chr7_111086127_111130454 | 111119777 | AGCCAGGC others(2): Show |
A | intron_variant | MODIFIER | HG03225.hp1 NA18906.hp1 NA19030.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0025 a0001c0002t0002g0126 a0001c0002t0002g0128 |
4 | 270 | 0.0148 | -9 | c.-35 others(28): Show |
LRRN3 | ENSG00000173114.13 | transcript | ENST00000308478.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LRRTM1_chr2_80296878_80309752 | 80306395 | TTTTCTTT others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00642.hp2 HG01074.hp1 HG01243.hp1 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(5): Show | a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0001g0002 others(5): Show |
21 | 418 | 0.0502 | -9 | c.-23 others(20): Show |
LRRTM1 | ENSG00000162951.11 | transcript | ENST00000295057.4 | protein_coding | 1644 | chr2 | TogoVar | |||||||
LRRTM3_chr10_66921036_67106551 | 66958308 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(26): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0018 others(26): Show |
29 | 294 | 0.0986 | -9 | c.153 others(30): Show |
LRRTM3 | ENSG00000198739.11 | transcript | ENST00000361320.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
LRRTM4_chr2_76742685_77527376 | 76851558 | AGAAATCA others(2): Show |
A | intron_variant | MODIFIER | NA18951.hp1 NA18970.hp1 NA19066.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0050 |
3 | 128 | 0.0234 | -9 | c.155 others(32): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 76936954 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00621.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004 | a0001c0001t0002g0029 a0001c0001t0002g0035 a0001c0001t0002g0103 others(9): Show |
12 | 128 | 0.0938 | -9 | c.155 others(32): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar | |||||||
LRRTM4_chr2_76742685_77527376 | 77083783 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00558.hp2 HG00735.hp2 HG01074.hp2 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0011 others(23): Show |
26 | 128 | 0.2031 | -9 | c.155 others(32): Show |
LRRTM4 | ENSG00000176204.14 | transcript | ENST00000409884.6 | protein_coding | 3/3 | chr2 | TogoVar |