view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNCA_chr4_89719099_89842161 | 89792291 | TTTGTTGT others(2): Show |
T | intron_variant | MODIFIER | HG00639.hp2 HG01167.hp1 HG01169.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0081 a0001c0001t0001g0126 a0001c0001t0001g0139 others(13): Show |
17 | 43 | 0.3953 | -9 | c.306 others(28): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SND1_chr7_127647194_128097593 | 128040150 | AGCCCAGG others(2): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00639.hp1 HG00639.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0120 a0001c0001t0003g0064 a0001c0001t0003g0065 others(12): Show |
15 | 260 | 0.0577 | -9 | c.178 others(30): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 16/23 | chr7 | TogoVar | |||||||
SNED1_chr2_240993618_241100568 | 241011166 | AGGTCTCC others(2): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG00609.hp1 HG00609.hp2 others(60): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0006others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(31): Show | a0001c0001t0001g0290 a0001c0001t0002g0005 a0001c0001t0002g0252 others(60): Show |
63 | 342 | 0.1842 | -9 | c.213 others(28): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 1/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNED1_chr2_240993618_241100568 | 241016484 | CCACGCCC others(2): Show |
C | intron_variant | MODIFIER | HG00438.hp1 HG00609.hp2 HG00621.hp2 others(53): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0006a0001c0025others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(29): Show | a0001c0001t0001g0290 a0001c0001t0002g0005 a0001c0001t0002g0252 others(53): Show |
56 | 342 | 0.1637 | -9 | c.214 others(28): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 1/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNRPB_chr20_2456642_2475789 | 2472054 | TAAAAAAG others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(183): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0004a0001c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0008 others(31): Show |
186 | 270 | 0.6889 | -9 | c.-13 others(20): Show |
SNRPB | ENSG00000125835.20 | transcript | ENST00000381342.7 | protein_coding | 1266 | chr20 | TogoVar | |||||||
SNRPC_chr6_34752505_34778857 | 34752678 | CAAAAAAA others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00597.hp2 HG00609.hp2 HG01175.hp1 others(50): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0008 others(26): Show |
53 | 92 | 0.5761 | -9 | c.-48 others(20): Show |
SNRPC | ENSG00000124562.10 | transcript | ENST00000244520.10 | protein_coding | 4826 | chr6 | TogoVar | |||||||
SNRPE_chr1_203856599_203876152 | 203869289 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02559.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0022 a0001c0001t0001g0031 a0001c0001t0002g0087 others(6): Show |
15 | 20 | 0.7500 | -9 | c.224 others(24): Show |
SNRPE | ENSG00000182004.13 | transcript | ENST00000414487.7 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNRPG_chr2_70276362_70298740 | 70293122 | GAGGTTTC others(2): Show |
G | intron_variant | MODIFIER | HG02723.hp2 HG03453.hp2 HG03486.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 others(1): Show |
4 | 424 | 0.0094 | -9 | c.32+ others(22): Show |
SNRPG | ENSG00000143977.14 | transcript | ENST00000272348.7 | protein_coding | 1/3 | chr2 | TogoVar | |||||||
SNRPN_chr15_24949987_24983723 | 24958486 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00738.hp2 HG01346.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0050 others(7): Show |
21 | 61 | 0.3443 | -9 | c.-39 others(28): Show |
SNRPN | ENSG00000128739.23 | transcript | ENST00000390687.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNTA1_chr20_33402957_33448763 | 33418792 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01168.hp1 HG01981.hp2 others(7): Show |
a0001a0004 | a0001c0001a0004c0007 | a0001c0001t0001a0004c0007t0001 | a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0136 others(7): Show |
10 | 162 | 0.0617 | -9 | c.497 others(24): Show |
SNTA1 | ENSG00000101400.6 | transcript | ENST00000217381.3 | protein_coding | 2/7 | chr20 | TogoVar | |||||||
SNTB1_chr8_120530756_120817046 | 120571479 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00609.hp1 HG00639.hp2 others(37): Show |
a0001a0004a0005 | a0001c0001a0001c0002a0004c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0016 a0001c0001t0001g0082 a0001c0001t0001g0109 others(37): Show |
40 | 121 | 0.3306 | -9 | c.113 others(28): Show |
SNTB1 | ENSG00000172164.15 | transcript | ENST00000517992.2 | protein_coding | 4/6 | chr8 | TogoVar | |||||||
SNTB2_chr16_69182164_69314052 | 69243020 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG01433.hp2 HG02809.hp2 HG02922.hp2 others(3): Show |
a0001a0002 | a0001c0002a0002c0005 | a0001c0002t0014a0001c0002t0021a0002c0005t0033 | a0001c0002t0014g0070 a0001c0002t0014g0071 a0001c0002t0014g0072 others(3): Show |
6 | 207 | 0.0290 | -9 | c.581 others(26): Show |
SNTB2 | ENSG00000168807.17 | transcript | ENST00000336278.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50069583 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG03453.hp1 HG03491.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0002a0001c0001t0008a0001c0001t0015others(5): Show | a0001c0001t0002g0013 a0001c0001t0008g0071 a0001c0001t0015g0001 others(5): Show |
8 | 47 | 0.1702 | -9 | c.-10 others(32): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50138628 | CAATAATA others(2): Show |
C | intron_variant | MODIFIER | HG02886.hp1 HG03453.hp1 NA19240.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0008a0001c0001t0015others(1): Show | a0001c0001t0004g0072 a0001c0001t0008g0071 a0001c0001t0015g0001 others(1): Show |
4 | 54 | 0.0741 | -9 | c.-10 others(30): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50386449 | GATTAACA others(2): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00621.hp1 HG01071.hp2 others(48): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0086 a0001c0001t0002g0010 a0001c0001t0002g0015 others(48): Show |
51 | 106 | 0.4811 | -9 | c.-27 others(26): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50462794 | CTCTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00621.hp1 HG00741.hp1 HG01978.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0028a0001c0001t0035others(3): Show | a0001c0001t0002g0068 a0001c0001t0028g0093 a0001c0001t0035g0031 others(9): Show |
12 | 68 | 0.1765 | -9 | c.363 others(28): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 8/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50570579 | ATTATTAT others(2): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG02698.hp2 HG02886.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0010a0001c0002t0014others(2): Show | a0001c0001t0004g0072 a0001c0002t0010g0012 a0001c0002t0014g0014 others(3): Show |
6 | 106 | 0.0566 | -9 | c.810 others(28): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 12/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50587320 | TATCTTAT others(2): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG02451.hp1 HG02698.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(5): Show | a0001c0001t0002g0026 a0001c0001t0004g0072 a0001c0001t0006g0051 others(7): Show |
10 | 106 | 0.0943 | -9 | c.811 others(26): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 12/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50601152 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01167.hp2 HG02451.hp1 HG02886.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(3): Show | a0001c0001t0002g0026 a0001c0001t0004g0072 a0001c0001t0006g0051 others(5): Show |
8 | 10 | 0.8000 | -9 | c.849 others(28): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50799520 | CTCCAATG others(2): Show |
C | downstream_gene_variant | MODIFIER | HG02109.hp2 HG02809.hp1 HG02965.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0007a0001c0001t0015a0002c0003t0018 | a0001c0001t0007g0036 a0001c0001t0007g0037 a0001c0001t0007g0039 others(2): Show |
5 | 106 | 0.0472 | -9 | c.*66 others(20): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 2829 | chr8 | TogoVar | |||||||
SNTG2_chr2_945849_1372613 | 996673 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG02486.hp1 HG03490.hp1 NA18961.hp1 others(2): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0003c0007others(2): Show | a0001c0001t0001a0001c0002t0001a0003c0007t0001others(2): Show | a0001c0001t0001g0130 a0001c0002t0001g0186 a0003c0007t0001g0007 others(2): Show |
5 | 6 | 0.8333 | -9 | c.72+ others(26): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1149672 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG01192.hp2 HG01346.hp1 HG01975.hp2 others(6): Show |
a0001a0004a0006others(1): Show | a0001c0002a0004c0004a0004c0014others(2): Show | a0001c0002t0001a0004c0004t0001a0004c0014t0001others(2): Show | a0001c0002t0001g0006 a0001c0002t0001g0009 a0001c0002t0001g0024 others(6): Show |
9 | 11 | 0.8182 | -9 | c.411 others(28): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1251429 | CCACACAC others(2): Show |
C | intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG01192.hp1 others(17): Show |
a0003a0005a0006others(3): Show | a0003c0007a0003c0008a0005c0006others(5): Show | a0003c0007t0001a0003c0008t0001a0005c0006t0001others(5): Show | a0003c0007t0001g0019 a0003c0007t0001g0068 a0003c0007t0001g0080 others(17): Show |
20 | 188 | 0.1064 | -9 | c.100 others(28): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 12/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNURF_chr15_24949987_24973821 | 24958486 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00738.hp2 HG01346.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0059 others(5): Show |
21 | 68 | 0.3088 | -9 | c.14+ others(24): Show |
SNURF | ENSG00000273173.6 | transcript | ENST00000577949.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNW1_chr14_77712599_77766156 | 77764521 | TTTACTTC others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00642.hp1 HG00735.hp2 HG00741.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0181 others(6): Show |
10 | 364 | 0.0275 | -9 | c.-34 others(20): Show |
SNW1 | ENSG00000100603.14 | transcript | ENST00000261531.12 | protein_coding | 3366 | chr14 | TogoVar | |||||||
SNX10_chr7_26286862_26379383 | 26291922 | TGCGCGGG others(2): Show |
T | 5_prime_UTR_variant | MODIFIER | HG02074.hp1 HG02486.hp2 HG03471.hp1 |
a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0021 a0001c0001t0012g0091 a0001c0001t0012g0092 |
3 | 329 | 0.0091 | -9 | c.-16 others(18): Show |
SNX10 | ENSG00000086300.17 | transcript | ENST00000338523.9 | protein_coding | 1/7 | 54486 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SNX14_chr6_85500496_85598858 | 85516585 | TTATAGGC others(2): Show |
T | intron_variant | MODIFIER | HG02818.hp2 HG03098.hp1 HG03195.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 |
3 | 358 | 0.0084 | -9 | c.226 others(28): Show |
SNX14 | ENSG00000135317.14 | transcript | ENST00000314673.8 | protein_coding | 23/28 | chr6 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81842373 | AGGGAGGG others(2): Show |
A | upstream_gene_variant | MODIFIER | HG00423.hp2 HG00673.hp2 HG01934.hp2 others(4): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0004a0001c0005t0004 | a0001c0001t0004g0006 a0001c0001t0004g0015 a0001c0001t0004g0120 others(3): Show |
7 | 279 | 0.0251 | -9 | c.-35 others(18): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 189 | chr8 | TogoVar | |||||||
SNX1_chr15_64090982_64149231 | 64141024 | GATGATAG others(2): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01123.hp2 HG02004.hp1 HG02976.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0004 a0001c0001t0012g0095 a0001c0001t0012g0195 others(1): Show |
4 | 268 | 0.0149 | -9 | c.*34 others(20): Show |
SNX1 | ENSG00000028528.15 | transcript | ENST00000559844.6 | protein_coding | 15/15 | 3409 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SNX25_chr4_185204598_185368966 | 185241517 | AGAGGGAG others(2): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(94): Show |
a0001a0002a0005others(3): Show | a0001c0001a0001c0003a0001c0009others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(94): Show |
97 | 274 | 0.3540 | -9 | c.430 others(26): Show |
SNX25 | ENSG00000109762.17 | transcript | ENST00000652585.2 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12013501 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG02976.hp1 HG03540.hp1 NA18906.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0110a0001c0002t0018a0001c0003t0052others(2): Show | a0001c0001t0110g0139 a0001c0002t0018g0034 a0001c0003t0052g0117 others(2): Show |
5 | 163 | 0.0307 | -9 | c.122 others(28): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 3/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12056957 | GACTATAG others(2): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00639.hp1 others(31): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0010others(28): Show | a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0007g0150 others(31): Show |
34 | 174 | 0.1954 | -9 | c.112 others(28): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 8/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12249035 | AATACTTT others(2): Show |
A | intron_variant | MODIFIER | HG03491.hp2 HG04115.hp1 |
a0001 | a0001c0004 | a0001c0004t0005a0001c0004t0093 | a0001c0004t0005g0115 a0001c0004t0093g0151 |
2 | 174 | 0.0115 | -9 | c.167 others(30): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 14/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12323173 | TGGAGTCA others(2): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01884.hp1 HG01884.hp2 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0028others(13): Show | a0001c0001t0002g0065 a0001c0001t0007g0016 a0001c0001t0007g0150 others(14): Show |
17 | 174 | 0.0977 | -9 | c.178 others(30): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12355843 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG01167.hp2 HG01175.hp1 others(10): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0013a0001c0001t0017a0001c0001t0031others(10): Show | a0001c0001t0013g0056 a0001c0001t0017g0025 a0001c0001t0031g0143 others(10): Show |
13 | 41 | 0.3171 | -9 | c.178 others(26): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12483114 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00733.hp2 HG01099.hp1 HG01175.hp1 others(14): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0008a0001c0001t0009a0001c0001t0013others(14): Show | a0001c0001t0008g0008 a0001c0001t0009g0137 a0001c0001t0013g0056 others(14): Show |
17 | 70 | 0.2429 | -9 | c.217 others(28): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12547120 | ACATCACA others(2): Show |
A | intron_variant | MODIFIER | HG01261.hp2 HG02258.hp1 HG02615.hp2 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0024a0001c0002t0105a0001c0003t0016 | a0001c0002t0024g0050 a0001c0002t0105g0069 a0001c0003t0016g0029 |
3 | 174 | 0.0172 | -9 | c.231 others(30): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12564934 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(51): Show |
a0001a0005a0007 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0028a0001c0002t0003a0001c0002t0005others(40): Show | a0001c0001t0028g0123 a0001c0002t0003g0051 a0001c0002t0003g0136 others(51): Show |
54 | 67 | 0.8060 | -9 | c.231 others(28): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 20/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12575863 | GTTTTTAT others(2): Show |
G | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00639.hp2 others(24): Show |
a0001 | a0001c0002a0001c0004a0001c0015others(1): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0022others(21): Show | a0001c0002t0003g0051 a0001c0002t0003g0160 a0001c0002t0005g0032 others(24): Show |
27 | 149 | 0.1812 | -9 | c.*72 others(20): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1577 | chr16 | TogoVar | |||||||
SNX30_chr9_112745760_112879987 | 112771114 | ATACTTGG others(2): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(281): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(45): Show | a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 others(281): Show |
284 | 336 | 0.8452 | -9 | c.156 others(28): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112817401 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00597.hp2 HG00639.hp2 others(44): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0002g0025 a0001c0001t0002g0033 a0001c0001t0002g0043 others(44): Show |
47 | 54 | 0.8704 | -9 | c.349 others(24): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX30_chr9_112745760_112879987 | 112822532 | TTTTGTTT others(2): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(20): Show |
a0002 | a0002c0003a0002c0010 | a0002c0003t0002a0002c0003t0004a0002c0003t0011others(3): Show | a0002c0003t0002g0009 a0002c0003t0004g0002 a0002c0003t0004g0004 others(20): Show |
23 | 336 | 0.0685 | -9 | c.459 others(26): Show |
SNX30 | ENSG00000148158.17 | transcript | ENST00000374232.8 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNX31_chr8_100567889_100654665 | 100641566 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG00621.hp1 HG01109.hp2 HG01167.hp1 others(6): Show |
a0003a0005a0007 | a0003c0003a0005c0005a0007c0007 | a0003c0003t0003a0003c0003t0005a0003c0003t0006others(5): Show | a0003c0003t0003g0291 a0003c0003t0005g0048 a0003c0003t0006g0113 others(6): Show |
9 | 257 | 0.0350 | -9 | c.142 others(26): Show |
SNX31 | ENSG00000174226.9 | transcript | ENST00000311812.7 | protein_coding | 2/13 | chr8 | TogoVar | |||||||
SNX4_chr3_125441650_125525202 | 125506817 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00642.hp1 HG00733.hp1 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 others(36): Show |
39 | 83 | 0.4699 | -9 | c.142 others(26): Show |
SNX4 | ENSG00000114520.11 | transcript | ENST00000251775.9 | protein_coding | 1/13 | chr3 | TogoVar | |||||||
SNX6_chr14_34556093_34635148 | 34557496 | ATTCTTCT others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00741.hp2 HG01099.hp2 HG02083.hp2 others(11): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0055 a0001c0002t0002g0058 a0001c0002t0002g0065 others(11): Show |
14 | 81 | 0.1728 | -9 | c.*56 others(20): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 3596 | chr14 | TogoVar | |||||||
SNX7_chr1_98656721_98765500 | 98663252 | GGTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00544.hp1 HG00642.hp1 HG01106.hp2 others(44): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0002t0001a0001c0004t0001 | a0001c0001t0001g0017 a0001c0001t0001g0104 a0001c0001t0001g0199 others(44): Show |
47 | 57 | 0.8246 | -9 | c.180 others(26): Show |
SNX7 | ENSG00000162627.17 | transcript | ENST00000306121.8 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157823038 | GGGCGGCG others(2): Show |
G | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00423.hp1 others(53): Show |
a0002 | a0002c0002a0002c0007 | a0002c0002t0002a0002c0002t0008a0002c0002t0012others(1): Show | a0002c0002t0002g0003 a0002c0002t0002g0004 a0002c0002t0002g0005 others(53): Show |
56 | 293 | 0.1911 | -9 | c.-39 others(18): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 207 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157827489 | ACTTATAG others(2): Show |
A | intron_variant | MODIFIER | HG02280.hp2 HG02559.hp2 HG02965.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0001t0004a0001c0001t0013others(2): Show | a0001c0001t0003g0252 a0001c0001t0003g0257 a0001c0001t0004g0066 others(3): Show |
6 | 235 | 0.0255 | -9 | c.12+ others(24): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157834149 | GGTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00438.hp2 HG00621.hp1 NA18990.hp2 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0014 a0002c0002t0002g0015 a0002c0002t0002g0016 others(1): Show |
4 | 187 | 0.0214 | -9 | c.12+ others(26): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | chr6 | TogoVar | |||||||
SNX9_chr6_157818246_157950077 | 157927718 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00408.hp2 others(81): Show |
a0001a0002a0003 | a0001c0003a0001c0009a0002c0002others(1): Show | a0001c0003t0003a0001c0003t0005a0001c0003t0022others(5): Show | a0001c0003t0003g0002 a0001c0003t0003g0175 a0001c0003t0003g0250 others(80): Show |
84 | 239 | 0.3515 | -9 | c.118 others(26): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 11/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar |