regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ATP6V1C2_chr2_10716630_10790110 | 10782829 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG00544.hp2 HG00741.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0007 | a0001c0001t0002a0002c0002t0002a0002c0007t0009 | a0001c0001t0002g0017a0001c0001t0002g0264a0001c0001t0002g0338others(3): Show | 6 | 354 | 0.0170 | -9 | c.119 others(26): Show |
ATP6V1C2 | ENSG00000143882.12 | transcript | ENST00000272238.9 | protein_coding | 13/13 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
ATP6V1E2_chr2_46506847_46547577 | 46510471 | CAAAAAAA others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00597.hp2 HG00639.hp1 others(55): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(1): Show | a0001c0001t0001g0022a0001c0001t0001g0023a0001c0001t0001g0049others(52): Show | 58 | 410 | 0.1415 | -9 | c.*15 others(20): Show |
ATP6V1E2 | ENSG00000250565.7 | transcript | ENST00000522587.6 | protein_coding | 1375 | chr2 | TogoVar | ||||||
ATP6V1H_chr8_53710543_53848245 | 53765451 | AACAACAC others(2): Show |
A | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00423.hp1 others(46): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0005 | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(1): Show | a0001c0001t0001g0023a0001c0001t0001g0024a0001c0001t0001g0070others(46): Show | 49 | 286 | 0.1713 | -9 | c.117 others(28): Show |
ATP6V1H | ENSG00000047249.18 | transcript | ENST00000359530.7 | protein_coding | 11/13 | chr8 | TogoVar | ||||||
ATP6V1H_chr8_53710543_53848245 | 53801216 | GTAGATTT others(2): Show |
G | intron_variant | MODIFIER | HG02055.hp1 HG02559.hp2 HG02572.hp1 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0244a0001c0001t0001g0245a0001c0001t0001g0246others(21): Show | 24 | 286 | 0.0839 | -9 | c.677 others(24): Show |
ATP6V1H | ENSG00000047249.18 | transcript | ENST00000359530.7 | protein_coding | 8/13 | chr8 | TogoVar | ||||||
ATP8A1_chr4_42403373_42662105 | 42555130 | TATCTATC others(2): Show |
T | intron_variant | MODIFIER | HG01069.hp2 HG01109.hp2 HG01496.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0022 | a0001c0001t0001g0087a0001c0001t0001g0177a0001c0001t0001g0178others(1): Show | 4 | 310 | 0.0129 | -9 | c.141 others(26): Show |
ATP8A1 | ENSG00000124406.17 | transcript | ENST00000381668.9 | protein_coding | 16/36 | chr4 | TogoVar | ||||||
ATP8A2_chr13_25366974_26030851 | 25531245 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG01069.hp2 HG01074.hp1 others(39): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0002a0001c0001t0015a0001c0001t0024others(33): Show | a0001c0001t0002g0079a0001c0001t0015g0016a0001c0001t0024g0003others(39): Show | 42 | 122 | 0.3443 | -9 | c.420 others(24): Show |
ATP8A2 | ENSG00000132932.19 | transcript | ENST00000381655.7 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
ATP8A2_chr13_25366974_26030851 | 25531272 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG00642.hp1 HG00741.hp1 HG01070.hp1 others(7): Show |
a0001 | a0001c0001a0001c0003a0001c0007 | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(5): Show | a0001c0001t0001g0036a0001c0001t0003g0093a0001c0001t0011g0061others(7): Show | 10 | 122 | 0.0820 | -9 | c.420 others(24): Show |
ATP8A2 | ENSG00000132932.19 | transcript | ENST00000381655.7 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
ATP8A2_chr13_25366974_26030851 | 25637092 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00741.hp1 HG02015.hp1 HG02273.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0011a0001c0001t0059a0001c0002t0028others(7): Show | a0001c0001t0011g0061a0001c0001t0059g0022a0001c0002t0028g0014others(7): Show | 10 | 122 | 0.0820 | -9 | c.221 others(30): Show |
ATP8A2 | ENSG00000132932.19 | transcript | ENST00000381655.7 | protein_coding | 24/36 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
ATP8A2_chr13_25366974_26030851 | 25837426 | CACACACA others(2): Show |
C | intron_variant | MODIFIER | HG02257.hp2 HG02280.hp2 HG02896.hp1 others(2): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0005a0001c0001t0026a0001c0001t0035others(2): Show | a0001c0001t0005g0102a0001c0001t0026g0090a0001c0001t0035g0043others(2): Show | 5 | 122 | 0.0410 | -9 | c.287 others(26): Show |
ATP8A2 | ENSG00000132932.19 | transcript | ENST00000381655.7 | protein_coding | 29/36 | chr13 | TogoVar | ||||||
ATP8A2_chr13_25366974_26030851 | 25882894 | AGATGATG others(2): Show |
A | intron_variant | MODIFIER | HG02723.hp2 HG03453.hp2 HG03486.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0030a0001c0002t0028a0001c0003t0008others(2): Show | a0001c0001t0030g0087a0001c0002t0028g0014a0001c0003t0008g0010others(2): Show | 5 | 122 | 0.0410 | -9 | c.318 others(30): Show |
ATP8A2 | ENSG00000132932.19 | transcript | ENST00000381655.7 | protein_coding | 33/36 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
ATP8B1_chr18_57641426_57808315 | 57653682 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00741.hp1 others(30): Show |
a0001a0010 | a0001c0001a0001c0019a0010c0010 | a0001c0001t0001a0001c0001t0006a0001c0001t0013others(4): Show | a0001c0001t0001g0107a0001c0001t0006g0023a0001c0001t0006g0030others(30): Show | 33 | 314 | 0.1051 | -9 | c.301 others(26): Show |
ATP8B1 | ENSG00000081923.15 | transcript | ENST00000648908.2 | protein_coding | 24/27 | chr18 | TogoVar | ||||||
ATP8B1_chr18_57641426_57808315 | 57752217 | AATAATAA others(2): Show |
A | intron_variant | MODIFIER | HG01943.hp1 HG02004.hp1 HG03490.hp1 others(1): Show |
a0001a0010 | a0001c0001a0010c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0014a0001c0001t0003g0265a0001c0001t0006g0082others(1): Show | 4 | 314 | 0.0127 | -9 | c.-25 others(28): Show |
ATP8B1 | ENSG00000081923.15 | transcript | ENST00000648908.2 | protein_coding | 1/27 | chr18 | TogoVar | ||||||
ATP8B4_chr15_49853238_50124233 | 50098266 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG01099.hp2 HG01257.hp2 NA18995.hp2 others(2): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0021others(2): Show | a0001c0001t0002a0002c0002t0002a0002c0021t0002others(2): Show | a0001c0001t0002g0072a0002c0002t0002g0028a0002c0021t0002g0039others(2): Show | 5 | 254 | 0.0197 | -9 | c.28+ others(24): Show |
ATP8B4 | ENSG00000104043.15 | transcript | ENST00000284509.11 | protein_coding | 2/27 | chr15 | TogoVar | ||||||
ATP9A_chr20_51591514_51773390 | 51637306 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG02109.hp1 HG02647.hp1 others(3): Show |
a0001 | a0001c0003 | a0001c0003t0007a0001c0003t0010a0001c0003t0022others(1): Show | a0001c0003t0007g0130a0001c0003t0010g0112a0001c0003t0010g0155others(3): Show | 6 | 312 | 0.0192 | -9 | c.166 others(28): Show |
ATP9A | ENSG00000054793.14 | transcript | ENST00000338821.6 | protein_coding | 15/27 | chr20 | TogoVar | ||||||
ATP9A_chr20_51591514_51773390 | 51726889 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00741.hp2 HG02109.hp1 HG02976.hp1 others(3): Show |
a0001 | a0001c0003a0001c0004a0001c0016 | a0001c0003t0007a0001c0003t0010a0001c0003t0022others(3): Show | a0001c0003t0007g0130a0001c0003t0010g0228a0001c0003t0022g0131others(3): Show | 6 | 312 | 0.0192 | -9 | c.214 others(24): Show |
ATP9A | ENSG00000054793.14 | transcript | ENST00000338821.6 | protein_coding | 2/27 | chr20 | TogoVar | ||||||
ATP9A_chr20_51591514_51773390 | 51753454 | AAACAACA others(2): Show |
A | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp2 HG01081.hp1 others(44): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0009others(27): Show | a0001c0001t0003g0124a0001c0001t0003g0125a0001c0001t0007g0267others(44): Show | 47 | 312 | 0.1506 | -9 | c.68+ others(26): Show |
ATP9A | ENSG00000054793.14 | transcript | ENST00000338821.6 | protein_coding | 1/27 | chr20 | TogoVar | ||||||
ATP9B_chr18_79064394_79383283 | 79348789 | CTGGCTAA others(2): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG01884.hp2 HG01891.hp2 others(3): Show |
a0002a0005 | a0002c0032a0005c0009 | a0002c0032t0005a0005c0009t0005 | a0002c0032t0005g0195a0005c0009t0005g0165a0005c0009t0005g0166others(3): Show | 6 | 298 | 0.0201 | -9 | c.290 others(26): Show |
ATP9B | ENSG00000166377.21 | transcript | ENST00000426216.6 | protein_coding | 25/29 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
ATPSCKMT_chr5_10220507_10254888 | 10249926 | AAAAAAAA others(2): Show |
A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG00741.hp2 others(8): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0001 | a0001c0002t0002a0001c0002t0022a0001c0003t0002others(2): Show | a0001c0002t0002g0014a0001c0002t0002g0130a0001c0002t0022g0059others(5): Show | 11 | 358 | 0.0307 | -9 | c.-62 others(16): Show |
ATPSCKMT | ENSG00000150756.14 | transcript | ENST00000511437.6 | protein_coding | 39 | chr5 | TogoVar | ||||||
ATRAID_chr2_27207041_27222157 | 27220484 | ACAAAAAA others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00639.hp1 HG00733.hp1 HG01167.hp1 others(26): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0003 | a0002c0002t0002g0003a0002c0002t0002g0009a0002c0002t0003g0003others(4): Show | 29 | 302 | 0.0960 | -9 | c.*35 others(20): Show |
ATRAID | ENSG00000138085.18 | transcript | ENST00000380171.9 | protein_coding | 3328 | chr2 | TogoVar | ||||||
ATRNL1_chr10_115088365_115953999 | 115177895 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG01081.hp2 HG03195.hp2 NA19240.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0015a0001c0001t0043 | a0001c0001t0003g0093a0001c0001t0015g0064a0001c0001t0043g0094 | 3 | 128 | 0.0234 | -9 | c.134 others(28): Show |
ATRNL1 | ENSG00000107518.18 | transcript | ENST00000355044.8 | protein_coding | 8/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
ATRNL1_chr10_115088365_115953999 | 115213645 | GTCTACAC others(2): Show |
G | intron_variant | MODIFIER | HG03540.hp2 NA19043.hp2 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0008a0001c0006t0033 | a0001c0001t0008g0014a0001c0006t0033g0035 | 2 | 128 | 0.0156 | -9 | c.134 others(28): Show |
ATRNL1 | ENSG00000107518.18 | transcript | ENST00000355044.8 | protein_coding | 8/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
ATRNL1_chr10_115088365_115953999 | 115291977 | GCCATCTG others(2): Show |
G | intron_variant | MODIFIER | HG01258.hp1 HG01515.hp2 HG01943.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(6): Show | a0001c0001t0001g0120a0001c0001t0002g0077a0001c0001t0002g0080others(9): Show | 12 | 128 | 0.0938 | -9 | c.241 others(28): Show |
ATRNL1 | ENSG00000107518.18 | transcript | ENST00000355044.8 | protein_coding | 15/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
ATRNL1_chr10_115088365_115953999 | 115492586 | TTATATAT others(2): Show |
T | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp2 HG02622.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0020 | a0001c0001t0002g0113a0001c0001t0002g0114a0001c0001t0020g0115 | 3 | 128 | 0.0234 | -9 | c.365 others(30): Show |
ATRNL1 | ENSG00000107518.18 | transcript | ENST00000355044.8 | protein_coding | 24/28 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
ATRN_chr20_3466018_3656118 | 3504688 | GATAATAA others(2): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00639.hp2 HG00735.hp2 others(18): Show |
a0001a0004a0007others(1): Show | a0001c0001a0001c0002a0001c0007others(5): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0010others(11): Show | a0001c0001t0001g0031a0001c0001t0001g0042a0001c0001t0001g0048others(18): Show | 21 | 220 | 0.0955 | -9 | c.411 others(28): Show |
ATRN | ENSG00000088812.18 | transcript | ENST00000262919.10 | protein_coding | 1/28 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
ATRN_chr20_3466018_3656118 | 3602963 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG02615.hp1 HG02647.hp2 HG02976.hp1 others(3): Show |
a0001a0004 | a0001c0003a0004c0011a0004c0016 | a0001c0003t0010a0001c0003t0035a0004c0011t0004others(2): Show | a0001c0003t0010g0206a0001c0003t0035g0205a0004c0011t0004g0165others(3): Show | 6 | 220 | 0.0273 | -9 | c.364 others(28): Show |
ATRN | ENSG00000088812.18 | transcript | ENST00000262919.10 | protein_coding | 23/28 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
ATRN_chr20_3466018_3656118 | 3630916 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG01496.hp1 HG01891.hp1 HG02280.hp1 others(6): Show |
a0001a0002a0004others(3): Show | a0001c0002a0001c0013a0002c0004others(5): Show | a0001c0002t0008a0001c0013t0008a0002c0004t0011others(5): Show | a0001c0002t0008g0142a0001c0013t0008g0171a0002c0004t0011g0152others(6): Show | 9 | 220 | 0.0409 | -9 | c.386 others(28): Show |
ATRN | ENSG00000088812.18 | transcript | ENST00000262919.10 | protein_coding | 25/28 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
ATRX_chrX_77499880_77791216 | 77559449 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG02083.hp1 NA18964.hp2 NA19056.hp1 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0018a0002c0002t0001g0044a0002c0002t0001g0061others(1): Show | 4 | 218 | 0.0184 | -9 | c.632 others(26): Show |
ATRX | ENSG00000085224.23 | transcript | ENST00000373344.11 | protein_coding | 28/34 | chrX | TogoVar | ||||||
ATRX_chrX_77499880_77791216 | 77585583 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG02257.hp1 HG02451.hp2 others(10): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0087a0001c0001t0001g0195a0001c0001t0003g0084others(10): Show | 13 | 218 | 0.0596 | -9 | c.621 others(28): Show |
ATRX | ENSG00000085224.23 | transcript | ENST00000373344.11 | protein_coding | 27/34 | chrX | TogoVar | ||||||
ATRX_chrX_77499880_77791216 | 77634232 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG00558.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0186 | 1 | 218 | 0.0046 | -9 | c.480 others(26): Show |
ATRX | ENSG00000085224.23 | transcript | ENST00000373344.11 | protein_coding | 17/34 | chrX | TogoVar | ||||||
ATRX_chrX_77499880_77791216 | 77716110 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG02055.hp1 HG02970.hp2 others(1): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0005a0001c0001t0008a0001c0001t0021others(1): Show | a0001c0001t0005g0213a0001c0001t0008g0077a0001c0001t0021g0078others(1): Show | 4 | 218 | 0.0184 | -9 | c.133 others(26): Show |
ATRX | ENSG00000085224.23 | transcript | ENST00000373344.11 | protein_coding | 2/34 | chrX | TogoVar | ||||||
ATRX_chrX_77499880_77791216 | 77776926 | AAACTCTT others(2): Show |
A | intron_variant | MODIFIER | HG02280.hp2 | a0006 | a0006c0008 | a0006c0008t0003 | a0006c0008t0003g0203 | 1 | 218 | 0.0046 | -9 | c.20+ others(24): Show |
ATRX | ENSG00000085224.23 | transcript | ENST00000373344.11 | protein_coding | 1/34 | chrX | TogoVar | ||||||
ATR_chr3_142444235_142583733 | 142496278 | CTATATAT others(2): Show |
C | intron_variant | MODIFIER | HG00597.hp2 HG00735.hp1 HG00735.hp2 others(20): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0026a0001c0001t0001g0090a0001c0001t0001g0110others(20): Show | 23 | 322 | 0.0714 | -9 | c.589 others(24): Show |
ATR | ENSG00000175054.16 | transcript | ENST00000350721.9 | protein_coding | 34/46 | chr3 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16316865 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00642.hp2 HG02895.hp1 HG02970.hp2 others(2): Show |
a0005a0009 | a0005c0006a0005c0060a0009c0016 | a0005c0006t0003a0005c0006t0006a0005c0060t0006others(1): Show | a0005c0006t0003g0057a0005c0006t0003g0166a0005c0006t0006g0010others(2): Show | 5 | 182 | 0.0275 | -9 | c.191 others(28): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 7/7 | chr6 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16327678 | ATGCTGAT others(2): Show |
A | disruptive_inframe_deletion | MODERATE | HG00408.hp2 HG00438.hp2 HG00597.hp1 others(36): Show |
a0002a0005a0014others(1): Show | a0002c0002a0002c0004a0005c0006others(3): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(16): Show | a0002c0002t0001g0071a0002c0002t0002g0089a0002c0002t0002g0090others(36): Show | 39 | 182 | 0.2143 | -9 | c.624 others(16): Show |
p.Gln others(13): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 7/8 | 1524/10557 | 624/2448 | 208/815 | chr6 | TogoVar | ||
ATXN1_chr6_16294112_16766460 | 16346721 | GCAGCCCT others(2): Show |
G | intron_variant | MODIFIER | HG01884.hp2 HG02257.hp1 HG02615.hp1 others(7): Show |
a0005a0007 | a0005c0006a0005c0060a0007c0009 | a0005c0006t0003a0005c0006t0006a0005c0006t0009others(2): Show | a0005c0006t0003g0006a0005c0006t0003g0051a0005c0006t0003g0057others(7): Show | 10 | 182 | 0.0550 | -9 | c.-16 others(30): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 6/7 | chr6 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16372988 | AGTAGAGA others(2): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00408.hp2 others(85): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0027a0001c0028others(33): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0011others(52): Show | a0001c0001t0001g0043a0001c0001t0001g0045a0001c0001t0001g0083others(85): Show | 88 | 182 | 0.4835 | -9 | c.-16 others(30): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 6/7 | chr6 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16402242 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG01255.hp2 others(5): Show |
a0002a0004a0006others(4): Show | a0002c0002a0004c0015a0006c0008others(4): Show | a0002c0002t0008a0004c0015t0001a0006c0008t0002others(5): Show | a0002c0002t0008g0081a0004c0015t0001g0157a0006c0008t0002g0137others(5): Show | 8 | 182 | 0.0440 | -9 | c.-16 others(30): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 6/7 | chr6 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16480154 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG02132.hp2 others(17): Show |
a0001a0002a0003others(8): Show | a0001c0001a0002c0002a0002c0004others(12): Show | a0001c0001t0001a0002c0002t0002a0002c0004t0001others(12): Show | a0001c0001t0001g0037a0001c0001t0001g0105a0002c0002t0002g0089others(17): Show | 20 | 182 | 0.1099 | -9 | c.-16 others(28): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 6/7 | chr6 | TogoVar | ||||||
ATXN1_chr6_16294112_16766460 | 16714188 | CACACACA others(2): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00609.hp2 others(38): Show |
a0001a0002a0003others(17): Show | a0001c0001a0001c0028a0002c0002others(23): Show | a0001c0001t0001a0001c0001t0029a0001c0001t0044others(27): Show | a0001c0001t0001g0037a0001c0001t0001g0123a0001c0001t0001g0158others(38): Show | 41 | 182 | 0.2253 | -9 | c.-61 others(30): Show |
ATXN1 | ENSG00000124788.19 | transcript | ENST00000436367.6 | protein_coding | 2/7 | chr6 | TogoVar | ||||||
ATXN2L_chr16_28817999_28842232 | 28822934 | GGCCCCCC others(2): Show |
G | upstream_gene_variant | MODIFIER | HG02451.hp1 HG02630.hp2 HG03098.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0003a0001c0001t0001g0053a0001c0002t0001g0007others(1): Show | 6 | 382 | 0.0157 | -9 | c.-32 others(18): Show |
ATXN2L | ENSG00000168488.19 | transcript | ENST00000336783.9 | protein_coding | 64 | chr16 | TogoVar | ||||||
ATXN2_chr12_111447214_111604315 | 111598969 | CTGCTGCT others(2): Show |
C | disruptive_inframe_deletion | MODERATE | HG02257.hp1 HG02896.hp1 HG02897.hp2 |
a0005a0008 | a0005c0009a0008c0023 | a0005c0009t0001a0008c0023t0003 | a0005c0009t0001g0001a0005c0009t0001g0002a0008c0023t0003g0119 | 3 | 298 | 0.0101 | -9 | c.57_ others(14): Show |
p.Gln others(11): Show |
ATXN2 | ENSG00000204842.18 | transcript | ENST00000673436.1 | protein_coding | 1/25 | 346/4347 | 57/3468 | 19/1155 | chr12 | TogoVar | ||
ATXN3_chr14_92053552_92111582 | 92081465 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00423.hp1 others(149): Show |
a0003a0004a0006others(35): Show | a0003c0003a0004c0026a0006c0005others(37): Show | a0003c0003t0001a0003c0003t0002a0003c0003t0004others(88): Show | a0003c0003t0001g0064a0003c0003t0001g0076a0003c0003t0001g0077others(145): Show | 152 | 402 | 0.3781 | -9 | c.776 others(24): Show |
ATXN3 | ENSG00000066427.25 | transcript | ENST00000644486.2 | protein_coding | 8/10 | chr14 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105619530 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG02165.hp1 others(5): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0005a0001c0001t0002g0016a0001c0001t0004g0124others(5): Show | 8 | 252 | 0.0318 | -9 | c.151 others(26): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 9/11 | chr7 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105671104 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00741.hp2 HG01069.hp2 others(61): Show |
a0001a0002a0007 | a0001c0001a0002c0002a0007c0009 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0003a0001c0001t0001g0026a0001c0001t0001g0119others(61): Show | 64 | 252 | 0.2540 | -9 | c.356 others(26): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 3/11 | chr7 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105685044 | GATAATAA others(2): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00558.hp2 HG00642.hp1 others(34): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0078a0001c0001t0001g0085a0001c0001t0001g0106others(34): Show | 37 | 252 | 0.1468 | -9 | c.356 others(28): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 3/11 | chr7 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105724573 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01257.hp2 HG01258.hp1 HG02451.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(5): Show | a0001c0001t0001g0205a0001c0001t0007g0218a0001c0001t0008g0075others(5): Show | 8 | 252 | 0.0318 | -9 | c.356 others(28): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 3/11 | chr7 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105820126 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG00673.hp2 HG01167.hp1 others(26): Show |
a0001a0005 | a0001c0001a0001c0008a0005c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0088a0001c0001t0001g0119a0001c0001t0001g0163others(26): Show | 29 | 252 | 0.1151 | -9 | c.251 others(28): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 2/11 | chr7 | TogoVar | ||||||
ATXN7L1_chr7_105599772_105881599 | 105845562 | ATATGGAA others(2): Show |
A | intron_variant | MODIFIER | HG01891.hp2 HG02630.hp2 HG02896.hp2 |
a0001a0002a0007 | a0001c0001a0002c0002a0007c0009 | a0001c0001t0045a0002c0002t0030a0007c0009t0007 | a0001c0001t0045g0190a0002c0002t0030g0208a0007c0009t0007g0096 | 3 | 252 | 0.0119 | -9 | c.250 others(28): Show |
ATXN7L1 | ENSG00000146776.15 | transcript | ENST00000419735.8 | protein_coding | 2/11 | chr7 | TogoVar | ||||||
ATXN7_chr3_63858867_64008462 | 63863797 | CGCGGCGG others(2): Show |
C | upstream_gene_variant | MODIFIER | HG02602.hp1 HG02895.hp1 HG02897.hp2 others(2): Show |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0001a0001c0001t0012a0004c0006t0004 | a0001c0001t0001g0073a0001c0001t0012g0122a0004c0006t0004g0125others(2): Show | 5 | 300 | 0.0167 | -9 | c.-47 others(18): Show |
ATXN7 | ENSG00000163635.20 | transcript | ENST00000674280.1 | protein_coding | 69 | chr3 | TogoVar | ||||||
ATXN7_chr3_63858867_64008462 | 63863951 | GCGCCGCC others(2): Show |
G | 5_prime_UTR_variant | MODIFIER | HG01175.hp2 HG02258.hp2 HG02723.hp2 others(3): Show |
a0010a0016 | a0010c0011a0016c0017 | a0010c0011t0014a0016c0017t0029 | a0010c0011t0014g0019a0010c0011t0014g0028a0010c0011t0014g0029others(3): Show | 6 | 300 | 0.0200 | -9 | c.-29 others(18): Show |
ATXN7 | ENSG00000163635.20 | transcript | ENST00000674280.1 | protein_coding | 1/13 | 48621 | INFO_REALIGN_3_PRIME | chr3 | TogoVar |