Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNTN1_chr12_40687439_41077415	40799897	TGAGCTTA others(2): Show TGAGCTTAGG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01255.hp2 HG01433.hp2 others(1): Show HG00280.hp2 HG01255.hp2 HG01433.hp2 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0013 a0001c0001t0018 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0018 a0001c0002t0001	a0001c0001t0001g0118 a0001c0001t0013g0133 a0001c0001t0018g0048 others(1): Show a0001c0001t0001g0118 a0001c0001t0013g0133 a0001c0001t0018g0048 a0001c0002t0001g0132	4	230	0.0174	-9	c.-77 others(30): Show c.-77+107306_-77+107314delGAGCTTAGG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40825759	AGTGTCCC others(2): Show AGTGTCCCTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03139.hp1 HG02055.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0054 a0001c0001t0004g0184 a0001c0001t0004g0054 a0001c0001t0004g0184	2	230	0.0087	-9	c.-76 others(28): Show c.-76-82594_-76-82586delTCCCTTGTG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40932957	GCTGTGTT others(2): Show GCTGTGTTGT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01069.hp2 HG01255.hp1 others(3): Show HG00099.hp1 HG01069.hp2 HG01255.hp1 HG02273.hp1 HG03704.hp2 NA21309.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0006 a0001c0006t0006	a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 others(3): Show a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0051 a0001c0006t0006g0119	6	230	0.0261	-9	c.704 others(24): Show c.704-500_704-492delTGTTGTCTG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	7/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41007045	GTTTTTTT others(2): Show GTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01106.hp2 HG01361.hp1 others(4): Show HG00438.hp1 HG01106.hp2 HG01361.hp1 HG02055.hp1 HG02717.hp1 HG03579.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0008 a0001c0002 a0001c0003 a0003c0008	a0001c0002t0003 a0001c0003t0003 a0001c0003t0005 others(3): Show a0001c0002t0003 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0019 a0003c0008t0002	a0001c0002t0003g0060 a0001c0003t0003g0061 a0001c0003t0005g0070 others(4): Show a0001c0002t0003g0060 a0001c0003t0003g0061 a0001c0003t0005g0070 a0001c0003t0005g0155 a0001c0003t0011g0199 a0001c0003t0019g0056 a0003c0008t0002g0143	7	230	0.0304	-9	c.211 others(28): Show c.2114-7159_2114-7151delTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN3_chr3_74257568_74619659	74391557	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG00609.hp1 others(38): Show HG00597.hp1 HG00597.hp2 HG00609.hp1 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01169.hp2 HG01255.hp2 HG01346.hp2 HG01943.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02055.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02647.hp1 HG02965.hp1 HG03017.hp1 HG03017.hp2 HG03139.hp2 HG03209.hp1 HG03579.hp1 HG03710.hp1 NA18906.hp1 NA18945.hp1 NA18951.hp1 NA18956.hp1 NA18961.hp2 NA18981.hp2 NA18998.hp2 NA19000.hp2 NA19030.hp2 NA19068.hp2 NA19091.hp1 NA20752.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0002 a0001c0009 others(5): Show a0001c0001 a0001c0002 a0001c0009 a0001c0010 a0001c0019 a0002c0004 a0002c0005 a0008c0016	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(22): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0009 a0001c0002t0014 a0001c0002t0017 a0001c0002t0020 a0001c0002t0021 a0001c0009t0002 a0001c0009t0004 a0001c0010t0005 a0001c0019t0016 a0002c0004t0001 a0002c0004t0004 a0002c0004t0006 a0002c0004t0028 a0002c0005t0002 a0008c0016t0007	a0001c0001t0001g0112 a0001c0001t0001g0139 a0001c0001t0003g0024 others(38): Show a0001c0001t0001g0112 a0001c0001t0001g0139 a0001c0001t0003g0024 a0001c0001t0003g0049 a0001c0001t0003g0060 a0001c0001t0004g0098 a0001c0001t0008g0001 a0001c0002t0001g0114 a0001c0002t0001g0116 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0056 a0001c0002t0002g0065 a0001c0002t0003g0047 a0001c0002t0003g0058 a0001c0002t0004g0100 a0001c0002t0004g0119 a0001c0002t0004g0123 a0001c0002t0005g0146 a0001c0002t0007g0018 a0001c0002t0009g0085 a0001c0002t0014g0076 a0001c0002t0017g0170 a0001c0002t0020g0007 a0001c0002t0021g0010 a0001c0009t0002g0031 a0001c0009t0004g0103 a0001c0010t0005g0163 a0001c0019t0016g0135 a0002c0004t0001g0089 a0002c0004t0001g0101 a0002c0004t0004g0095 a0002c0004t0004g0130 a0002c0004t0006g0143 a0002c0004t0006g0157 a0002c0004t0006g0165 a0002c0004t0028g0137 a0002c0005t0002g0040 a0008c0016t0007g0080	41	174	0.2356	-9	c.455 others(28): Show c.455-20167_455-20159delAAAAAAAAA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	5/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74529479	ATGTTTTT others(2): Show ATGTTTTTAT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00597.hp1 HG00597.hp2 others(30): Show HG00438.hp2 HG00597.hp1 HG00597.hp2 HG01081.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp1 HG01255.hp1 HG01255.hp2 HG02027.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp2 HG02486.hp1 HG03225.hp2 HG04199.hp1 HG06807.hp1 NA18951.hp2 NA18955.hp1 NA18959.hp2 NA18961.hp1 NA18981.hp2 NA18998.hp2 NA19000.hp1 NA19065.hp2 NA19068.hp1 NA19074.hp2 NA19077.hp1 NA19085.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0006 others(5): Show a0001c0001 a0001c0002 a0001c0006 a0001c0010 a0002c0004 a0002c0005 a0003c0003 a0003c0023	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0027 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0007 a0001c0002t0017 a0001c0006t0006 a0001c0010t0005 a0002c0004t0004 a0002c0004t0006 a0002c0005t0002 a0002c0005t0003 a0002c0005t0005 a0002c0005t0006 a0003c0003t0005 a0003c0023t0016	a0001c0001t0001g0108 a0001c0001t0001g0139 a0001c0001t0002g0062 others(30): Show a0001c0001t0001g0108 a0001c0001t0001g0139 a0001c0001t0002g0062 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0005g0154 a0001c0001t0005g0156 a0001c0001t0006g0149 a0001c0001t0006g0153 a0001c0001t0027g0094 a0001c0002t0002g0015 a0001c0002t0002g0056 a0001c0002t0002g0065 a0001c0002t0003g0063 a0001c0002t0005g0146 a0001c0002t0005g0147 a0001c0002t0005g0152 a0001c0002t0005g0164 a0001c0002t0007g0064 a0001c0002t0017g0170 a0001c0006t0006g0150 a0001c0010t0005g0163 a0002c0004t0004g0088 a0002c0004t0006g0145 a0002c0004t0006g0151 a0002c0004t0006g0157 a0002c0004t0006g0165 a0002c0005t0002g0066 a0002c0005t0003g0059 a0002c0005t0005g0148 a0002c0005t0006g0160 a0003c0003t0005g0161 a0003c0023t0016g0096	33	174	0.1897	-9	c.-80 others(26): Show c.-80-8296_-80-8288delATAAAAACA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/22			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2158088	TTGCATAT others(2): Show TTGCATATAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00735.hp1 HG01256.hp2 others(6): Show HG00140.hp1 HG00735.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG02074.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0004 others(2): Show a0001c0001 a0001c0003 a0001c0004 a0001c0009 a0007c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0003t0003 a0001c0004t0001 a0001c0004t0002 a0001c0009t0004 a0007c0018t0003	a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 others(6): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0003t0003g0046 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0002g0076 a0001c0009t0004g0005 a0007c0018t0003g0062	9	116	0.0776	-9	c.-14 others(30): Show c.-145+57458_-145+57466delCTGCATATA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2178137	TGGTGTTG others(2): Show TGGTGTTGAA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02615.hp1 HG02647.hp2 others(5): Show HG01884.hp2 HG02615.hp1 HG02647.hp2 HG02897.hp2 HG03041.hp1 HG03041.hp2 HG03209.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0006 others(1): Show a0001c0001 a0001c0005 a0001c0006 a0001c0010	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0005t0010 a0001c0006t0004 a0001c0010t0003	a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0001t0004g0042 others(5): Show a0001c0001t0001g0033 a0001c0001t0003g0006 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0009g0052 a0001c0005t0010g0001 a0001c0006t0004g0004 a0001c0010t0003g0011	8	116	0.0690	-9	c.-14 others(30): Show c.-145+77502_-145+77510delGTTGAAGGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287711	GGAAGAAG others(2): Show GGAAGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG06807.hp2 NA19043.hp1 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0003 a0001c0001t0003 a0001c0002t0003	a0001c0001t0003g0095 a0001c0002t0003g0114 a0001c0001t0003g0095 a0001c0002t0003g0114	2	116	0.0172	-9	c.-14 others(30): Show c.-144-51408_-144-51400delAAGAAGAAG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2575809	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00642.hp1 HG00735.hp2 others(12): Show HG00140.hp2 HG00642.hp1 HG00735.hp2 HG01261.hp1 HG02559.hp1 HG02615.hp1 HG02622.hp2 HG02683.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp1 HG03516.hp1 HG03654.hp2 HG03831.hp2 HG06807.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0021 a0003c0008 a0006c0028	a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 others(9): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0004t0002 a0001c0005t0001 a0001c0006t0004 a0001c0009t0014 a0001c0021t0002 a0003c0008t0001 a0006c0028t0001	a0001c0001t0002g0028 a0001c0001t0004g0081 a0001c0002t0001g0088 others(12): Show a0001c0001t0002g0028 a0001c0001t0004g0081 a0001c0002t0001g0088 a0001c0002t0002g0078 a0001c0003t0001g0037 a0001c0003t0001g0094 a0001c0004t0002g0064 a0001c0005t0001g0090 a0001c0005t0001g0096 a0001c0005t0001g0104 a0001c0006t0004g0004 a0001c0009t0014g0039 a0001c0021t0002g0025 a0003c0008t0001g0084 a0006c0028t0001g0023	15	116	0.1293	-9	c.55+ others(24): Show c.55+4271_55+4279delTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2776274	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02572.hp1 others(2): Show HG02451.hp1 HG02559.hp1 HG02572.hp1 HG03471.hp2 HG03516.hp1	a0001 a0009 a0001 a0009	a0001c0002 a0001c0005 a0009c0027 a0001c0002 a0001c0005 a0009c0027	a0001c0002t0001 a0001c0005t0001 a0009c0027t0001 a0001c0002t0001 a0001c0005t0001 a0009c0027t0001	a0001c0002t0001g0021 a0001c0002t0001g0110 a0001c0005t0001g0090 others(2): Show a0001c0002t0001g0021 a0001c0002t0001g0110 a0001c0005t0001g0090 a0001c0005t0001g0104 a0009c0027t0001g0007	5	116	0.0431	-9	c.358 others(28): Show c.358+30588_358+30596delTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2886728	GGTTTCAA others(2): Show GGTTTCAAAC	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG01256.hp2 others(3): Show HG00140.hp1 HG00738.hp1 HG01256.hp2 HG01257.hp2 HG01361.hp2 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 a0001c0002t0004 a0001c0002t0007	a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 others(3): Show a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0005g0098 a0001c0002t0001g0038 a0001c0002t0004g0017 a0001c0002t0007g0112	6	116	0.0517	-9	c.756 others(24): Show c.756-311_756-303delGTTTCAAAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	9/24			chr3	TogoVar
CNTN4_chr3_2093866_3062959	3024384	TAAAAAAA others(2): Show TAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01256.hp1 HG01257.hp2 others(1): Show HG00738.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0054 others(1): Show a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0054 a0001c0001t0005g0098	4	116	0.0345	-9	c.148 others(28): Show c.1487-1702_1487-1694delAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99306746	GATAATAA others(2): Show GATAATAATA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02004.hp1 HG02132.hp1 others(10): Show HG01081.hp1 HG02004.hp1 HG02132.hp1 HG02258.hp2 HG02602.hp1 HG02723.hp1 HG02735.hp2 HG03130.hp1 HG03471.hp1 HG03471.hp2 HG06807.hp2 NA19043.hp2 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0008 a0012	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0008c0008 a0012c0013	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0016 a0002c0002t0008 a0003c0003t0002 a0005c0005t0001 a0005c0005t0003 a0005c0005t0018 a0008c0008t0007 a0012c0013t0008	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0054 others(10): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0054 a0001c0001t0004g0029 a0001c0001t0006g0066 a0001c0001t0016g0049 a0002c0002t0008g0019 a0003c0003t0002g0061 a0005c0005t0001g0035 a0005c0005t0003g0045 a0005c0005t0018g0028 a0008c0008t0007g0038 a0012c0013t0008g0031	13	66	0.1970	-9	c.-20 others(30): Show c.-209-18570_-209-18562delAATAATAAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99368229	AAAATTTA others(2): Show AAAATTTAAT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG01169.hp1 others(12): Show HG00733.hp2 HG00735.hp2 HG01169.hp1 HG01496.hp1 HG02258.hp1 HG02602.hp2 HG02886.hp1 HG02976.hp1 HG03041.hp1 HG03471.hp2 HG06807.hp1 NA18957.hp2 NA19000.hp1 NA19070.hp2 NA20300.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0009 a0010	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0009c0012 a0010c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0011 a0001c0001t0014 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0006c0006t0013 a0006c0006t0014 a0009c0012t0008 a0010c0010t0011	a0001c0001t0001g0053 a0001c0001t0004g0029 a0001c0001t0005g0048 others(12): Show a0001c0001t0001g0053 a0001c0001t0004g0029 a0001c0001t0005g0048 a0001c0001t0009g0043 a0001c0001t0011g0062 a0001c0001t0014g0016 a0002c0002t0021g0055 a0002c0002t0022g0013 a0003c0003t0002g0002 a0003c0003t0002g0027 a0003c0003t0007g0034 a0006c0006t0013g0025 a0006c0006t0014g0058 a0009c0012t0008g0026 a0010c0010t0011g0009	15	66	0.2273	-9	c.-71 others(28): Show c.-71+42746_-71+42754delAAATTTAAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99472375	GCATTTAC others(2): Show GCATTTACTT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02895.hp2 NA18522.hp1 others(2): Show HG02886.hp2 HG02895.hp2 NA18522.hp1 NA18522.hp2 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0005 a0002c0002t0004 a0003c0003t0007 others(2): Show a0001c0001t0005 a0002c0002t0004 a0003c0003t0007 a0004c0004t0013 a0004c0004t0020	a0001c0001t0005g0048 a0002c0002t0004g0007 a0003c0003t0007g0057 others(2): Show a0001c0001t0005g0048 a0002c0002t0004g0007 a0003c0003t0007g0057 a0004c0004t0013g0050 a0004c0004t0020g0024	5	66	0.0758	-9	c.-70 others(28): Show c.-70-83761_-70-83753delTCATTTACT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99543918	CAAAAAAA others(2): Show CAAAAAAACA	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp1 HG01099.hp1 others(7): Show HG00733.hp2 HG00735.hp1 HG01099.hp1 HG02257.hp1 HG02723.hp1 HG02886.hp1 HG03130.hp2 HG03471.hp1 HG06807.hp1 NA19043.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0008 a0011	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0003c0011 a0006c0006 a0008c0008 a0011c0009	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0002c0002t0022 a0003c0003t0002 a0003c0011t0019 a0006c0006t0009 a0006c0006t0013 a0008c0008t0007 a0011c0009t0005	a0001c0001t0001g0008 a0001c0001t0004g0010 a0001c0001t0006g0040 others(7): Show a0001c0001t0001g0008 a0001c0001t0004g0010 a0001c0001t0006g0040 a0002c0002t0022g0013 a0003c0003t0002g0027 a0003c0011t0019g0059 a0006c0006t0009g0042 a0006c0006t0013g0025 a0008c0008t0007g0038 a0011c0009t0005g0056	10	66	0.1515	-9	c.-70 others(28): Show c.-70-12219_-70-12211delCAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100113417	CAAAAAAA others(2): Show CAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp2 HG01081.hp2 others(11): Show HG00733.hp1 HG00733.hp2 HG01081.hp2 HG01123.hp2 HG01169.hp1 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02132.hp2 HG02602.hp1 HG03041.hp2 HG03471.hp1 NA19000.hp1 NA19000.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0008	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0006c0006 a0008c0008	a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 others(6): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0002c0002t0022 a0003c0003t0002 a0004c0004t0002 a0006c0006t0014 a0008c0008t0007	a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 others(11): Show a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0023 a0001c0001t0010g0047 a0001c0001t0012g0018 a0001c0001t0012g0030 a0002c0002t0022g0013 a0003c0003t0002g0011 a0003c0003t0002g0012 a0004c0004t0002g0001 a0004c0004t0002g0051 a0006c0006t0014g0058 a0008c0008t0007g0038	14	66	0.2121	-9	c.158 others(30): Show c.1580+39151_1580+39159delAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1245286	TATATATA others(2): Show TATATATAAC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01167.hp2 HG01169.hp2 others(4): Show HG01109.hp1 HG01167.hp2 HG01169.hp2 HG02055.hp1 HG02258.hp1 HG03710.hp1 NA19043.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0005 a0001c0006 a0001c0007 others(2): Show a0001c0005 a0001c0006 a0001c0007 a0002c0011 a0003c0015	a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 others(2): Show a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0002c0011t0001 a0003c0015t0001	a0001c0005t0001g0157 a0001c0006t0001g0200 a0001c0006t0001g0201 others(4): Show a0001c0005t0001g0157 a0001c0006t0001g0200 a0001c0006t0001g0201 a0001c0007t0001g0102 a0002c0011t0001g0217 a0003c0015t0001g0007 a0003c0015t0001g0008	7	232	0.0302	-9	c.358 others(28): Show c.358+17301_358+17309delACATATATA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1277346	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02055.hp1 HG02109.hp1 others(9): Show HG01167.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp1 HG02922.hp2 HG03130.hp2 NA18522.hp1 NA18522.hp2 NA18954.hp2 NA20300.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0002 a0001c0005 a0001c0006 others(5): Show a0001c0002 a0001c0005 a0001c0006 a0001c0019 a0001c0021 a0001c0025 a0003c0015 a0006c0027	a0001c0002t0001 a0001c0005t0001 a0001c0005t0004 others(6): Show a0001c0002t0001 a0001c0005t0001 a0001c0005t0004 a0001c0006t0001 a0001c0019t0001 a0001c0021t0001 a0001c0025t0001 a0003c0015t0001 a0006c0027t0001	a0001c0002t0001g0063 a0001c0005t0001g0196 a0001c0005t0004g0194 others(9): Show a0001c0002t0001g0063 a0001c0005t0001g0196 a0001c0005t0004g0194 a0001c0006t0001g0201 a0001c0006t0001g0213 a0001c0006t0001g0229 a0001c0019t0001g0202 a0001c0021t0001g0231 a0001c0025t0001g0192 a0003c0015t0001g0007 a0003c0015t0001g0008 a0006c0027t0001g0191	12	232	0.0517	-9	c.359 others(26): Show c.359-1044_359-1036delTTTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1301024	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00423.hp1 HG00423.hp2 others(82): Show HG00140.hp2 HG00423.hp1 HG00423.hp2 HG00609.hp1 HG00639.hp2 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp1 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02074.hp2 HG02165.hp2 HG02280.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02698.hp2 HG02738.hp1 HG02738.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp2 HG04204.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18948.hp1 NA18949.hp2 NA18951.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18961.hp1 NA18961.hp2 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18980.hp1 NA18980.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19009.hp1 NA19009.hp2 NA19030.hp1 NA19084.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009 a0001c0024 a0002c0011 a0002c0014 a0002c0017 a0007c0018	a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 others(17): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0003t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0001 a0001c0007t0001 a0001c0007t0002 a0001c0007t0006 a0001c0008t0001 a0001c0009t0001 a0001c0009t0003 a0001c0024t0001 a0002c0011t0001 a0002c0014t0001 a0002c0017t0001 a0007c0018t0001	a0001c0001t0001g0027 a0001c0001t0001g0046 a0001c0001t0001g0047 others(82): Show a0001c0001t0001g0027 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0057 a0001c0001t0001g0071 a0001c0001t0001g0088 a0001c0001t0001g0097 a0001c0001t0001g0126 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0171 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0094 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0121 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0145 a0001c0002t0001g0147 a0001c0002t0001g0160 a0001c0002t0001g0174 a0001c0002t0001g0176 a0001c0002t0004g0228 a0001c0002t0005g0050 a0001c0002t0007g0059 a0001c0003t0001g0011 a0001c0003t0001g0025 a0001c0003t0001g0026 a0001c0003t0001g0031 a0001c0003t0001g0040 a0001c0003t0001g0076 a0001c0003t0001g0092 a0001c0003t0001g0112 a0001c0003t0001g0142 a0001c0003t0001g0161 a0001c0003t0001g0172 a0001c0003t0001g0224 a0001c0003t0001g0225 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0004t0001g0041 a0001c0004t0001g0055 a0001c0004t0001g0060 a0001c0004t0001g0072 a0001c0004t0001g0080 a0001c0004t0001g0089 a0001c0004t0001g0103 a0001c0004t0001g0128 a0001c0004t0001g0132 a0001c0004t0001g0158 a0001c0005t0001g0113 a0001c0005t0001g0182 a0001c0005t0001g0188 a0001c0005t0001g0196 a0001c0005t0001g0207 a0001c0005t0001g0230 a0001c0006t0001g0028 a0001c0006t0001g0183 a0001c0007t0001g0014 a0001c0007t0001g0015 a0001c0007t0001g0017 a0001c0007t0001g0048 a0001c0007t0001g0052 a0001c0007t0001g0100 a0001c0007t0001g0102 a0001c0007t0001g0146 a0001c0007t0001g0155 a0001c0007t0002g0032 a0001c0007t0006g0170 a0001c0008t0001g0043 a0001c0008t0001g0075 a0001c0008t0001g0087 a0001c0008t0001g0143 a0001c0008t0001g0167 a0001c0009t0001g0150 a0001c0009t0003g0051 a0001c0024t0001g0070 a0002c0011t0001g0006 a0002c0014t0001g0220 a0002c0014t0001g0232 a0002c0017t0001g0179 a0007c0018t0001g0148	85	232	0.3664	-9	c.761 others(26): Show c.761+3055_761+3063delTTTTTTTTT	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTNAP2_chr7_146111801_148425998	146414420	TTGAGAAA others(2): Show TTGAGAAATC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03098.hp2 HG03225.hp1 others(2): Show HG01891.hp2 HG03098.hp2 HG03225.hp1 NA18522.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0001c0010	a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 others(2): Show a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0009t0019 a0001c0010t0002	a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0002t0001g0021 others(2): Show a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0002t0001g0021 a0001c0009t0019g0027 a0001c0010t0002g0014	5	40	0.1250	-9	c.97+ others(28): Show c.97+297451_97+297459delGAAATCTGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146469518	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03098.hp2 HG03225.hp1 others(3): Show HG02451.hp2 HG03098.hp2 HG03225.hp1 NA18522.hp1 NA19030.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0001c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0001c0002t0001 a0001c0009t0019 a0001c0013t0003	a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0018g0001 others(3): Show a0001c0001t0001g0038 a0001c0001t0002g0006 a0001c0001t0018g0001 a0001c0002t0001g0021 a0001c0009t0019g0027 a0001c0013t0003g0039	6	40	0.1500	-9	c.98- others(28): Show c.98-304739_98-304731delTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146486046	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02486.hp1 HG02717.hp2 others(2): Show HG00735.hp2 HG02486.hp1 HG02717.hp2 HG02976.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0001c0019	a0001c0001t0001 a0001c0001t0007 a0001c0003t0020 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0003t0020 a0001c0005t0008 a0001c0019t0006	a0001c0001t0001g0003 a0001c0001t0007g0020 a0001c0003t0020g0017 others(2): Show a0001c0001t0001g0003 a0001c0001t0007g0020 a0001c0003t0020g0017 a0001c0005t0008g0005 a0001c0019t0006g0015	5	40	0.1250	-9	c.98- others(28): Show c.98-288197_98-288189delTTTTTTTTT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146504262	GTATTCCT others(2): Show GTATTCCTGC	G G	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03239.hp1 NA21309.hp2 HG03225.hp2 HG03239.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0018 a0003c0007 a0001c0001 a0001c0018 a0003c0007	a0001c0001t0018 a0001c0018t0002 a0003c0007t0017 a0001c0001t0018 a0001c0018t0002 a0003c0007t0017	a0001c0001t0018g0001 a0001c0018t0002g0012 a0003c0007t0017g0031 a0001c0001t0018g0001 a0001c0018t0002g0012 a0003c0007t0017g0031	3	40	0.0750	-9	c.98- others(28): Show c.98-270005_98-269997delTCCTGCTAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147606923	CACAGAGA others(2): Show CACAGAGAAT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG01891.hp2 others(28): Show HG00735.hp1 HG00735.hp2 HG01891.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp1 NA19030.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(13): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0011 a0001c0012 a0001c0013 a0001c0015 a0001c0018 a0001c0019 a0002c0016 a0002c0017 a0003c0007	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(23): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 a0001c0003t0013 a0001c0003t0020 a0001c0004t0003 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0006t0009 a0001c0006t0014 a0001c0008t0001 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0015t0001 a0001c0018t0002 a0001c0019t0006 a0002c0016t0004 a0002c0017t0015 a0003c0007t0017	a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 others(28): Show a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0002t0002g0040 a0001c0003t0011g0023 a0001c0003t0013g0010 a0001c0003t0020g0017 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0006t0014g0033 a0001c0008t0001g0025 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0015t0001g0011 a0001c0018t0002g0012 a0001c0019t0006g0015 a0002c0016t0004g0024 a0002c0017t0015g0037 a0003c0007t0017g0031	31	40	0.7750	-9	c.189 others(30): Show c.1898-32182_1898-32174delACAGAGAAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23			chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147615227	GCACTCCA others(2): Show GCACTCCAGC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG01891.hp1 others(30): Show HG00735.hp1 HG00735.hp2 HG01891.hp1 HG01891.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 NA18522.hp1 NA18522.hp2 NA19030.hp1 NA19030.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0003 others(15): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0001c0011 a0001c0012 a0001c0013 a0001c0015 a0001c0018 a0001c0019 a0002c0016 a0002c0017 a0003c0007 a0004c0014 a0005c0020	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(25): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0003t0011 a0001c0003t0013 a0001c0003t0020 a0001c0004t0003 a0001c0004t0005 a0001c0005t0008 a0001c0005t0022 a0001c0006t0009 a0001c0006t0014 a0001c0008t0001 a0001c0011t0016 a0001c0012t0004 a0001c0013t0003 a0001c0015t0001 a0001c0018t0002 a0001c0019t0006 a0002c0016t0004 a0002c0017t0015 a0003c0007t0017 a0004c0014t0021 a0005c0020t0005	a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 others(30): Show a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0001t0007g0018 a0001c0001t0007g0020 a0001c0001t0012g0034 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0021 a0001c0002t0002g0013 a0001c0002t0002g0040 a0001c0003t0011g0023 a0001c0003t0013g0010 a0001c0003t0020g0017 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0005t0022g0032 a0001c0006t0009g0028 a0001c0006t0014g0033 a0001c0008t0001g0025 a0001c0011t0016g0019 a0001c0012t0004g0026 a0001c0013t0003g0039 a0001c0015t0001g0011 a0001c0018t0002g0012 a0001c0019t0006g0015 a0002c0016t0004g0024 a0002c0017t0015g0037 a0003c0007t0017g0031 a0004c0014t0021g0022 a0005c0020t0005g0016	33	40	0.8250	-9	c.189 others(30): Show c.1898-23869_1898-23861delCACTCCAGC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	12/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147772478	ATATATAC others(2): Show ATATATACAC	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02922.hp2 HG03540.hp1 HG02717.hp2 HG02922.hp2 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0005 a0001c0002 a0001c0004 a0001c0005	a0001c0002t0010 a0001c0004t0005 a0001c0005t0008 a0001c0002t0010 a0001c0004t0005 a0001c0005t0008	a0001c0002t0010g0002 a0001c0004t0005g0004 a0001c0005t0008g0005 a0001c0002t0010g0002 a0001c0004t0005g0004 a0001c0005t0008g0005	3	40	0.0750	-9	c.209 others(32): Show c.2099-131086_2099-131078delTATATACAC	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	13/23			chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148413402	ATATATAT others(2): Show ATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02486.hp1 HG02451.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0007 a0001c0002t0001 a0001c0001t0007 a0001c0002t0001	a0001c0001t0007g0020 a0001c0002t0001g0007 a0001c0001t0007g0020 a0001c0002t0001g0007	2	40	0.0500	-9	c.379 others(28): Show c.3797-2014_3797-2006delTATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	23/23			chr7	TogoVar
CNTNAP3B_chr9_41885536_42134426	41904311	GTTTTTTT others(2): Show GTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01081.hp2 HG01106.hp1 others(11): Show HG00280.hp1 HG01081.hp2 HG01106.hp1 HG01255.hp1 HG01516.hp2 HG02040.hp1 HG02040.hp2 HG02273.hp2 HG02717.hp1 HG03453.hp2 HG03490.hp2 HG03669.hp2 HG03704.hp2 NA20905.hp2	a0001 a0006 a0010 others(2): Show a0001 a0006 a0010 a0029 a0034	a0001c0001 a0001c0042 a0006c0007 others(4): Show a0001c0001 a0001c0042 a0006c0007 a0006c0041 a0010c0013 a0029c0045 a0034c0038	a0001c0001t0002 a0001c0001t0003 a0001c0042t0013 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0042t0013 a0006c0007t0011 a0006c0041t0002 a0010c0013t0003 a0029c0045t0002 a0034c0038t0002	a0001c0001t0002g0006 a0001c0001t0003g0093 a0001c0001t0003g0095 others(11): Show a0001c0001t0002g0006 a0001c0001t0003g0093 a0001c0001t0003g0095 a0001c0001t0003g0096 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0042t0013g0001 a0006c0007t0011g0021 a0006c0041t0002g0020 a0010c0013t0003g0103 a0029c0045t0002g0019 a0034c0038t0002g0016	14	108	0.1296	-9	c.344 others(28): Show c.3442+1548_3442+1556delAAAAAAAAA	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	21/23			chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	41950747	CTTTTTTT others(2): Show CTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00558.hp1 others(28): Show HG00099.hp2 HG00280.hp1 HG00558.hp1 HG00642.hp2 HG01071.hp2 HG01081.hp2 HG01106.hp1 HG01175.hp1 HG01516.hp2 HG01952.hp2 HG01981.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02135.hp1 HG02145.hp2 HG02273.hp2 HG02486.hp2 HG02717.hp1 HG03239.hp1 HG03453.hp2 HG03490.hp2 HG03669.hp2 HG03704.hp2 HG03831.hp2 HG04115.hp1 NA18947.hp1 NA18947.hp2 NA18968.hp1 NA19090.hp1 NA20905.hp2	a0001 a0006 a0010 others(2): Show a0001 a0006 a0010 a0013 a0034	a0001c0001 a0001c0012 a0001c0042 others(7): Show a0001c0001 a0001c0012 a0001c0042 a0001c0043 a0001c0046 a0006c0007 a0006c0041 a0010c0013 a0013c0021 a0034c0038	a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 others(12): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0017 a0001c0001t0018 a0001c0001t0031 a0001c0012t0002 a0001c0042t0013 a0001c0043t0015 a0001c0046t0016 a0006c0007t0002 a0006c0007t0011 a0006c0041t0002 a0010c0013t0003 a0013c0021t0027 a0034c0038t0002	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0005 others(28): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0011 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0003g0093 a0001c0001t0003g0095 a0001c0001t0003g0096 a0001c0001t0003g0097 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0104 a0001c0001t0017g0012 a0001c0001t0018g0026 a0001c0001t0031g0098 a0001c0012t0002g0007 a0001c0042t0013g0001 a0001c0043t0015g0013 a0001c0046t0016g0015 a0006c0007t0002g0014 a0006c0007t0011g0017 a0006c0007t0011g0021 a0006c0041t0002g0020 a0010c0013t0003g0103 a0010c0013t0003g0108 a0013c0021t0027g0064 a0034c0038t0002g0016	31	108	0.2870	-9	c.208 others(28): Show c.2080+2427_2080+2435delAAAAAAAAA	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	13/23			chr9	TogoVar
CNTNAP3B_chr9_41885536_42134426	42056326	TTTATTAT others(2): Show TTTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG04115.hp1 HG01081.hp2 HG04115.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0021 a0001c0001 a0013c0021	a0001c0001t0002 a0013c0021t0027 a0001c0001t0002 a0013c0021t0027	a0001c0001t0002g0006 a0013c0021t0027g0064 a0001c0001t0002g0006 a0013c0021t0027g0064	2	108	0.0185	-9	c.390 others(28): Show c.390+20534_390+20542delTAATAATAA	CNTNAP3B	ENSG00000154529.15	transcript	ENST00000377561.7	protein_coding	3/23			chr9	TogoVar
CNTNAP4_chr16_76272401_76565757	76274705	TTTTGTTT others(2): Show TTTTGTTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02257.hp2 HG03130.hp1 others(3): Show HG02145.hp1 HG02257.hp2 HG03130.hp1 HG03209.hp1 HG03516.hp1 NA19240.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0003c0006	a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 others(3): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0002c0002t0004 a0003c0003t0011 a0003c0006t0006	a0001c0001t0004g0191 a0001c0001t0005g0046 a0001c0001t0006g0052 others(3): Show a0001c0001t0004g0191 a0001c0001t0005g0046 a0001c0001t0006g0052 a0002c0002t0004g0207 a0003c0003t0011g0246 a0003c0006t0006g0205	6	274	0.0219	-9	c.-29 others(20): Show c.-2957_-2949delTTTGTTTTG	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding		2695		chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76457882	AATTGAAC others(2): Show AATTGAACCC	A A	intron_variant intron_variant	MODIFIER	HG02886.hp2 NA19240.hp2 HG02886.hp2 NA19240.hp2	a0002 a0002	a0002c0012 a0002c0042 a0002c0012 a0002c0042	a0002c0012t0008 a0002c0042t0008 a0002c0012t0008 a0002c0042t0008	a0002c0012t0008g0242 a0002c0042t0008g0036 a0002c0012t0008g0242 a0002c0042t0008g0036	2	274	0.0073	-9	c.133 others(28): Show c.1334-4070_1334-4062delGAACCCATT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	8/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76506420	CTTCCTCC others(2): Show CTTCCTCCCT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp2 HG02257.hp2 others(25): Show HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03098.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp2 NA20752.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0009 a0013 a0018	a0001c0001 a0002c0002 a0002c0012 others(8): Show a0001c0001 a0002c0002 a0002c0012 a0002c0014 a0002c0042 a0003c0006 a0004c0007 a0006c0009 a0009c0044 a0013c0033 a0018c0029	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(19): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0015 a0002c0002t0002 a0002c0002t0004 a0002c0002t0023 a0002c0002t0024 a0002c0002t0025 a0002c0012t0002 a0002c0012t0008 a0002c0014t0006 a0002c0014t0013 a0002c0042t0008 a0003c0006t0021 a0004c0007t0002 a0006c0009t0001 a0006c0009t0004 a0009c0044t0006 a0013c0033t0002 a0018c0029t0005	a0001c0001t0001g0140 a0001c0001t0004g0053 a0001c0001t0004g0172 others(25): Show a0001c0001t0001g0140 a0001c0001t0004g0053 a0001c0001t0004g0172 a0001c0001t0004g0191 a0001c0001t0007g0003 a0001c0001t0010g0240 a0001c0001t0015g0099 a0001c0001t0015g0272 a0002c0002t0002g0212 a0002c0002t0004g0146 a0002c0002t0023g0265 a0002c0002t0024g0049 a0002c0002t0025g0203 a0002c0012t0002g0048 a0002c0012t0008g0090 a0002c0012t0008g0242 a0002c0014t0006g0269 a0002c0014t0013g0054 a0002c0014t0013g0263 a0002c0042t0008g0036 a0003c0006t0021g0001 a0004c0007t0002g0208 a0006c0009t0001g0251 a0006c0009t0001g0258 a0006c0009t0004g0273 a0009c0044t0006g0247 a0013c0033t0002g0050 a0018c0029t0005g0077	28	274	0.1022	-9	c.236 others(28): Show c.2365+7728_2365+7736delTCCTCCCTT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76522651	TCTCTTTC others(2): Show TCTCTTTCTC	T T	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01884.hp1 HG02615.hp1 HG01346.hp1 HG01884.hp1 HG02615.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0001c0001t0006 a0003c0003t0027 a0001c0001t0003 a0001c0001t0006 a0003c0003t0027	a0001c0001t0003g0028 a0001c0001t0006g0161 a0003c0003t0027g0237 a0001c0001t0003g0028 a0001c0001t0006g0161 a0003c0003t0027g0237	3	274	0.0110	-9	c.275 others(26): Show c.2755+395_2755+403delCTCTTTCTC	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	17/23			chr16	TogoVar
CNTNAP4_chr16_76272401_76565757	76522686	CCTTTCTT others(2): Show CCTTTCTTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03239.hp1 HG03669.hp1 HG02280.hp1 HG03239.hp1 HG03669.hp1	a0002 a0014 a0002 a0014	a0002c0002 a0014c0031 a0002c0002 a0014c0031	a0002c0002t0002 a0002c0002t0010 a0014c0031t0002 a0002c0002t0002 a0002c0002t0010 a0014c0031t0002	a0002c0002t0002g0012 a0002c0002t0010g0204 a0014c0031t0002g0057 a0002c0002t0002g0012 a0002c0002t0010g0204 a0014c0031t0002g0057	3	274	0.0110	-9	c.275 others(26): Show c.2755+434_2755+442delCTTTTCTTT	CNTNAP4	ENSG00000152910.19	transcript	ENST00000611870.5	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CNTNAP5_chr2_124020287_124926219	124035006	CCCCTCCC others(2): Show CCCCTCCCCT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02886.hp1 HG03098.hp2 others(2): Show HG01069.hp1 HG02886.hp1 HG03098.hp2 HG03453.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0002t0003 a0001c0001t0003 a0001c0002t0001 a0001c0002t0003	a0001c0001t0003g0006 a0001c0002t0001g0003 a0001c0002t0001g0005 others(2): Show a0001c0001t0003g0006 a0001c0002t0001g0003 a0001c0002t0001g0005 a0001c0002t0001g0007 a0001c0002t0003g0004	5	64	0.0781	-9	c.82+ others(24): Show c.82+9282_82+9290delCTCCCTCCC	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124297810	TTTATTAT others(2): Show TTTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02970.hp1 HG03139.hp2 others(3): Show HG02451.hp1 HG02970.hp1 HG03139.hp2 NA19000.hp2 NA19043.hp1 NA19240.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 others(3): Show a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0011 a0004c0006t0001	a0001c0001t0009g0061 a0001c0002t0001g0064 a0001c0002t0002g0060 others(3): Show a0001c0001t0009g0061 a0001c0002t0001g0064 a0001c0002t0002g0060 a0001c0002t0004g0044 a0001c0002t0011g0029 a0004c0006t0001g0013	6	64	0.0938	-9	c.381 others(28): Show c.381+55459_381+55467delATTATTATT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124392703	AAAAAAAA others(2): Show AAAAAAAAGG	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01891.hp1 HG02723.hp2 others(6): Show HG01261.hp2 HG01891.hp1 HG02723.hp2 HG02886.hp1 HG02922.hp2 HG03130.hp2 HG03139.hp2 NA19043.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0014 a0001c0001t0017 a0001c0002t0007 a0001c0002t0011	a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0003g0006 others(6): Show a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0003g0006 a0001c0001t0004g0052 a0001c0001t0009g0061 a0001c0001t0014g0037 a0001c0001t0017g0012 a0001c0002t0007g0009 a0001c0002t0011g0029	9	64	0.1406	-9	c.382 others(28): Show c.382-24735_382-24727delAAAGGAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124707140	GGAAGAAG others(2): Show GGAAGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG01070.hp1 homoSapiens_chm13v2.hp1 HG01070.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0043 a0001c0001t0002g0042 a0001c0001t0001g0043 a0001c0001t0002g0042	2	64	0.0313	-9	c.207 others(30): Show c.2078-40031_2078-40023delGAAGAAGAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124725595	TTTTGGCA others(2): Show TTTTGGCACA	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02257.hp2 HG03139.hp1 HG01891.hp1 HG02257.hp2 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0001t0017 a0001c0002t0005 a0001c0001t0005 a0001c0001t0017 a0001c0002t0005	a0001c0001t0005g0040 a0001c0001t0017g0012 a0001c0002t0005g0045 a0001c0001t0005g0040 a0001c0001t0017g0012 a0001c0002t0005g0045	3	64	0.0469	-9	c.207 others(30): Show c.2078-21630_2078-21622delGGCACATTT	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	13/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNTNAP5_chr2_124020287_124926219	124828735	CAAAAAAA others(2): Show CAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02723.hp1 HG02886.hp1 others(4): Show HG01891.hp2 HG02723.hp1 HG02886.hp1 HG03139.hp2 HG03453.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0002t0001 a0001c0002t0003	a0001c0001t0001g0011 a0001c0001t0001g0043 a0001c0001t0003g0006 others(4): Show a0001c0001t0001g0011 a0001c0001t0001g0043 a0001c0001t0003g0006 a0001c0001t0009g0061 a0001c0002t0001g0059 a0001c0002t0003g0004 a0001c0002t0003g0056	7	64	0.1094	-9	c.321 others(30): Show c.3217+30444_3217+30452delAAAAAAAAA	CNTNAP5	ENSG00000155052.15	transcript	ENST00000682447.1	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr2	TogoVar
COA1_chr7_43634257_43734523	43644715	TAGATAGA others(2): Show TAGATAGATA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02280.hp2 HG02717.hp1 others(2): Show HG02109.hp2 HG02280.hp2 HG02717.hp1 HG03453.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0155 a0001c0001t0001g0158 others(2): Show a0001c0001t0001g0044 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160	5	384	0.0130	-9	c.264 others(24): Show c.264+527_264+535delTATCTATCT	COA1	ENSG00000106603.20	transcript	ENST00000223336.11	protein_coding	4/5			chr7	TogoVar
COA1_chr7_43634257_43734523	43691407	GGAAGGAA others(2): Show GGAAGGAAGA	G G	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01891.hp2 HG02027.hp1 others(4): Show HG01074.hp1 HG01891.hp2 HG02027.hp1 HG04204.hp2 NA18955.hp2 NA18980.hp2 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0197 a0001c0001t0001g0201 others(4): Show a0001c0001t0001g0193 a0001c0001t0001g0197 a0001c0001t0001g0201 a0001c0001t0001g0211 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0230	7	384	0.0182	-9	c.-39 others(28): Show c.-39+38013_-39+38021delTCTTCCTTC	COA1	ENSG00000106603.20	transcript	ENST00000223336.11	protein_coding	1/5			chr7	TogoVar
COA5_chr2_98594314_98613512	98606768	ACGTCTGG others(2): Show ACGTCTGGAT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 NA18941.hp2 NA18944.hp1 others(5): Show HG00558.hp1 NA18941.hp2 NA18944.hp1 NA18950.hp2 NA18973.hp1 NA18986.hp2 NA19010.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0006 a0001c0001t0003g0029 a0001c0001t0003g0059 a0001c0001t0003g0006 a0001c0001t0003g0029 a0001c0001t0003g0059	8	420	0.0191	-9	c.99+ others(24): Show c.99+1530_99+1538delATCCAGACG	COA5	ENSG00000183513.9	transcript	ENST00000328709.8	protein_coding	1/2			chr2	TogoVar
COBLL1_chr2_164675188_164846823	164822734	ATATTATT others(2): Show ATATTATTAT	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02622.hp1 HG02622.hp2 others(3): Show HG02257.hp2 HG02622.hp1 HG02622.hp2 HG03209.hp2 HG03486.hp2 HG03704.hp2	a0001 a0004 a0009 others(1): Show a0001 a0004 a0009 a0019	a0001c0001 a0001c0002 a0004c0005 others(2): Show a0001c0001 a0001c0002 a0004c0005 a0009c0034 a0019c0014	a0001c0001t0001 a0001c0002t0051 a0004c0005t0015 others(2): Show a0001c0001t0001 a0001c0002t0051 a0004c0005t0015 a0009c0034t0032 a0019c0014t0059	a0001c0001t0001g0047 a0001c0001t0001g0095 a0001c0002t0051g0003 others(3): Show a0001c0001t0001g0047 a0001c0001t0001g0095 a0001c0002t0051g0003 a0004c0005t0015g0110 a0009c0034t0032g0024 a0019c0014t0059g0114	6	212	0.0283	-9	c.41+ others(26): Show c.41+18413_41+18421delATAATAATA	COBLL1	ENSG00000082438.18	transcript	ENST00000652658.2	protein_coding	2/13			chr2	TogoVar
COBL_chr7_51011212_51321809	51058554	AAACAACA others(2): Show AAACAACAAC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(106): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00597.hp2 HG00639.hp2 HG00733.hp2 HG00735.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01109.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01433.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp2 HG01975.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03669.hp2 HG03710.hp2 HG03831.hp1 HG04199.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18951.hp1 NA18960.hp1 NA18960.hp2 NA18963.hp1 NA18971.hp1 NA18971.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18988.hp1 NA18988.hp2 NA18995.hp2 NA19002.hp2 NA19007.hp1 NA19043.hp1 NA19043.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19068.hp2 NA19087.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(10): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0010 a0015 a0020 a0021 a0023 a0024	a0001c0004 a0002c0003 a0002c0007 others(30): Show a0001c0004 a0002c0003 a0002c0007 a0002c0019 a0002c0026 a0002c0028 a0002c0049 a0002c0050 a0002c0065 a0003c0016 a0004c0009 a0004c0010 a0004c0025 a0004c0037 a0004c0046 a0004c0063 a0005c0005 a0005c0006 a0006c0008 a0006c0029 a0006c0032 a0006c0062 a0007c0018 a0007c0020 a0007c0052 a0010c0030 a0010c0034 a0010c0064 a0015c0027 a0020c0054 a0021c0048 a0023c0033 a0024c0066	a0001c0004t0001 a0002c0003t0001 a0002c0003t0002 others(45): Show a0001c0004t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0007t0001 a0002c0019t0001 a0002c0019t0002 a0002c0026t0001 a0002c0028t0001 a0002c0049t0001 a0002c0050t0002 a0002c0065t0001 a0003c0016t0001 a0004c0009t0001 a0004c0009t0002 a0004c0009t0005 a0004c0010t0001 a0004c0010t0002 a0004c0010t0005 a0004c0010t0007 a0004c0010t0012 a0004c0025t0002 a0004c0037t0001 a0004c0046t0001 a0004c0063t0001 a0005c0005t0001 a0005c0005t0003 a0005c0006t0002 a0005c0006t0003 a0006c0008t0002 a0006c0008t0004 a0006c0029t0003 a0006c0032t0004 a0006c0062t0004 a0007c0018t0001 a0007c0018t0003 a0007c0020t0001 a0007c0020t0003 a0007c0052t0001 a0010c0030t0001 a0010c0030t0005 a0010c0034t0005 a0010c0064t0011 a0015c0027t0009 a0020c0054t0004 a0021c0048t0001 a0023c0033t0001 a0024c0066t0003	a0001c0004t0001g0078 a0001c0004t0001g0183 a0001c0004t0001g0219 others(106): Show a0001c0004t0001g0078 a0001c0004t0001g0183 a0001c0004t0001g0219 a0002c0003t0001g0001 a0002c0003t0001g0002 a0002c0003t0001g0004 a0002c0003t0001g0008 a0002c0003t0001g0023 a0002c0003t0001g0047 a0002c0003t0001g0067 a0002c0003t0001g0083 a0002c0003t0001g0088 a0002c0003t0001g0091 a0002c0003t0001g0092 a0002c0003t0001g0098 a0002c0003t0001g0100 a0002c0003t0001g0111 a0002c0003t0001g0112 a0002c0003t0001g0124 a0002c0003t0001g0157 a0002c0003t0001g0190 a0002c0003t0001g0192 a0002c0003t0002g0226 a0002c0003t0003g0093 a0002c0003t0003g0094 a0002c0003t0003g0097 a0002c0007t0001g0107 a0002c0007t0001g0172 a0002c0007t0001g0174 a0002c0007t0001g0176 a0002c0007t0001g0177 a0002c0007t0001g0178 a0002c0007t0001g0179 a0002c0019t0001g0031 a0002c0019t0001g0032 a0002c0019t0002g0120 a0002c0026t0001g0209 a0002c0026t0001g0211 a0002c0028t0001g0007 a0002c0028t0001g0128 a0002c0049t0001g0046 a0002c0050t0002g0116 a0002c0065t0001g0059 a0003c0016t0001g0076 a0003c0016t0001g0077 a0003c0016t0001g0079 a0003c0016t0001g0080 a0004c0009t0001g0005 a0004c0009t0001g0014 a0004c0009t0001g0017 a0004c0009t0001g0055 a0004c0009t0002g0057 a0004c0009t0002g0074 a0004c0009t0005g0222 a0004c0010t0001g0089 a0004c0010t0001g0129 a0004c0010t0002g0073 a0004c0010t0005g0164 a0004c0010t0007g0011 a0004c0010t0012g0115 a0004c0025t0002g0096 a0004c0037t0001g0175 a0004c0046t0001g0048 a0004c0063t0001g0020 a0005c0005t0001g0084 a0005c0005t0001g0085 a0005c0005t0003g0087 a0005c0005t0003g0101 a0005c0005t0003g0117 a0005c0005t0003g0134 a0005c0005t0003g0150 a0005c0005t0003g0161 a0005c0005t0003g0204 a0005c0006t0002g0040 a0005c0006t0003g0035 a0005c0006t0003g0036 a0005c0006t0003g0038 a0005c0006t0003g0050 a0005c0006t0003g0121 a0005c0006t0003g0184 a0005c0006t0003g0196 a0006c0008t0002g0163 a0006c0008t0004g0102 a0006c0008t0004g0103 a0006c0008t0004g0104 a0006c0008t0004g0105 a0006c0008t0004g0106 a0006c0008t0004g0108 a0006c0029t0003g0053 a0006c0029t0003g0170 a0006c0032t0004g0065 a0006c0062t0004g0006 a0007c0018t0001g0185 a0007c0018t0003g0144 a0007c0018t0003g0171 a0007c0020t0001g0168 a0007c0020t0003g0033 a0007c0020t0003g0223 a0007c0052t0001g0072 a0010c0030t0001g0114 a0010c0030t0005g0052 a0010c0034t0005g0182 a0010c0064t0011g0062 a0015c0027t0009g0075 a0015c0027t0009g0165 a0020c0054t0004g0180 a0021c0048t0001g0086 a0023c0033t0001g0064 a0024c0066t0003g0051	109	230	0.4739	-9	c.109 others(30): Show c.1097-14871_1097-14863delGTTGTTGTT	COBL	ENSG00000106078.19	transcript	ENST00000265136.12	protein_coding	7/12			chr7	TogoVar
COBL_chr7_51011212_51321809	51086358	GAAAAAAA others(2): Show GAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01258.hp2 HG01261.hp2 others(6): Show HG00099.hp1 HG01258.hp2 HG01261.hp2 HG01517.hp1 HG02055.hp1 HG02630.hp2 HG02723.hp2 HG02922.hp2 HG03453.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0020	a0001c0004 a0001c0015 a0002c0003 others(3): Show a0001c0004 a0001c0015 a0002c0003 a0003c0001 a0003c0011 a0020c0054	a0001c0004t0001 a0001c0015t0001 a0002c0003t0001 others(3): Show a0001c0004t0001 a0001c0015t0001 a0002c0003t0001 a0003c0001t0001 a0003c0011t0001 a0020c0054t0004	a0001c0004t0001g0010 a0001c0015t0001g0181 a0002c0003t0001g0001 others(6): Show a0001c0004t0001g0010 a0001c0015t0001g0181 a0002c0003t0001g0001 a0002c0003t0001g0002 a0003c0001t0001g0025 a0003c0001t0001g0113 a0003c0001t0001g0210 a0003c0011t0001g0049 a0020c0054t0004g0180	9	230	0.0391	-9	c.958 others(26): Show c.958-1063_958-1055delTTTTTTTTT	COBL	ENSG00000106078.19	transcript	ENST00000265136.12	protein_coding	6/12			chr7	TogoVar
COG2_chr1_230637481_230698982	230681983	TTATCATA others(2): Show TTATCATAAA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03225.hp1 NA20129.hp1 HG02109.hp2 HG03225.hp1 NA20129.hp1	a0001 a0003 a0011 a0001 a0003 a0011	a0001c0010 a0003c0004 a0011c0027 a0001c0010 a0003c0004 a0011c0027	a0001c0010t0001 a0003c0004t0001 a0011c0027t0001 a0001c0010t0001 a0003c0004t0001 a0011c0027t0001	a0001c0010t0001g0278 a0003c0004t0001g0129 a0011c0027t0001g0241 a0001c0010t0001g0278 a0003c0004t0001g0129 a0011c0027t0001g0241	3	406	0.0074	-9	c.116 others(28): Show c.1167-1587_1167-1579delCATAAATAT	COG2	ENSG00000135775.14	transcript	ENST00000366669.9	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr1	TogoVar

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