regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GNPDA1_chr5_141995671_142018027 | 141996751 | CAAAAAAA others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00741.hp2 HG01099.hp2 others(20): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0006a0001c0001t0010others(4): Show | a0001c0001t0004g0098a0001c0001t0004g0110a0001c0001t0004g0121others(19): Show | 23 | 423 | 0.0544 | -9 | c.*52 others(20): Show |
GNPDA1 | ENSG00000113552.16 | transcript | ENST00000311337.11 | protein_coding | 3919 | chr5 | TogoVar | ||||||
GNPNAT1_chr14_52770193_52796607 | 52793780 | CTTTTTTT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00639.hp1 HG00673.hp2 HG01074.hp2 others(45): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0003a0001c0001t0003g0005a0001c0001t0003g0011others(16): Show | 48 | 390 | 0.1231 | -9 | c.-23 others(20): Show |
GNPNAT1 | ENSG00000100522.10 | transcript | ENST00000216410.8 | protein_coding | 2174 | chr14 | TogoVar | ||||||
GNPTAB_chr12_101740499_101835959 | 101801539 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02257.hp2 HG02280.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0361a0001c0001t0001g0362others(12): Show | 18 | 392 | 0.0459 | -9 | c.118 others(26): Show |
GNPTAB | ENSG00000111670.16 | transcript | ENST00000299314.12 | protein_coding | 1/20 | chr12 | TogoVar | ||||||
GNRH1_chr8_25414258_25429261 | 25427382 | TAATTTAC others(2): Show |
T | upstream_gene_variant | MODIFIER | NA18946.hp2 NA18956.hp2 NA18980.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 8 | 398 | 0.0201 | -9 | c.-31 others(20): Show |
GNRH1 | ENSG00000147437.10 | transcript | ENST00000421054.7 | protein_coding | 3122 | chr8 | TogoVar | ||||||
GOLGA3_chr12_132763914_132833869 | 132787613 | AGACCCCG others(2): Show |
A | intron_variant | MODIFIER | HG02080.hp2 HG02698.hp2 NA19088.hp1 |
a0001a0024 | a0001c0003a0024c0038 | a0001c0003t0004a0001c0003t0011a0024c0038t0004 | a0001c0003t0004g0145a0001c0003t0011g0161a0024c0038t0004g0163 | 3 | 308 | 0.0097 | -9 | c.281 others(26): Show |
GOLGA3 | ENSG00000090615.16 | transcript | ENST00000450791.8 | protein_coding | 13/23 | chr12 | TogoVar | ||||||
GOLGA4_chr3_37238271_37371879 | 37270953 | CTGAGGGT others(2): Show |
C | intron_variant | MODIFIER | NA18952.hp1 NA18986.hp1 NA19012.hp1 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0241a0002c0002t0002g0242a0002c0002t0002g0243 | 3 | 272 | 0.0110 | -9 | c.163 others(28): Show |
GOLGA4 | ENSG00000144674.19 | transcript | ENST00000361924.7 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
GOLGA4_chr3_37238271_37371879 | 37286134 | CTTTCTTT others(2): Show |
C | intron_variant | MODIFIER | HG02257.hp2 HG02809.hp2 HG02922.hp1 others(5): Show |
a0002a0005 | a0002c0002a0005c0004 | a0002c0002t0002a0005c0004t0002 | a0002c0002t0002g0261a0002c0002t0002g0263a0002c0002t0002g0264others(5): Show | 8 | 272 | 0.0294 | -9 | c.525 others(22): Show |
GOLGA4 | ENSG00000144674.19 | transcript | ENST00000361924.7 | protein_coding | 4/23 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
GOLGA6L10_chr15_82334993_82354475 | 82353468 | CCTTTTTT others(2): Show |
C | upstream_gene_variant | MODIFIER | HG00639.hp2 HG00735.hp1 HG01361.hp2 others(12): Show |
a0002a0003a0007others(6): Show | a0002c0002a0003c0003a0007c0008others(7): Show | a0002c0002t0001a0003c0003t0002a0007c0008t0007others(7): Show | a0002c0002t0001g0057a0003c0003t0002g0001a0007c0008t0007g0010others(7): Show | 15 | 301 | 0.0498 | -9 | c.-41 others(20): Show |
GOLGA6L10 | ENSG00000278662.6 | transcript | ENST00000610657.2 | protein_coding | 3994 | chr15 | TogoVar | ||||||
GOLGA6L26_chr15_23319535_23339196 | 23328967 | CAGTAGAG others(2): Show |
C | intron_variant | MODIFIER | HG02004.hp1 NA19067.hp1 |
a0035a0053 | a0035c0038a0053c0058 | a0035c0038t0005a0053c0058t0005 | a0035c0038t0005g0049a0053c0058t0005g0117 | 2 | 182 | 0.0110 | -9 | c.561 others(22): Show |
GOLGA6L26 | ENSG00000273756.5 | transcript | ENST00000618455.5 | protein_coding | 6/8 | chr15 | TogoVar | ||||||
GOLGA6L6_chr15_20526856_20546800 | 20545183 | TTTTATCT others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG00609.hp1 others(106): Show |
a0001a0002a0004others(16): Show | a0001c0001a0001c0005a0001c0019others(25): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0014others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0014others(55): Show | 109 | 214 | 0.5094 | -9 | c.-34 others(20): Show |
GOLGA6L6 | ENSG00000277322.1 | transcript | ENST00000619213.1 | protein_coding | 3384 | chr15 | TogoVar | ||||||
GOLGA6L7_chr15_28836832_28853644 | 28842915 | TCTGCTCC others(2): Show |
T | conservative_inframe_deletion | MODERATE | HG02109.hp1 HG02486.hp2 HG02622.hp1 others(4): Show |
a0020a0033a0036others(3): Show | a0020c0016a0033c0046a0036c0042others(3): Show | a0020c0016t0002a0033c0046t0002a0036c0042t0002others(3): Show | a0020c0016t0002g0069a0020c0016t0002g0070a0033c0046t0002g0145others(4): Show | 7 | 422 | 0.0166 | -9 | c.118 others(18): Show |
p.Glu others(13): Show |
GOLGA6L7 | ENSG00000261649.7 | transcript | ENST00000567390.7 | protein_coding | 9/9 | 1283/2367 | 1180/1869 | 394/622 | chr15 | TogoVar | ||
GOLGA7_chr8_41485582_41515980 | 41504120 | TAAAAAAA others(2): Show |
T | intron_variant | MODIFIER | HG01099.hp2 HG01257.hp2 HG01258.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0022 | a0001c0001t0005g0004a0001c0001t0005g0042a0001c0001t0005g0043others(3): Show | 19 | 350 | 0.0543 | -9 | c.265 others(26): Show |
GOLGA7 | ENSG00000147533.19 | transcript | ENST00000357743.9 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
GOLGA8H_chr15_30599028_30622752 | 30618764 | CTTTTTTT others(2): Show |
C | downstream_gene_variant | MODIFIER | HG01346.hp2 HG01884.hp1 HG01891.hp1 others(6): Show |
a0007a0040 | a0007c0007a0040c0023 | a0007c0007t0007a0007c0007t0036a0040c0023t0007 | a0007c0007t0007g0006a0007c0007t0007g0090a0007c0007t0007g0091others(4): Show | 9 | 387 | 0.0233 | -9 | c.*42 others(20): Show |
GOLGA8H | ENSG00000261794.2 | transcript | ENST00000566740.2 | protein_coding | 1013 | chr15 | TogoVar | ||||||
GOLGA8M_chr15_28693583_28717421 | 28698035 | CTGGCCTC others(2): Show |
C | downstream_gene_variant | MODIFIER | HG02280.hp1 HG02451.hp1 HG03453.hp2 others(1): Show |
a0015 | a0015c0015 | a0015c0015t0015a0015c0015t0042 | a0015c0015t0015g0029a0015c0015t0015g0082a0015c0015t0042g0081 | 4 | 441 | 0.0091 | -9 | c.*39 others(20): Show |
GOLGA8M | ENSG00000188626.7 | transcript | ENST00000563027.2 | protein_coding | 547 | chr15 | TogoVar | ||||||
GOLGA8O_chr15_32436914_32460634 | 32455872 | TGCTTTAA others(2): Show |
T | upstream_gene_variant | MODIFIER | HG02145.hp1 HG02615.hp2 HG02622.hp2 others(2): Show |
a0006a0037 | a0006c0005a0037c0039 | a0006c0005t0012a0037c0039t0036 | a0006c0005t0012g0006a0006c0005t0012g0041a0037c0039t0036g0050 | 5 | 214 | 0.0234 | -9 | c.-34 others(18): Show |
GOLGA8O | ENSG00000206127.11 | transcript | ENST00000509311.7 | protein_coding | 239 | chr15 | TogoVar | ||||||
GOLIM4_chr3_168003689_168100924 | 168050822 | TATAATAA others(2): Show |
T | intron_variant | MODIFIER | HG01169.hp2 HG01516.hp2 HG01978.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0010a0001c0001t0011others(1): Show | a0001c0001t0003g0175a0001c0001t0010g0016a0001c0001t0010g0023others(3): Show | 6 | 228 | 0.0263 | -9 | c.188 others(26): Show |
GOLIM4 | ENSG00000173905.9 | transcript | ENST00000470487.6 | protein_coding | 1/15 | chr3 | TogoVar | ||||||
GOLM2_chr15_44283719_44420758 | 44288543 | AGAGAGAG others(2): Show |
A | upstream_gene_variant | MODIFIER | HG00673.hp1 HG03209.hp1 HG03225.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0011 | a0001c0001t0001g0092a0001c0001t0001g0098a0001c0001t0005g0120others(1): Show | 4 | 150 | 0.0267 | -9 | c.-48 others(18): Show |
GOLM2 | ENSG00000166734.20 | transcript | ENST00000299957.11 | protein_coding | 175 | chr15 | TogoVar | ||||||
GOLPH3L_chr1_150641230_150702154 | 150683725 | AAAAAAAA others(2): Show |
A | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp2 HG01175.hp1 others(16): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(3): Show | a0001c0001t0002g0020a0001c0001t0002g0244a0001c0001t0002g0298others(16): Show | 19 | 348 | 0.0546 | -9 | c.183 others(28): Show |
GOLPH3L | ENSG00000143457.11 | transcript | ENST00000271732.8 | protein_coding | 2/4 | chr1 | TogoVar | ||||||
GOLPH3_chr5_32119716_32179319 | 32155956 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01168.hp1 HG01243.hp2 HG01261.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027a0001c0001t0001g0028a0001c0001t0001g0031others(7): Show | 10 | 380 | 0.0263 | -9 | c.226 others(28): Show |
GOLPH3 | ENSG00000113384.14 | transcript | ENST00000265070.7 | protein_coding | 1/3 | chr5 | TogoVar | ||||||
GORAB_chr1_170527166_170558834 | 170547406 | GCTGCTGC others(2): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(299): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0002c0002others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0005others(124): Show | 302 | 356 | 0.8483 | -9 | c.662 others(26): Show |
GORAB | ENSG00000120370.14 | transcript | ENST00000367763.8 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
GOSR2_chr17_46918160_46947020 | 46946282 | CAAAAAAA others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00735.hp1 others(26): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0005a0001c0001t0021a0002c0002t0007others(1): Show | a0001c0001t0005g0006a0001c0001t0005g0013a0001c0001t0005g0028others(8): Show | 29 | 412 | 0.0704 | -9 | c.*75 others(20): Show |
GOSR2 | ENSG00000108433.17 | transcript | ENST00000640051.2 | protein_coding | 4263 | chr17 | TogoVar | ||||||
GP1BB_chr22_19718539_19729771 | 19725898 | CGCTGTCG others(2): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(310): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0005others(12): Show | 313 | 410 | 0.7634 | -9 | c.*14 others(20): Show |
GP1BB | ENSG00000203618.6 | transcript | ENST00000366425.4 | protein_coding | 1128 | chr22 | TogoVar | ||||||
GPA33_chr1_167047836_167095377 | 167056927 | CTGTGTGT others(2): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG04228.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005 | a0001c0001t0003g0086a0001c0001t0005g0085a0001c0001t0005g0087others(1): Show | 4 | 370 | 0.0108 | -9 | c.572 others(26): Show |
GPA33 | ENSG00000143167.12 | transcript | ENST00000367868.4 | protein_coding | 4/6 | chr1 | TogoVar | ||||||
GPALPP1_chr13_44984538_45035305 | 45011068 | CAGCAAAG others(2): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00609.hp1 HG00621.hp1 others(46): Show |
a0001a0006 | a0001c0001a0006c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0296a0001c0001t0002g0282a0001c0001t0002g0286others(45): Show | 49 | 348 | 0.1408 | -9 | c.408 others(26): Show |
GPALPP1 | ENSG00000133114.18 | transcript | ENST00000379151.9 | protein_coding | 4/7 | chr13 | TogoVar | ||||||
GPAT3_chr4_83531108_83610875 | 83608616 | TGTGTACA others(2): Show |
T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(177): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(6): Show | a0001c0001t0002g0015a0001c0001t0002g0025a0001c0001t0002g0039others(177): Show | 180 | 334 | 0.5389 | -9 | c.*38 others(20): Show |
GPAT3 | ENSG00000138678.11 | transcript | ENST00000264409.5 | protein_coding | 2742 | chr4 | TogoVar | ||||||
GPAT4_chr8_41573200_41630001 | 41581993 | ATTTTTTT others(2): Show |
A | intron_variant | MODIFIER | HG02074.hp2 HG02132.hp1 HG02165.hp1 others(19): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0010a0001c0001t0005g0021a0001c0001t0005g0022others(15): Show | 22 | 410 | 0.0537 | -9 | c.-84 others(28): Show |
GPAT4 | ENSG00000158669.11 | transcript | ENST00000396987.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
GPAT4_chr8_41573200_41630001 | 41616735 | AGTAAAAT others(2): Show |
A | intron_variant | MODIFIER | HG02055.hp1 HG02280.hp1 HG02647.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0004a0001c0001t0008g0096a0001c0001t0008g0097others(2): Show | 8 | 410 | 0.0195 | -9 | c.105 others(28): Show |
GPAT4 | ENSG00000158669.11 | transcript | ENST00000396987.7 | protein_coding | 10/12 | chr8 | TogoVar | ||||||
GPATCH2L_chr14_76146922_76219343 | 76204956 | TTTGTTGT others(2): Show |
T | 3_prime_UTR_variant | MODIFIER | HG01891.hp1 HG02145.hp1 HG02258.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0060a0001c0001t0061others(1): Show | a0001c0001t0011g0029a0001c0001t0011g0172a0001c0001t0011g0174others(6): Show | 10 | 402 | 0.0249 | -9 | c.*31 others(20): Show |
GPATCH2L | ENSG00000089916.18 | transcript | ENST00000261530.12 | protein_coding | 10/10 | 3123 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||
GPATCH2_chr1_217421992_217636090 | 217544368 | GAGCAACA others(2): Show |
G | intron_variant | MODIFIER | HG01243.hp1 HG01891.hp1 HG02280.hp2 others(6): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0006a0001c0001t0009a0001c0001t0011others(6): Show | a0001c0001t0006g0100a0001c0001t0009g0178a0001c0001t0011g0141others(6): Show | 9 | 188 | 0.0479 | -9 | c.109 others(30): Show |
GPATCH2 | ENSG00000092978.11 | transcript | ENST00000366935.8 | protein_coding | 5/9 | chr1 | TogoVar | ||||||
GPATCH2_chr1_217421992_217636090 | 217633503 | TGGGAGGC others(2): Show |
T | upstream_gene_variant | MODIFIER | HG00609.hp2 HG00741.hp2 HG01106.hp2 others(14): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(1): Show | a0001c0001t0002g0117a0001c0001t0002g0118a0001c0001t0002g0121others(14): Show | 17 | 188 | 0.0904 | -9 | c.-25 others(20): Show |
GPATCH2 | ENSG00000092978.11 | transcript | ENST00000366935.8 | protein_coding | 2414 | chr1 | TogoVar | ||||||
GPATCH2_chr1_217421992_217636090 | 217634897 | TTTGTTGT others(2): Show |
T | upstream_gene_variant | MODIFIER | HG01891.hp1 HG02486.hp2 HG03225.hp2 |
a0001 | a0001c0001 | a0001c0001t0023a0001c0001t0024a0001c0001t0025 | a0001c0001t0023g0002a0001c0001t0024g0003a0001c0001t0025g0001 | 3 | 188 | 0.0160 | -9 | c.-39 others(20): Show |
GPATCH2 | ENSG00000092978.11 | transcript | ENST00000366935.8 | protein_coding | 3808 | chr1 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44392427 | ATTTTTTT others(2): Show |
A | downstream_gene_variant | MODIFIER | HG00741.hp2 HG01243.hp1 HG01978.hp2 others(8): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0261a0001c0002t0001g0267a0001c0002t0001g0277others(8): Show | 11 | 326 | 0.0337 | -9 | c.*51 others(20): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 2853 | chr17 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44468373 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp1 HG02572.hp2 others(11): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002 | a0001c0002t0001g0011a0001c0002t0001g0012a0001c0002t0001g0013others(11): Show | 14 | 326 | 0.0429 | -9 | c.121 others(26): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 2/7 | chr17 | TogoVar | ||||||
GPATCH8_chr17_44390281_44508406 | 44483177 | ATATATAT others(2): Show |
A | intron_variant | MODIFIER | HG02922.hp1 NA18612.hp2 NA18972.hp2 |
a0001a0005 | a0001c0001a0001c0002a0005c0009 | a0001c0001t0001a0001c0002t0001a0005c0009t0001 | a0001c0001t0001g0099a0001c0002t0001g0316a0005c0009t0001g0143 | 3 | 326 | 0.0092 | -9 | c.46- others(24): Show |
GPATCH8 | ENSG00000186566.13 | transcript | ENST00000591680.6 | protein_coding | 1/7 | chr17 | TogoVar | ||||||
GPBP1_chr5_57169059_57269673 | 57226729 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00733.hp1 HG02129.hp2 HG02132.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008 | a0001c0001t0001g0022a0001c0001t0001g0023a0001c0001t0001g0035others(4): Show | 7 | 290 | 0.0241 | -9 | c.64- others(24): Show |
GPBP1 | ENSG00000062194.16 | transcript | ENST00000506184.7 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GPC1_chr2_240430663_240473076 | 240451003 | TGGGTGGT others(2): Show |
T | intron_variant | MODIFIER | HG01346.hp2 HG02717.hp1 HG02818.hp2 others(3): Show |
a0001a0002 | a0001c0006a0002c0007 | a0001c0006t0008a0002c0007t0001 | a0001c0006t0008g0302a0002c0007t0001g0003 | 6 | 398 | 0.0151 | -9 | c.167 others(26): Show |
GPC1 | ENSG00000063660.9 | transcript | ENST00000264039.7 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GPC1_chr2_240430663_240473076 | 240456205 | TGACGGCG others(2): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG00544.hp2 others(45): Show |
a0001a0002 | a0001c0003a0001c0005a0002c0001 | a0001c0003t0003a0001c0003t0021a0001c0005t0017others(1): Show | a0001c0003t0003g0001a0001c0003t0003g0004a0001c0003t0003g0010others(32): Show | 48 | 398 | 0.1206 | -9 | c.167 others(26): Show |
GPC1 | ENSG00000063660.9 | transcript | ENST00000264039.7 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
GPC3_chrX_133530745_133990594 | 133613693 | GATTTAAA others(2): Show |
G | intron_variant | MODIFIER | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0071 | 1 | 152 | 0.0066 | -9 | c.141 others(30): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133661624 | CTCTCTCT others(2): Show |
C | intron_variant | MODIFIER | HG01255.hp1 HG01928.hp1 HG02074.hp1 others(7): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0005a0001c0001t0001g0029a0001c0001t0001g0034others(7): Show | 10 | 152 | 0.0658 | -9 | c.141 others(25): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133661625 | TCTCTCTC others(2): Show |
T | intron_variant | MODIFIER | HG02300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0045 | 1 | 152 | 0.0066 | -9 | c.141 others(25): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 6/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133776878 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG02257.hp2 HG02922.hp1 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0126a0001c0002t0002g0147 | 2 | 152 | 0.0132 | -9 | c.338 others(28): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133823128 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | NA18522.hp1 NA19030.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0009 | a0001c0001t0001g0120a0001c0002t0009g0152 | 2 | 152 | 0.0132 | -9 | c.338 others(28): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC3_chrX_133530745_133990594 | 133849084 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0120 | 1 | 152 | 0.0066 | -9 | c.338 others(28): Show |
GPC3 | ENSG00000147257.16 | transcript | ENST00000370818.8 | protein_coding | 2/7 | chrX | TogoVar | ||||||
GPC4_chrX_133295103_133420489 | 133319443 | CAAAAAAA others(2): Show |
C | intron_variant | MODIFIER | HG01978.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0042 | 1 | 221 | 0.0045 | -9 | c.711 others(26): Show |
GPC4 | ENSG00000076716.9 | transcript | ENST00000370828.4 | protein_coding | 3/8 | chrX | TogoVar | ||||||
GPC4_chrX_133295103_133420489 | 133347248 | GTTTTTTT others(2): Show |
G | intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0124 | 1 | 221 | 0.0045 | -9 | c.161 others(26): Show |
GPC4 | ENSG00000076716.9 | transcript | ENST00000370828.4 | protein_coding | 1/8 | chrX | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 91398671 | CGGCGGCA others(2): Show |
C | 5_prime_UTR_variant | MODIFIER | HG01109.hp2 HG01261.hp1 HG01261.hp2 others(23): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0004t0001others(3): Show | a0001c0001t0001g0005a0001c0001t0001g0006a0001c0001t0001g0007others(23): Show | 26 | 42 | 0.6191 | -9 | c.-34 others(18): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 1/8 | 341 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||
GPC5_chr13_91393621_92872237 | 92004459 | TATATATA others(2): Show |
T | intron_variant | MODIFIER | HG02615.hp1 HG02622.hp2 HG03471.hp2 others(1): Show |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0001a0001c0001t0002a0004c0006t0001 | a0001c0001t0001g0011a0001c0001t0001g0020a0001c0001t0002g0042others(1): Show | 4 | 42 | 0.0952 | -9 | c.140 others(30): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 6/7 | chr13 | TogoVar | ||||||
GPC5_chr13_91393621_92872237 | 92527173 | AGAAAGAA others(2): Show |
A | intron_variant | MODIFIER | HG02615.hp2 HG03453.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0001 | a0001c0001t0002g0034a0001c0004t0001g0024 | 2 | 42 | 0.0476 | -9 | c.156 others(32): Show |
GPC5 | ENSG00000179399.16 | transcript | ENST00000377067.9 | protein_coding | 7/7 | chr13 | TogoVar | ||||||
GPC6_chr13_93221807_94413020 | 93340026 | CTTTTTTT others(2): Show |
C | intron_variant | MODIFIER | HG00558.hp2 HG01433.hp2 HG03017.hp1 others(8): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(7): Show | a0001c0001t0001g0071a0001c0001t0001g0075a0001c0001t0004g0070others(8): Show | 11 | 76 | 0.1447 | -9 | c.160 others(30): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
GPC6_chr13_93221807_94413020 | 93552439 | TCTCCTCC others(2): Show |
T | intron_variant | MODIFIER | HG01975.hp1 HG01981.hp1 HG02647.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(7): Show | a0001c0001t0001g0026a0001c0001t0001g0037a0001c0001t0004g0070others(8): Show | 11 | 76 | 0.1447 | -9 | c.319 others(26): Show |
GPC6 | ENSG00000183098.12 | transcript | ENST00000377047.9 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr13 | TogoVar |