Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
A4GALT_chr22_42687121_42725870	42722872	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00639.hp1 HG00642.hp1 others(36): Show HG00323.hp1 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp2 HG01168.hp1 HG01261.hp1 HG01346.hp2 HG01934.hp1 HG02109.hp2 HG02257.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp2 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG03130.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03579.hp1 HG03654.hp1 HG03831.hp2 HG04115.hp2 NA18945.hp2 NA18967.hp2 NA19030.hp2 NA19064.hp2 NA20129.hp2 NA20300.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0007 others(3): Show a0001c0001 a0001c0002 a0001c0007 a0001c0010 a0002c0003 a0005c0006	a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 others(8): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 a0001c0001t0024 a0001c0002t0005 a0001c0002t0009 a0001c0007t0004 a0001c0010t0009 a0002c0003t0001 a0002c0003t0008 a0005c0006t0001	a0001c0001t0002g0235 a0001c0001t0002g0242 a0001c0001t0002g0243 others(35): Show a0001c0001t0002g0235 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0004g0232 a0001c0001t0004g0234 a0001c0001t0004g0237 a0001c0001t0004g0239 a0001c0001t0004g0392 a0001c0001t0018g0233 a0001c0001t0024g0241 a0001c0002t0005g0251 a0001c0002t0005g0252 a0001c0002t0005g0259 a0001c0002t0009g0246 a0001c0002t0009g0255 a0001c0007t0004g0393 a0001c0010t0009g0240 a0001c0010t0009g0247 a0001c0010t0009g0248 a0002c0003t0001g0228 a0002c0003t0001g0229 a0002c0003t0001g0230 a0002c0003t0001g0231 a0002c0003t0001g0236 a0002c0003t0001g0238 a0002c0003t0001g0245 a0002c0003t0001g0253 a0002c0003t0001g0254 a0002c0003t0001g0256 a0002c0003t0001g0257 a0002c0003t0001g0258 a0002c0003t0008g0080 a0005c0006t0001g0007 a0005c0006t0001g0260 a0005c0006t0001g0261 a0005c0006t0001g0394	39	404	0.0965	c.-22 others(5): Show c.-2263C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2002	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42722904	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02615.hp1 HG02572.hp2 HG02615.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0005 a0002c0003 a0004c0005	a0002c0003t0001 a0004c0005t0010 a0002c0003t0001 a0004c0005t0010	a0002c0003t0001g0088 a0004c0005t0010g0089 a0002c0003t0001g0088 a0004c0005t0010g0089	2	404	0.0050	c.-22 others(5): Show c.-2295T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2034	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723180	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0010 a0004c0005t0010	a0004c0005t0010g0280 a0004c0005t0010g0280	1	403	0.0025	c.-25 others(5): Show c.-2571G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2310	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723225	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02886.hp2 HG03486.hp2 HG02622.hp2 HG02886.hp2 HG03486.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0228 a0002c0003t0001g0229 a0002c0003t0001g0230 a0002c0003t0001g0228 a0002c0003t0001g0229 a0002c0003t0001g0230	3	404	0.0074	c.-26 others(5): Show c.-2616A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2355	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723233	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG01070.hp1 HG01071.hp2 others(15): Show HG00738.hp2 HG01070.hp1 HG01071.hp2 HG01952.hp2 HG02109.hp1 HG02148.hp2 HG02258.hp1 HG02630.hp2 HG02738.hp1 HG02896.hp1 HG02897.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03471.hp1 HG03516.hp1 HG03942.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0001c0011 others(1): Show a0001c0001 a0001c0009 a0001c0011 a0002c0003	a0001c0001t0004 a0001c0009t0013 a0001c0011t0004 others(1): Show a0001c0001t0004 a0001c0009t0013 a0001c0011t0004 a0002c0003t0001	a0001c0001t0004g0288 a0001c0001t0004g0289 a0001c0001t0004g0290 others(15): Show a0001c0001t0004g0288 a0001c0001t0004g0289 a0001c0001t0004g0290 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0294 a0001c0001t0004g0295 a0001c0001t0004g0296 a0001c0001t0004g0297 a0001c0001t0004g0298 a0001c0001t0004g0299 a0001c0009t0013g0383 a0001c0011t0004g0293 a0002c0003t0001g0384 a0002c0003t0001g0385 a0002c0003t0001g0386 a0002c0003t0001g0387 a0002c0003t0001g0388	18	404	0.0446	c.-26 others(5): Show c.-2624G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2363	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723295	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0063 a0001c0002t0003g0063	1	404	0.0025	c.-26 others(5): Show c.-2686C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2425	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723296	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0063 a0001c0002t0003g0063	1	404	0.0025	c.-26 others(5): Show c.-2687G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2426	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723329	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0253 a0002c0003t0001g0253	1	404	0.0025	c.-27 others(5): Show c.-2720G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2459	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723428	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00323.hp2 others(186): Show HG00140.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01993.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG03130.hp1 HG03239.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03831.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18966.hp2 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19001.hp2 NA19002.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp2 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0007 others(7): Show a0001c0001 a0001c0002 a0001c0007 a0001c0009 a0001c0010 a0002c0003 a0002c0008 a0003c0004 a0004c0005 a0005c0006	a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 others(19): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0001t0024 a0001c0001t0026 a0001c0002t0002 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0002t0009 a0001c0007t0004 a0001c0009t0013 a0001c0010t0009 a0002c0003t0001 a0002c0003t0004 a0002c0003t0008 a0002c0008t0001 a0003c0004t0006 a0004c0005t0010 a0005c0006t0001	a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 others(180): Show a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0090 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0098 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0117 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0141 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0218 a0001c0001t0002g0227 a0001c0001t0002g0235 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0004g0232 a0001c0001t0004g0234 a0001c0001t0004g0237 a0001c0001t0004g0239 a0001c0001t0004g0392 a0001c0001t0018g0233 a0001c0001t0019g0210 a0001c0001t0022g0114 a0001c0001t0024g0241 a0001c0001t0026g0174 a0001c0002t0002g0199 a0001c0002t0004g0091 a0001c0002t0004g0093 a0001c0002t0004g0097 a0001c0002t0005g0092 a0001c0002t0005g0096 a0001c0002t0005g0099 a0001c0002t0005g0100 a0001c0002t0005g0101 a0001c0002t0005g0102 a0001c0002t0005g0103 a0001c0002t0005g0115 a0001c0002t0005g0116 a0001c0002t0005g0119 a0001c0002t0005g0131 a0001c0002t0005g0136 a0001c0002t0005g0143 a0001c0002t0005g0150 a0001c0002t0005g0152 a0001c0002t0005g0173 a0001c0002t0005g0186 a0001c0002t0005g0201 a0001c0002t0005g0202 a0001c0002t0005g0203 a0001c0002t0005g0204 a0001c0002t0005g0205 a0001c0002t0005g0206 a0001c0002t0005g0217 a0001c0002t0005g0251 a0001c0002t0005g0252 a0001c0002t0005g0259 a0001c0002t0006g0006 a0001c0002t0006g0111 a0001c0002t0006g0118 a0001c0002t0006g0151 a0001c0002t0006g0166 a0001c0002t0006g0171 a0001c0002t0006g0213 a0001c0002t0006g0215 a0001c0002t0006g0219 a0001c0002t0006g0220 a0001c0002t0009g0124 a0001c0002t0009g0246 a0001c0002t0009g0255 a0001c0007t0004g0393 a0001c0009t0013g0113 a0001c0010t0009g0240 a0001c0010t0009g0247 a0001c0010t0009g0248 a0002c0003t0001g0005 a0002c0003t0001g0088 a0002c0003t0001g0123 a0002c0003t0001g0125 a0002c0003t0001g0126 a0002c0003t0001g0127 a0002c0003t0001g0142 a0002c0003t0001g0146 a0002c0003t0001g0160 a0002c0003t0001g0175 a0002c0003t0001g0176 a0002c0003t0001g0185 a0002c0003t0001g0200 a0002c0003t0001g0228 a0002c0003t0001g0229 a0002c0003t0001g0230 a0002c0003t0001g0231 a0002c0003t0001g0236 a0002c0003t0001g0238 a0002c0003t0001g0245 a0002c0003t0001g0253 a0002c0003t0001g0254 a0002c0003t0001g0256 a0002c0003t0001g0257 a0002c0003t0001g0258 a0002c0003t0004g0140 a0002c0003t0008g0013 a0002c0003t0008g0080 a0002c0008t0001g0112 a0003c0004t0006g0221 a0003c0004t0006g0222 a0003c0004t0006g0223 a0003c0004t0006g0224 a0003c0004t0006g0225 a0003c0004t0006g0226 a0004c0005t0010g0089 a0005c0006t0001g0007 a0005c0006t0001g0260 a0005c0006t0001g0261 a0005c0006t0001g0394	189	404	0.4678	c.-28 others(5): Show c.-2819C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2558	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723533	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2924G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2663	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723535	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2926G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2665	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723536	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2927G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2666	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723538	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	403	0.0025	c.-29 others(5): Show c.-2929C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2668	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723544	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2935G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2674	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723549	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2940C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2679	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723556	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2947T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2686	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723560	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2951G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2690	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723561	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2952T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2691	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723563	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2954G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2693	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723564	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2955A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2694	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723571	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2962G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2701	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723572	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2963T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2702	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723574	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2965T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2704	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723575	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2966G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2705	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723577	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2968T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2707	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723578	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2969T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2708	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723586	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2977T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2716	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723587	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2978T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2717	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723590	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG02145.hp2 HG02258.hp2 others(9): Show HG01884.hp1 HG02145.hp2 HG02258.hp2 HG02602.hp2 HG02698.hp1 HG02922.hp1 HG02970.hp2 HG03098.hp1 NA18946.hp1 NA19056.hp2 NA19066.hp2 NA19089.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0008	a0001c0001t0002 a0001c0001t0004 a0001c0002t0005 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0005 a0002c0003t0001 a0002c0008t0001	a0001c0001t0002g0004 a0001c0001t0002g0153 a0001c0001t0002g0154 others(8): Show a0001c0001t0002g0004 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0156 a0001c0001t0004g0287 a0001c0002t0005g0116 a0002c0003t0001g0275 a0002c0003t0001g0284 a0002c0003t0001g0285 a0002c0003t0001g0286 a0002c0008t0001g0381	12	403	0.0298	c.-29 others(5): Show c.-2981C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2720	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723590	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	392	0.0026	c.-29 others(5): Show c.-2981C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2720	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723592	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	403	0.0025	c.-29 others(5): Show c.-2983T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2722	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723593	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2984C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2723	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723594	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2985C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2724	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723597	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2988C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2727	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723598	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2989A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2728	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723599	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2990A>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2729	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723603	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2994A>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2733	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723604	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-29 others(5): Show c.-2995C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2734	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723610	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3001T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2740	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723611	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3002C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2741	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723615	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3006A>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2745	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723630	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3021G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2760	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723632	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3023T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2762	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723633	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3024C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2763	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723638	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3029A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2768	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723639	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3030C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2769	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723640	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3031C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2770	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723643	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3034C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2773	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723644	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0173 a0001c0002t0005g0173	1	404	0.0025	c.-30 others(5): Show c.-3035C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2774	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723646	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG02970.hp2 HG03688.hp1 HG02258.hp2 HG02970.hp2 HG03688.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0005 a0002c0003t0001 a0001c0002t0005 a0002c0003t0001	a0001c0002t0005g0173 a0002c0003t0001g0284 a0002c0003t0001g0286 a0001c0002t0005g0173 a0002c0003t0001g0284 a0002c0003t0001g0286	3	404	0.0074	c.-30 others(5): Show c.-3037G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2776	chr22	TogoVar

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