Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	chr	external
A1CF_chr10_50794409_50890627	50819250	G G	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03139.hp2 HG01981.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0041 a0001c0002t0004 a0001c0001t0041 a0001c0002t0004	a0001c0001t0041g0037 a0001c0002t0004g0036 a0001c0001t0041g0037 a0001c0002t0004g0036	2	338	0.0059	c.867 others(8): Show c.867+1302C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819291	C C	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0047 a0001c0001t0040g0047	1	338	0.0030	c.867 others(8): Show c.867+1261G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819292	G G	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp1 HG00544.hp2 others(66): Show HG00140.hp2 HG00280.hp1 HG00544.hp2 HG00621.hp1 HG00673.hp2 HG00738.hp2 HG00741.hp1 HG01071.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp2 HG01257.hp1 HG01361.hp2 HG01515.hp1 HG01975.hp1 HG01978.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp2 HG02135.hp1 HG02148.hp2 HG02523.hp2 HG02698.hp2 HG02738.hp1 HG03491.hp2 HG03492.hp2 HG03669.hp1 HG03688.hp2 HG04115.hp2 HG04184.hp1 NA18946.hp1 NA18947.hp2 NA18950.hp1 NA18954.hp2 NA18955.hp2 NA18960.hp2 NA18962.hp1 NA18964.hp1 NA18966.hp1 NA18969.hp1 NA18970.hp2 NA18975.hp1 NA18977.hp1 NA18980.hp2 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18987.hp2 NA18991.hp2 NA19003.hp2 NA19011.hp1 NA19012.hp1 NA19058.hp2 NA19060.hp2 NA19065.hp2 NA19066.hp1 NA19072.hp1 NA19075.hp1 NA19077.hp1 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19090.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0010 a0001c0001 a0001c0002 a0003c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0025 a0001c0001t0027 a0001c0001t0046 a0001c0002t0004 a0003c0010t0001	a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0021 others(57): Show a0001c0001t0001g0003 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0035 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0239 a0001c0001t0001g0246 a0001c0001t0002g0126 a0001c0001t0003g0115 a0001c0001t0003g0125 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0141 a0001c0001t0007g0023 a0001c0001t0020g0112 a0001c0001t0021g0110 a0001c0001t0023g0114 a0001c0001t0025g0123 a0001c0001t0027g0084 a0001c0001t0046g0124 a0001c0002t0004g0019 a0001c0002t0004g0105 a0003c0010t0001g0136	69	338	0.2041	c.867 others(8): Show c.867+1260C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819457	C C	T T	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03139.hp2 HG01981.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0041 a0001c0002t0004 a0001c0001t0041 a0001c0002t0004	a0001c0001t0041g0037 a0001c0002t0004g0036 a0001c0001t0041g0037 a0001c0002t0004g0036	2	338	0.0059	c.867 others(8): Show c.867+1095G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819491	C C	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03540.hp1 HG02559.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0015g0095 a0001c0001t0015g0096	2	338	0.0059	c.867 others(8): Show c.867+1061G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819494	T T	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02622.hp1 HG02647.hp2 others(3): Show HG02145.hp1 HG02622.hp1 HG02647.hp2 HG02723.hp1 HG02965.hp2 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0006 a0001c0001t0001 a0002c0004t0006	a0001c0001t0001g0029 a0001c0001t0001g0210 a0001c0001t0001g0213 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0210 a0001c0001t0001g0213 a0002c0004t0006g0212 a0002c0004t0006g0226	6	338	0.0178	c.867 others(8): Show c.867+1058A>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819551	C C	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02723.hp2 HG01243.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0241 a0001c0001t0019g0242 a0001c0001t0019g0241 a0001c0001t0019g0242	2	338	0.0059	c.867 others(8): Show c.867+1001G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819566	G G	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03139.hp1 HG06807.hp2 others(1): Show HG02258.hp1 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0008g0006 a0001c0001t0008g0098	4	338	0.0118	c.867 others(7): Show c.867+986C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819654	A A	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG03669.hp1 HG00140.hp2 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0027 a0001c0001t0001 a0001c0001t0027	a0001c0001t0001g0133 a0001c0001t0027g0084 a0001c0001t0001g0133 a0001c0001t0027g0084	2	338	0.0059	c.867 others(7): Show c.867+898T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819781	G G	C C	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0017 a0001c0008t0017	a0001c0008t0017g0042 a0001c0008t0017g0042	1	338	0.0030	c.867 others(7): Show c.867+771C>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819835	T T	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0015 a0001c0001t0043 others(1): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0043 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(4): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0043g0094 a0001c0002t0004g0160	8	338	0.0237	c.867 others(7): Show c.867+717A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819943	C C	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG03139.hp2 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 others(2): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(6): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160	10	338	0.0296	c.867 others(7): Show c.867+609G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50819990	T T	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02922.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG02922.hp2 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0037 a0001c0001t0008 a0001c0001t0037	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050 a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050	5	338	0.0148	c.867 others(7): Show c.867+562A>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820208	C C	T T	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0006 a0002c0006t0006	a0002c0006t0006g0045 a0002c0006t0006g0045	1	338	0.0030	c.867 others(7): Show c.867+344G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820453	G G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(2): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0008 a0002c0004 a0002c0006 a0001c0008 a0002c0004 a0002c0006	a0001c0008t0001 a0002c0004t0044 a0002c0006t0006 a0001c0008t0001 a0002c0004t0044 a0002c0006t0006	a0001c0008t0001g0039 a0002c0004t0044g0049 a0002c0006t0006g0044 others(2): Show a0001c0008t0001g0039 a0002c0004t0044g0049 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	5	338	0.0148	c.867 others(6): Show c.867+99C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	8/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820692	G G	A A	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0148 a0001c0001t0001g0148	1	338	0.0030	c.770 others(6): Show c.770-43C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820797	A A	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG03139.hp2 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 others(2): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(6): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160	10	338	0.0296	c.770 others(7): Show c.770-148T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820889	G G	A A	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0104 a0001c0003t0001g0104	1	338	0.0030	c.770 others(7): Show c.770-240C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50820933	T T	C C	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03139.hp2 HG01981.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0041 a0001c0002t0004 a0001c0001t0041 a0001c0002t0004	a0001c0001t0041g0037 a0001c0002t0004g0036 a0001c0001t0041g0037 a0001c0002t0004g0036	2	338	0.0059	c.770 others(7): Show c.770-284A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821359	C C	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG01981.hp2 others(7): Show HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG03139.hp2 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 others(2): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(6): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160	10	338	0.0296	c.770 others(7): Show c.770-710G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821442	A A	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0038 a0001c0001t0039g0038	1	338	0.0030	c.770 others(7): Show c.770-793T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821535	A A	C C	intron_variant intron_variant	MODIFIER	NA19079.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0176 a0001c0001t0002g0176	1	338	0.0030	c.770 others(7): Show c.770-886T>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821757	G G	A A	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0174 a0001c0001t0002g0174	1	338	0.0030	c.770 others(8): Show c.770-1108C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821807	G G	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG02572.hp1 others(2): Show HG01884.hp2 HG02055.hp1 HG02572.hp1 HG02630.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0004 a0001c0001t0009 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(1): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0002t0004g0160	5	338	0.0148	c.770 others(8): Show c.770-1158C>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50821966	T T	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02723.hp2 HG01243.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0241 a0001c0001t0019g0242 a0001c0001t0019g0241 a0001c0001t0019g0242	2	338	0.0059	c.770 others(8): Show c.770-1317A>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822075	C C	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03516.hp2 HG02258.hp2 HG03516.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0005 a0001c0007t0033 a0001c0007t0005 a0001c0007t0033	a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0007t0005g0244 a0001c0007t0033g0245	2	338	0.0059	c.770 others(8): Show c.770-1426G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822105	T T	A A	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0129 a0001c0001t0001g0129	1	338	0.0030	c.770 others(8): Show c.770-1456A>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822132	A A	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01258.hp1 HG01934.hp2 others(6): Show HG00738.hp1 HG01258.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG02273.hp1 HG03669.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0189 a0001c0001t0001g0234 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0189 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237	9	338	0.0266	c.770 others(8): Show c.770-1483T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822370	G G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	c.770 others(8): Show c.770-1721C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822465	G G	A A	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0237	1	338	0.0030	c.770 others(8): Show c.770-1816C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822497	C C	T T	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02615.hp1 NA20129.hp1 HG01069.hp2 HG02615.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0028 a0002c0004t0044 a0002c0004t0045 a0001c0001t0028 a0002c0004t0044 a0002c0004t0045	a0001c0001t0028g0052 a0002c0004t0044g0049 a0002c0004t0045g0200 a0001c0001t0028g0052 a0002c0004t0044g0049 a0002c0004t0045g0200	3	338	0.0089	c.770 others(8): Show c.770-1848G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822500	G G	A A	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0096 a0001c0001t0015g0096	1	338	0.0030	c.770 others(8): Show c.770-1851C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822594	T T	G G	intron_variant intron_variant	MODIFIER	HG02083.hp1 NA18986.hp2 NA19004.hp1 HG02083.hp1 NA18986.hp2 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0198 a0001c0001t0002g0028 a0001c0001t0002g0198	3	338	0.0089	c.770 others(8): Show c.770-1945A>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822746	A A	T T	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0033 a0001c0007t0033	a0001c0007t0033g0245 a0001c0007t0033g0245	1	338	0.0030	c.770 others(8): Show c.770-2097T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822756	G G	A A	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0041 a0001c0001t0016g0041	1	338	0.0030	c.770 others(8): Show c.770-2107C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822778	C C	T T	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0274 a0001c0001t0022g0274	1	338	0.0030	c.770 others(8): Show c.770-2129G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822817	C C	T T	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0093 a0001c0001t0011g0093	1	338	0.0030	c.770 others(8): Show c.770-2168G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822826	A A	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03516.hp2 HG02258.hp2 HG03516.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0005 a0001c0007t0033 a0001c0007t0005 a0001c0007t0033	a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0007t0005g0244 a0001c0007t0033g0245	2	338	0.0059	c.770 others(8): Show c.770-2177T>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822855	C C	T T	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03540.hp2 HG02886.hp2 HG03540.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0018 a0002c0004t0018	a0002c0004t0018g0034 a0002c0004t0018g0153 a0002c0004t0018g0034 a0002c0004t0018g0153	2	338	0.0059	c.770 others(8): Show c.770-2206G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50822885	C C	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0050 a0001c0001t0037g0050	1	338	0.0030	c.770 others(8): Show c.770-2236G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823008	G G	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0110 a0001c0001t0021g0110	1	338	0.0030	c.770 others(8): Show c.770-2359C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823283	G G	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00558.hp2 HG01346.hp1 others(19): Show HG00280.hp2 HG00558.hp2 HG01346.hp1 HG01943.hp2 HG01952.hp1 HG02027.hp2 HG02148.hp1 HG02155.hp2 HG03516.hp1 NA18939.hp2 NA18945.hp1 NA18948.hp2 NA18950.hp2 NA18954.hp1 NA18974.hp2 NA18978.hp2 NA18987.hp1 NA18993.hp1 NA19003.hp1 NA19006.hp1 NA19070.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0030 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0030 a0001c0003t0001 a0001c0003t0007 a0001c0003t0047	a0001c0001t0001g0220 a0001c0001t0030g0229 a0001c0003t0001g0009 others(16): Show a0001c0001t0001g0220 a0001c0001t0030g0229 a0001c0003t0001g0009 a0001c0003t0001g0025 a0001c0003t0001g0067 a0001c0003t0001g0104 a0001c0003t0001g0109 a0001c0003t0001g0137 a0001c0003t0001g0156 a0001c0003t0001g0214 a0001c0003t0001g0217 a0001c0003t0001g0218 a0001c0003t0001g0222 a0001c0003t0001g0227 a0001c0003t0001g0228 a0001c0003t0001g0230 a0001c0003t0007g0231 a0001c0003t0007g0232 a0001c0003t0047g0219	22	338	0.0651	c.770 others(8): Show c.770-2634C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823490	C C	A A	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19083.hp2 NA19007.hp1 NA19083.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0073 a0001c0002t0004g0079 a0001c0002t0004g0073 a0001c0002t0004g0079	2	338	0.0059	c.770 others(8): Show c.770-2841G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823533	C C	T T	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0141 a0001c0001t0003g0141	1	338	0.0030	c.770 others(8): Show c.770-2884G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823534	G G	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp2 HG01891.hp2 others(21): Show HG01243.hp1 HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02723.hp2 HG02897.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(2): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0002c0006	a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 others(10): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0019 a0001c0001t0037 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0001c0007t0005 a0001c0007t0033 a0001c0008t0001 a0001c0008t0017 a0002c0006t0006	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 others(18): Show a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0019g0241 a0001c0001t0019g0242 a0001c0001t0037g0050 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0008t0001g0039 a0001c0008t0017g0042 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	24	338	0.0710	c.770 others(8): Show c.770-2885C>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823648	G G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	c.770 others(8): Show c.770-2999C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823735	A A	G G	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0180 a0001c0001t0002g0180	1	338	0.0030	c.770 others(8): Show c.770-3086T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823863	G G	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02622.hp1 HG02145.hp1 HG02622.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0006 a0002c0004t0006	a0002c0004t0006g0212 a0002c0004t0006g0226 a0002c0004t0006g0212 a0002c0004t0006g0226	2	338	0.0059	c.770 others(8): Show c.770-3214C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823903	G G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	c.770 others(8): Show c.770-3254C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50823968	C C	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	c.770 others(8): Show c.770-3319G>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar

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