Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	external
ACOT9_chrX_23696055_23748276	23725241	T T	TG TG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0095 a0001c0001t0033g0095	1	309	0.0032	1	c.401 others(9): Show c.401-2489dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23725470	C C	CA CA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(147): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp1 HG01981.hp1 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03927.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18948.hp1 NA18950.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18975.hp2 NA18977.hp1 NA18981.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp2 NA19005.hp1 NA19006.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19067.hp1 NA19070.hp1 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA20752.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0005 others(3): Show a0001 a0003 a0005 a0006 a0007 a0008	a0001c0001 a0001c0002 a0003c0004 others(4): Show a0001c0001 a0001c0002 a0003c0004 a0005c0007 a0006c0008 a0007c0005 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(42): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0053 a0001c0001t0054 a0001c0002t0001 a0001c0002t0010 a0001c0002t0013 a0001c0002t0016 a0001c0002t0017 a0001c0002t0029 a0001c0002t0030 a0001c0002t0049 a0003c0004t0014 a0003c0004t0050 a0005c0007t0055 a0006c0008t0019 a0007c0005t0002 a0008c0010t0007	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0114 others(143): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0171 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0203 a0001c0001t0001g0224 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0259 a0001c0001t0001g0262 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0002g0154 a0001c0001t0002g0163 a0001c0001t0002g0230 a0001c0001t0002g0253 a0001c0001t0002g0256 a0001c0001t0002g0265 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0003g0244 a0001c0001t0004g0116 a0001c0001t0004g0144 a0001c0001t0004g0207 a0001c0001t0004g0211 a0001c0001t0004g0231 a0001c0001t0004g0234 a0001c0001t0004g0235 a0001c0001t0004g0245 a0001c0001t0004g0247 a0001c0001t0004g0281 a0001c0001t0004g0282 a0001c0001t0004g0285 a0001c0001t0004g0289 a0001c0001t0005g0031 a0001c0001t0005g0036 a0001c0001t0005g0048 a0001c0001t0005g0056 a0001c0001t0005g0069 a0001c0001t0005g0071 a0001c0001t0005g0072 a0001c0001t0005g0084 a0001c0001t0005g0087 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0006g0020 a0001c0001t0006g0025 a0001c0001t0006g0040 a0001c0001t0006g0044 a0001c0001t0006g0060 a0001c0001t0006g0066 a0001c0001t0006g0070 a0001c0001t0007g0003 a0001c0001t0007g0100 a0001c0001t0007g0159 a0001c0001t0007g0165 a0001c0001t0007g0178 a0001c0001t0007g0187 a0001c0001t0007g0192 a0001c0001t0007g0199 a0001c0001t0007g0205 a0001c0001t0007g0266 a0001c0001t0008g0021 a0001c0001t0008g0054 a0001c0001t0008g0080 a0001c0001t0008g0082 a0001c0001t0009g0228 a0001c0001t0009g0229 a0001c0001t0009g0284 a0001c0001t0012g0030 a0001c0001t0012g0039 a0001c0001t0012g0058 a0001c0001t0012g0063 a0001c0001t0012g0075 a0001c0001t0012g0077 a0001c0001t0012g0079 a0001c0001t0014g0016 a0001c0001t0014g0037 a0001c0001t0014g0081 a0001c0001t0015g0057 a0001c0001t0015g0061 a0001c0001t0015g0093 a0001c0001t0018g0152 a0001c0001t0018g0166 a0001c0001t0019g0140 a0001c0001t0019g0261 a0001c0001t0020g0188 a0001c0001t0021g0062 a0001c0001t0023g0142 a0001c0001t0023g0148 a0001c0001t0026g0042 a0001c0001t0027g0051 a0001c0001t0028g0076 a0001c0001t0032g0094 a0001c0001t0033g0095 a0001c0001t0034g0297 a0001c0001t0036g0170 a0001c0001t0041g0276 a0001c0001t0042g0283 a0001c0001t0044g0213 a0001c0001t0045g0125 a0001c0001t0046g0216 a0001c0001t0053g0129 a0001c0001t0054g0193 a0001c0002t0001g0214 a0001c0002t0010g0002 a0001c0002t0010g0143 a0001c0002t0010g0157 a0001c0002t0010g0164 a0001c0002t0010g0195 a0001c0002t0010g0277 a0001c0002t0010g0278 a0001c0002t0013g0012 a0001c0002t0013g0041 a0001c0002t0013g0047 a0001c0002t0013g0083 a0001c0002t0013g0092 a0001c0002t0016g0011 a0001c0002t0016g0059 a0001c0002t0016g0064 a0001c0002t0017g0014 a0001c0002t0017g0015 a0001c0002t0017g0090 a0001c0002t0029g0028 a0001c0002t0030g0088 a0001c0002t0049g0123 a0003c0004t0014g0022 a0003c0004t0050g0217 a0005c0007t0055g0271 a0006c0008t0019g0113 a0007c0005t0002g0236 a0008c0010t0007g0186	150	309	0.4854	1	c.401 others(9): Show c.401-2718dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23726023	A A	AC AC	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0002 a0007c0005t0002	a0007c0005t0002g0236 a0007c0005t0002g0236	1	309	0.0032	1	c.401 others(9): Show c.401-3271dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23726309	G G	GA GA	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0002 a0007c0005t0002	a0007c0005t0002g0236 a0007c0005t0002g0236	1	309	0.0032	1	c.401 others(9): Show c.401-3557dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23727998	C C	CA CA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01884.hp1 HG02055.hp1 others(8): Show HG01074.hp1 HG01884.hp1 HG02055.hp1 HG02258.hp1 HG02293.hp2 HG02572.hp1 HG02886.hp1 HG03209.hp1 HG03225.hp1 HG03486.hp2 NA18522.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 others(5): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0033 a0003c0004t0014 a0003c0004t0050	a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0012g0058 others(8): Show a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0012g0058 a0001c0001t0014g0037 a0001c0001t0014g0081 a0001c0001t0015g0057 a0001c0001t0015g0061 a0001c0001t0015g0093 a0001c0001t0033g0095 a0003c0004t0014g0022 a0003c0004t0050g0217	11	309	0.0356	1	c.400 others(9): Show c.400+2528dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23729070	A A	AC AC	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02145.hp1 HG04184.hp2 others(1): Show HG00597.hp1 HG02145.hp1 HG04184.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0022 others(1): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0022 a0001c0001t0046	a0001c0001t0003g0104 a0001c0001t0008g0065 a0001c0001t0022g0298 others(1): Show a0001c0001t0003g0104 a0001c0001t0008g0065 a0001c0001t0022g0298 a0001c0001t0046g0216	4	309	0.0129	1	c.400 others(9): Show c.400+1456dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23729629	A A	AT AT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(228): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18987.hp1 NA18990.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp1 NA19067.hp1 NA19070.hp1 NA19074.hp1 NA19075.hp1 NA19076.hp1 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008	a0001c0001 a0001c0002 a0001c0009 others(7): Show a0001c0001 a0001c0002 a0001c0009 a0002c0003 a0003c0004 a0004c0006 a0005c0007 a0006c0008 a0007c0005 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(54): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 a0001c0002t0001 a0001c0002t0010 a0001c0002t0013 a0001c0002t0016 a0001c0002t0017 a0001c0002t0029 a0001c0002t0030 a0001c0002t0049 a0001c0009t0003 a0002c0003t0002 a0002c0003t0043 a0003c0004t0014 a0003c0004t0050 a0004c0006t0047 a0005c0007t0055 a0006c0008t0019 a0007c0005t0002 a0008c0010t0007	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0101 others(220): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0101 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0150 a0001c0001t0001g0171 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0203 a0001c0001t0001g0224 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0296 a0001c0001t0002g0102 a0001c0001t0002g0154 a0001c0001t0002g0163 a0001c0001t0002g0172 a0001c0001t0002g0201 a0001c0001t0002g0218 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0230 a0001c0001t0002g0239 a0001c0001t0002g0253 a0001c0001t0002g0256 a0001c0001t0002g0265 a0001c0001t0002g0291 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0112 a0001c0001t0003g0122 a0001c0001t0003g0124 a0001c0001t0003g0130 a0001c0001t0003g0158 a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0003g0174 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0003g0198 a0001c0001t0003g0202 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0212 a0001c0001t0003g0222 a0001c0001t0003g0225 a0001c0001t0003g0232 a0001c0001t0003g0238 a0001c0001t0003g0243 a0001c0001t0003g0244 a0001c0001t0003g0267 a0001c0001t0004g0116 a0001c0001t0004g0144 a0001c0001t0004g0153 a0001c0001t0004g0204 a0001c0001t0004g0207 a0001c0001t0004g0208 a0001c0001t0004g0211 a0001c0001t0004g0215 a0001c0001t0004g0231 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0004g0235 a0001c0001t0004g0245 a0001c0001t0004g0247 a0001c0001t0004g0281 a0001c0001t0004g0282 a0001c0001t0004g0285 a0001c0001t0004g0289 a0001c0001t0005g0031 a0001c0001t0005g0048 a0001c0001t0005g0056 a0001c0001t0005g0072 a0001c0001t0005g0087 a0001c0001t0005g0089 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0006g0020 a0001c0001t0006g0025 a0001c0001t0006g0040 a0001c0001t0006g0044 a0001c0001t0006g0050 a0001c0001t0006g0060 a0001c0001t0006g0066 a0001c0001t0006g0073 a0001c0001t0006g0074 a0001c0001t0006g0091 a0001c0001t0007g0003 a0001c0001t0007g0100 a0001c0001t0007g0159 a0001c0001t0007g0165 a0001c0001t0007g0178 a0001c0001t0007g0187 a0001c0001t0007g0192 a0001c0001t0007g0199 a0001c0001t0007g0205 a0001c0001t0007g0266 a0001c0001t0008g0049 a0001c0001t0008g0054 a0001c0001t0008g0080 a0001c0001t0008g0082 a0001c0001t0008g0086 a0001c0001t0009g0147 a0001c0001t0009g0181 a0001c0001t0009g0228 a0001c0001t0009g0229 a0001c0001t0009g0284 a0001c0001t0009g0290 a0001c0001t0011g0023 a0001c0001t0011g0026 a0001c0001t0011g0027 a0001c0001t0011g0038 a0001c0001t0011g0068 a0001c0001t0012g0030 a0001c0001t0012g0039 a0001c0001t0012g0058 a0001c0001t0012g0063 a0001c0001t0012g0075 a0001c0001t0012g0079 a0001c0001t0014g0037 a0001c0001t0014g0081 a0001c0001t0015g0057 a0001c0001t0015g0061 a0001c0001t0015g0093 a0001c0001t0018g0152 a0001c0001t0018g0166 a0001c0001t0018g0299 a0001c0001t0019g0140 a0001c0001t0019g0261 a0001c0001t0020g0097 a0001c0001t0020g0156 a0001c0001t0020g0188 a0001c0001t0021g0043 a0001c0001t0021g0062 a0001c0001t0023g0142 a0001c0001t0023g0148 a0001c0001t0024g0055 a0001c0001t0026g0042 a0001c0001t0027g0051 a0001c0001t0028g0076 a0001c0001t0031g0052 a0001c0001t0032g0094 a0001c0001t0033g0095 a0001c0001t0034g0297 a0001c0001t0036g0170 a0001c0001t0037g0173 a0001c0001t0038g0155 a0001c0001t0039g0295 a0001c0001t0040g0167 a0001c0001t0041g0276 a0001c0001t0042g0283 a0001c0001t0044g0213 a0001c0001t0045g0125 a0001c0001t0046g0216 a0001c0001t0051g0151 a0001c0001t0053g0129 a0001c0001t0054g0193 a0001c0002t0001g0214 a0001c0002t0010g0002 a0001c0002t0010g0143 a0001c0002t0010g0157 a0001c0002t0010g0164 a0001c0002t0010g0195 a0001c0002t0010g0277 a0001c0002t0010g0278 a0001c0002t0013g0012 a0001c0002t0013g0041 a0001c0002t0013g0047 a0001c0002t0013g0083 a0001c0002t0013g0092 a0001c0002t0016g0011 a0001c0002t0016g0059 a0001c0002t0016g0064 a0001c0002t0017g0014 a0001c0002t0017g0015 a0001c0002t0017g0090 a0001c0002t0029g0028 a0001c0002t0030g0088 a0001c0002t0049g0123 a0001c0009t0003g0275 a0002c0003t0002g0010 a0002c0003t0002g0293 a0002c0003t0043g0294 a0003c0004t0014g0022 a0003c0004t0050g0217 a0004c0006t0047g0196 a0005c0007t0055g0271 a0006c0008t0019g0113 a0007c0005t0002g0236 a0008c0010t0007g0186	231	309	0.7476	1	c.400 others(8): Show c.400+897dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23730092	A A	AT AT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG04184.hp2 NA18987.hp2 HG00642.hp1 HG04184.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008	a0001c0001t0002g0103 a0001c0001t0004g0227 a0001c0001t0008g0065 a0001c0001t0002g0103 a0001c0001t0004g0227 a0001c0001t0008g0065	3	309	0.0097	1	c.400 others(8): Show c.400+434dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	6/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23731474	C C	CA CA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp1 HG00609.hp1 others(32): Show HG00408.hp2 HG00558.hp1 HG00609.hp1 HG01978.hp1 HG02027.hp1 HG02074.hp1 HG02080.hp1 HG02129.hp1 HG02132.hp1 HG02523.hp2 HG02602.hp1 HG02738.hp1 HG03654.hp1 HG03710.hp1 HG04204.hp1 NA18940.hp1 NA18943.hp1 NA18946.hp1 NA18952.hp1 NA18953.hp1 NA18957.hp2 NA18968.hp2 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18979.hp1 NA18987.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19056.hp1 NA19060.hp1 NA19074.hp1 NA19086.hp1 NA19090.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0018 a0001c0001t0020 a0001c0001t0036 a0001c0001t0037 a0004c0006t0047	a0001c0001t0001g0171 a0001c0001t0001g0180 a0001c0001t0001g0203 others(31): Show a0001c0001t0001g0171 a0001c0001t0001g0180 a0001c0001t0001g0203 a0001c0001t0002g0172 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0218 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0003g0006 a0001c0001t0003g0174 a0001c0001t0003g0175 a0001c0001t0003g0182 a0001c0001t0003g0198 a0001c0001t0003g0202 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0212 a0001c0001t0003g0225 a0001c0001t0004g0204 a0001c0001t0004g0208 a0001c0001t0004g0211 a0001c0001t0004g0215 a0001c0001t0004g0285 a0001c0001t0008g0086 a0001c0001t0009g0147 a0001c0001t0009g0181 a0001c0001t0018g0299 a0001c0001t0020g0097 a0001c0001t0020g0156 a0001c0001t0020g0188 a0001c0001t0036g0170 a0001c0001t0037g0173 a0004c0006t0047g0196	35	309	0.1133	1	c.192 others(8): Show c.192-489dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	4/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23732649	C C	CA CA	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0049 a0001c0002t0049	a0001c0002t0049g0123 a0001c0002t0049g0123	1	309	0.0032	1	c.191 others(8): Show c.191+522dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	4/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23733813	G G	GC GC	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0002 a0007c0005t0002	a0007c0005t0002g0236 a0007c0005t0002g0236	1	309	0.0032	1	c.145 others(16): Show c.145+527_145+528insG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	3/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23733949	T T	TG TG	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0057 a0001c0001t0015g0057	1	309	0.0032	1	c.145 others(8): Show c.145+391dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	3/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23733974	T T	TG TG	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0002 a0007c0005t0002	a0007c0005t0002g0236 a0007c0005t0002g0236	1	309	0.0032	1	c.145 others(8): Show c.145+366dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	3/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23734051	G G	GC GC	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0002 a0007c0005t0002	a0007c0005t0002g0236 a0007c0005t0002g0236	1	309	0.0032	1	c.145 others(8): Show c.145+289dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	3/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23734981	C C	CA CA	intron_variant intron_variant	MODIFIER	HG03516.hp1 NA18968.hp1 NA18977.hp1 HG03516.hp1 NA18968.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0019 a0001c0002t0013 a0001c0001t0002 a0001c0001t0019 a0001c0002t0013	a0001c0001t0002g0256 a0001c0001t0019g0261 a0001c0002t0013g0083 a0001c0001t0002g0256 a0001c0001t0019g0261 a0001c0002t0013g0083	3	309	0.0097	1	c.119 others(8): Show c.119-615dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	2/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23735240	C C	CA CA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG00735.hp2 others(14): Show HG00423.hp2 HG00621.hp1 HG00735.hp2 HG01358.hp1 HG01515.hp1 HG01517.hp2 HG01928.hp1 HG01981.hp2 HG02135.hp1 HG02486.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp1 NA18977.hp1 NA18981.hp1 NA18993.hp2 NA20905.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0007c0005 a0001c0001 a0001c0002 a0007c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0019 a0001c0002t0013 a0007c0005t0002	a0001c0001t0001g0241 a0001c0001t0001g0259 a0001c0001t0001g0260 others(14): Show a0001c0001t0001g0241 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0274 a0001c0001t0002g0257 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0003g0238 a0001c0001t0009g0258 a0001c0001t0009g0284 a0001c0001t0019g0261 a0001c0002t0013g0012 a0007c0005t0002g0236	17	309	0.0550	1	c.118 others(8): Show c.118+678dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	2/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23737342	C C	CA CA	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18953.hp1 NA18949.hp2 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0198 a0001c0001t0003g0222 a0001c0001t0003g0198 a0001c0001t0003g0222	2	309	0.0065	1	c.21- others(8): Show c.21-1327dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23737872	C C	CT CT	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03927.hp2 NA18906.hp2 others(2): Show HG01981.hp2 HG03927.hp2 NA18906.hp2 NA19076.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0038 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0038 a0001c0001t0054	a0001c0001t0001g0262 a0001c0001t0001g0270 a0001c0001t0003g0206 others(2): Show a0001c0001t0001g0262 a0001c0001t0001g0270 a0001c0001t0003g0206 a0001c0001t0038g0155 a0001c0001t0054g0193	5	309	0.0162	1	c.21- others(8): Show c.21-1857dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23739468	A A	AT AT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0096 a0001c0001t0002g0096	1	309	0.0032	1	c.21- others(8): Show c.21-3453dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23740115	C C	CT CT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp2 others(48): Show HG00408.hp1 HG00423.hp1 HG00438.hp2 HG00639.hp2 HG00642.hp1 HG01192.hp1 HG01257.hp2 HG01346.hp2 HG01978.hp2 HG01981.hp1 HG02004.hp1 HG02148.hp2 HG02165.hp2 HG02293.hp1 HG02451.hp2 HG02523.hp1 HG02622.hp2 HG02895.hp1 HG02897.hp2 HG03041.hp1 HG03239.hp2 HG03688.hp1 HG03831.hp1 NA18939.hp1 NA18947.hp2 NA18948.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18962.hp1 NA18964.hp1 NA18965.hp1 NA18973.hp2 NA18975.hp2 NA18979.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18994.hp1 NA18998.hp2 NA19006.hp1 NA19070.hp1 NA19074.hp2 NA19076.hp1 NA19081.hp2 NA19091.hp1 NA20300.hp1 NA20752.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0006c0008 a0001c0001 a0001c0002 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0019 a0001c0001t0023 a0001c0001t0032 a0001c0001t0038 a0001c0001t0045 a0001c0001t0052 a0001c0001t0053 a0001c0002t0049 a0006c0008t0019	a0001c0001t0001g0001 a0001c0001t0001g0101 a0001c0001t0001g0108 others(47): Show a0001c0001t0001g0001 a0001c0001t0001g0101 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0111 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0003g0104 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0112 a0001c0001t0003g0122 a0001c0001t0003g0124 a0001c0001t0003g0130 a0001c0001t0004g0116 a0001c0001t0007g0099 a0001c0001t0007g0100 a0001c0001t0007g0187 a0001c0001t0009g0098 a0001c0001t0011g0026 a0001c0001t0019g0140 a0001c0001t0023g0142 a0001c0001t0032g0094 a0001c0001t0038g0155 a0001c0001t0045g0125 a0001c0001t0052g0128 a0001c0001t0053g0129 a0001c0002t0049g0123 a0006c0008t0019g0113	51	309	0.1651	1	c.20+ others(8): Show c.20+3009dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23740551	A A	AC AC	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	309	0.0032	1	c.20+ others(8): Show c.20+2573dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23741354	G G	GA GA	intron_variant intron_variant	MODIFIER	HG00741.hp2 NA18939.hp2 NA20129.hp1 HG00741.hp2 NA18939.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0223 a0001c0001t0002g0191 a0001c0001t0003g0206 a0001c0001t0001g0223 a0001c0001t0002g0191 a0001c0001t0003g0206	3	309	0.0097	1	c.20+ others(8): Show c.20+1770dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23742236	G G	GA GA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01069.hp1 HG00544.hp2 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0022 a0001c0001t0004 a0001c0001t0022	a0001c0001t0004g0289 a0001c0001t0022g0288 a0001c0001t0004g0289 a0001c0001t0022g0288	2	309	0.0065	1	c.20+ others(14): Show c.20+888_20+889insT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding	1/15		chrX	TogoVar
ACOT9_chrX_23696055_23748276	23743838	G G	GC GC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-69 others(5): Show c.-695dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		563	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23743888	T T	TC TC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-74 others(5): Show c.-745dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		613	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23743891	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp1 others(142): Show HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00741.hp2 HG01070.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03239.hp2 HG03471.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18962.hp1 NA18964.hp1 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18993.hp1 NA18994.hp1 NA18998.hp2 NA19000.hp1 NA19004.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19056.hp1 NA19060.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19081.hp1 NA19081.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0006 others(1): Show a0001 a0004 a0006 a0008	a0001c0001 a0001c0002 a0004c0006 others(2): Show a0001c0001 a0001c0002 a0004c0006 a0006c0008 a0008c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0009 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0040 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0052 a0001c0001t0053 a0001c0001t0054 a0001c0002t0001 a0001c0002t0010 a0001c0002t0049 a0004c0006t0047 a0006c0008t0019 a0008c0010t0007	a0001c0001t0001g0001 a0001c0001t0001g0101 a0001c0001t0001g0108 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0101 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0150 a0001c0001t0001g0171 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0203 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0002g0096 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0111 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0154 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0172 a0001c0001t0002g0189 a0001c0001t0002g0191 a0001c0001t0002g0197 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0230 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0104 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0112 a0001c0001t0003g0122 a0001c0001t0003g0124 a0001c0001t0003g0149 a0001c0001t0003g0161 a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0003g0174 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0190 a0001c0001t0003g0194 a0001c0001t0003g0198 a0001c0001t0003g0202 a0001c0001t0003g0206 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0212 a0001c0001t0003g0222 a0001c0001t0003g0225 a0001c0001t0003g0267 a0001c0001t0004g0116 a0001c0001t0004g0144 a0001c0001t0004g0146 a0001c0001t0004g0153 a0001c0001t0004g0204 a0001c0001t0004g0207 a0001c0001t0004g0208 a0001c0001t0004g0211 a0001c0001t0004g0215 a0001c0001t0004g0227 a0001c0001t0004g0231 a0001c0001t0007g0003 a0001c0001t0007g0099 a0001c0001t0007g0100 a0001c0001t0007g0159 a0001c0001t0007g0165 a0001c0001t0007g0187 a0001c0001t0007g0192 a0001c0001t0007g0199 a0001c0001t0007g0205 a0001c0001t0009g0098 a0001c0001t0009g0147 a0001c0001t0009g0181 a0001c0001t0009g0226 a0001c0001t0009g0228 a0001c0001t0009g0229 a0001c0001t0018g0152 a0001c0001t0018g0166 a0001c0001t0018g0299 a0001c0001t0019g0140 a0001c0001t0020g0097 a0001c0001t0020g0156 a0001c0001t0020g0188 a0001c0001t0023g0142 a0001c0001t0023g0148 a0001c0001t0034g0297 a0001c0001t0036g0170 a0001c0001t0037g0173 a0001c0001t0038g0155 a0001c0001t0040g0167 a0001c0001t0044g0213 a0001c0001t0045g0125 a0001c0001t0046g0216 a0001c0001t0052g0128 a0001c0001t0053g0129 a0001c0001t0054g0193 a0001c0002t0001g0214 a0001c0002t0010g0002 a0001c0002t0010g0143 a0001c0002t0010g0157 a0001c0002t0010g0164 a0001c0002t0010g0195 a0001c0002t0049g0123 a0004c0006t0047g0196 a0006c0008t0019g0113 a0008c0010t0007g0186	145	309	0.4693	1	c.-74 others(5): Show c.-748dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		616	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23743924	A A	AC AC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-78 others(5): Show c.-781dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		649	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23744344	G G	GT GT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0287 a0001c0001t0009g0287	1	309	0.0032	1	c.-12 others(6): Show c.-1201dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		1069	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745087	C C	CT CT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-19 others(6): Show c.-1944dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		1812	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745321	A A	AC AC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-21 others(6): Show c.-2178dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2046	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745432	C C	CG CG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 NA18953.hp1 HG02080.hp2 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0198 a0001c0001t0007g0178 a0001c0001t0003g0198 a0001c0001t0007g0178	2	309	0.0065	1	c.-22 others(6): Show c.-2289dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2157	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745648	G G	GT GT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-25 others(6): Show c.-2505dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2373	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745705	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02293.hp2 HG02293.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0050 a0003c0004t0050	a0003c0004t0050g0217 a0003c0004t0050g0217	1	309	0.0032	1	c.-25 others(6): Show c.-2562dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2430	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745734	A A	AG AG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-25 others(6): Show c.-2591dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2459	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23745974	A A	AT AT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-28 others(6): Show c.-2831dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2699	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746067	T T	TG TG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-29 others(6): Show c.-2924dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2792	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746115	A A	AC AC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-29 others(6): Show c.-2972dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		2840	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746384	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0297 a0001c0001t0034g0297	1	309	0.0032	1	c.-32 others(6): Show c.-3241dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3109	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746449	C C	CT CT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00438.hp2 others(22): Show HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00741.hp1 HG01081.hp1 HG01257.hp2 HG01346.hp2 HG01358.hp1 HG01928.hp1 HG01981.hp2 HG02040.hp1 HG02083.hp1 HG02622.hp2 HG03688.hp1 HG03831.hp1 HG03942.hp1 HG04199.hp1 NA18962.hp1 NA18974.hp1 NA18981.hp1 NA18994.hp1 NA19012.hp1 NA19063.hp1 NA19083.hp1 NA20752.hp1	a0001 a0005 a0007 a0001 a0005 a0007	a0001c0001 a0005c0007 a0007c0005 a0001c0001 a0005c0007 a0007c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0020 a0001c0001t0042 a0001c0001t0053 a0005c0007t0055 a0007c0005t0002	a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0127 others(22): Show a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0246 a0001c0001t0001g0252 a0001c0001t0001g0270 a0001c0001t0001g0274 a0001c0001t0002g0111 a0001c0001t0002g0257 a0001c0001t0003g0238 a0001c0001t0003g0243 a0001c0001t0007g0099 a0001c0001t0007g0100 a0001c0001t0007g0266 a0001c0001t0009g0287 a0001c0001t0020g0097 a0001c0001t0042g0283 a0001c0001t0053g0129 a0005c0007t0055g0271 a0007c0005t0002g0236	25	309	0.0809	1	c.-33 others(6): Show c.-3306dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3174	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746577	T T	TC TC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-34 others(6): Show c.-3434dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3302	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746597	A A	AG AG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-34 others(6): Show c.-3454dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3322	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746654	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-35 others(12): Show c.-3511_-3510insT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3379	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746701	A A	AC AC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-35 others(6): Show c.-3558dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3426	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746732	G G	GC GC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-35 others(6): Show c.-3589dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3457	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746756	A A	AG AG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-36 others(6): Show c.-3613dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3481	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746859	G G	GA GA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0130 a0001c0001t0003g0130	1	309	0.0032	1	c.-37 others(6): Show c.-3716dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3584	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746914	A A	AT AT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-37 others(6): Show c.-3771dupA	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3639	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23746939	T T	TA TA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0101 a0001c0001t0001g0101	1	309	0.0032	1	c.-37 others(6): Show c.-3796dupT	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3664	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23747013	A A	AG AG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-38 others(6): Show c.-3870dupC	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3738	chrX	TogoVar
ACOT9_chrX_23696055_23748276	23747037	T T	TC TC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0178 a0001c0001t0007g0178	1	309	0.0032	1	c.-38 others(6): Show c.-3894dupG	ACOT9	ENSG00000123130.17	transcript	ENST00000379303.10	protein_coding		3762	chrX	TogoVar

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