Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CD300LG_chr17_43842176_43868639	43842715	T T	TCTCTCCA others(3): Show TCTCTCCACGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp2 others(51): Show HG00099.hp1 HG00099.hp2 HG00323.hp2 HG00642.hp2 HG01070.hp1 HG01071.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01255.hp2 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01952.hp1 HG02055.hp1 HG02145.hp1 HG02257.hp1 HG02258.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02717.hp1 HG02738.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA19030.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0008	a0001c0001 a0002c0002 a0002c0008 others(3): Show a0001c0001 a0002c0002 a0002c0008 a0003c0003 a0005c0005 a0008c0009	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(14): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0006 a0002c0002t0010 a0002c0002t0011 a0002c0002t0012 a0002c0002t0014 a0002c0002t0018 a0002c0008t0001 a0003c0003t0003 a0005c0005t0002 a0008c0009t0004	a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0066 others(28): Show a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0066 a0001c0001t0001g0082 a0001c0001t0002g0063 a0002c0002t0001g0018 a0002c0002t0001g0062 a0002c0002t0001g0065 a0002c0002t0002g0029 a0002c0002t0002g0061 a0002c0002t0003g0002 a0002c0002t0003g0023 a0002c0002t0003g0077 a0002c0002t0003g0122 a0002c0002t0004g0002 a0002c0002t0004g0014 a0002c0002t0004g0033 a0002c0002t0005g0030 a0002c0002t0005g0068 a0002c0002t0006g0113 a0002c0002t0010g0024 a0002c0002t0011g0034 a0002c0002t0012g0060 a0002c0002t0014g0002 a0002c0002t0018g0114 a0002c0008t0001g0076 a0003c0003t0003g0022 a0003c0003t0003g0119 a0003c0003t0003g0120 a0005c0005t0002g0064 a0008c0009t0004g0002	54	300	0.1800	10	c.-45 others(21): Show c.-4502_-4501insCTCTCCACGC	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4460		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842715	T T	TCTCTCTA others(3): Show TCTCTCTACGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02486.hp2 others(1): Show HG01167.hp1 HG01169.hp1 HG02486.hp2 NA19030.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0002 a0003c0003t0003 a0001c0001t0001 a0002c0002t0002 a0003c0003t0003	a0001c0001t0001g0048 a0002c0002t0002g0036 a0003c0003t0003g0022 a0001c0001t0001g0048 a0002c0002t0002g0036 a0003c0003t0003g0022	4	300	0.0133	10	c.-45 others(21): Show c.-4502_-4501insCTCTCTACGC	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4460		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842722	A A	ACGCCTCT others(3): Show ACGCCTCTCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0118 a0002c0002t0002g0118	1	300	0.0033	10	c.-44 others(21): Show c.-4495_-4494insCGCCTCTCCC	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4453		chr17	TogoVar
CD302_chr2_159763628_159803208	159764255	T T	TGTGTGCG others(3): Show TGTGTGCGCGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp2 NA18948.hp1 NA18961.hp1 HG03195.hp2 NA18948.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0227 a0001c0001t0003g0357 a0001c0001t0003g0362 a0001c0001t0003g0227 a0001c0001t0003g0357 a0001c0001t0003g0362	3	414	0.0073	10	c.75 others(21): Show c.7595_*7596insGCGCGCACAC	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding		4372		chr2	TogoVar
CD302_chr2_159763628_159803208	159764259	C C	CGCGCGCG others(3): Show CGCGCGCGCAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0023 a0001c0001t0024g0023	1	414	0.0024	10	c.75 others(21): Show c.7591_*7592insCTGCGCGCGC	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding		4368		chr2	TogoVar
CD302_chr2_159763628_159803208	159769643	C C	CATATATA others(3): Show CATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0215 a0001c0001t0035g0215	1	414	0.0024	10	c.21 others(21): Show c.2198_*2207dupATATATATAT	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	6/6	2207		chr2	TogoVar
CD302_chr2_159763628_159803208	159792422	C C	CTGTGTGT others(3): Show CTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02486.hp2 HG02738.hp1 others(4): Show HG00558.hp2 HG02486.hp2 HG02738.hp1 HG02965.hp2 HG03490.hp1 NA19000.hp2 NA19002.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0012 a0001c0002t0002 a0001c0002t0012	a0001c0002t0002g0134 a0001c0002t0002g0137 a0001c0002t0002g0148 others(4): Show a0001c0002t0002g0134 a0001c0002t0002g0137 a0001c0002t0002g0148 a0001c0002t0002g0149 a0001c0002t0002g0186 a0001c0002t0002g0236 a0001c0002t0012g0127	7	414	0.0169	10	c.67+ others(25): Show c.67+5700_67+5709dupCACACACACA	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	1/5			chr2	TogoVar
CD302_chr2_159763628_159803208	159794269	C C	CAATAAAA others(3): Show CAATAAAATAA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00673.hp2 HG01106.hp1 others(10): Show HG00408.hp2 HG00673.hp2 HG01106.hp1 HG02109.hp1 HG02132.hp2 HG02683.hp2 HG03098.hp1 NA18949.hp1 NA18988.hp1 NA19004.hp2 NA19060.hp1 NA19083.hp2 NA19086.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0003 a0003c0006 a0001c0002 a0002c0003 a0003c0006	a0001c0002t0002 a0001c0002t0027 a0002c0003t0010 others(1): Show a0001c0002t0002 a0001c0002t0027 a0002c0003t0010 a0003c0006t0002	a0001c0002t0002g0138 a0001c0002t0002g0139 a0001c0002t0002g0141 others(10): Show a0001c0002t0002g0138 a0001c0002t0002g0139 a0001c0002t0002g0141 a0001c0002t0002g0142 a0001c0002t0002g0143 a0001c0002t0002g0144 a0001c0002t0002g0145 a0001c0002t0002g0146 a0001c0002t0002g0147 a0001c0002t0002g0233 a0001c0002t0027g0030 a0002c0003t0010g0261 a0003c0006t0002g0122	13	414	0.0314	10	c.67+ others(25): Show c.67+3853_67+3862dupTTATTTTATT	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	1/5			chr2	TogoVar
CD320_chr19_8297127_8313358	8299186	C C	CCAAAAAA others(3): Show CCAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	390	0.0026	10	c.32 others(21): Show c.3276_*3277insTTTTTTTTTG	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		2940		chr19	TogoVar
CD320_chr19_8297127_8313358	8299652	T T	TCACACAC others(3): Show TCACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG01943.hp1 HG03490.hp1 others(5): Show HG00099.hp1 HG01943.hp1 HG03490.hp1 HG03492.hp1 NA18946.hp1 NA18949.hp2 NA18970.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	8	390	0.0205	10	c.28 others(21): Show c.2810_*2811insTGTGTGTGTG	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		2474		chr19	TogoVar
CD320_chr19_8297127_8313358	8313003	G G	GCGGCTGT others(3): Show GCGGCTGTGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	390	0.0026	10	c.-47 others(21): Show c.-4714_-4713insGCCACAGCCG	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		4646		chr19	TogoVar
CD36_chr7_80633642_80684274	80647258	C C	CTGTGTGT others(3): Show CTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01361.hp1 HG02486.hp2 others(4): Show HG01099.hp1 HG01361.hp1 HG02486.hp2 HG02523.hp1 HG03195.hp1 HG03209.hp2 NA18963.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0013 a0001c0001 a0009c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0001t0019 a0001c0001t0035 a0009c0013t0051	a0001c0001t0001g0127 a0001c0001t0003g0125 a0001c0001t0003g0126 others(4): Show a0001c0001t0001g0127 a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0011g0283 a0001c0001t0019g0282 a0001c0001t0035g0285 a0009c0013t0051g0284	7	392	0.0179	10	c.120 others(25): Show c.120+414_120+423dupGTGTGTGTGT	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CD36_chr7_80633642_80684274	80683296	G G	GTATATAT others(3): Show GTATATATACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00621.hp2 others(3): Show HG00099.hp2 HG00140.hp2 HG00621.hp2 HG02615.hp1 HG06807.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0040 a0001c0001t0001 a0001c0001t0008 a0001c0001t0040	a0001c0001t0001g0029 a0001c0001t0001g0056 a0001c0001t0001g0141 others(3): Show a0001c0001t0001g0029 a0001c0001t0001g0056 a0001c0001t0001g0141 a0001c0001t0008g0203 a0001c0001t0008g0232 a0001c0001t0040g0029	6	392	0.0153	10	c.69 others(21): Show c.6913_*6914insTATATATACA	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding		4023		chr7	TogoVar
CD36_chr7_80633642_80684274	80683318	G G	GTATATAT others(3): Show GTATATATACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00609.hp2 others(52): Show HG00099.hp2 HG00140.hp2 HG00609.hp2 HG00733.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01106.hp2 HG01109.hp2 HG01168.hp1 HG01175.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01358.hp2 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01928.hp2 HG01934.hp2 HG01978.hp1 HG01981.hp2 HG02040.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02148.hp2 HG02273.hp1 HG02300.hp2 HG02602.hp2 HG02615.hp1 HG02683.hp1 HG02683.hp2 HG02886.hp2 HG03239.hp1 HG03492.hp1 HG03669.hp1 HG03710.hp2 HG04199.hp1 HG06807.hp1 NA18951.hp2 NA18963.hp2 NA18964.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp2 NA18983.hp2 NA19066.hp2 NA19068.hp1 NA19086.hp2 NA20752.hp1 NA20805.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0004 a0007c0011 a0001c0001 a0001c0004 a0007c0011	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0017 a0001c0001t0018 a0001c0001t0023 a0001c0001t0040 a0001c0001t0056 a0001c0004t0001 a0007c0011t0001	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0016 others(45): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0081 a0001c0001t0001g0098 a0001c0001t0001g0104 a0001c0001t0001g0117 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0161 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0185 a0001c0001t0001g0193 a0001c0001t0001g0290 a0001c0001t0005g0265 a0001c0001t0006g0002 a0001c0001t0006g0067 a0001c0001t0008g0040 a0001c0001t0008g0197 a0001c0001t0008g0214 a0001c0001t0008g0218 a0001c0001t0008g0223 a0001c0001t0008g0232 a0001c0001t0008g0256 a0001c0001t0008g0263 a0001c0001t0008g0266 a0001c0001t0017g0002 a0001c0001t0017g0077 a0001c0001t0018g0008 a0001c0001t0018g0051 a0001c0001t0018g0167 a0001c0001t0023g0008 a0001c0001t0040g0029 a0001c0001t0056g0137 a0001c0004t0001g0035 a0001c0004t0001g0188 a0007c0011t0001g0192	55	392	0.1403	10	c.69 others(21): Show c.6935_*6936insTATATATACA	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding		4045		chr7	TogoVar
CD38_chr4_15773328_15858232	15802491	G G	GTTTTATT others(3): Show GTTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00735.hp2 others(30): Show HG00140.hp2 HG00280.hp2 HG00735.hp2 HG00738.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01515.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02055.hp2 HG02071.hp1 HG02129.hp1 HG02145.hp2 HG02148.hp2 HG02165.hp1 HG02486.hp1 HG03130.hp1 HG03654.hp1 HG03927.hp2 HG04228.hp1 NA18965.hp1 NA18980.hp1 NA18986.hp1 NA18999.hp2 NA19009.hp1 NA19080.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013 a0001c0001t0021 a0001c0001t0025 a0001c0001t0032 a0001c0001t0054 a0001c0001t0057 a0001c0001t0058	a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0242 others(30): Show a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0246 a0001c0001t0001g0249 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0287 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0310 a0001c0001t0003g0248 a0001c0001t0003g0251 a0001c0001t0003g0272 a0001c0001t0003g0308 a0001c0001t0003g0309 a0001c0001t0003g0322 a0001c0001t0004g0218 a0001c0001t0004g0219 a0001c0001t0004g0229 a0001c0001t0004g0307 a0001c0001t0004g0321 a0001c0001t0013g0290 a0001c0001t0021g0055 a0001c0001t0021g0234 a0001c0001t0025g0048 a0001c0001t0032g0326 a0001c0001t0054g0244 a0001c0001t0057g0302 a0001c0001t0058g0301	33	344	0.0959	10	c.234 others(29): Show c.234-13966_234-13957dupTATTTTATTT	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15826459	G G	GCACGCAC others(3): Show GCACGCACACA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02896.hp2 HG03098.hp2 HG01255.hp2 HG02896.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0022 a0001c0001t0002 a0001c0001t0004 a0001c0001t0022	a0001c0001t0002g0020 a0001c0001t0004g0064 a0001c0001t0022g0045 a0001c0001t0002g0020 a0001c0001t0004g0064 a0001c0001t0022g0045	3	344	0.0087	10	c.499 others(27): Show c.499+1446_499+1447insGCACACACAC	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15826459	G G	GCACGCGC others(3): Show GCACGCGCACA	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02083.hp1 HG03471.hp1 others(5): Show HG02074.hp2 HG02083.hp1 HG03471.hp1 NA18906.hp1 NA18943.hp1 NA18999.hp1 NA19064.hp1 NA19079.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 others(2): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0029	a0001c0002t0001g0092 a0001c0002t0002g0083 a0001c0002t0003g0079 others(5): Show a0001c0002t0001g0092 a0001c0002t0002g0083 a0001c0002t0003g0079 a0001c0002t0003g0154 a0001c0002t0005g0088 a0001c0002t0005g0095 a0001c0002t0029g0163 a0001c0002t0029g0164	8	344	0.0233	10	c.499 others(27): Show c.499+1446_499+1447insGCGCACACAC	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15847564	A A	AAAAAATA others(3): Show AAAAAATAAAT	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA18906.hp2 NA19030.hp1 HG03486.hp2 NA18906.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0036 a0001c0001t0020 a0001c0001t0036	a0001c0001t0020g0157 a0001c0001t0020g0179 a0001c0001t0036g0160 a0001c0001t0020g0157 a0001c0001t0020g0179 a0001c0001t0036g0160	3	344	0.0087	10	c.840 others(25): Show c.840-972_840-971insAATAAATAAA	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15847595	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02630.hp2 HG03041.hp1 others(1): Show HG02572.hp1 HG02630.hp2 HG03041.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0015 a0001c0001t0022 others(1): Show a0001c0001t0004 a0001c0001t0015 a0001c0001t0022 a0001c0001t0064	a0001c0001t0004g0056 a0001c0001t0015g0070 a0001c0001t0022g0045 others(1): Show a0001c0001t0004g0056 a0001c0001t0015g0070 a0001c0001t0022g0045 a0001c0001t0064g0029	4	344	0.0116	10	c.840 others(25): Show c.840-925_840-916dupAAAAAAAAAA	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD3G_chr11_118339344_118360161	118350889	G G	GAAAAAAA others(3): Show GAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0114 a0001c0001t0009g0114	1	442	0.0023	10	c.439 others(25): Show c.439+211_439+220dupAAAAAAAAAA	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD3G_chr11_118339344_118360161	118355556	C C	CATATACA others(3): Show CATATACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0014 a0001c0001t0032g0014	1	442	0.0023	10	c.24 others(21): Show c.2456_*2457insATATACACAT	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		396		chr11	TogoVar
CD3G_chr11_118339344_118360161	118355654	C C	CATATACA others(3): Show CATATACACAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0111 a0001c0001t0003g0111	1	442	0.0023	10	c.25 others(21): Show c.2554_*2555insATATACACAT	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		494		chr11	TogoVar
CD40LG_chrX_136643158_136665390	136660105	A A	AACACACA others(3): Show AACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02897.hp1 HG06807.hp1 HG02897.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0008 a0001c0001t0032g0014 a0001c0001t0032g0008 a0001c0001t0032g0014	2	287	0.0070	10	c.73 others(19): Show c.734_*743dupCACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	TogoVar
CD40LG_chrX_136643158_136665390	136660109	C C	CACACACA others(3): Show CACACACATAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02257.hp1 HG02630.hp1 HG02647.hp1 others(9): Show HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02976.hp2 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0015 a0001c0001t0011 a0001c0001t0015	a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059	12	287	0.0418	10	c.70 others(19): Show c.701_*702insTAAACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	TogoVar
CD40_chr20_46113314_46134858	46124751	G G	GTTTTTTT others(3): Show GTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	416	0.0024	10	c.497 others(27): Show c.497+1556_497+1565dupTTTTTTTTTT	CD40	ENSG00000101017.15	transcript	ENST00000372285.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr20	TogoVar
CD40_chr20_46113314_46134858	46125133	T T	TGTGACCC others(3): Show TGTGACCCTCA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	416	0.0024	10	c.498 others(27): Show c.498-1506_498-1497dupGTGACCCTCA	CD40	ENSG00000101017.15	transcript	ENST00000372285.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr20	TogoVar
CD4_chr12_6784528_6825799	6788362	G G	GTTTTCTT others(3): Show GTTTTCTTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp2 HG03486.hp1 HG03486.hp2	a0002 a0002	a0002c0003 a0002c0011 a0002c0003 a0002c0011	a0002c0003t0001 a0002c0011t0001 a0002c0003t0001 a0002c0011t0001	a0002c0003t0001g0420 a0002c0011t0001g0419 a0002c0003t0001g0420 a0002c0011t0001g0419	2	442	0.0045	10	c.-13 others(21): Show c.-1368_-1367insTTTTCTTTTC	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding		1165		chr12	TogoVar
CD4_chr12_6784528_6825799	6794775	G G	GTTTTTTT others(3): Show GTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01081.hp1 HG01192.hp1 others(29): Show HG00140.hp2 HG01081.hp1 HG01192.hp1 HG01515.hp1 HG01517.hp1 HG02015.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02258.hp1 HG02572.hp2 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02895.hp1 HG02976.hp1 HG03017.hp2 HG03540.hp1 HG03654.hp1 HG03710.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA19010.hp2 NA19012.hp2 NA19055.hp2 NA19084.hp2 NA21309.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0012	a0001c0001 a0001c0002 a0001c0004 others(5): Show a0001c0001 a0001c0002 a0001c0004 a0001c0018 a0002c0003 a0004c0007 a0006c0013 a0012c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0015 a0001c0002t0003 a0001c0004t0006 a0001c0018t0002 a0002c0003t0001 a0002c0003t0005 a0004c0007t0004 a0006c0013t0009 a0012c0019t0004	a0001c0001t0001g0122 a0001c0001t0001g0162 a0001c0001t0001g0228 others(28): Show a0001c0001t0001g0122 a0001c0001t0001g0162 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0248 a0001c0001t0001g0262 a0001c0001t0002g0181 a0001c0001t0002g0184 a0001c0001t0004g0003 a0001c0001t0004g0143 a0001c0001t0004g0145 a0001c0001t0004g0159 a0001c0001t0004g0180 a0001c0001t0004g0196 a0001c0001t0004g0226 a0001c0001t0004g0254 a0001c0001t0015g0247 a0001c0002t0003g0150 a0001c0002t0003g0194 a0001c0002t0003g0195 a0001c0002t0003g0197 a0001c0002t0003g0198 a0001c0002t0003g0199 a0001c0002t0003g0225 a0001c0004t0006g0148 a0001c0018t0002g0156 a0002c0003t0001g0253 a0002c0003t0005g0026 a0004c0007t0004g0227 a0006c0013t0009g0158 a0012c0019t0004g0070	32	442	0.0724	10	c.-68 others(27): Show c.-68+5114_-68+5123dupTTTTTTTTTT	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
CD4_chr12_6784528_6825799	6808450	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02976.hp1 others(1): Show HG02896.hp2 HG02897.hp2 HG02976.hp1 NA20129.hp1	a0002 a0002	a0002c0003 a0002c0011 a0002c0003 a0002c0011	a0002c0003t0005 a0002c0011t0005 a0002c0003t0005 a0002c0011t0005	a0002c0003t0005g0026 a0002c0003t0005g0029 a0002c0003t0005g0030 others(1): Show a0002c0003t0005g0026 a0002c0003t0005g0029 a0002c0003t0005g0030 a0002c0011t0005g0418	4	442	0.0091	10	c.215 others(27): Show c.215-5669_215-5660dupAAAAAAAAAA	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
CD4_chr12_6784528_6825799	6812769	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18995.hp1 NA19082.hp2 NA18995.hp1 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0062 a0001c0001t0004g0126 a0001c0001t0004g0062 a0001c0001t0004g0126	2	442	0.0045	10	c.215 others(27): Show c.215-1372_215-1371insGTGTGTGTGT	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr12	TogoVar
CD4_chr12_6784528_6825799	6820855	T T	TGTGAGAG others(3): Show TGTGAGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp1 NA18944.hp2 NA19002.hp1 others(1): Show HG03540.hp1 NA18944.hp2 NA19002.hp1 NA19072.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0018 a0002c0003 a0001c0001 a0001c0018 a0002c0003	a0001c0001t0002 a0001c0018t0002 a0002c0003t0002 a0001c0001t0002 a0001c0018t0002 a0002c0003t0002	a0001c0001t0002g0119 a0001c0018t0002g0156 a0002c0003t0002g0001 a0001c0001t0002g0119 a0001c0018t0002g0156 a0002c0003t0002g0001	4	442	0.0091	10	c.15 others(21): Show c.1526_*1527insGTGAGAGAGA	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding		57		chr12	TogoVar
CD4_chr12_6784528_6825799	6820855	T T	TGTGTGAG others(3): Show TGTGTGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00438.hp1 others(21): Show HG00280.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp1 HG00621.hp1 HG01123.hp1 HG01175.hp1 HG01361.hp1 HG01943.hp2 HG02027.hp2 NA18948.hp1 NA18950.hp1 NA18956.hp1 NA18960.hp1 NA18962.hp2 NA18970.hp1 NA18971.hp2 NA18974.hp1 NA18977.hp2 NA19012.hp1 NA19059.hp1 NA19070.hp1 NA19084.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0046 a0001c0001t0002g0057 others(21): Show a0001c0001t0002g0005 a0001c0001t0002g0046 a0001c0001t0002g0057 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0072 a0001c0001t0002g0086 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0094 a0001c0001t0002g0099 a0001c0001t0002g0125 a0001c0001t0002g0134 a0001c0001t0002g0141 a0001c0001t0002g0175 a0001c0001t0002g0181 a0001c0001t0002g0213 a0001c0001t0002g0261 a0001c0001t0002g0274 a0001c0001t0002g0282 a0001c0001t0002g0383 a0001c0001t0002g0395 a0001c0001t0002g0407	24	442	0.0543	10	c.15 others(21): Show c.1526_*1527insGTGTGAGAGA	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding		57		chr12	TogoVar
CD4_chr12_6784528_6825799	6820855	T T	TGTGTGTG others(3): Show TGTGTGTGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG00735.hp1 HG01070.hp1 others(8): Show HG00642.hp1 HG00735.hp1 HG01070.hp1 HG01099.hp1 HG01099.hp2 HG01123.hp2 HG02486.hp2 HG02622.hp2 HG02735.hp2 HG03490.hp1 HG03942.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0002t0003 a0002c0003t0002 a0001c0001t0002 a0001c0002t0003 a0002c0003t0002	a0001c0001t0002g0350 a0001c0002t0003g0194 a0001c0002t0003g0231 others(8): Show a0001c0001t0002g0350 a0001c0002t0003g0194 a0001c0002t0003g0231 a0001c0002t0003g0307 a0001c0002t0003g0326 a0001c0002t0003g0329 a0001c0002t0003g0331 a0001c0002t0003g0339 a0001c0002t0003g0340 a0001c0002t0003g0351 a0002c0003t0002g0032	11	442	0.0249	10	c.15 others(21): Show c.1526_*1527insGTGTGTGAGA	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding		57		chr12	TogoVar
CD4_chr12_6784528_6825799	6820855	T T	TGTGTGTG others(3): Show TGTGTGTGTGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0258 a0001c0002t0003g0258	1	442	0.0023	10	c.15 others(21): Show c.1526_*1527insGTGTGTGTGA	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding		57		chr12	TogoVar
CD53_chr1_110868148_110904922	110871814	T T	TACACACA others(3): Show TACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00597.hp1 HG01099.hp1 others(15): Show HG00099.hp2 HG00597.hp1 HG01099.hp1 HG01167.hp1 HG01361.hp1 HG01891.hp1 HG03239.hp2 HG03654.hp2 HG03927.hp2 NA18747.hp1 NA18959.hp2 NA18969.hp1 NA18975.hp1 NA18980.hp2 NA18983.hp1 NA19091.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0004t0011	a0001c0001t0001g0012 a0001c0001t0001g0066 a0001c0001t0001g0182 others(11): Show a0001c0001t0001g0012 a0001c0001t0001g0066 a0001c0001t0001g0182 a0001c0001t0002g0001 a0001c0001t0002g0011 a0001c0001t0002g0034 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0113 a0001c0001t0005g0002 a0001c0001t0005g0005 a0001c0001t0005g0035 a0001c0001t0005g0096 a0001c0004t0011g0177	18	442	0.0407	10	c.-14 others(21): Show c.-1452_-1451insACACACACAC	CD53	ENSG00000143119.14	transcript	ENST00000271324.6	protein_coding		1333		chr1	TogoVar
CD53_chr1_110868148_110904922	110886846	A A	AAGATATA others(3): Show AAGATATATAT	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0228 a0001c0001t0003g0228	1	442	0.0023	10	c.-17 others(27): Show c.-17-4545_-17-4544insGATATATATA	CD53	ENSG00000143119.14	transcript	ENST00000271324.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD53_chr1_110868148_110904922	110886869	A A	ATATATAT others(3): Show ATATATATTTT	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01516.hp2 NA18943.hp1 others(4): Show HG00544.hp2 HG01516.hp2 NA18943.hp1 NA18987.hp2 NA18997.hp2 NA19072.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0013 a0001c0001t0001 a0001c0001t0003 a0001c0001t0013	a0001c0001t0001g0017 a0001c0001t0003g0210 a0001c0001t0003g0230 others(1): Show a0001c0001t0001g0017 a0001c0001t0003g0210 a0001c0001t0003g0230 a0001c0001t0013g0168	7	442	0.0158	10	c.-17 others(27): Show c.-17-4522_-17-4521insATATATTTTT	CD53	ENSG00000143119.14	transcript	ENST00000271324.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD53_chr1_110868148_110904922	110886869	A A	ATATATTT others(3): Show ATATATTTTTT	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19083.hp2 NA19078.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	2	442	0.0045	10	c.-17 others(27): Show c.-17-4522_-17-4521insATATTTTTTT	CD53	ENSG00000143119.14	transcript	ENST00000271324.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD53_chr1_110868148_110904922	110887058	G G	GTTTATTT others(3): Show GTTTATTTTAT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0225 a0001c0001t0003g0225	1	442	0.0023	10	c.-17 others(27): Show c.-17-4320_-17-4311dupATTTTATTTT	CD53	ENSG00000143119.14	transcript	ENST00000271324.6	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD58_chr1_116509534_116576026	116567177	A A	AGAAGGGA others(3): Show AGAAGGGAAGG	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01358.hp1 HG01433.hp2 others(3): Show HG01257.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 NA20752.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0069 a0001c0001t0001g0070 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0090 a0001c0001t0001g0203	6	288	0.0208	10	c.70+ others(25): Show c.70+3716_70+3725dupCCTTCCCTTC	CD58	ENSG00000116815.16	transcript	ENST00000369489.10	protein_coding	1/5			chr1	TogoVar
CD59_chr11_33698010_33741423	33701754	A A	AGTGTGTG others(3): Show AGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp2 HG01884.hp1 HG02145.hp2 others(7): Show HG01496.hp2 HG01884.hp1 HG02145.hp2 HG02622.hp1 HG02717.hp1 HG03139.hp1 HG03453.hp2 NA18522.hp1 NA19043.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0020 a0001c0001t0073 a0001c0001t0008 a0001c0001t0020 a0001c0001t0073	a0001c0001t0008g0007 a0001c0001t0008g0056 a0001c0001t0008g0109 others(3): Show a0001c0001t0008g0007 a0001c0001t0008g0056 a0001c0001t0008g0109 a0001c0001t0020g0025 a0001c0001t0020g0050 a0001c0001t0073g0057	10	380	0.0263	10	c.83 others(21): Show c.8371_*8372insACACACACAC	CD59	ENSG00000085063.18	transcript	ENST00000642928.2	protein_coding		1255		chr11	TogoVar
CD68_chr17_7574638_7587111	7574876	C C	CCTTATTG others(3): Show CCTTATTGCAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0001 a0001c0001t0008g0001	1	434	0.0023	10	c.-48 others(21): Show c.-4802_-4801insCTTATTGCAT	CD68	ENSG00000129226.14	transcript	ENST00000250092.11	protein_coding		4761		chr17	TogoVar
CD6_chr11_60966680_61025377	60994457	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01106.hp1 HG01175.hp2 others(17): Show HG00423.hp1 HG01106.hp1 HG01175.hp2 HG01361.hp2 HG02056.hp2 HG02080.hp1 HG02630.hp1 HG02738.hp1 HG03704.hp1 HG04184.hp1 HG04199.hp2 HG04228.hp2 NA18940.hp1 NA18940.hp2 NA18985.hp1 NA18998.hp1 NA19070.hp1 NA19088.hp1 NA19091.hp2 NA20905.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0019 a0008c0013 a0001c0001 a0001c0019 a0008c0013	a0001c0001t0001 a0001c0001t0007 a0001c0019t0013 others(1): Show a0001c0001t0001 a0001c0001t0007 a0001c0019t0013 a0008c0013t0001	a0001c0001t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0083 others(17): Show a0001c0001t0001g0060 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0152 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0211 a0001c0001t0007g0040 a0001c0019t0013g0137 a0008c0013t0001g0112 a0008c0013t0001g0143	20	302	0.0662	10	c.50- others(27): Show c.50-12112_50-12103dupAAAAAAAAAA	CD6	ENSG00000013725.14	transcript	ENST00000313421.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD6_chr11_60966680_61025377	61002954	C C	CTCTTTTC others(3): Show CTCTTTTCTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp2 others(73): Show HG00099.hp1 HG00140.hp1 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00673.hp2 HG00741.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG02074.hp1 HG02080.hp1 HG02129.hp2 HG02132.hp1 HG02293.hp1 HG02300.hp2 HG02683.hp2 HG02738.hp1 HG02886.hp2 HG03491.hp1 HG03654.hp1 HG03704.hp1 HG04184.hp1 HG04199.hp2 HG04228.hp2 HG06807.hp1 NA18747.hp1 NA18940.hp1 NA18940.hp2 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18960.hp1 NA18966.hp1 NA18966.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18982.hp1 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18990.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19057.hp1 NA19068.hp2 NA19070.hp1 NA19081.hp2 NA19085.hp2 NA19091.hp2 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0018 a0001c0019 others(3): Show a0001c0001 a0001c0018 a0001c0019 a0002c0002 a0003c0005 a0008c0013	a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 others(5): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0009 a0001c0018t0001 a0001c0019t0013 a0002c0002t0001 a0003c0005t0001 a0008c0013t0001	a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0019 others(70): Show a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0121 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0254 a0001c0001t0001g0261 a0001c0001t0008g0269 a0001c0001t0009g0176 a0001c0018t0001g0149 a0001c0019t0013g0137 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0194 a0003c0005t0001g0250 a0008c0013t0001g0112 a0008c0013t0001g0145	76	302	0.2517	10	c.50- others(25): Show c.50-3603_50-3594dupCTTTTCTTTT	CD6	ENSG00000013725.14	transcript	ENST00000313421.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD6_chr11_60966680_61025377	61002977	T T	TTTTCTTT others(3): Show TTTTCTTTTCC	intron_variant intron_variant	MODIFIER	NA19088.hp1 NA19088.hp1	a0008 a0008	a0008c0013 a0008c0013	a0008c0013t0001 a0008c0013t0001	a0008c0013t0001g0143 a0008c0013t0001g0143	1	302	0.0033	10	c.50- others(25): Show c.50-3594_50-3593insCTTTTCCTTT	CD6	ENSG00000013725.14	transcript	ENST00000313421.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD6_chr11_60966680_61025377	61011178	C C	CGTGTGTG others(3): Show CGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp2 HG00735.hp1 others(41): Show HG00099.hp2 HG00438.hp2 HG00735.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01346.hp1 HG01891.hp1 HG01891.hp2 HG02129.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02486.hp2 HG02622.hp2 HG02647.hp2 HG02698.hp2 HG02717.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03688.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 NA18522.hp1 NA18947.hp1 NA18990.hp2 NA19030.hp1 NA19063.hp2 NA20300.hp1 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0012	a0001c0001 a0002c0002 a0002c0003 others(4): Show a0001c0001 a0002c0002 a0002c0003 a0002c0009 a0003c0005 a0003c0011 a0012c0017	a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 a0002c0003t0001 a0002c0009t0001 a0003c0005t0001 a0003c0011t0001 a0003c0011t0004 a0012c0017t0001	a0001c0001t0001g0079 a0001c0001t0009g0176 a0002c0002t0001g0037 others(37): Show a0001c0001t0001g0079 a0001c0001t0009g0176 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0082 a0002c0002t0001g0084 a0002c0002t0001g0102 a0002c0002t0001g0205 a0002c0003t0001g0002 a0002c0003t0001g0004 a0002c0003t0001g0007 a0002c0003t0001g0011 a0002c0003t0001g0021 a0002c0003t0001g0022 a0002c0003t0001g0030 a0002c0003t0001g0036 a0002c0003t0001g0041 a0002c0003t0001g0059 a0002c0003t0001g0103 a0002c0003t0001g0124 a0002c0003t0001g0135 a0002c0003t0001g0169 a0002c0003t0001g0183 a0002c0003t0001g0204 a0002c0003t0001g0214 a0002c0003t0001g0216 a0002c0003t0001g0217 a0002c0003t0001g0218 a0002c0003t0001g0219 a0002c0003t0001g0221 a0002c0003t0001g0236 a0002c0003t0001g0243 a0002c0009t0001g0023 a0003c0005t0001g0162 a0003c0005t0001g0187 a0003c0011t0001g0227 a0003c0011t0004g0044 a0003c0011t0004g0045 a0003c0011t0004g0279 a0012c0017t0001g0215	44	302	0.1457	10	c.115 others(25): Show c.1150+60_1150+69dupGTGTGTGTGT	CD6	ENSG00000013725.14	transcript	ENST00000313421.11	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD6_chr11_60966680_61025377	61020461	A A	ATGTGTGT others(3): Show ATGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG02717.hp1 HG03130.hp1 others(2): Show HG01109.hp2 HG02717.hp1 HG03130.hp1 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0007 a0001c0010 a0001c0007 a0001c0010	a0001c0007t0002 a0001c0010t0002 a0001c0007t0002 a0001c0010t0002	a0001c0007t0002g0258 a0001c0010t0002g0014 a0001c0010t0002g0133 others(1): Show a0001c0007t0002g0258 a0001c0010t0002g0014 a0001c0010t0002g0133 a0001c0010t0002g0234	5	302	0.0166	10	c.11 others(21): Show c.1143_*1144insTGTGTGTGTG	CD6	ENSG00000013725.14	transcript	ENST00000313421.11	protein_coding		85		chr11	TogoVar
CD70_chr19_6580839_6596150	6588076	A A	ACACACCT others(3): Show ACACACCTCCC	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0051 a0001c0002t0001g0051	1	456	0.0022	10	c.197 others(27): Show c.197-1672_197-1671insGGGAGGTGTG	CD70	ENSG00000125726.11	transcript	ENST00000245903.4	protein_coding	2/2			chr19	TogoVar
CD74_chr5_150396639_150417910	150407740	T T	TTTTTGTT others(3): Show TTTTTGTTTTG	intron_variant intron_variant	MODIFIER	HG02622.hp2 NA19043.hp1 HG02622.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0006 a0001c0007t0006 a0001c0001t0006 a0001c0007t0006	a0001c0001t0006g0131 a0001c0007t0006g0102 a0001c0001t0006g0131 a0001c0007t0006g0102	2	408	0.0049	10	c.126 others(25): Show c.126-426_126-417dupCAAAACAAAA	CD74	ENSG00000019582.17	transcript	ENST00000009530.13	protein_coding	1/8			chr5	TogoVar
CD79A_chr19_41872279_41886372	41875627	C C	CCTAAGCA others(3): Show CCTAAGCAGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	392	0.0026	10	c.-16 others(21): Show c.-1678_-1677insCTAAGCAGCG	CD79A	ENSG00000105369.10	transcript	ENST00000221972.8	protein_coding		1651		chr19	TogoVar

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