Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHD1L_chr1_147237684_147300762	147288322	C C	CATAAAAA others(3): Show CATAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0328 a0001c0001t0001g0328	1	418	0.0024	10	c.232 others(27): Show c.2320+590_2320+591insTAAAAAAAAA	CHD1L	ENSG00000131778.20	transcript	ENST00000369258.8	protein_coding	19/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
CHD1L_chr1_147237684_147300762	147288346	A A	AAAAAAAA others(3): Show AAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0001 a0005c0008t0001	a0005c0008t0001g0189 a0005c0008t0001g0189	1	418	0.0024	10	c.232 others(27): Show c.2320+613_2320+614insAAAAAAAAAG	CHD1L	ENSG00000131778.20	transcript	ENST00000369258.8	protein_coding	19/22			chr1	TogoVar
CHD1L_chr1_147237684_147300762	147299000	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03579.hp1 HG03579.hp2 HG03579.hp1 HG03579.hp2	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0001 a0005c0008t0001	a0005c0008t0001g0034 a0005c0008t0001g0189 a0005c0008t0001g0034 a0005c0008t0001g0189	2	418	0.0048	10	c.34 others(21): Show c.3491_*3492insTTTTTTTTTT	CHD1L	ENSG00000131778.20	transcript	ENST00000369258.8	protein_coding		3239		chr1	TogoVar
CHD1L_chr1_147237684_147300762	147300012	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp1 HG00738.hp2 HG01261.hp2 others(22): Show HG00408.hp1 HG00738.hp2 HG01261.hp2 HG02129.hp1 HG02257.hp1 HG02630.hp1 HG02683.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp2 HG03130.hp2 HG03239.hp1 HG03831.hp2 HG04184.hp2 HG04204.hp2 NA18939.hp2 NA18951.hp2 NA18972.hp1 NA19043.hp1 NA19077.hp1 NA19084.hp2 NA19240.hp1 NA20905.hp2 NA21309.hp2	a0003 a0004 a0003 a0004	a0003c0003 a0004c0005 a0003c0003 a0004c0005	a0003c0003t0002 a0004c0005t0002 a0003c0003t0002 a0004c0005t0002	a0003c0003t0002g0012 a0003c0003t0002g0030 a0003c0003t0002g0105 others(15): Show a0003c0003t0002g0012 a0003c0003t0002g0030 a0003c0003t0002g0105 a0003c0003t0002g0162 a0003c0003t0002g0180 a0003c0003t0002g0181 a0003c0003t0002g0184 a0003c0003t0002g0195 a0004c0005t0002g0003 a0004c0005t0002g0060 a0004c0005t0002g0061 a0004c0005t0002g0062 a0004c0005t0002g0063 a0004c0005t0002g0065 a0004c0005t0002g0066 a0004c0005t0002g0069 a0004c0005t0002g0071 a0004c0005t0002g0150	25	418	0.0598	10	c.45 others(21): Show c.4503_*4504insAAAAAAAAAA	CHD1L	ENSG00000131778.20	transcript	ENST00000369258.8	protein_coding		4251		chr1	TogoVar
CHD1_chr5_98848985_98934007	98911146	A A	AAAATATA others(3): Show AAAATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0054 a0001c0003t0006g0054	1	334	0.0030	10	c.54- others(25): Show c.54-6049_54-6048insATATATATTT	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98911146	A A	AATATATA others(3): Show AATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0062 a0001c0003t0006g0062	1	334	0.0030	10	c.54- others(25): Show c.54-6058_54-6049dupATATATATAT	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD1_chr5_98848985_98934007	98917299	C C	CCAAAAAA others(3): Show CCAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18946.hp1 NA18965.hp2 others(6): Show NA18944.hp1 NA18946.hp1 NA18965.hp2 NA18974.hp2 NA18981.hp2 NA18987.hp1 NA18988.hp1 NA19004.hp1 NA19081.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0003 a0002c0002t0002g0102 a0002c0002t0002g0103 others(5): Show a0002c0002t0002g0003 a0002c0002t0002g0102 a0002c0002t0002g0103 a0002c0002t0002g0104 a0002c0002t0002g0105 a0002c0002t0002g0106 a0002c0002t0002g0118 a0002c0002t0002g0192	9	334	0.0270	10	c.53+ others(25): Show c.53+9034_53+9035insTTTTTTTTTG	CHD1	ENSG00000153922.12	transcript	ENST00000614616.5	protein_coding	2/35			chr5	TogoVar
CHD2_chr15_92895324_93032996	92909939	C C	CGTGTGTG others(3): Show CGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0154 a0001c0005t0004g0154	1	306	0.0033	10	c.62+ others(25): Show c.62+8661_62+8670dupGTGTGTGTGT	CHD2	ENSG00000173575.24	transcript	ENST00000394196.9	protein_coding	2/38		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHD2_chr15_92895324_93032996	92932838	A A	ACCTCCGC others(3): Show ACCTCCGCCTC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	306	0.0033	10	c.443 others(27): Show c.443+3748_443+3749insCTCCGCCTCC	CHD2	ENSG00000173575.24	transcript	ENST00000394196.9	protein_coding	5/38		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHD2_chr15_92895324_93032996	92965565	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19065.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0010 a0001c0001t0009g0010	1	306	0.0033	10	c.200 others(29): Show c.2001-1739_2001-1730dupAAAAAAAAAA	CHD2	ENSG00000173575.24	transcript	ENST00000394196.9	protein_coding	16/38		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHD2_chr15_92895324_93032996	93016779	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp2 HG00639.hp1 others(60): Show HG00099.hp2 HG00423.hp2 HG00639.hp1 HG00642.hp2 HG00738.hp1 HG01070.hp2 HG01099.hp1 HG01123.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01346.hp2 HG01361.hp1 HG01433.hp2 HG01884.hp2 HG01943.hp2 HG01975.hp1 HG02004.hp1 HG02155.hp2 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02886.hp2 HG02976.hp2 HG03017.hp1 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03490.hp1 HG03492.hp1 HG03669.hp2 HG03710.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04228.hp1 NA18612.hp2 NA18939.hp2 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18953.hp2 NA18956.hp1 NA18959.hp1 NA18959.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18971.hp2 NA18978.hp2 NA18979.hp2 NA18983.hp1 NA19002.hp2 NA19007.hp1 NA19081.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19088.hp2 NA20129.hp2 NA20752.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0011 a0001c0015	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(19): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0008 a0001c0002t0009 a0001c0002t0011 a0001c0002t0016 a0001c0003t0003 a0001c0003t0008 a0001c0004t0004 a0001c0004t0007 a0001c0004t0010 a0001c0004t0017 a0001c0004t0018 a0001c0005t0004 a0001c0006t0004 a0001c0011t0001 a0001c0015t0005	a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0068 others(59): Show a0001c0001t0001g0016 a0001c0001t0001g0027 a0001c0001t0001g0068 a0001c0001t0001g0132 a0001c0001t0001g0141 a0001c0001t0001g0185 a0001c0001t0006g0248 a0001c0001t0008g0040 a0001c0002t0001g0091 a0001c0002t0001g0234 a0001c0002t0001g0235 a0001c0002t0001g0236 a0001c0002t0001g0237 a0001c0002t0001g0239 a0001c0002t0001g0240 a0001c0002t0001g0242 a0001c0002t0001g0244 a0001c0002t0001g0247 a0001c0002t0001g0249 a0001c0002t0001g0250 a0001c0002t0001g0251 a0001c0002t0001g0252 a0001c0002t0001g0253 a0001c0002t0001g0255 a0001c0002t0001g0258 a0001c0002t0001g0286 a0001c0002t0002g0156 a0001c0002t0002g0181 a0001c0002t0002g0275 a0001c0002t0003g0228 a0001c0002t0005g0224 a0001c0002t0005g0225 a0001c0002t0005g0229 a0001c0002t0005g0277 a0001c0002t0005g0279 a0001c0002t0008g0015 a0001c0002t0009g0022 a0001c0002t0011g0256 a0001c0002t0016g0280 a0001c0003t0003g0128 a0001c0003t0008g0147 a0001c0004t0004g0092 a0001c0004t0004g0284 a0001c0004t0004g0285 a0001c0004t0007g0013 a0001c0004t0007g0014 a0001c0004t0007g0017 a0001c0004t0007g0018 a0001c0004t0007g0020 a0001c0004t0007g0021 a0001c0004t0010g0105 a0001c0004t0010g0106 a0001c0004t0010g0107 a0001c0004t0010g0108 a0001c0004t0010g0109 a0001c0004t0010g0245 a0001c0004t0017g0019 a0001c0004t0018g0025 a0001c0005t0004g0153 a0001c0006t0004g0004 a0001c0011t0001g0024 a0001c0015t0005g0288	63	306	0.2059	10	c.490 others(29): Show c.4906+1876_4906+1885dupAAAAAAAAAA	CHD2	ENSG00000173575.24	transcript	ENST00000394196.9	protein_coding	37/38		INFO_REALIGN_3_PRIME	chr15	TogoVar
CHD3_chr17_7883789_7917755	7884446	T T	TTATATAT others(3): Show TTATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp2 NA19091.hp2 NA19062.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0166 a0001c0001t0001g0021 a0001c0001t0001g0166	2	366	0.0055	10	c.-45 others(21): Show c.-4555_-4554insTATATATATA	CHD3	ENSG00000170004.19	transcript	ENST00000330494.12	protein_coding		4342		chr17	TogoVar
CHD3_chr17_7883789_7917755	7884457	C C	CATATATA others(3): Show CATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp1 HG02071.hp1 NA18612.hp1 others(5): Show HG01928.hp1 HG02071.hp1 NA18612.hp1 NA18612.hp2 NA18979.hp2 NA18980.hp1 NA19007.hp2 NA19080.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0001c0008 others(1): Show a0001c0001 a0001c0006 a0001c0008 a0002c0002	a0001c0001t0001 a0001c0006t0001 a0001c0008t0001 others(1): Show a0001c0001t0001 a0001c0006t0001 a0001c0008t0001 a0002c0002t0001	a0001c0001t0001g0021 a0001c0001t0001g0087 a0001c0001t0001g0118 others(4): Show a0001c0001t0001g0021 a0001c0001t0001g0087 a0001c0001t0001g0118 a0001c0006t0001g0177 a0001c0008t0001g0049 a0002c0002t0001g0005 a0002c0002t0001g0047	8	366	0.0219	10	c.-45 others(21): Show c.-4544_-4543insATATATATAT	CHD3	ENSG00000170004.19	transcript	ENST00000330494.12	protein_coding		4331		chr17	TogoVar
CHD4_chr12_6565082_6612379	6580704	G G	GAAAAAAA others(3): Show GAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02717.hp1 HG02922.hp2 others(2): Show HG02451.hp1 HG02717.hp1 HG02922.hp2 HG02970.hp2 HG03195.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0258 a0001c0002t0002g0009 a0001c0002t0002g0081 a0001c0002t0001g0258 a0001c0002t0002g0009 a0001c0002t0002g0081	5	374	0.0134	10	c.490 others(27): Show c.4909+330_4909+339dupTTTTTTTTTT	CHD4	ENSG00000111642.16	transcript	ENST00000544040.7	protein_coding	33/39			chr12	TogoVar
CHD4_chr12_6565082_6612379	6610743	C C	CCCAGGAA others(3): Show CCCAGGAAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0215 a0002c0001t0001g0215	1	374	0.0027	10	c.-35 others(21): Show c.-3523_-3522insCTCTTCCTGG	CHD4	ENSG00000111642.16	transcript	ENST00000544040.7	protein_coding		3365		chr12	TogoVar
CHD5_chr1_6096787_6185321	6132880	T T	TTCTCTCT others(3): Show TTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp1 HG00438.hp1 others(51): Show HG00323.hp1 HG00408.hp1 HG00438.hp1 HG00738.hp2 HG01070.hp1 HG01106.hp2 HG01257.hp1 HG01934.hp2 HG02015.hp2 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02129.hp1 HG02155.hp2 HG02165.hp1 HG02602.hp2 HG02735.hp2 HG03017.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03942.hp2 HG04204.hp1 NA18747.hp1 NA18939.hp1 NA18943.hp1 NA18944.hp2 NA18945.hp2 NA18948.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18962.hp2 NA18963.hp2 NA18969.hp1 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18980.hp2 NA18983.hp1 NA18993.hp2 NA18998.hp1 NA19000.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19068.hp1 NA19081.hp1 NA19081.hp2 NA19088.hp2 NA19091.hp2 NA20752.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0004 others(5): Show a0001c0001 a0001c0003 a0001c0004 a0001c0007 a0001c0011 a0001c0015 a0001c0020 a0003c0018	a0001c0001t0003 a0001c0001t0007 a0001c0001t0038 others(16): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0038 a0001c0003t0002 a0001c0003t0008 a0001c0003t0010 a0001c0003t0015 a0001c0003t0022 a0001c0003t0046 a0001c0003t0047 a0001c0004t0003 a0001c0007t0003 a0001c0011t0008 a0001c0011t0010 a0001c0015t0002 a0001c0015t0006 a0001c0020t0002 a0003c0018t0002 a0003c0018t0015	a0001c0001t0003g0135 a0001c0001t0003g0176 a0001c0001t0003g0239 others(51): Show a0001c0001t0003g0135 a0001c0001t0003g0176 a0001c0001t0003g0239 a0001c0001t0007g0078 a0001c0001t0007g0237 a0001c0001t0007g0263 a0001c0001t0038g0006 a0001c0003t0002g0022 a0001c0003t0002g0070 a0001c0003t0002g0089 a0001c0003t0002g0090 a0001c0003t0002g0120 a0001c0003t0002g0121 a0001c0003t0002g0122 a0001c0003t0002g0128 a0001c0003t0002g0130 a0001c0003t0002g0152 a0001c0003t0002g0158 a0001c0003t0002g0187 a0001c0003t0002g0253 a0001c0003t0002g0256 a0001c0003t0002g0279 a0001c0003t0008g0053 a0001c0003t0008g0116 a0001c0003t0008g0119 a0001c0003t0008g0153 a0001c0003t0008g0155 a0001c0003t0008g0166 a0001c0003t0010g0040 a0001c0003t0010g0212 a0001c0003t0015g0157 a0001c0003t0015g0181 a0001c0003t0022g0192 a0001c0003t0022g0207 a0001c0003t0022g0220 a0001c0003t0046g0204 a0001c0003t0047g0175 a0001c0004t0003g0024 a0001c0007t0003g0067 a0001c0007t0003g0068 a0001c0007t0003g0284 a0001c0007t0003g0287 a0001c0011t0008g0208 a0001c0011t0010g0103 a0001c0011t0010g0148 a0001c0015t0002g0129 a0001c0015t0002g0169 a0001c0015t0002g0170 a0001c0015t0006g0102 a0001c0020t0002g0051 a0003c0018t0002g0167 a0003c0018t0002g0291 a0003c0018t0015g0186 a0003c0018t0015g0188	54	320	0.1688	10	c.314 others(29): Show c.3145-1142_3145-1133dupGAGAGAGAGA	CHD5	ENSG00000116254.18	transcript	ENST00000262450.8	protein_coding	20/41			chr1	TogoVar
CHD6_chr20_41397083_41623377	41419554	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02723.hp2 NA18974.hp1 others(2): Show HG01070.hp1 HG02723.hp2 NA18974.hp1 NA19081.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0008 a0001c0001t0001g0148 a0001c0001t0002g0076 others(2): Show a0001c0001t0001g0008 a0001c0001t0001g0148 a0001c0001t0002g0076 a0001c0001t0002g0220 a0001c0001t0005g0033	5	324	0.0154	10	c.612 others(27): Show c.6127+944_6127+953dupTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	31/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41431776	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03239.hp1 HG02698.hp1 HG03239.hp1	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0001 a0004c0013t0001	a0004c0013t0001g0001 a0004c0013t0001g0002 a0004c0013t0001g0001 a0004c0013t0001g0002	2	324	0.0062	10	c.406 others(29): Show c.4068+5488_4068+5497dupAAAAAAAAAA	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	27/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41432160	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01496.hp1 HG03239.hp1 others(1): Show HG00438.hp1 HG01496.hp1 HG03239.hp1 NA18522.hp1	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0002 a0004c0013 a0005c0007 a0001c0002 a0004c0013 a0005c0007	a0001c0002t0001 a0004c0013t0001 a0005c0007t0001 a0001c0002t0001 a0004c0013t0001 a0005c0007t0001	a0001c0002t0001g0185 a0001c0002t0001g0270 a0004c0013t0001g0001 others(1): Show a0001c0002t0001g0185 a0001c0002t0001g0270 a0004c0013t0001g0001 a0005c0007t0001g0322	4	324	0.0124	10	c.406 others(29): Show c.4068+5104_4068+5113dupTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	27/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41504077	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0321 a0001c0001t0001g0321	1	324	0.0031	10	c.853 others(27): Show c.853-4730_853-4721dupTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	5/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41559147	G G	GACACACA others(3): Show GACACACACAC	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03239.hp1 HG02698.hp1 HG03239.hp1	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0001 a0004c0013t0001	a0004c0013t0001g0001 a0004c0013t0001g0002 a0004c0013t0001g0001 a0004c0013t0001g0002	2	324	0.0062	10	c.-23 others(27): Show c.-23-7797_-23-7788dupGTGTGTGTGT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41579437	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01975.hp1 HG06807.hp1 NA18948.hp1 HG01975.hp1 HG06807.hp1 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0218 a0001c0002t0001g0177 a0001c0002t0001g0277 a0001c0001t0002g0218 a0001c0002t0001g0177 a0001c0002t0001g0277	3	324	0.0093	10	c.-23 others(29): Show c.-23-28087_-23-28078dupTTTTTTTTTT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41591375	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0019 a0019	a0019c0027 a0019c0027	a0019c0027t0001 a0019c0027t0001	a0019c0027t0001g0317 a0019c0027t0001g0317	1	324	0.0031	10	c.-24 others(29): Show c.-24+26964_-24+26965insGTGTGTGTGT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41591377	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02273.hp1 NA18975.hp1 others(1): Show HG02004.hp1 HG02273.hp1 NA18975.hp1 NA19063.hp1	a0002 a0007 a0002 a0007	a0002c0004 a0007c0012 a0002c0004 a0007c0012	a0002c0004t0004 a0007c0012t0004 a0002c0004t0004 a0007c0012t0004	a0002c0004t0004g0311 a0002c0004t0004g0312 a0007c0012t0004g0309 others(1): Show a0002c0004t0004g0311 a0002c0004t0004g0312 a0007c0012t0004g0309 a0007c0012t0004g0310	4	324	0.0124	10	c.-24 others(29): Show c.-24+26962_-24+26963insGTGTGTGTGT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41591379	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02559.hp2 HG00738.hp1 HG02559.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0001 a0004c0010t0001	a0004c0010t0001g0265 a0004c0010t0001g0266 a0004c0010t0001g0265 a0004c0010t0001g0266	2	324	0.0062	10	c.-24 others(29): Show c.-24+26951_-24+26960dupGTGTGTGTGT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD6_chr20_41397083_41623377	41591379	T T	TATACACA others(3): Show TATACACACAC	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0004 a0004	a0004c0026 a0004c0026	a0004c0026t0001 a0004c0026t0001	a0004c0026t0001g0003 a0004c0026t0001g0003	1	324	0.0031	10	c.-24 others(29): Show c.-24+26960_-24+26961insGTGTGTGTAT	CHD6	ENSG00000124177.16	transcript	ENST00000373233.8	protein_coding	1/36			chr20	TogoVar
CHD7_chr8_60673740_60873028	60714111	G G	GGCCGCGC others(3): Show GGCCGCGCTTC	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0038 a0001c0038	a0001c0038t0010 a0001c0038t0010	a0001c0038t0010g0169 a0001c0038t0010g0169	1	236	0.0042	10	c.-17 others(31): Show c.-174-27147_-174-27138dupGCCGCGCTTC	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	1/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD7_chr8_60673740_60873028	60810380	A A	AGTGTGTG others(3): Show AGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0089 a0001c0001t0003g0089	1	236	0.0042	10	c.249 others(29): Show c.2498+2129_2498+2138dupGTGTGTGTGT	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	7/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD7_chr8_60673740_60873028	60816113	G G	GTCTCTCT others(3): Show GTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0218 a0001c0002t0006g0218	1	236	0.0042	10	c.249 others(27): Show c.2499-242_2499-233dupCTCTCTCTCT	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	7/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD7_chr8_60673740_60873028	60816113	G G	GTCTGTCT others(3): Show GTCTGTCTCTC	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02970.hp1 HG03831.hp1 HG00438.hp1 HG02970.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0019 a0001c0001 a0001c0019	a0001c0001t0002 a0001c0001t0013 a0001c0019t0010 a0001c0001t0002 a0001c0001t0013 a0001c0019t0010	a0001c0001t0002g0190 a0001c0001t0013g0032 a0001c0019t0010g0043 a0001c0001t0002g0190 a0001c0001t0013g0032 a0001c0019t0010g0043	3	236	0.0127	10	c.249 others(27): Show c.2499-271_2499-270insGTCTCTCTCT	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	7/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD7_chr8_60673740_60873028	60816113	G G	GTCTGTCT others(3): Show GTCTGTCTGTC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01069.hp1 HG02280.hp2 others(1): Show HG00741.hp2 HG01069.hp1 HG02280.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0014 a0001c0001t0039 a0001c0001t0012 a0001c0001t0014 a0001c0001t0039	a0001c0001t0012g0102 a0001c0001t0012g0112 a0001c0001t0014g0221 others(1): Show a0001c0001t0012g0102 a0001c0001t0012g0112 a0001c0001t0014g0221 a0001c0001t0039g0220	4	236	0.0170	10	c.249 others(27): Show c.2499-271_2499-270insGTCTGTCTCT	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	7/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD7_chr8_60673740_60873028	60816115	C C	CTGTCTGT others(3): Show CTGTCTGTCTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02451.hp2 NA18522.hp2 HG02109.hp2 HG02451.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0040 a0001c0001t0018 a0001c0001t0040	a0001c0001t0018g0194 a0001c0001t0018g0197 a0001c0001t0040g0177 a0001c0001t0018g0194 a0001c0001t0018g0197 a0001c0001t0040g0177	3	236	0.0127	10	c.249 others(27): Show c.2499-271_2499-270insGTCTGTCTGT	CHD7	ENSG00000171316.14	transcript	ENST00000423902.7	protein_coding	7/37		INFO_REALIGN_3_PRIME	chr8	TogoVar
CHD8_chr14_21380199_21461123	21380296	A A	ATTTTTTT others(3): Show ATTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG01884.hp2 HG01891.hp1 others(6): Show HG00544.hp2 HG01884.hp2 HG01891.hp1 HG02630.hp2 HG02895.hp2 NA18942.hp1 NA18957.hp2 NA18960.hp2 NA18988.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0007 a0001c0001 a0002c0002 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0002c0007t0001	a0001c0001t0001g0245 a0001c0001t0002g0003 a0001c0001t0002g0004 others(6): Show a0001c0001t0001g0245 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0019 a0001c0001t0004g0258 a0001c0001t0004g0259 a0002c0002t0001g0201 a0002c0007t0001g0232	9	260	0.0346	10	c.53 others(21): Show c.5307_*5316dupAAAAAAAAAA	CHD8	ENSG00000100888.15	transcript	ENST00000646647.2	protein_coding		4902		chr14	TogoVar
CHD8_chr14_21380199_21461123	21442546	G G	GGAGGATC others(3): Show GGAGGATCGCT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0017	1	260	0.0039	10	c.-21 others(31): Show c.-215-10698_-215-10689dupAGCGATCCTC	CHD8	ENSG00000100888.15	transcript	ENST00000646647.2	protein_coding	1/37			chr14	TogoVar
CHD8_chr14_21380199_21461123	21442738	C C	CGGGAGGA others(3): Show CGGGAGGAGAG	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00609.hp2 HG00741.hp1 others(26): Show HG00544.hp2 HG00609.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp1 HG01243.hp2 HG01258.hp1 HG01358.hp1 HG02145.hp2 HG02148.hp1 HG02280.hp2 HG02293.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03209.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03579.hp1 HG04199.hp2 NA18964.hp2 NA19030.hp2 NA20129.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0002c0007 a0005c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0003t0001 a0002c0002t0001 a0002c0007t0001 a0005c0016t0003	a0001c0001t0001g0070 a0001c0001t0001g0079 a0001c0001t0001g0081 others(26): Show a0001c0001t0001g0070 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0123 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0010 a0001c0001t0002g0012 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0032 a0001c0001t0003g0131 a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0003t0001g0044 a0001c0003t0001g0045 a0001c0003t0001g0229 a0002c0002t0001g0148 a0002c0002t0001g0190 a0002c0002t0001g0199 a0002c0002t0001g0200 a0002c0002t0001g0208 a0002c0007t0001g0231 a0002c0007t0001g0232 a0005c0016t0003g0145	29	260	0.1115	10	c.-21 others(31): Show c.-215-10890_-215-10881dupCTCTCCTCCC	CHD8	ENSG00000100888.15	transcript	ENST00000646647.2	protein_coding	1/37			chr14	TogoVar
CHD8_chr14_21380199_21461123	21454162	A A	AAAAAGAA others(3): Show AAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG00738.hp1 others(23): Show HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01884.hp1 HG02004.hp2 HG02083.hp1 HG02155.hp2 HG02257.hp2 HG02572.hp2 HG02683.hp1 HG02897.hp2 HG03209.hp1 HG04204.hp2 NA18522.hp1 NA18962.hp1 NA18978.hp2 NA18979.hp1 NA18990.hp1 NA19084.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0004 a0001c0001 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0003c0004t0001	a0001c0001t0001g0079 a0001c0001t0001g0164 a0001c0001t0001g0165 others(23): Show a0001c0001t0001g0079 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0001g0253 a0001c0001t0003g0168 a0002c0002t0001g0179 a0002c0002t0001g0180 a0002c0002t0001g0182 a0002c0002t0001g0183 a0002c0002t0001g0184 a0002c0002t0001g0250 a0002c0002t0001g0251 a0002c0002t0001g0252 a0003c0004t0001g0170	26	260	0.1000	10	c.-21 others(29): Show c.-216+1860_-216+1869dupCTTTTCTTTT	CHD8	ENSG00000100888.15	transcript	ENST00000646647.2	protein_coding	1/37			chr14	TogoVar
CHD8_chr14_21380199_21461123	21457628	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0148 a0002c0002t0001g0148	1	260	0.0039	10	c.-18 others(21): Show c.-1813_-1812insTTTTTTTTTT	CHD8	ENSG00000100888.15	transcript	ENST00000646647.2	protein_coding		1506		chr14	TogoVar
CHD9NB_chr16_53036484_53057897	53049322	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02486.hp2 HG02723.hp2 others(1): Show HG01884.hp1 HG02486.hp2 HG02723.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0018 a0001c0001t0002 a0001c0001t0006 a0001c0001t0018	a0001c0001t0002g0061 a0001c0001t0006g0116 a0001c0001t0018g0112 others(1): Show a0001c0001t0002g0061 a0001c0001t0006g0116 a0001c0001t0018g0112 a0001c0001t0018g0114	4	406	0.0099	10	c.-18 others(29): Show c.-184-2049_-184-2040dupCACACACACA	CHD9NB	ENSG00000277639.3	transcript	ENST00000619363.3	protein_coding	1/2			chr16	TogoVar
CHD9NB_chr16_53036484_53057897	53051768	A A	AATATATA others(3): Show AATATATATAT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01243.hp2 HG02486.hp2 others(6): Show HG00408.hp2 HG01243.hp2 HG02486.hp2 HG02683.hp2 HG03098.hp2 HG03130.hp2 HG03516.hp1 HG04199.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0018 a0001c0001t0019 a0001c0001t0043	a0001c0001t0001g0015 a0001c0001t0001g0134 a0001c0001t0002g0104 others(3): Show a0001c0001t0001g0015 a0001c0001t0001g0134 a0001c0001t0002g0104 a0001c0001t0018g0114 a0001c0001t0019g0067 a0001c0001t0043g0113	9	406	0.0222	10	c.-18 others(27): Show c.-185+983_-185+992dupATATATATAT	CHD9NB	ENSG00000277639.3	transcript	ENST00000619363.3	protein_coding	1/2			chr16	TogoVar
CHD9_chr16_53049991_53332497	53051768	A A	AATATATA others(3): Show AATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG01243.hp2 HG02486.hp2 others(6): Show HG00408.hp2 HG01243.hp2 HG02486.hp2 HG02683.hp2 HG03098.hp2 HG03130.hp2 HG03516.hp2 HG04199.hp1 HG06807.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004 a0006c0009	a0001c0001t0001 a0001c0001t0003 a0001c0003t0002 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0002 a0002c0002t0001 a0003c0004t0001 a0006c0009t0004	a0001c0001t0001g0043 a0001c0001t0001g0066 a0001c0001t0001g0071 others(6): Show a0001c0001t0001g0043 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0001g0091 a0001c0001t0003g0176 a0001c0003t0002g0170 a0002c0002t0001g0042 a0003c0004t0001g0177 a0006c0009t0004g0107	9	238	0.0378	10	c.-34 others(21): Show c.-3474_-3473insATATATATAT	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding		3222		chr16	TogoVar
CHD9_chr16_53049991_53332497	53063358	T T	TCACACAC others(3): Show TCACACACACA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02630.hp2 NA19084.hp1 HG01074.hp1 HG02630.hp2 NA19084.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0004 a0001c0001 a0001c0003 a0003c0004	a0001c0001t0001 a0001c0003t0002 a0003c0004t0001 a0001c0001t0001 a0001c0003t0002 a0003c0004t0001	a0001c0001t0001g0178 a0001c0003t0002g0202 a0003c0004t0001g0201 a0001c0001t0001g0178 a0001c0003t0002g0202 a0003c0004t0001g0201	3	238	0.0126	10	c.-16 others(29): Show c.-165+8316_-165+8325dupCACACACACA	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	1/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53068992	C C	CTTTTATT others(3): Show CTTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02717.hp1 HG02970.hp2 others(3): Show HG02615.hp1 HG02717.hp1 HG02970.hp2 HG03098.hp1 HG03139.hp1 HG03471.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0005t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0005t0004 a0002c0002t0001	a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0182 others(3): Show a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0182 a0001c0001t0003g0112 a0001c0005t0004g0169 a0002c0002t0001g0109	6	238	0.0252	10	c.-16 others(31): Show c.-165+13935_-165+13944dupATTTTATTTT	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	1/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53107459	C C	CAAAATAA others(3): Show CAAAATAAAAT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00597.hp2 HG00609.hp1 others(28): Show HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00735.hp1 HG01243.hp1 HG02015.hp1 HG02129.hp1 HG02300.hp1 HG02895.hp1 HG02897.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp1 HG03471.hp2 HG03579.hp1 HG04199.hp2 NA18939.hp2 NA18950.hp1 NA18955.hp1 NA18963.hp2 NA18964.hp2 NA18970.hp2 NA18992.hp2 NA18995.hp1 NA18999.hp2 NA19012.hp1 NA19012.hp2 NA19062.hp2 NA19084.hp2 NA19088.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0005 others(3): Show a0001c0001 a0001c0003 a0001c0005 a0001c0016 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0015 a0001c0003t0002 others(6): Show a0001c0001t0001 a0001c0001t0015 a0001c0003t0002 a0001c0003t0010 a0001c0003t0019 a0001c0005t0018 a0001c0016t0002 a0002c0002t0001 a0003c0004t0001	a0001c0001t0001g0014 a0001c0001t0001g0026 a0001c0001t0001g0038 others(28): Show a0001c0001t0001g0014 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0159 a0001c0001t0001g0225 a0001c0001t0015g0166 a0001c0003t0002g0002 a0001c0003t0002g0005 a0001c0003t0002g0015 a0001c0003t0002g0028 a0001c0003t0002g0029 a0001c0003t0002g0047 a0001c0003t0002g0153 a0001c0003t0002g0154 a0001c0003t0002g0161 a0001c0003t0010g0006 a0001c0003t0010g0013 a0001c0003t0019g0004 a0001c0005t0018g0001 a0001c0016t0002g0156 a0002c0002t0001g0009 a0002c0002t0001g0010 a0002c0002t0001g0019 a0002c0002t0001g0020 a0002c0002t0001g0037 a0002c0002t0001g0082 a0002c0002t0001g0106 a0002c0002t0001g0120 a0002c0002t0001g0163 a0003c0004t0001g0007 a0003c0004t0001g0177	31	238	0.1303	10	c.-16 others(31): Show c.-164-48443_-164-48434dupATAAAATAAA	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	1/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53114560	C C	CATTATTT others(3): Show CATTATTTTTT	intron_variant intron_variant	MODIFIER	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0010 a0001c0003t0010	a0001c0003t0010g0006 a0001c0003t0010g0006	1	238	0.0042	10	c.-16 others(31): Show c.-164-41352_-164-41343dupATTTTTTATT	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	1/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53146415	G G	GTGTATAT others(3): Show GTGTATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01433.hp1 HG02895.hp1 others(1): Show HG01255.hp2 HG01433.hp1 HG02895.hp1 HG02897.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0120 others(1): Show a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0120 a0002c0002t0001g0163	4	238	0.0168	10	c.-16 others(29): Show c.-164-9510_-164-9509insGTATATATAT	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	1/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53183754	A A	AAATACAA others(3): Show AAATACAATAC	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0004 a0001c0005t0004	a0001c0005t0004g0097 a0001c0005t0004g0097	1	238	0.0042	10	c.145 others(31): Show c.1453-25709_1453-25700dupACAATACAAT	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	2/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHD9_chr16_53049991_53332497	53247248	C C	CCTGCACA others(3): Show CCTGCACATTG	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01433.hp1 HG01255.hp2 HG01433.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0087 a0002c0002t0001g0088	2	238	0.0084	10	c.345 others(25): Show c.3455-40_3455-39insCATTGCTGCA	CHD9	ENSG00000177200.18	transcript	ENST00000447540.6	protein_coding	15/38		INFO_REALIGN_3_PRIME	chr16	TogoVar
CHDH_chr3_53807335_53851419	53810758	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0040 a0002c0011t0040	a0002c0011t0040g0232 a0002c0011t0040g0232	1	392	0.0026	10	c.70 others(21): Show c.7009_*7018dupTTTTTTTTTT	CHDH	ENSG00000016391.11	transcript	ENST00000315251.11	protein_coding		1576		chr3	TogoVar
CHDH_chr3_53807335_53851419	53822781	A A	AAAGACCC others(3): Show AAAGACCCTGC	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03516.hp1 HG03540.hp2 others(1): Show HG02451.hp2 HG03516.hp1 HG03540.hp2 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0065 a0002c0002t0073 a0002c0002t0074 others(1): Show a0002c0002t0065 a0002c0002t0073 a0002c0002t0074 a0002c0002t0146	a0002c0002t0065g0038 a0002c0002t0073g0039 a0002c0002t0074g0037 others(1): Show a0002c0002t0065g0038 a0002c0002t0073g0039 a0002c0002t0074g0037 a0002c0002t0146g0230	4	392	0.0102	10	c.704 others(25): Show c.704-149_704-140dupGCAGGGTCTT	CHDH	ENSG00000016391.11	transcript	ENST00000315251.11	protein_coding	3/8			chr3	TogoVar
CHDH_chr3_53807335_53851419	53828162	G G	GACACACA others(3): Show GACACACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00558.hp2 HG00597.hp2 others(11): Show HG00408.hp2 HG00558.hp2 HG00597.hp2 HG00621.hp2 HG01074.hp1 HG01358.hp1 HG01361.hp2 HG01928.hp1 HG02015.hp1 HG02015.hp2 HG02080.hp1 NA18972.hp1 NA19058.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 a0001c0001 a0001c0009 a0002c0002	a0001c0001t0001 a0001c0001t0139 a0001c0009t0111 others(8): Show a0001c0001t0001 a0001c0001t0139 a0001c0009t0111 a0002c0002t0003 a0002c0002t0005 a0002c0002t0016 a0002c0002t0024 a0002c0002t0062 a0002c0002t0100 a0002c0002t0106 a0002c0002t0113	a0001c0001t0001g0204 a0001c0001t0139g0273 a0001c0009t0111g0317 others(10): Show a0001c0001t0001g0204 a0001c0001t0139g0273 a0001c0009t0111g0317 a0002c0002t0003g0201 a0002c0002t0003g0206 a0002c0002t0005g0073 a0002c0002t0016g0024 a0002c0002t0016g0199 a0002c0002t0024g0197 a0002c0002t0062g0058 a0002c0002t0100g0200 a0002c0002t0106g0194 a0002c0002t0113g0154	14	392	0.0357	10	c.-59 others(27): Show c.-59-4105_-59-4096dupGTGTGTGTGT	CHDH	ENSG00000016391.11	transcript	ENST00000315251.11	protein_coding	2/8			chr3	TogoVar

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