Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
ATP9B_chr18_79064394_79383283	79376214	C C	CACACAAA others(3): Show CACACAAAAAA	intron_variant intron_variant	MODIFIER	HG02717.hp1 NA18522.hp2 NA18612.hp2 HG02717.hp1 NA18522.hp2 NA18612.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0001 a0002c0005t0001 a0001c0001t0001 a0002c0005t0001	a0001c0001t0001g0054 a0001c0001t0001g0089 a0002c0005t0001g0242 a0001c0001t0001g0054 a0001c0001t0001g0089 a0002c0005t0001g0242	3	298	0.0101	10	c.330 others(27): Show c.3307+789_3307+790insCACAAAAAAA	ATP9B	ENSG00000166377.21	transcript	ENST00000426216.6	protein_coding	29/29	INFO_REALIGN_3_PRIME	chr18	TogoVar
ATPAF1_chr1_46627737_46673364	46654528	T T	TTTATTTA others(3): Show TTTATTTATTA	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0130 a0001c0001t0020g0130	1	412	0.0024	10	c.490 others(25): Show c.490-662_490-661insTAATAAATAA	ATPAF1	ENSG00000123472.13	transcript	ENST00000574428.6	protein_coding	4/8		chr1	TogoVar
ATPAF2_chr17_18013021_18044168	18019147	C C	CCACACAC others(3): Show CCACACACACA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG00558.hp2 others(33): Show HG00280.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG01433.hp2 HG01928.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG02040.hp2 HG02293.hp2 HG02683.hp1 HG02818.hp2 HG03139.hp2 HG03453.hp2 HG03942.hp2 NA18906.hp1 NA18944.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18968.hp1 NA18980.hp1 NA18983.hp2 NA18992.hp1 NA19004.hp2 NA19010.hp2 NA19011.hp2 NA19068.hp1 NA19078.hp1 NA19079.hp2 NA19083.hp1 NA19085.hp2 NA20300.hp1 NA20752.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0003c0004t0005	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0013 others(24): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0042 a0001c0001t0001g0046 a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0118 a0001c0001t0001g0132 a0001c0001t0001g0169 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0238 a0001c0001t0001g0266 a0001c0001t0001g0268 a0001c0001t0002g0211 a0001c0001t0002g0254 a0001c0001t0004g0136 a0001c0001t0004g0152 a0001c0001t0004g0182 a0003c0004t0005g0058	36	328	0.1098	10	c.733 others(25): Show c.733-471_733-462dupTGTGTGTGTG	ATPAF2	ENSG00000171953.16	transcript	ENST00000474627.8	protein_coding	7/7		chr17	TogoVar
ATPAF2_chr17_18013021_18044168	18019183	A A	ACACACCC others(3): Show ACACACCCCAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03516.hp2 HG02258.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0200 a0001c0001t0001g0196 a0001c0001t0001g0200	2	328	0.0061	10	c.733 others(25): Show c.733-498_733-497insGTGGGGTGTG	ATPAF2	ENSG00000171953.16	transcript	ENST00000474627.8	protein_coding	7/7		chr17	TogoVar
ATRNL1_chr10_115088365_115953999	115214041	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01943.hp2 HG02572.hp2 others(7): Show HG00639.hp2 HG01943.hp2 HG02572.hp2 HG02717.hp1 HG02723.hp2 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG04115.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0001c0015	a0001c0001t0003 a0001c0005t0007 a0001c0005t0018 others(4): Show a0001c0001t0003 a0001c0005t0007 a0001c0005t0018 a0001c0005t0032 a0001c0007t0027 a0001c0007t0030 a0001c0015t0034	a0001c0001t0003g0074 a0001c0001t0003g0104 a0001c0005t0007g0002 others(7): Show a0001c0001t0003g0074 a0001c0001t0003g0104 a0001c0005t0007g0002 a0001c0005t0007g0004 a0001c0005t0007g0009 a0001c0005t0018g0003 a0001c0005t0032g0005 a0001c0007t0027g0006 a0001c0007t0030g0008 a0001c0015t0034g0110	10	128	0.0781	10	c.134 others(29): Show c.1349-1638_1349-1629dupCACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	8/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115223913	G G	GTGTGTAT others(3): Show GTGTGTATATA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01515.hp2 HG01891.hp1 others(12): Show HG00735.hp2 HG01515.hp2 HG01891.hp1 HG01943.hp1 HG02055.hp2 HG02135.hp2 HG02622.hp2 HG02970.hp1 HG03239.hp2 HG03579.hp1 HG03834.hp2 HG06807.hp2 NA18522.hp1 NA18959.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0013	a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 others(7): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0029 a0001c0001t0035 a0001c0001t0036 a0001c0002t0028 a0001c0003t0002 a0001c0013t0009	a0001c0001t0002g0077 a0001c0001t0002g0111 a0001c0001t0002g0113 others(12): Show a0001c0001t0002g0077 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0123 a0001c0001t0008g0079 a0001c0001t0008g0082 a0001c0001t0009g0122 a0001c0001t0011g0112 a0001c0001t0029g0075 a0001c0001t0035g0118 a0001c0001t0036g0117 a0001c0002t0028g0076 a0001c0003t0002g0081 a0001c0013t0009g0078	15	128	0.1172	10	c.153 others(29): Show c.1532+8034_1532+8035insGTGTATATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115223913	G G	GTGTGTGT others(3): Show GTGTGTGTATA	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01258.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0009 a0001c0006t0009	a0001c0006t0009g0038 a0001c0006t0009g0038	1	128	0.0078	10	c.153 others(29): Show c.1532+8034_1532+8035insGTGTGTATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115223929	A A	ATATATTT others(3): Show ATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03209.hp1 HG02970.hp2 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0006 a0001c0003t0047 a0001c0002t0006 a0001c0003t0047	a0001c0002t0006g0062 a0001c0003t0047g0128 a0001c0002t0006g0062 a0001c0003t0047g0128	2	128	0.0156	10	c.153 others(29): Show c.1532+8050_1532+8051insATATTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115223929	A A	ATATTTTT others(3): Show ATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02300.hp2 NA18957.hp1 HG01081.hp1 HG02300.hp2 NA18957.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0002t0004 a0001c0003t0004 a0001c0002t0001 a0001c0002t0004 a0001c0003t0004	a0001c0002t0001g0045 a0001c0002t0004g0058 a0001c0003t0004g0042 a0001c0002t0001g0045 a0001c0002t0004g0058 a0001c0003t0004g0042	3	128	0.0234	10	c.153 others(29): Show c.1532+8050_1532+8051insATTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115225475	T T	TTAATATA others(3): Show TTAATATAATA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp2 HG00741.hp1 others(45): Show HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01258.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp2 HG02015.hp2 HG02055.hp2 HG02135.hp2 HG02145.hp2 HG02280.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG04115.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18995.hp1 NA19011.hp1 NA19030.hp1 NA19043.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0011 a0002c0004 a0002c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0029 a0001c0001t0036 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0006 a0001c0003t0003 a0001c0003t0041 a0001c0003t0047 a0001c0005t0018 a0001c0006t0013 a0001c0007t0027 a0001c0007t0030 a0001c0009t0005 a0001c0011t0002 a0002c0004t0012 a0002c0014t0009	a0001c0001t0001g0120 a0001c0001t0002g0015 a0001c0001t0002g0017 others(45): Show a0001c0001t0001g0120 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0111 a0001c0001t0003g0061 a0001c0001t0003g0074 a0001c0001t0007g0027 a0001c0001t0008g0014 a0001c0001t0008g0023 a0001c0001t0008g0030 a0001c0001t0008g0082 a0001c0001t0010g0018 a0001c0001t0011g0112 a0001c0001t0011g0119 a0001c0001t0013g0019 a0001c0001t0016g0031 a0001c0001t0017g0028 a0001c0001t0019g0020 a0001c0001t0020g0115 a0001c0001t0022g0032 a0001c0001t0023g0022 a0001c0001t0024g0024 a0001c0001t0025g0021 a0001c0001t0029g0075 a0001c0001t0036g0117 a0001c0002t0001g0041 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0004g0040 a0001c0002t0004g0056 a0001c0002t0004g0067 a0001c0002t0005g0043 a0001c0002t0005g0044 a0001c0002t0005g0053 a0001c0002t0006g0062 a0001c0003t0003g0060 a0001c0003t0041g0047 a0001c0003t0047g0128 a0001c0005t0018g0003 a0001c0006t0013g0029 a0001c0007t0027g0006 a0001c0007t0030g0008 a0001c0009t0005g0059 a0001c0011t0002g0116 a0002c0004t0012g0025 a0002c0004t0012g0026 a0002c0014t0009g0072	48	128	0.3750	10	c.153 others(29): Show c.1532+9617_1532+9626dupAATATAATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115230870	T T	TGAGAGAG others(3): Show TGAGAGAGAGA	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0043 a0001c0002t0005g0043	1	128	0.0078	10	c.153 others(31): Show c.1533-10658_1533-10649dupGAGAGAGAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	9/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115271165	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02630.hp1 HG02818.hp1 others(2): Show HG02615.hp2 HG02630.hp1 HG02818.hp1 HG03041.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0007 a0001c0001t0008 a0001c0001t0016 others(2): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0006t0013	a0001c0001t0007g0027 a0001c0001t0008g0030 a0001c0001t0016g0031 others(2): Show a0001c0001t0007g0027 a0001c0001t0008g0030 a0001c0001t0016g0031 a0001c0001t0017g0028 a0001c0006t0013g0029	5	128	0.0391	10	c.210 others(29): Show c.2100+2747_2100+2756dupCACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	13/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115350334	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG04115.hp2 HG00741.hp1 HG04115.hp2	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0005 a0001c0009t0005 a0001c0002t0005 a0001c0009t0005	a0001c0002t0005g0053 a0001c0009t0005g0059 a0001c0002t0005g0053 a0001c0009t0005g0059	2	128	0.0156	10	c.317 others(31): Show c.3175+15917_3175+15926dupAAAAAAAAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115351742	G G	GTGTTTTG others(3): Show GTGTTTTGTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01891.hp2 HG02135.hp2 others(12): Show HG01109.hp1 HG01891.hp2 HG02135.hp2 HG02145.hp2 HG02280.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02818.hp1 HG03209.hp1 HG03471.hp1 HG03540.hp2 NA19043.hp1 NA19043.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0006 others(1): Show a0001c0001 a0001c0003 a0001c0006 a0002c0008	a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 others(10): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0013 a0001c0001t0016 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0029 a0001c0003t0047 a0001c0006t0013 a0001c0006t0033 a0002c0008t0044	a0001c0001t0008g0014 a0001c0001t0008g0023 a0001c0001t0008g0030 others(12): Show a0001c0001t0008g0014 a0001c0001t0008g0023 a0001c0001t0008g0030 a0001c0001t0009g0122 a0001c0001t0010g0018 a0001c0001t0013g0019 a0001c0001t0016g0031 a0001c0001t0023g0022 a0001c0001t0025g0021 a0001c0001t0026g0010 a0001c0001t0029g0075 a0001c0003t0047g0128 a0001c0006t0013g0029 a0001c0006t0033g0035 a0002c0008t0044g0063	15	128	0.1172	10	c.317 others(31): Show c.3175+17344_3175+17353dupTGTTTTGTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115351742	G G	GTTTTTTG others(3): Show GTTTTTTGTTT	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0030 a0001c0007t0030	a0001c0007t0030g0008 a0001c0007t0030g0008	1	128	0.0078	10	c.317 others(31): Show c.3175+17324_3175+17325insTTTTTGTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	19/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115403257	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0033 a0001c0006t0033	a0001c0006t0033g0035 a0001c0006t0033g0035	1	128	0.0078	10	c.326 others(29): Show c.3269+8515_3269+8524dupTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	20/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115442270	G G	GCTCTCTC others(3): Show GCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02970.hp1 HG03540.hp1 others(1): Show HG02809.hp2 HG02970.hp1 HG03540.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0011 a0001c0001t0035 others(1): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0035 a0001c0003t0038	a0001c0001t0002g0017 a0001c0001t0011g0119 a0001c0001t0035g0118 others(1): Show a0001c0001t0002g0017 a0001c0001t0011g0119 a0001c0001t0035g0118 a0001c0003t0038g0106	4	128	0.0313	10	c.332 others(31): Show c.3322+15993_3322+16002dupCTCTCTCTCT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	21/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115442303	C C	CTCTCTCT others(3): Show CTCTCTCTGTG	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0067 a0001c0002t0004g0067	1	128	0.0078	10	c.332 others(31): Show c.3322+16002_3322+16003insCTCTCTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	21/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115559414	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02630.hp1 HG02723.hp2 others(2): Show HG02615.hp2 HG02630.hp1 HG02723.hp2 HG02818.hp1 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0007 others(1): Show a0001c0001 a0001c0006 a0001c0007 a0001c0013	a0001c0001t0008 a0001c0001t0016 a0001c0006t0013 others(2): Show a0001c0001t0008 a0001c0001t0016 a0001c0006t0013 a0001c0007t0030 a0001c0013t0009	a0001c0001t0008g0030 a0001c0001t0016g0031 a0001c0006t0013g0029 others(2): Show a0001c0001t0008g0030 a0001c0001t0016g0031 a0001c0006t0013g0029 a0001c0007t0030g0008 a0001c0013t0009g0078	5	128	0.0391	10	c.379 others(29): Show c.3795+9899_3795+9908dupTGTGTGTGTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115559443	T T	TGCGCGCG others(3): Show TGCGCGCGCGC	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18994.hp2 NA18959.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0006 a0001c0016t0003 a0001c0001t0006 a0001c0016t0003	a0001c0001t0006g0109 a0001c0016t0003g0097 a0001c0001t0006g0109 a0001c0016t0003g0097	2	128	0.0156	10	c.379 others(29): Show c.3795+9908_3795+9917dupGCGCGCGCGC	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115559443	T T	TGTGCGCG others(3): Show TGTGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02523.hp1 NA18957.hp2 HG02523.hp1 NA18957.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0105 a0001c0001t0006g0100 a0001c0001t0001g0105 a0001c0001t0006g0100	2	128	0.0156	10	c.379 others(29): Show c.3795+9908_3795+9909insTGCGCGCGCG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115559443	T T	TGTGTGCG others(3): Show TGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG03209.hp2 HG03453.hp1 others(3): Show HG02015.hp1 HG03209.hp2 HG03453.hp1 HG03540.hp1 NA18906.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0010 a0001c0001 a0001c0003 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0003t0031 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0031 a0001c0010t0006	a0001c0001t0001g0069 a0001c0001t0001g0085 a0001c0001t0001g0125 others(3): Show a0001c0001t0001g0069 a0001c0001t0001g0085 a0001c0001t0001g0125 a0001c0001t0002g0017 a0001c0003t0031g0016 a0001c0010t0006g0087	6	128	0.0469	10	c.379 others(29): Show c.3795+9908_3795+9909insTGTGCGCGCG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115559443	T T	TGTGTGTG others(3): Show TGTGTGTGCGC	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	128	0.0078	10	c.379 others(29): Show c.3795+9908_3795+9909insTGTGTGCGCG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115561682	T T	TGTGTGTG others(3): Show TGTGTGTGTGG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00738.hp1 HG01071.hp1 others(21): Show HG00735.hp1 HG00738.hp1 HG01071.hp1 HG01081.hp1 HG01109.hp2 HG01123.hp2 HG01258.hp2 HG01515.hp1 HG01952.hp2 HG02015.hp2 HG02258.hp2 HG02300.hp2 HG02615.hp1 HG02895.hp2 HG02976.hp2 HG03834.hp2 HG04115.hp2 NA18522.hp2 NA18994.hp1 NA18995.hp1 NA19003.hp2 NA19011.hp1 NA19070.hp1 NA20752.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0009 a0001c0002 a0001c0003 a0001c0009	a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 others(8): Show a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0028 a0001c0003t0003 a0001c0003t0004 a0001c0003t0014 a0001c0003t0039 a0001c0003t0041 a0001c0003t0045 a0001c0009t0005	a0001c0002t0001g0041 a0001c0002t0001g0048 a0001c0002t0001g0050 others(21): Show a0001c0002t0001g0041 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0004g0039 a0001c0002t0004g0040 a0001c0002t0004g0054 a0001c0002t0004g0056 a0001c0002t0004g0058 a0001c0002t0004g0067 a0001c0002t0004g0127 a0001c0002t0005g0037 a0001c0002t0005g0043 a0001c0002t0005g0044 a0001c0002t0005g0046 a0001c0002t0028g0076 a0001c0003t0003g0049 a0001c0003t0004g0042 a0001c0003t0014g0089 a0001c0003t0039g0126 a0001c0003t0041g0047 a0001c0003t0045g0090 a0001c0009t0005g0059	24	128	0.1875	10	c.379 others(31): Show c.3795+12153_3795+12154insTGGGTGTGTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115561688	T T	TGTGTGGG others(3): Show TGTGTGGGTGG	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0002 a0001c0011t0002	a0001c0011t0002g0116 a0001c0011t0002g0116	1	128	0.0078	10	c.379 others(31): Show c.3795+12153_3795+12154insTGTGGGTGGG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115561704	G G	GGGGGGTG others(3): Show GGGGGGTGTGT	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0080 a0001c0001t0002g0080	1	128	0.0078	10	c.379 others(31): Show c.3795+12169_3795+12170insGGGGTGTGTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115561704	G G	GGGGTGTG others(3): Show GGGGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02055.hp2 HG02135.hp2 others(5): Show HG01515.hp2 HG02055.hp2 HG02135.hp2 HG02523.hp2 HG03041.hp1 HG03239.hp1 HG03834.hp1 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0029 a0001c0003t0003	a0001c0001t0001g0098 a0001c0001t0001g0120 a0001c0001t0001g0124 others(5): Show a0001c0001t0001g0098 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0001t0002g0077 a0001c0001t0002g0123 a0001c0001t0008g0082 a0001c0001t0029g0075 a0001c0003t0003g0060	8	128	0.0625	10	c.379 others(31): Show c.3795+12169_3795+12170insGGTGTGTGTG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115561704	G G	GGTGTGTG others(3): Show GGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG01891.hp1 others(6): Show HG00735.hp2 HG00738.hp2 HG01891.hp1 HG02055.hp1 HG02622.hp2 HG02976.hp1 HG03471.hp1 HG03471.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 others(3): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0010 a0001c0001t0020 a0001c0001t0026 a0001c0005t0018	a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 others(6): Show a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0008g0079 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0020g0115 a0001c0001t0026g0010 a0001c0005t0018g0003	9	128	0.0703	10	c.379 others(31): Show c.3795+12179_3795+12188dupGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115577610	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01361.hp1 HG02145.hp1 others(4): Show HG01258.hp2 HG01361.hp1 HG02145.hp1 NA18994.hp1 NA19003.hp2 NA19030.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0001 a0001c0002t0004 others(1): Show a0001c0001t0011 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005	a0001c0001t0011g0119 a0001c0002t0001g0048 a0001c0002t0001g0103 others(4): Show a0001c0001t0011g0119 a0001c0002t0001g0048 a0001c0002t0001g0103 a0001c0002t0004g0039 a0001c0002t0004g0054 a0001c0002t0004g0127 a0001c0002t0005g0057	7	128	0.0547	10	c.379 others(31): Show c.3795+28108_3795+28117dupGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115621254	A A	AATATATA others(3): Show AATATATATAT	intron_variant intron_variant	MODIFIER	HG03471.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1 HG03471.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0026 a0001c0001t0001 a0001c0001t0009 a0001c0001t0026	a0001c0001t0001g0096 a0001c0001t0009g0122 a0001c0001t0026g0010 a0001c0001t0001g0096 a0001c0001t0009g0122 a0001c0001t0026g0010	3	128	0.0234	10	c.379 others(31): Show c.3795+71732_3795+71741dupTATATATATA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115621276	T T	TATAGAGA others(3): Show TATAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0095 a0001c0001t0042g0095	1	128	0.0078	10	c.379 others(31): Show c.3795+71741_3795+71742insTAGAGAGAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115621276	T T	TATATATA others(3): Show TATATATAGAG	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG03195.hp1 HG06807.hp2 HG02132.hp1 HG03195.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0014 a0001c0001t0002 a0001c0001t0008 a0001c0001t0014	a0001c0001t0002g0080 a0001c0001t0008g0079 a0001c0001t0014g0001 a0001c0001t0002g0080 a0001c0001t0008g0079 a0001c0001t0014g0001	3	128	0.0234	10	c.379 others(31): Show c.3795+71741_3795+71742insTATATAGAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115621276	T T	TATATATA others(3): Show TATATATATAG	intron_variant intron_variant	MODIFIER	HG01515.hp2 NA18959.hp2 HG01515.hp2 NA18959.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0077 a0001c0001t0002g0123 a0001c0001t0002g0077 a0001c0001t0002g0123	2	128	0.0156	10	c.379 others(31): Show c.3795+71741_3795+71742insTATATATAGA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115632864	T T	TTTTTATT others(3): Show TTTTTATTTTA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01109.hp2 HG02055.hp1 others(8): Show HG00741.hp2 HG01109.hp2 HG02055.hp1 HG02258.hp1 HG02809.hp2 HG02976.hp2 HG03195.hp2 HG03471.hp2 HG03579.hp2 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0006 a0001c0001 a0001c0003 a0001c0006	a0001c0001t0003 a0001c0001t0010 a0001c0001t0015 others(7): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0015 a0001c0001t0043 a0001c0003t0014 a0001c0003t0015 a0001c0003t0037 a0001c0003t0038 a0001c0003t0039 a0001c0006t0033	a0001c0001t0003g0066 a0001c0001t0010g0033 a0001c0001t0010g0034 others(8): Show a0001c0001t0003g0066 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0015g0064 a0001c0001t0043g0094 a0001c0003t0014g0089 a0001c0003t0015g0108 a0001c0003t0037g0121 a0001c0003t0038g0106 a0001c0003t0039g0126 a0001c0006t0033g0035	11	128	0.0859	10	c.379 others(31): Show c.3795+83363_3795+83372dupATTTTATTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115646036	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00741.hp2 HG01081.hp2 others(19): Show HG00639.hp2 HG00741.hp2 HG01081.hp2 HG01123.hp1 HG01361.hp2 HG01952.hp1 HG02818.hp2 HG02896.hp1 HG02897.hp2 HG03209.hp2 HG03453.hp1 HG03540.hp1 HG04115.hp1 HG06807.hp1 NA18957.hp2 NA18994.hp2 NA19003.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19070.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0010 a0001c0001 a0001c0005 a0001c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0011 a0001c0001t0046 a0001c0005t0007 a0001c0005t0032 a0001c0010t0006	a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 others(19): Show a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 a0001c0001t0001g0070 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0105 a0001c0001t0002g0017 a0001c0001t0003g0061 a0001c0001t0003g0066 a0001c0001t0003g0093 a0001c0001t0003g0104 a0001c0001t0006g0109 a0001c0001t0011g0119 a0001c0001t0046g0099 a0001c0005t0007g0002 a0001c0005t0007g0004 a0001c0005t0007g0009 a0001c0005t0032g0005 a0001c0010t0006g0087	22	128	0.1719	10	c.379 others(31): Show c.3796-81188_3796-81179dupCACACACACA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115696870	C C	CGAGAGAG others(3): Show CGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0047 a0001c0003t0047	a0001c0003t0047g0128 a0001c0003t0047g0128	1	128	0.0078	10	c.379 others(31): Show c.3796-30358_3796-30349dupAGAGAGAGAG	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115717548	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02258.hp1 HG03540.hp1 others(2): Show HG01943.hp2 HG02258.hp1 HG03540.hp1 NA19003.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0046 a0001c0003t0037	a0001c0001t0001g0096 a0001c0001t0002g0017 a0001c0001t0003g0074 others(2): Show a0001c0001t0001g0096 a0001c0001t0002g0017 a0001c0001t0003g0074 a0001c0001t0046g0099 a0001c0003t0037g0121	5	128	0.0391	10	c.379 others(29): Show c.3796-9688_3796-9679dupTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	26/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115729495	T T	TTGTGTGT others(3): Show TTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02300.hp1 HG02055.hp2 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0003 a0001c0001t0008	a0001c0001t0003g0092 a0001c0001t0008g0082 a0001c0001t0003g0092 a0001c0001t0008g0082	2	128	0.0156	10	c.390 others(29): Show c.3903+2172_3903+2181dupGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115738126	A A	ATTTTTTT others(3): Show ATTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00735.hp2 HG00639.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0032 a0001c0001t0002 a0001c0005t0032	a0001c0001t0002g0114 a0001c0005t0032g0005 a0001c0001t0002g0114 a0001c0005t0032g0005	2	128	0.0156	10	c.390 others(31): Show c.3903+10792_3903+10801dupTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115772593	C C	CTGTGTGT others(3): Show CTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01361.hp2 HG02132.hp2 others(7): Show HG01258.hp2 HG01361.hp2 HG02132.hp2 HG02615.hp1 HG02895.hp2 HG04115.hp2 HG06807.hp2 NA18522.hp2 NA18957.hp2 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0009	a0001c0001t0001 a0001c0001t0008 a0001c0001t0046 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0046 a0001c0002t0001 a0001c0003t0041 a0001c0009t0005	a0001c0001t0001g0091 a0001c0001t0001g0101 a0001c0001t0001g0105 others(7): Show a0001c0001t0001g0091 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0008g0079 a0001c0001t0046g0099 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0003t0041g0047 a0001c0009t0005g0059	10	128	0.0781	10	c.390 others(31): Show c.3903+45241_3903+45242insGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115772597	C C	CTGTGTGT others(3): Show CTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01081.hp1 HG01123.hp2 others(10): Show HG00741.hp1 HG01081.hp1 HG01123.hp2 HG01258.hp1 HG01361.hp1 HG01515.hp1 HG03139.hp1 HG03239.hp2 HG03471.hp1 HG03834.hp2 NA18906.hp2 NA18957.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0013	a0001c0001t0019 a0001c0001t0024 a0001c0001t0026 others(6): Show a0001c0001t0019 a0001c0001t0024 a0001c0001t0026 a0001c0002t0001 a0001c0002t0005 a0001c0002t0028 a0001c0003t0004 a0001c0006t0009 a0001c0013t0009	a0001c0001t0019g0020 a0001c0001t0024g0024 a0001c0001t0026g0010 others(10): Show a0001c0001t0019g0020 a0001c0001t0024g0024 a0001c0001t0026g0010 a0001c0002t0001g0045 a0001c0002t0005g0037 a0001c0002t0005g0043 a0001c0002t0005g0046 a0001c0002t0005g0053 a0001c0002t0005g0057 a0001c0002t0028g0076 a0001c0003t0004g0042 a0001c0006t0009g0038 a0001c0013t0009g0078	13	128	0.1016	10	c.390 others(31): Show c.3903+45268_3903+45277dupGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115815415	A A	ATGTGTGT others(3): Show ATGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01952.hp1 HG02132.hp1 others(3): Show HG01071.hp2 HG01952.hp1 HG02132.hp1 HG02622.hp1 NA18522.hp2 NA18959.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0014 a0001c0001 a0001c0003 a0002c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0022 a0001c0003t0041 a0002c0014t0009	a0001c0001t0001g0065 a0001c0001t0002g0077 a0001c0001t0002g0080 others(3): Show a0001c0001t0001g0065 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0022g0032 a0001c0003t0041g0047 a0002c0014t0009g0072	6	128	0.0469	10	c.390 others(31): Show c.3904-32434_3904-32425dupGTGTGTGTGT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	27/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115856428	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02258.hp1 HG02895.hp1 others(3): Show HG02145.hp1 HG02258.hp1 HG02895.hp1 HG02897.hp1 HG03209.hp2 HG06807.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004	a0001c0001t0001 a0001c0002t0001 a0001c0003t0037 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0037 a0002c0004t0012	a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0002t0001g0103 others(3): Show a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0002t0001g0103 a0001c0003t0037g0121 a0002c0004t0012g0025 a0002c0004t0012g0026	6	128	0.0469	10	c.401 others(29): Show c.4018+8450_4018+8459dupAAAAAAAAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115868822	C C	CTTTTTTT others(3): Show CTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01071.hp1 HG01071.hp2 others(5): Show HG00741.hp1 HG01071.hp1 HG01071.hp2 HG01123.hp2 HG01258.hp1 HG01515.hp1 HG02300.hp2 HG03834.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0014 a0001c0002 a0001c0006 a0002c0014	a0001c0002t0004 a0001c0002t0005 a0001c0002t0028 others(2): Show a0001c0002t0004 a0001c0002t0005 a0001c0002t0028 a0001c0006t0009 a0002c0014t0009	a0001c0002t0004g0058 a0001c0002t0005g0037 a0001c0002t0005g0044 others(5): Show a0001c0002t0004g0058 a0001c0002t0005g0037 a0001c0002t0005g0044 a0001c0002t0005g0046 a0001c0002t0005g0053 a0001c0002t0028g0076 a0001c0006t0009g0038 a0002c0014t0009g0072	8	128	0.0625	10	c.401 others(31): Show c.4018+20847_4018+20856dupTTTTTTTTTT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115871469	T T	TTATATAT others(3): Show TTATATATATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0032 a0001c0005t0032	a0001c0005t0032g0005 a0001c0005t0032g0005	1	128	0.0078	10	c.401 others(31): Show c.4018+23479_4018+23480insATATATATAT	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115879305	C C	CAAAAAAA others(3): Show CAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG00735.hp1 others(70): Show HG00639.hp1 HG00639.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01258.hp2 HG01361.hp2 HG01515.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG02015.hp1 HG02055.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02280.hp2 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03579.hp2 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18957.hp1 NA18959.hp1 NA18959.hp2 NA18994.hp2 NA18995.hp2 NA19003.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19070.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0011 a0001c0012 a0001c0016 a0002c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0017 a0001c0001t0019 a0001c0001t0022 a0001c0001t0026 a0001c0001t0029 a0001c0001t0043 a0001c0001t0046 a0001c0002t0001 a0001c0002t0006 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0014 a0001c0003t0015 a0001c0003t0031 a0001c0003t0038 a0001c0003t0041 a0001c0003t0047 a0001c0005t0007 a0001c0005t0018 a0001c0005t0032 a0001c0006t0013 a0001c0006t0033 a0001c0007t0027 a0001c0009t0005 a0001c0010t0006 a0001c0011t0002 a0001c0012t0001 a0001c0016t0003 a0002c0008t0011 a0002c0008t0044	a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 others(70): Show a0001c0001t0001g0036 a0001c0001t0001g0055 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0002g0077 a0001c0001t0002g0080 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0123 a0001c0001t0003g0061 a0001c0001t0003g0074 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0003g0104 a0001c0001t0006g0109 a0001c0001t0007g0027 a0001c0001t0008g0023 a0001c0001t0008g0030 a0001c0001t0008g0079 a0001c0001t0010g0018 a0001c0001t0010g0033 a0001c0001t0010g0034 a0001c0001t0011g0112 a0001c0001t0011g0119 a0001c0001t0017g0028 a0001c0001t0019g0020 a0001c0001t0022g0032 a0001c0001t0026g0010 a0001c0001t0029g0075 a0001c0001t0043g0094 a0001c0001t0046g0099 a0001c0002t0001g0041 a0001c0002t0001g0045 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0001g0103 a0001c0002t0006g0062 a0001c0002t0006g0086 a0001c0003t0001g0083 a0001c0003t0002g0081 a0001c0003t0003g0049 a0001c0003t0003g0060 a0001c0003t0014g0089 a0001c0003t0015g0108 a0001c0003t0031g0016 a0001c0003t0038g0106 a0001c0003t0041g0047 a0001c0003t0047g0128 a0001c0005t0007g0002 a0001c0005t0007g0009 a0001c0005t0018g0003 a0001c0005t0032g0005 a0001c0006t0013g0029 a0001c0006t0033g0035 a0001c0007t0027g0006 a0001c0009t0005g0059 a0001c0010t0006g0087 a0001c0011t0002g0116 a0001c0012t0001g0071 a0001c0016t0003g0097 a0002c0008t0011g0073 a0002c0008t0044g0063	73	128	0.5703	10	c.401 others(31): Show c.4018+31315_4018+31324dupAAAAAAAAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRNL1_chr10_115088365_115953999	115879312	A A	AAAAAAAA others(3): Show AAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02723.hp2 HG02055.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0008 a0001c0007t0030 a0001c0001t0008 a0001c0007t0030	a0001c0001t0008g0082 a0001c0007t0030g0008 a0001c0001t0008g0082 a0001c0007t0030g0008	2	128	0.0156	10	c.401 others(31): Show c.4018+31324_4018+31325insAAAAAAGAAA	ATRNL1	ENSG00000107518.18	transcript	ENST00000355044.8	protein_coding	28/28	INFO_REALIGN_3_PRIME	chr10	TogoVar
ATRN_chr20_3466018_3656118	3485610	G G	GTTTTTTT others(3): Show GTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02145.hp1 HG02257.hp2 HG02055.hp2 HG02145.hp1 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0012 a0001c0014t0002 a0001c0014t0015 a0001c0001t0012 a0001c0014t0002 a0001c0014t0015	a0001c0001t0012g0208 a0001c0014t0002g0170 a0001c0014t0015g0001 a0001c0001t0012g0208 a0001c0014t0002g0170 a0001c0014t0015g0001	3	220	0.0136	10	c.410 others(29): Show c.410+14113_410+14122dupTTTTTTTTTT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3492168	A A	AGTGTGTG others(3): Show AGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01243.hp2 HG01515.hp2 others(9): Show HG01099.hp1 HG01243.hp2 HG01515.hp2 HG02630.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG03098.hp1 HG03453.hp1 HG03579.hp2 NA19075.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0002t0003 a0001c0002t0004 others(5): Show a0001c0001t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0003t0002 a0001c0003t0031 a0001c0005t0007 a0001c0006t0003	a0001c0001t0001g0021 a0001c0002t0003g0084 a0001c0002t0003g0085 others(9): Show a0001c0001t0001g0021 a0001c0002t0003g0084 a0001c0002t0003g0085 a0001c0002t0004g0030 a0001c0002t0006g0067 a0001c0003t0002g0215 a0001c0003t0002g0216 a0001c0003t0002g0217 a0001c0003t0031g0218 a0001c0005t0007g0213 a0001c0006t0003g0211 a0001c0006t0003g0212	12	220	0.0546	10	c.410 others(29): Show c.410+20678_410+20687dupGTGTGTGTGT	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	1/28	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3535588	T T	TACACACA others(3): Show TACACACACAC	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02486.hp2 HG01891.hp1 HG02486.hp2	a0009 a0009	a0009c0019 a0009c0020 a0009c0019 a0009c0020	a0009c0019t0004 a0009c0020t0014 a0009c0019t0004 a0009c0020t0014	a0009c0019t0004g0210 a0009c0020t0014g0209 a0009c0019t0004g0210 a0009c0020t0014g0209	2	220	0.0091	10	c.494 others(25): Show c.494+282_494+291dupCACACACACA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	2/28	INFO_REALIGN_3_PRIME	chr20	TogoVar

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