Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	164	0.0061	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCTTTCCTTCTTTCTT TCTTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02615.hp2 HG01433.hp1 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0031 a0001c0001t0001 a0001c0001t0031	a0001c0001t0001g0140 a0001c0001t0031g0164 a0001c0001t0001g0140 a0001c0001t0031g0164	2	164	0.0122	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCCTTCTTTCTT TCTTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0107 a0001c0001t0003g0107	1	164	0.0061	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCTTTCCTTCTT TCTTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG03098.hp2 NA18612.hp1 HG03098.hp2 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0113 a0001c0001t0004g0059 a0001c0001t0002g0113 a0001c0001t0004g0059	2	164	0.0122	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCCTTCCTTCCT TCTTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0130 a0001c0001t0002g0130	1	164	0.0061	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCTTTCCTTCTT TCCTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG02922.hp2 NA19000.hp2 HG02922.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0001 a0001c0001t0004 a0001c0002t0001	a0001c0001t0004g0100 a0001c0002t0001g0045 a0001c0001t0004g0100 a0001c0002t0001g0045	2	164	0.0122	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCCTTCCTTCTT TCCTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	36764079	A A	AGAAAGAA others(45): Show AGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAG	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0137 a0001c0001t0006g0137	1	164	0.0061	52	c.204 others(71): Show c.204-29507_204-29506insCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCTTTCTTTCTTTCTTTCTTTC	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	3/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	37040268	G G	GAGGGAAG others(45): Show GAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAA GGA	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	164	0.0061	52	c.70+ others(71): Show c.70+132012_70+132013insTCCTTCCTTCCTTCCTCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCTTCCCT	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	1/9			chr14	TogoVar
SLC25A21_chr14_36672921_37177606	37040268	G G	GAGGGAGG others(45): Show GAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGA	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0119 a0001c0001t0005g0119	1	164	0.0061	52	c.70+ others(71): Show c.70+132012_70+132013insTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTCCCTCCCTCCCT	SLC25A21	ENSG00000183032.12	transcript	ENST00000331299.6	protein_coding	1/9			chr14	TogoVar
SLC25A33_chr1_9534465_9590173	9564765	T T	TATATATA others(45): Show TATATATATATATATATATATATATATATATATATATATATATATATATA TAC	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0316 a0001c0001t0008g0316	1	362	0.0028	52	c.237 others(69): Show c.237-2518_237-2517insTATATATATATATATATATATATATATA TATATATATATATATATATATACA	SLC25A33	ENSG00000171612.7	transcript	ENST00000302692.7	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC25A36_chr3_140936836_140985995	140983578	T T	TATATATA others(45): Show TATATATATATATATATATATATATATGTATATATATATATATATATATA CAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	270	0.0037	52	c.71 others(63): Show c.7125_*7126insATATATATATATATATATATATATATGTATATAT ATATATATATATATACAC	SLC25A36	ENSG00000114120.14	transcript	ENST00000324194.12	protein_coding		2584		chr3	TogoVar
SLC25A36_chr3_140936836_140985995	140983578	T T	TATATATA others(45): Show TATATATATATATATATATATATATGTATATATATATATATATATATATA CAC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0049 a0001c0001t0056g0049	1	270	0.0037	52	c.71 others(63): Show c.7125_*7126insATATATATATATATATATATATATGTATATATAT ATATATATATATATACAC	SLC25A36	ENSG00000114120.14	transcript	ENST00000324194.12	protein_coding		2584		chr3	TogoVar
SLC25A45_chr11_65370192_65387646	65374305	C C	CCCATGTG others(45): Show CCCATGTGCCCAGGTGGAGCAGGGTAGCCATGTGCCCAGGTGGAGCAGGG TAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG01361.hp2 HG02004.hp1 HG00642.hp1 HG01361.hp2 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006	a0001c0001t0002g0003 a0001c0001t0003g0002 a0001c0001t0006g0067 a0001c0001t0002g0003 a0001c0001t0003g0002 a0001c0001t0006g0067	3	412	0.0073	52	c.21 others(63): Show c.2101_*2102insCTACCCTGCTCCACCTGGGCACATGGCTACCCTG CTCCACCTGGGCACATGG	SLC25A45	ENSG00000162241.13	transcript	ENST00000398802.6	protein_coding		886		chr11	TogoVar
SLC26A4_chr7_107655828_107722809	107699597	T T	TCCAAGAG others(45): Show TCCAAGAGTTTTTGTAACCTGTTGTCTCCCTATTCAAGAAAAGTTGTAGA GGC	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	366	0.0027	52	c.161 others(69): Show c.1615-484_1615-433dupCAAGAGTTTTTGTAACCTGTTGTCTCCC TATTCAAGAAAAGTTGTAGAGGCC	SLC26A4	ENSG00000091137.14	transcript	ENST00000644269.2	protein_coding	14/20		INFO_REALIGN_3_PRIME	chr7	TogoVar
SLC27A4_chr9_128335527_128366470	128364295	T T	TTTTTTTT others(45): Show TTTTTTTTTGGTTTTGTTTTTGTTTGTTTTTTTTGTTTTTTTTTTTTTTT TTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0077 a0001c0001t0002g0077	1	344	0.0029	52	c.38 others(63): Show c.3804_*3805insTTTTTTTTGGTTTTGTTTTTGTTTGTTTTTTTTG TTTTTTTTTTTTTTTTTG	SLC27A4	ENSG00000167114.13	transcript	ENST00000300456.5	protein_coding		2826		chr9	TogoVar
SLC28A1_chr15_84879662_84950798	84928551	T T	TCTCTCTC others(45): Show TCTCTCTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0027 a0027	a0027c0040 a0027c0040	a0027c0040t0001 a0027c0040t0001	a0027c0040t0001g0273 a0027c0040t0001g0273	1	396	0.0025	52	c.108 others(71): Show c.1083+4441_1083+4442insCTCTCTCTTTCCTTCCTTCCTTCCTT CCTTCCTTCCTTCCTTCCTTCCTTCC	SLC28A1	ENSG00000156222.12	transcript	ENST00000394573.6	protein_coding	12/18			chr15	TogoVar
SLC28A1_chr15_84879662_84950798	84928559	T T	TCTCTCTC others(45): Show TCTCTCTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCC	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0183 a0001c0002t0002g0183	1	396	0.0025	52	c.108 others(71): Show c.1083+4449_1083+4450insCTCTCTCTTTCCTTCCTTCCTTCCTT CCTTCCTTCCTTCCTTCCTTCCTTCC	SLC28A1	ENSG00000156222.12	transcript	ENST00000394573.6	protein_coding	12/18			chr15	TogoVar
SLC28A1_chr15_84879662_84950798	84928591	T T	TTTCCTTC others(45): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0013 a0001c0004t0013	a0001c0004t0013g0195 a0001c0004t0013g0195	1	396	0.0025	52	c.108 others(71): Show c.1083+4484_1083+4485insCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTC	SLC28A1	ENSG00000156222.12	transcript	ENST00000394573.6	protein_coding	12/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLC2A13_chr12_39750025_40111081	39895631	T T	TATGTATA others(45): Show TATGTATATGCGTGTATACGTACACACATATGTATATGCGTGTATACGTA CAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0098 a0001c0001t0001g0098	1	214	0.0047	52	c.103 others(73): Show c.1035-23722_1035-23671dupGTGTACGTATACACGCATATACAT ATGTGTGTACGTATACACGCATATACAT	SLC2A13	ENSG00000151229.13	transcript	ENST00000280871.9	protein_coding	4/9			chr12	TogoVar
SLC2A14_chr12_7807514_7877915	7826834	T T	TTTCCTTC others(45): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCC	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0084 a0001c0008t0001g0084	1	350	0.0029	52	c.864 others(67): Show c.864+660_864+661insGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG AAGGAAGGAAGGAAGGAAGGAA	SLC2A14	ENSG00000173262.12	transcript	ENST00000431042.7	protein_coding	7/10			chr12	TogoVar
SLC2A14_chr12_7807514_7877915	7826853	C C	CCTTCCTT others(45): Show CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC TTT	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01993.hp2 NA18945.hp1 others(1): Show HG01943.hp1 HG01993.hp2 NA18945.hp1 NA18995.hp1	a0001 a0001	a0001c0003 a0001c0006 a0001c0003 a0001c0006	a0001c0003t0001 a0001c0006t0004 a0001c0003t0001 a0001c0006t0004	a0001c0003t0001g0024 a0001c0003t0001g0056 a0001c0006t0004g0073 others(1): Show a0001c0003t0001g0024 a0001c0003t0001g0056 a0001c0006t0004g0073 a0001c0006t0004g0349	4	350	0.0114	52	c.864 others(67): Show c.864+641_864+642insAAAGGAAGGAAGGAAGGAAGGAAGGAAGGA AGGAAGGAAGGAAGGAAGGAAG	SLC2A14	ENSG00000173262.12	transcript	ENST00000431042.7	protein_coding	7/10			chr12	TogoVar
SLC2A14_chr12_7807514_7877915	7826853	C C	CCTTCCTT others(45): Show CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTC TTT	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0221 a0001c0003t0001g0221	1	350	0.0029	52	c.864 others(67): Show c.864+641_864+642insAAAGAAAGAAAGGAAGGAAGGAAGGAAGGA AGGAAGGAAGGAAGGAAGGAAG	SLC2A14	ENSG00000173262.12	transcript	ENST00000431042.7	protein_coding	7/10			chr12	TogoVar
SLC2A9_chr4_9821224_10026497	9887933	T T	TAGTTGGC others(45): Show TAGTTGGCATCAGGCAATATGAGCAATTTTCACAGCTTTATCACATTTAT AAA	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0004 a0004	a0004c0002 a0004c0002	a0004c0002t0001 a0004c0002t0001	a0004c0002t0001g0077 a0004c0002t0001g0077	1	336	0.0030	52	c.121 others(69): Show c.1216-343_1216-292dupTTTATAAATGTGATAAAGCTGTGAAAAT TGCTCATATTGCCTGATGCCAACT	SLC2A9	ENSG00000109667.12	transcript	ENST00000264784.8	protein_coding	9/11			chr4	TogoVar
SLC2A9_chr4_9821224_10026497	9931962	C C	CAATCTCT others(45): Show CAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT ATA	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0001 a0002c0008t0001	a0002c0008t0001g0221 a0002c0008t0001g0221	1	336	0.0030	52	c.814 others(69): Show c.814+9950_814+9951insTATAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGATT	SLC2A9	ENSG00000109667.12	transcript	ENST00000264784.8	protein_coding	6/11			chr4	TogoVar
SLC2A9_chr4_9821224_10026497	9931962	C C	CTCTCTCT others(45): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATAT ATA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0001 a0001c0016t0001	a0001c0016t0001g0247 a0001c0016t0001g0247	1	336	0.0030	52	c.814 others(69): Show c.814+9950_814+9951insTATATATATATATAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGA	SLC2A9	ENSG00000109667.12	transcript	ENST00000264784.8	protein_coding	6/11			chr4	TogoVar
SLC30A5_chr5_69089014_69136069	69118311	G G	GTGTGTAT others(45): Show GTGTGTATATATATATATATATATATATGTGTATATATATATATATATAT ATA	intron_variant intron_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0235 a0001c0002t0001g0235	1	408	0.0025	52	c.144 others(69): Show c.1440-187_1440-186insGTGTATATATATATATATATATATATGT GTATATATATATATATATATATAT	SLC30A5	ENSG00000145740.20	transcript	ENST00000396591.8	protein_coding	11/15		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC35B3_chr6_8406435_8440545	8439066	C C	CCCTCCCT others(45): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTC CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	412	0.0024	52	c.-38 others(63): Show c.-3818_-3817insAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGA GGGAGGGAGGGAGGGAGG	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		3522		chr6	TogoVar
SLC35B3_chr6_8406435_8440545	8439066	C C	CCCTCCCT others(45): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTC CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG02723.hp1 HG04184.hp2 HG00438.hp2 HG02723.hp1 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0001 a0001c0001t0004 a0001c0002t0001	a0001c0001t0004g0010 a0001c0001t0004g0078 a0001c0002t0001g0118 a0001c0001t0004g0010 a0001c0001t0004g0078 a0001c0002t0001g0118	3	412	0.0073	52	c.-38 others(63): Show c.-3818_-3817insAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGA GGGAGGGAGGGAGGGAGG	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		3522		chr6	TogoVar
SLC35B3_chr6_8406435_8440545	8439066	C C	CCCTCCCT others(45): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTC CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG03669.hp2 HG03831.hp2 others(6): Show HG02486.hp1 HG03669.hp2 HG03831.hp2 NA18940.hp1 NA18966.hp1 NA18972.hp1 NA19000.hp1 NA19070.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0141 others(2): Show a0001c0001t0001g0013 a0001c0001t0001g0030 a0001c0001t0001g0141 a0001c0001t0001g0144 a0001c0001t0002g0009	9	412	0.0218	52	c.-38 others(63): Show c.-3818_-3817insAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGA GGGAGGGAGGGAGGGAGG	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		3522		chr6	TogoVar
SLC35B3_chr6_8406435_8440545	8439066	C C	CCCTCCCT others(45): Show CCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02027.hp1 HG02040.hp2 HG02027.hp1 HG02040.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0054 a0001c0001t0014g0054	2	412	0.0049	52	c.-38 others(63): Show c.-3818_-3817insAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGA GGGAGGGAGGGAGGGAGG	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		3522		chr6	TogoVar
SLC35C1_chr11_45800149_45818016	45815419	A A	AATTGATA others(45): Show AATTGATACAGTATCAATTATTATAGAATTGATACAGTATCAATTATTAT AGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18962.hp1 NA18962.hp2 NA18963.hp2 others(1): Show NA18962.hp1 NA18962.hp2 NA18963.hp2 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0002g0001 a0001c0001t0001g0002 a0001c0001t0002g0001	4	428	0.0094	52	c.40 others(63): Show c.4084_*4085insATTGATACAGTATCAATTATTATAGAATTGATAC AGTATCAATTATTATAGC	SLC35C1	ENSG00000181830.9	transcript	ENST00000314134.4	protein_coding		2404		chr11	TogoVar
SLC35D1_chr1_66994350_67059148	67013157	G G	GATATATA others(45): Show GATATATATATATATATATATATATATATATATATATATATATATATATA TAT	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02273.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0143 a0001c0001t0005g0143	1	310	0.0032	52	c.877 others(69): Show c.877-3991_877-3990insATATATATATATATATATATATATATAT ATATATATATATATATATATATAT	SLC35D1	ENSG00000116704.8	transcript	ENST00000235345.6	protein_coding	10/11			chr1	TogoVar
SLC35F1_chr6_117902264_118322671	117923794	C C	CATATATA others(45): Show CATATATACATATACACATACATATGTATATATACATATACACATACATA TGT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01123.hp2 HG01346.hp2 others(3): Show HG00733.hp1 HG01123.hp2 HG01346.hp2 NA18946.hp1 NA18979.hp1 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0013 others(2): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0013 a0001c0001t0034 a0001c0001t0036	a0001c0001t0002g0125 a0001c0001t0002g0142 a0001c0001t0006g0052 others(3): Show a0001c0001t0002g0125 a0001c0001t0002g0142 a0001c0001t0006g0052 a0001c0001t0013g0129 a0001c0001t0034g0136 a0001c0001t0036g0144	6	182	0.0330	52	c.173 others(71): Show c.173+15939_173+15940insACATATGTATATATACATATACACAT ACATATGTATATATACATATACACAT	SLC35F1	ENSG00000196376.11	transcript	ENST00000360388.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
SLC35F3_chr1_233899676_234329511	234267519	A A	ACCTCCCT others(45): Show ACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCC CGG	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01361.hp2 HG02055.hp2 others(5): Show HG00642.hp1 HG01361.hp2 HG02055.hp2 HG02818.hp2 HG02897.hp1 HG03209.hp1 HG03225.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0001 a0001c0001t0003 a0001c0001t0009	a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0056 others(5): Show a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0086 a0001c0001t0001g0109 a0001c0001t0003g0105 a0001c0001t0003g0121 a0001c0001t0009g0084	8	158	0.0506	52	c.608 others(71): Show c.608+35809_608+35810insGGGGGGCTGACCCCCCCCCGGCCTCC CTCCCGGACGGGGCGGCTGGCCGGGC	SLC35F3	ENSG00000183780.13	transcript	ENST00000366618.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC36A1_chr5_151442603_151497379	151458356	T T	TATACATA others(45): Show TATACATACACTTGTATATATATATATATATATATATATATATATATACA CAC	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0131 a0001c0001t0009g0131	1	404	0.0025	52	c.-5- others(65): Show c.-5-431_-5-430insTACATACACTTGTATATATATATATATATATA TATATATATATATACACACA	SLC36A1	ENSG00000123643.14	transcript	ENST00000243389.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC39A14_chr8_22362278_22427736	22423786	T T	TTCTCTCT others(45): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0003 a0003	a0003c0001 a0003c0001	a0003c0001t0001 a0003c0001t0001	a0003c0001t0001g0171 a0003c0001t0001g0171	1	324	0.0031	52	c.40 others(63): Show c.4088_*4089insTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTC	SLC39A14	ENSG00000104635.15	transcript	ENST00000359741.10	protein_coding		1051		chr8	TogoVar
SLC41A3_chr3_126001357_126089124	126059263	G G	GAAAGAAA others(45): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAGAAAGAAAGAAAGAA AGA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	370	0.0027	52	c.274 others(69): Show c.274-8214_274-8213insTCTTTCTTTCTTTCTTTCTCTTTCTTTT CTTTCTTTCTTTCTTTCTTTCTTT	SLC41A3	ENSG00000114544.17	transcript	ENST00000360370.9	protein_coding	2/10			chr3	TogoVar
SLC41A3_chr3_126001357_126089124	126059263	G G	GAAAGAAA others(45): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAGAAAGAAAGAA AGA	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0313 a0001c0001t0001g0313	1	370	0.0027	52	c.274 others(69): Show c.274-8214_274-8213insTCTTTCTTTCTTTCTCTTTCTTTTCTTT CTTTCTTTCTTTCTTTCTTTCTTT	SLC41A3	ENSG00000114544.17	transcript	ENST00000360370.9	protein_coding	2/10			chr3	TogoVar
SLC45A1_chr1_8313114_8349165	8322332	A A	ATGGGTGG others(45): Show ATGGGTGGATGGATGGATGGGTGGGTGGGTGGGTGGATGGATGAGTGGGT GAG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00639.hp2 others(42): Show HG00099.hp1 HG00099.hp2 HG00639.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp2 HG01109.hp2 HG01123.hp2 HG01175.hp2 HG01261.hp1 HG01358.hp1 HG01433.hp1 HG01515.hp2 HG01517.hp1 HG01934.hp2 HG01978.hp1 HG01981.hp2 HG02015.hp2 HG02071.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02451.hp1 HG02486.hp1 HG02602.hp1 HG02602.hp2 HG02735.hp2 HG02896.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03669.hp2 HG04184.hp1 HG04199.hp2 HG04228.hp1 NA18948.hp1 NA19070.hp1 NA19085.hp1 NA19087.hp1 NA20752.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0004 others(2): Show a0001c0001 a0001c0005 a0002c0004 a0002c0009 a0002c0013	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0002c0004t0001 a0002c0004t0002 a0002c0009t0001 a0002c0013t0001	a0001c0001t0001g0321 a0001c0001t0002g0312 a0001c0001t0002g0313 others(40): Show a0001c0001t0001g0321 a0001c0001t0002g0312 a0001c0001t0002g0313 a0001c0001t0002g0314 a0001c0001t0002g0315 a0001c0005t0001g0032 a0001c0005t0001g0294 a0001c0005t0001g0296 a0001c0005t0001g0297 a0001c0005t0001g0303 a0001c0005t0001g0308 a0002c0004t0001g0029 a0002c0004t0001g0030 a0002c0004t0001g0031 a0002c0004t0001g0040 a0002c0004t0001g0283 a0002c0004t0001g0284 a0002c0004t0001g0285 a0002c0004t0001g0286 a0002c0004t0001g0287 a0002c0004t0001g0288 a0002c0004t0001g0289 a0002c0004t0001g0290 a0002c0004t0001g0291 a0002c0004t0001g0292 a0002c0004t0001g0293 a0002c0004t0001g0295 a0002c0004t0001g0298 a0002c0004t0001g0299 a0002c0004t0001g0300 a0002c0004t0001g0304 a0002c0004t0001g0305 a0002c0004t0001g0310 a0002c0004t0001g0316 a0002c0004t0001g0317 a0002c0004t0001g0318 a0002c0004t0002g0031 a0002c0009t0001g0029 a0002c0009t0001g0301 a0002c0009t0001g0302 a0002c0009t0001g0307 a0002c0009t0001g0320 a0002c0013t0001g0306	45	388	0.1160	52	c.-24 others(69): Show c.-24-1971_-24-1970insGTGGATGGATGGATGGGTGGGTGGGTGG GTGGATGGATGAGTGGGTGAGTGG	SLC45A1	ENSG00000162426.16	transcript	ENST00000471889.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLC45A4_chr8_141202174_141313288	141203331	A A	AGAGAGAG others(45): Show AGAGAGAGAGGAGAGGAGAGAGAGAGAGAGGAGAGAGGGAGAGAGGGAGA GAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0008 a0004c0007t0008	a0004c0007t0008g0026 a0004c0007t0008g0026	1	188	0.0053	52	c.82 others(63): Show c.8240_*8241insCTCTCTCCCTCTCTCCCTCTCTCCTCTCTCTCTC TCTCCTCTCCTCTCTCTC	SLC45A4	ENSG00000022567.10	transcript	ENST00000517878.6	protein_coding		3842		chr8	TogoVar
SLC46A2_chr9_112873920_112895876	112890776	C C	CGGAGCGC others(45): Show CGGAGCGCGAGTGTGCTCCGTGCGCCGGGAGCGCGAGTGTGCTCCGTGCG CCG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19079.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0068 a0001c0001t0016g0068	1	446	0.0022	52	c.-14 others(60): Show c.-147_-96dupCGGCGCACGGAGCACACTCGCGCTCCCGGCGCACGGA GCACACTCGCGCTCC	SLC46A2	ENSG00000119457.8	transcript	ENST00000374228.5	protein_coding	1/4	96		chr9	TogoVar
SLC66A2_chr18_79897420_79956653	79944960	G G	GGGGGAAC others(45): Show GGGGGAACCCCACAGCCCCCTCAGCACCCCCTTATCAACACAGAGCAGAA GCA	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0213 a0001c0001t0008g0213	1	352	0.0028	52	c.204 others(69): Show c.204-1499_204-1498insTGCTTCTGCTCTGTGTTGATAAGGGGGT GCTGAGGGGGCTGTGGGGTTCCCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	2/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79944970	C C	CACAGCCC others(45): Show CACAGCCCCCTCAGCACCCCCTTATCAACACAGAGCAGAAGCAGGGGAAC CCA	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0176 a0001c0001t0004g0176	1	352	0.0028	52	c.204 others(69): Show c.204-1509_204-1508insTGGGTTCCCCTGCTTCTGCTCTGTGTTG ATAAGGGGGTGCTGAGGGGGCTGT	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	2/5			chr18	TogoVar
SLC6A15_chr12_84854491_84917799	84910927	C C	CTCTCTCT others(45): Show CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT GTG	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0191 a0001c0002t0004g0191	1	218	0.0046	52	c.-18 others(71): Show c.-189+1595_-189+1596insCACACAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGA	SLC6A15	ENSG00000072041.18	transcript	ENST00000266682.10	protein_coding	1/11			chr12	TogoVar
SLC6A2_chr16_55650988_55711192	55711184	T T	TATACATA others(45): Show TATACATATATATATACATATATATACATACATATATATATACATATATA TAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0157 a0001c0001t0004g0157	1	398	0.0025	52	c.88 others(63): Show c.8838_*8839insATACATATATATATACATATATATACATACATAT ATATATACATATATATAC	SLC6A2	ENSG00000103546.19	transcript	ENST00000568943.6	protein_coding		4993		chr16	TogoVar
SLC6A2_chr16_55650988_55711192	55711184	T T	TATACATA others(45): Show TATACATATATATATACATATATATATATACATATATATATACATATATA TAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp1 HG02717.hp2 NA19043.hp1 others(1): Show HG01361.hp1 HG02717.hp2 NA19043.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0004 a0001c0001t0004 a0001c0002t0004	a0001c0001t0004g0025 a0001c0001t0004g0039 a0001c0001t0004g0368 others(1): Show a0001c0001t0004g0025 a0001c0001t0004g0039 a0001c0001t0004g0368 a0001c0002t0004g0042	4	398	0.0101	52	c.88 others(63): Show c.8838_*8839insATACATATATATATACATATATATATATACATAT ATATATACATATATATAC	SLC6A2	ENSG00000103546.19	transcript	ENST00000568943.6	protein_coding		4993		chr16	TogoVar
SLC9A6_chrX_135980435_136052269	136023163	G G	GTATATAT others(45): Show GTATATATATATATATATATATATATATATATATATATATATATATATAT ATA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0043	1	199	0.0050	52	c.130 others(69): Show c.1306+475_1306+526dupTATATATATATATATATATATATATATA TATATATATATATATATATATATA	SLC9A6	ENSG00000198689.13	transcript	ENST00000630721.3	protein_coding	12/17		INFO_REALIGN_3_PRIME	chrX	TogoVar
SLC9A8_chr20_49807828_49897242	49884225	C C	CACACACA others(45): Show CACACACACACACGACACACACACACACGACACACACACACACGACACAC ACG	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0194 a0001c0001t0028g0194	1	360	0.0028	52	c.149 others(69): Show c.1491+171_1491+172insGACACACACACACACGACACACACACAC ACGACACACACGACACACACACAC	SLC9A8	ENSG00000197818.12	transcript	ENST00000361573.3	protein_coding	14/15		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLCO1B3_chr12_20805705_20921911	20918434	G G	GTATGTGT others(45): Show GTATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATAT ATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0266 a0001c0001t0003g0266	1	284	0.0035	52	c.21 others(63): Show c.2187_*2188insTATGTGTGTGTGTGTGTGTATATATATATATATA TATATATATATATATATA	SLCO1B3	ENSG00000111700.13	transcript	ENST00000381545.8	protein_coding		1524		chr12	TogoVar
SLCO1B3_chr12_20805705_20921911	20918434	G G	GTATGTGT others(45): Show GTATGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATAT ATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG00738.hp1 HG03831.hp1 others(2): Show HG00642.hp2 HG00738.hp1 HG03831.hp1 NA18965.hp2 NA19091.hp1	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0003 a0002c0003t0003 a0002c0002t0003 a0002c0003t0003	a0002c0002t0003g0243 a0002c0002t0003g0244 a0002c0002t0003g0247 others(2): Show a0002c0002t0003g0243 a0002c0002t0003g0244 a0002c0002t0003g0247 a0002c0003t0003g0254 a0002c0003t0003g0262	5	284	0.0176	52	c.21 others(63): Show c.2187_*2188insTATGTGTGTGTGTGTGTGTGTATATATATATATA TATATATATATATATATA	SLCO1B3	ENSG00000111700.13	transcript	ENST00000381545.8	protein_coding		1524		chr12	TogoVar

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