Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TBC1D2B_chr15_77989985_78082711	77992852	C C	CCCCCCCA others(46): Show CCCCCCCACTCCACTCCCCCCCACTCCCCCCCACTCCCCCCCACTCCCCC CACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0044 a0002c0003t0044	a0002c0003t0044g0221 a0002c0003t0044g0221	1	280	0.0036	53	c.53 others(64): Show c.5307_*5308insAGTGGGGGGAGTGGGGGGGAGTGGGGGGGAGTGG GGGGGAGTGGAGTGGGGGG	TBC1D2B	ENSG00000167202.12	transcript	ENST00000300584.8	protein_coding		2132		chr15	TogoVar
TBC1D3G_chr17_36318884_36339759	36335453	T T	TTGTTTGG others(46): Show TTGTTTGGATTTAGGACTGCAGCTCACTAGATATTCCAGACACAGGCATG TTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0035 a0002c0002t0002g0035	1	148	0.0068	53	c.10 others(64): Show c.1009_*1010insTGTTTGGATTTAGGACTGCAGCTCACTAGATATT CCAGACACAGGCATGTTCC	TBC1D3G	ENSG00000260287.4	transcript	ENST00000569055.2	protein_coding		695		chr17	TogoVar
TBCD_chr17_82747065_82950914	82751103	T T	TCCCCCCG others(46): Show TCCCCCCGGCCCCCCGTCCCCTCCCCCCATCCCTGTCCCCCCCGTCCCCC TGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0009 a0002c0010t0009	a0002c0010t0009g0166 a0002c0010t0009g0166	1	318	0.0031	53	c.-10 others(64): Show c.-1091_-1090insCCCCCCGGCCCCCCGTCCCCTCCCCCCATCCCTG TCCCCCCCGTCCCCCTGTG	TBCD	ENSG00000141556.22	transcript	ENST00000355528.9	protein_coding		961		chr17	TogoVar
TCF20_chr22_42155013_42275653	42219355	C C	CAAAAAAA others(46): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	355	0.0028	53	c.-36 others(70): Show c.-36-4015_-36-4014insTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTT	TCF20	ENSG00000100207.21	transcript	ENST00000677622.1	protein_coding	1/5			chr22	TogoVar
TCF25_chr16_89868592_89916379	89869053	A A	AAAAAAAA others(46): Show AAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATAT ATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0191 a0002c0003t0001g0191	1	300	0.0033	53	c.-46 others(64): Show c.-4615_-4614insAAAAAAAAAAAAAAAAAATATATATATATATATA TATATATATATATATATAT	TCF25	ENSG00000141002.20	transcript	ENST00000263346.13	protein_coding		4538		chr16	TogoVar
TECPR2_chr14_102357941_102507477	102458182	T T	TAAATTCT others(46): Show TAAATTCTGCTGGAAAGACCAGAGTGCTCTTTTGGCCAGTCGCTCAGCAG TGTC	intron_variant intron_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0186 a0002c0002t0001g0186	1	334	0.0030	53	c.364 others(72): Show c.3640+5556_3640+5608dupAAATTCTGCTGGAAAGACCAGAGTGC TCTTTTGGCCAGTCGCTCAGCAGTGTC	TECPR2	ENSG00000196663.16	transcript	ENST00000359520.12	protein_coding	16/19		INFO_REALIGN_3_PRIME	chr14	TogoVar
TECTB_chr10_112278400_112310038	112304736	G G	GTAATAGA others(46): Show GTAATAGACCCATTTAGTAATAGACCCATTAGTAATACTAATAGACCCAT TTAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01243.hp1 HG02109.hp1 HG02145.hp1 others(13): Show HG01243.hp1 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02280.hp1 HG02572.hp1 HG02622.hp1 HG02647.hp1 HG02886.hp1 HG02922.hp2 HG03195.hp1 HG03209.hp2 NA18522.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0001t0011 a0001c0001t0015 others(5): Show a0001c0001t0005 a0001c0001t0011 a0001c0001t0015 a0001c0001t0023 a0001c0002t0005 a0001c0002t0011 a0001c0002t0017 a0001c0002t0022	a0001c0001t0005g0063 a0001c0001t0005g0106 a0001c0001t0005g0256 others(12): Show a0001c0001t0005g0063 a0001c0001t0005g0106 a0001c0001t0005g0256 a0001c0001t0005g0271 a0001c0001t0011g0101 a0001c0001t0015g0140 a0001c0001t0023g0111 a0001c0002t0005g0038 a0001c0002t0005g0171 a0001c0002t0005g0172 a0001c0002t0005g0253 a0001c0002t0005g0348 a0001c0002t0011g0261 a0001c0002t0017g0152 a0001c0002t0022g0347	16	438	0.0365	53	c.14 others(64): Show c.1430_*1431insACCCATTTAGTAATAGACCCATTAGTAATACTAA TAGACCCATTTACTAATAG	TECTB	ENSG00000119913.6	transcript	ENST00000646139.2	protein_coding	11/11	1431	INFO_REALIGN_3_PRIME	chr10	TogoVar
TENM2_chr5_166974029_168269157	167974083	A A	AAGGAAGG others(46): Show AAGGAAGGAAGGGAAGGAAGGAAGGGAGAAAGGGAGGGAGGGAGGGAGGG AGGG	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0002 a0001c0008t0002	a0001c0008t0002g0035 a0001c0008t0002g0035	1	54	0.0185	53	c.948 others(72): Show c.948-18854_948-18853insAAGGGAAGGAAGGAAGGGAGAAAGGG AGGGAGGGAGGGAGGGAGGGAGGAAGG	TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	6/30		INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	167974136	A A	AAGGAAGG others(46): Show AAGGAAGGAAGGGAAGGAAGGAAGGGAGAAAGGGAGGGAGGGAGGGAGGG AGGG	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0002 a0001c0008t0002	a0001c0008t0002g0035 a0001c0008t0002g0035	1	54	0.0185	53	c.948 others(72): Show c.948-18801_948-18800insAAGGGAAGGAAGGAAGGGAGAAAGGG AGGGAGGGAGGGAGGGAGGGAGGAAGG	TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	6/30		INFO_REALIGN_3_PRIME	chr5	TogoVar
TERT_chr5_1248167_1300068	1272940	C C	CACGACCG others(46): Show CACGACCGCCATCCACAGTCACATCAGACCCCACGACCGCCATCCACAGT CACA	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02735.hp2 HG02895.hp1 others(2): Show HG01069.hp2 HG02735.hp2 HG02895.hp1 HG03669.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0351 a0001c0001t0001g0358 a0001c0001t0001g0365 others(2): Show a0001c0001t0001g0351 a0001c0001t0001g0358 a0001c0001t0001g0365 a0001c0002t0001g0102 a0001c0002t0001g0106	5	392	0.0128	53	c.228 others(70): Show c.2287-661_2287-660insTGTGACTGTGGATGGCGGTCGTGGGGTC TGATGTGACTGTGGATGGCGGTCGT	TERT	ENSG00000164362.21	transcript	ENST00000310581.10	protein_coding	6/15			chr5	TogoVar
TET3_chr2_73979910_74113176	74032464	T T	TGTGTGTG others(46): Show TGTGTGTGTGTGTGTGTGCGCGCGCGCGCGATGGCCCCAGCGGCTGCAAG AGGG	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0055 a0001c0002t0055	a0001c0002t0055g0145 a0001c0002t0055g0145	1	252	0.0040	53	c.361 others(72): Show c.361-13797_361-13796insCGCGCGCGCGCGATGGCCCCAGCGGC TGCAAGAGGGGTGTGTGTGTGTGTGTG	TET3	ENSG00000187605.16	transcript	ENST00000409262.8	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TET3_chr2_73979910_74113176	74032468	T T	TGTGTGTG others(46): Show TGTGTGTGTGTGTGTGCGCGCGCGCGCGCGATGGCCCCAGCGGCTGCAAG AGGG	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0175 a0001c0002t0002g0175	1	252	0.0040	53	c.361 others(72): Show c.361-13795_361-13794insCGCGCGCGCGCGCGATGGCCCCAGCG GCTGCAAGAGGGGTGTGTGTGTGTGTG	TET3	ENSG00000187605.16	transcript	ENST00000409262.8	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr2	TogoVar
TEX19_chr17_82354247_82368775	82360885	C C	CAAGTTCC others(46): Show CAAGTTCCCTCAAGTTTCCCTCAGTTTCCCTCAAGTTTCCCTCAGTTTCC CTCA	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp2 HG02559.hp2 others(4): Show HG01884.hp1 HG02055.hp2 HG02559.hp2 HG02622.hp1 HG02895.hp1 HG02897.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0011 a0001c0001t0004g0012 a0001c0001t0004g0055 a0001c0001t0004g0011 a0001c0001t0004g0012 a0001c0001t0004g0055	7	380	0.0184	53	c.-27 others(70): Show c.-271-994_-271-993insAGTTCCCTCAAGTTTCCCTCAGTTTCCC TCAAGTTTCCCTCAGTTTCCCTCAA	TEX19	ENSG00000182459.5	transcript	ENST00000333437.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr17	TogoVar
TEX30_chr13_102760888_102778786	102776100	C C	CATATATA others(46): Show CATATATATGATATGTATGTATATACATATATATGTATATGTATATACAT ATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp1 HG02572.hp2 HG02622.hp2 others(8): Show HG01081.hp1 HG02572.hp2 HG02622.hp2 HG02723.hp1 HG02809.hp2 HG02965.hp2 HG02976.hp2 HG03195.hp1 HG03516.hp2 HG03579.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0001 a0001c0001t0002g0055 a0001c0001t0002g0056 others(1): Show a0001c0001t0002g0001 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0003g0008	11	454	0.0242	53	c.-24 others(64): Show c.-2480_-2479insATATATGTATATACATATACATATATATGTATAT ACATACATATCATATATAT	TEX30	ENSG00000151287.17	transcript	ENST00000376032.9	protein_coding		2315		chr13	TogoVar
TFDP1_chr13_113579753_113646473	113625626	C C	CTCAGGCG others(46): Show CTCAGGCGTCTCTCACGTGTCCTCAGGTGTCTCTCAGGCGTCTCTCACAT GTCT	intron_variant intron_variant	MODIFIER	HG02735.hp2 NA19009.hp2 HG02735.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0234 a0001c0001t0001g0177 a0001c0001t0001g0234	2	348	0.0058	53	c.186 others(70): Show c.186+2366_186+2367insTGTCTCTCAGGCGTCTCTCACATGTCTT CAGGCGTCTCTCACGTGTCCTCAGG	TFDP1	ENSG00000198176.13	transcript	ENST00000375370.10	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr13	TogoVar
TFDP1_chr13_113579753_113646473	113636741	A A	ATGGCCCC others(46): Show ATGGCCCCCAGCCTCCGACGGTGCCCTCCCCTCCCGGCTCGGCTGTGTGA GGAG	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02559.hp1 HG02615.hp2 others(2): Show HG02145.hp1 HG02559.hp1 HG02615.hp2 HG03041.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0009 a0001c0001t0001g0037 a0001c0001t0003g0031 others(1): Show a0001c0001t0001g0009 a0001c0001t0001g0037 a0001c0001t0003g0031 a0001c0001t0003g0032	5	348	0.0144	53	c.100 others(68): Show c.1006+82_1006+83insCTGTGTGAGGAGTGGCCCCCAGCCTCCGAC GGTGCCCTCCCCTCCCGGCTCGG	TFDP1	ENSG00000198176.13	transcript	ENST00000375370.10	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr13	TogoVar
THEG_chr19_356747_381026	376717	T T	TGTACCCC others(46): Show TGTACCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02970.hp1 HG03471.hp2 others(1): Show HG02145.hp2 HG02970.hp1 HG03471.hp2 NA18522.hp2	a0004 a0004	a0004c0007 a0004c0020 a0004c0007 a0004c0020	a0004c0007t0015 a0004c0007t0028 a0004c0007t0030 others(1): Show a0004c0007t0015 a0004c0007t0028 a0004c0007t0030 a0004c0020t0033	a0004c0007t0015g0022 a0004c0007t0028g0026 a0004c0007t0030g0020 others(1): Show a0004c0007t0015g0022 a0004c0007t0028g0026 a0004c0007t0030g0020 a0004c0020t0033g0021	4	370	0.0108	53	c.-74 others(62): Show c.-748_-747insGGGGGGGGGAGAGGCTGGGTGGGGCACAGAGGGGGA GAGGCTGGGTGGGGTAC	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		692		chr19	TogoVar
THEG_chr19_356747_381026	376720	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTCT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0007 a0007	a0007c0010 a0007c0010	a0007c0010t0003 a0007c0010t0003	a0007c0010t0003g0185 a0007c0010t0003g0185	1	370	0.0027	53	c.-75 others(62): Show c.-751_-750insGCACAGAGGGGGAGAGGCTGGGTGGGGCACAGAGGG GGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		695		chr19	TogoVar
THEG_chr19_356747_381026	376741	T T	TCTGTGCC others(46): Show TCTGTGCCCCCACCCAGCCTCTCCCCCCCTGTGCCCCACCCAGCCTCTCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0018 a0001c0003t0002g0018	1	370	0.0027	53	c.-77 others(62): Show c.-772_-771insGGGGGGAGAGGCTGGGTGGGGCACAGGGGGGGAGAG GCTGGGTGGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		716		chr19	TogoVar
THEG_chr19_356747_381026	376820	T T	TCTGTACC others(46): Show TCTGTACCCCACCCAGCCTCTCCCCCTCTGTACCCCACCCAGCCTCTCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0029 a0001c0003t0029	a0001c0003t0029g0028 a0001c0003t0029g0028	1	370	0.0027	53	c.-85 others(62): Show c.-851_-850insGGGGGGGAGAGGCTGGGTGGGGTACAGAGGGGGAGA GGCTGGGTGGGGTACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		795		chr19	TogoVar
THEG_chr19_356747_381026	376905	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTCT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG01256.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0221 a0001c0001t0001g0221	1	370	0.0027	53	c.-93 others(62): Show c.-936_-935insGCACAGAGGGGGAGAGGCTGGGTGGGGCACAGAGGG GGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		880		chr19	TogoVar
THEG_chr19_356747_381026	376931	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTCT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0151 a0001c0001t0003g0151	1	370	0.0027	53	c.-96 others(62): Show c.-962_-961insGCACAGAGGGGGAGAGGCTGGGTGGGGCACAGAGGG GGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		906		chr19	TogoVar
THEG_chr19_356747_381026	376951	C C	CTCTGTGC others(46): Show CTCTGTGCCCCACCCAGCCTCTCCCCCTCTGTACCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 NA19070.hp2 HG00438.hp2 NA19070.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0005c0005t0004 a0001c0001t0001 a0005c0005t0004	a0001c0001t0001g0266 a0005c0005t0004g0271 a0001c0001t0001g0266 a0005c0005t0004g0271	2	370	0.0054	53	c.-98 others(62): Show c.-982_-981insAGGGGGAGAGGCTGGGTGGGGTACAGAGGGGGAGAG GCTGGGTGGGGCACAGA	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		926		chr19	TogoVar
THEG_chr19_356747_381026	376951	C C	CTCTGTGC others(46): Show CTCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0072 a0001c0009t0002g0072	1	370	0.0027	53	c.-98 others(62): Show c.-982_-981insAGGGGGAGAGGCTGGGTGGGGCACAGAGGGGGAGAG GCTGGGTGGGGCACAGA	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		926		chr19	TogoVar
THEG_chr19_356747_381026	376971	T T	TCCCCCTC others(46): Show TCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCCTGTGCCCCACCCAGCCT CTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp1 HG01934.hp2 HG02148.hp1 others(1): Show HG01358.hp1 HG01934.hp2 HG02148.hp1 HG02300.hp2	a0001 a0001	a0001c0001 a0001c0029 a0001c0001 a0001c0029	a0001c0001t0003 a0001c0029t0001 a0001c0001t0003 a0001c0029t0001	a0001c0001t0003g0224 a0001c0001t0003g0228 a0001c0001t0003g0231 others(1): Show a0001c0001t0003g0224 a0001c0001t0003g0228 a0001c0001t0003g0231 a0001c0029t0001g0229	4	370	0.0108	53	c.-10 others(64): Show c.-1002_-1001insGGAGAGGCTGGGTGGGGCACAGGGGGGAGAGGCT GGGTGGGGCACAGAGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		946		chr19	TogoVar
THEG_chr19_356747_381026	377008	C C	CCCCACCC others(46): Show CCCCACCCAGCCTCTCCCCCTCTGTGCCCCCACCCAGCCTCTCCCCCCCC TGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0004 a0005c0005t0004	a0005c0005t0004g0324 a0005c0005t0004g0324	1	370	0.0027	53	c.-10 others(64): Show c.-1039_-1038insCACAGGGGGGGGAGAGGCTGGGTGGGGGCACAGA GGGGGAGAGGCTGGGTGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		983		chr19	TogoVar
THEG_chr19_356747_381026	377057	T T	TGTGCCCC others(46): Show TGTGCCCCACCCAGCCTCTCCCCCCTCTGTGCCCCACCCAGCCTCTCCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0183 a0001c0001t0008g0183	1	370	0.0027	53	c.-10 others(64): Show c.-1088_-1087insGGGGGGGGAGAGGCTGGGTGGGGCACAGAGGGGG GAGAGGCTGGGTGGGGCAC	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1032		chr19	TogoVar
THEG_chr19_356747_381026	377060	G G	GCCCCCAC others(46): Show GCCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTC TGTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0004 a0004	a0004c0020 a0004c0020	a0004c0020t0033 a0004c0020t0033	a0004c0020t0033g0021 a0004c0020t0033g0021	1	370	0.0027	53	c.-10 others(64): Show c.-1091_-1090insTACAGAGGGGGAGAGGCTGGGTGGGGCACAGAGG GGGAGAGGCTGGGTGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1035		chr19	TogoVar
THEG_chr19_356747_381026	377075	T T	TCCCCCCC others(46): Show TCCCCCCCTGTGCCCCCACCCAGCCTCTCCCCCCCGTGCCCCACCCAGCC TCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0053 a0001c0001t0002g0053	1	370	0.0027	53	c.-11 others(64): Show c.-1106_-1105insGAGAGGCTGGGTGGGGCACGGGGGGGAGAGGCTG GGTGGGGGCACAGGGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1050		chr19	TogoVar
THEG_chr19_356747_381026	377080	C C	CCCCGTGC others(46): Show CCCCGTGCCCCACCCAGCCTCTCCCCCCCCGTGCCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0289 a0001c0001t0001g0289	1	370	0.0027	53	c.-11 others(64): Show c.-1111_-1110insAGGGGGAGAGGCTGGGTGGGGCACGGGGGGGGAG AGGCTGGGTGGGGCACGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1055		chr19	TogoVar
THEG_chr19_356747_381026	377163	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCTCTGTACCCCACCCAGCCTCTCCCCCTGT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0328 a0002c0002t0001g0328	1	370	0.0027	53	c.-11 others(64): Show c.-1194_-1193insGCACACAGGGGGAGAGGCTGGGTGGGGTACAGAG GGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1138		chr19	TogoVar
THEG_chr19_356747_381026	377204	T T	TCCCCCTC others(46): Show TCCCCCTCTGTACCCCACCCAGCCTCTCCCCCCCCGTGCCCCACCCAGCC TCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp1 NA18522.hp2 HG02970.hp1 NA18522.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0028 a0004c0007t0030 a0004c0007t0028 a0004c0007t0030	a0004c0007t0028g0026 a0004c0007t0030g0020 a0004c0007t0028g0026 a0004c0007t0030g0020	2	370	0.0054	53	c.-12 others(64): Show c.-1235_-1234insGAGAGGCTGGGTGGGGCACGGGGGGGGAGAGGCT GGGTGGGGTACAGAGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1179		chr19	TogoVar
THEG_chr19_356747_381026	377204	T T	TCCCCCTC others(46): Show TCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCCTGTGCCCCACCCAGCCT CTCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp2 HG01928.hp1 HG02148.hp2 HG01106.hp2 HG01928.hp1 HG02148.hp2	a0001 a0014 a0001 a0014	a0001c0001 a0001c0003 a0014c0021 a0001c0001 a0001c0003 a0014c0021	a0001c0001t0010 a0001c0003t0003 a0014c0021t0003 a0001c0001t0010 a0001c0003t0003 a0014c0021t0003	a0001c0001t0010g0232 a0001c0003t0003g0127 a0014c0021t0003g0128 a0001c0001t0010g0232 a0001c0003t0003g0127 a0014c0021t0003g0128	3	370	0.0081	53	c.-12 others(64): Show c.-1235_-1234insGGAGAGGCTGGGTGGGGCACAGGGGGGAGAGGCT GGGTGGGGCACAGAGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1179		chr19	TogoVar
THEG_chr19_356747_381026	377209	C C	CCTGTGCC others(46): Show CCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0004 a0003c0004t0004	a0003c0004t0004g0292 a0003c0004t0004g0292	1	370	0.0027	53	c.-12 others(64): Show c.-1240_-1239insAGGGGGAGAGGCTGGGTGGGGGCACAGAGGGGGA GAGGCTGGGTGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1184		chr19	TogoVar
THEG_chr19_356747_381026	377288	C C	CCGTGCCC others(46): Show CCGTGCCCCCACCCAGCCTCTCCCCCCCTGTGCCCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0196 a0001c0001t0001g0196	1	370	0.0027	53	c.-13 others(64): Show c.-1319_-1318insAGGGGGAGAGGCTGGGTGGGGGCACAGGGGGGGA GAGGCTGGGTGGGGGCACG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1263		chr19	TogoVar
THEG_chr19_356747_381026	377422	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCCCTGTGCCCCACCCAGCCTCTCCCCCTCT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0180 a0001c0001t0001g0180	1	370	0.0027	53	c.-14 others(64): Show c.-1453_-1452insGCACAGAGGGGGAGAGGCTGGGTGGGGCACAGGG GGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1397		chr19	TogoVar
THEG_chr19_356747_381026	377475	C C	CCCCACCC others(46): Show CCCCACCCAGCCTCTCCCCCCCCTGTGCCCCCACCCAGCCTCTCCCCCTC TGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0076 a0001c0001t0005g0076	1	370	0.0027	53	c.-15 others(64): Show c.-1506_-1505insCACAGAGGGGGAGAGGCTGGGTGGGGGCACAGGG GGGGGAGAGGCTGGGTGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1450		chr19	TogoVar
THEG_chr19_356747_381026	377475	C C	CCCCCACC others(46): Show CCCCCACCCAGCCTCTCCCCCTCTGTACCCCCACCCAGCCTCTCCCCCTC TGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0078 a0001c0001t0018g0078	1	370	0.0027	53	c.-15 others(64): Show c.-1506_-1505insCACAGAGGGGGAGAGGCTGGGTGGGGGTACAGAG GGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1450		chr19	TogoVar
THEG_chr19_356747_381026	377496	T T	TCTGTACC others(46): Show TCTGTACCCCACCCAGCCTCTCCCCCCCCGTGCCCCACCCAGCCTCTCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0034 a0002c0002t0002g0034	1	370	0.0027	53	c.-15 others(64): Show c.-1527_-1526insGGGGGGGAGAGGCTGGGTGGGGCACGGGGGGGGA GAGGCTGGGTGGGGTACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1471		chr19	TogoVar
THEG_chr19_356747_381026	377496	T T	TCTGTGCC others(46): Show TCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG02080.hp2 HG02148.hp1 others(6): Show HG00673.hp1 HG02080.hp2 HG02148.hp1 HG02523.hp1 HG02735.hp1 HG03831.hp2 NA18942.hp1 NA18942.hp2 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0023 a0002c0002 others(1): Show a0001c0001 a0001c0023 a0002c0002 a0002c0014	a0001c0001t0003 a0001c0023t0001 a0002c0002t0001 others(1): Show a0001c0001t0003 a0001c0023t0001 a0002c0002t0001 a0002c0014t0001	a0001c0001t0003g0219 a0001c0001t0003g0224 a0001c0023t0001g0134 others(6): Show a0001c0001t0003g0219 a0001c0001t0003g0224 a0001c0023t0001g0134 a0002c0002t0001g0328 a0002c0002t0001g0331 a0002c0002t0001g0334 a0002c0002t0001g0341 a0002c0014t0001g0135 a0002c0014t0001g0136	9	370	0.0243	53	c.-15 others(64): Show c.-1527_-1526insGGGGGGGAGAGGCTGGGTGGGGCACAGAGGGGGA GAGGCTGGGTGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1471		chr19	TogoVar
THEG_chr19_356747_381026	377523	T T	TCTGTGCC others(46): Show TCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0023 a0006c0006t0023	a0006c0006t0023g0165 a0006c0006t0023g0165	1	370	0.0027	53	c.-15 others(64): Show c.-1554_-1553insGGGGGGGAGAGGCTGGGTGGGGCACAGAGGGGGA GAGGCTGGGTGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1498		chr19	TogoVar
THEG_chr19_356747_381026	377523	T T	TCTGTGCC others(46): Show TCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCCACCCAGCCTCTCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0076 a0001c0001t0005g0076	1	370	0.0027	53	c.-15 others(64): Show c.-1554_-1553insGGGGGGAGAGGCTGGGTGGGGGCACAGAGGGGGA GAGGCTGGGTGGGGCACAG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1498		chr19	TogoVar
THEG_chr19_356747_381026	377528	G G	GCCCCACC others(46): Show GCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTCT GTGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0015 a0004c0007t0015	a0004c0007t0015g0022 a0004c0007t0015g0022	1	370	0.0027	53	c.-15 others(64): Show c.-1559_-1558insGCACAGAGGGGGAGAGGCTGGGTGGGGCACAGAG GGGGAGAGGCTGGGTGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1503		chr19	TogoVar
THEG_chr19_356747_381026	377549	T T	CCTGTGCC others(46): Show CCTGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCCACCCAGCCTCTCC CCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0302 a0001c0001t0001g0302	1	370	0.0027	53	c.-15 others(64): Show c.-1579_-1578insGGGGGAGAGGCTGGGTGGGGGCACAGAGGGGGAG AGGCTGGGTGGGGCACAGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1523		chr19	TogoVar
THEG_chr19_356747_381026	377551	T T	TGTGCCCC others(46): Show TGTGCCCCACCCAGCCTCTCCCCCCCCGTGCCCCACCCAGCCTCTCCCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0314 a0001c0001t0001g0314	1	370	0.0027	53	c.-15 others(64): Show c.-1582_-1581insGGGGGGGGGAGAGGCTGGGTGGGGCACGGGGGGG GAGAGGCTGGGTGGGGCAC	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1526		chr19	TogoVar
THEG_chr19_356747_381026	377554	G G	GCCCCCAC others(46): Show GCCCCCACCCAGCCTCTCCCCCTCTGTGCCCCACCCAGCCTCTCCCCCTC TGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0344 a0001c0001t0003g0344	1	370	0.0027	53	c.-15 others(64): Show c.-1585_-1584insCACAGAGGGGGAGAGGCTGGGTGGGGCACAGAGG GGGAGAGGCTGGGTGGGGG	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1529		chr19	TogoVar
THEG_chr19_356747_381026	377603	T T	TGTGCCCC others(46): Show TGTGCCCCACCCAGCCTCTCCCCCTCTGTGCCCCCACCCAGCCTCTCCCC CCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0108 a0001c0001t0037g0108	1	370	0.0027	53	c.-16 others(64): Show c.-1634_-1633insGGGGGGGGAGAGGCTGGGTGGGGGCACAGAGGGG GAGAGGCTGGGTGGGGCAC	THEG	ENSG00000105549.11	transcript	ENST00000342640.9	protein_coding		1578		chr19	TogoVar
TIAM2_chr6_154990315_155262723	155018704	T T	TCCCCTTC others(46): Show TCCCCTTCCCTTCCCCTCCCCCTCCCCTCCTCCTCTCCCCTCCCCTCCCC CTCC	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0097 a0001c0002t0009g0097	1	230	0.0044	53	c.-20 others(74): Show c.-209+23215_-209+23216insCTTCCCTTCCCCTCCCCCTCCCCT CCTCCTCTCCCCTCCCCTCCCCCTCCCCC	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr6	TogoVar
TIAM2_chr6_154990315_155262723	155027573	A A	ATGTACTG others(46): Show ATGTACTGTGTTACATATATACTATATATATGTACTGTGTTACATATATA CTAT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0028 a0028	a0028c0063 a0028c0063	a0028c0063t0039 a0028c0063t0039	a0028c0063t0039g0068 a0028c0063t0039g0068	1	230	0.0044	53	c.-20 others(74): Show c.-209+32081_-209+32082insTGTACTGTGTTACATATATACTAT ATATATGTACTGTGTTACATATATACTAT	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	1/26			chr6	TogoVar
TIAM2_chr6_154990315_155262723	155027607	A A	ATGTACTG others(46): Show ATGTACTGTGTTACATATATACTATATATATGTACTGTGTTACATATATA CTAT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0112 a0001c0002t0001g0112	1	230	0.0044	53	c.-20 others(74): Show c.-209+32115_-209+32116insTGTACTGTGTTACATATATACTAT ATATATGTACTGTGTTACATATATACTAT	TIAM2	ENSG00000146426.19	transcript	ENST00000682666.1	protein_coding	1/26			chr6	TogoVar

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Search Results (Total: 10000 hits)