Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
DCAF10_chr9_37795797_37872664	37814127	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0266 a0001c0001t0002g0266	1	356	0.0028	11	c.540 others(28): Show c.540-5161_540-5160insATATATATATA	DCAF10	ENSG00000122741.16	transcript	ENST00000377724.8	protein_coding	1/6			chr9	TogoVar
DCAF10_chr9_37795797_37872664	37814127	T T	TATATATA others(4): Show TATATATATTTG	intron_variant intron_variant	MODIFIER	HG04204.hp2 NA20300.hp1 HG04204.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0018 a0001c0001t0003 a0001c0001t0018	a0001c0001t0003g0143 a0001c0001t0018g0342 a0001c0001t0003g0143 a0001c0001t0018g0342	2	356	0.0056	11	c.540 others(28): Show c.540-5161_540-5160insATATATATTTG	DCAF10	ENSG00000122741.16	transcript	ENST00000377724.8	protein_coding	1/6			chr9	TogoVar
DCAF12_chr9_34081387_34131698	34108793	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0113 a0001c0001t0001g0113	1	370	0.0027	11	c.334 others(28): Show c.334-1229_334-1228insTTTTTTTTTTT	DCAF12	ENSG00000198876.13	transcript	ENST00000361264.9	protein_coding	2/8			chr9	TogoVar
DCAF13_chr8_103410386_103448453	103418866	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	342	0.0029	11	c.71- others(26): Show c.71-1397_71-1396insATATATATATT	DCAF13	ENSG00000164934.15	transcript	ENST00000612750.5	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr8	TogoVar
DCAF15_chr19_13947509_13966449	13953699	G G	GTGCCTGG others(4): Show GTGCCTGGCTTC	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0051 a0003c0004t0002g0051	1	400	0.0025	11	c.133 others(26): Show c.133-634_133-624dupGCTTCTGCCTG	DCAF15	ENSG00000132017.11	transcript	ENST00000254337.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr19	TogoVar
DCAF16_chr4_17795655_17815757	17801048	A A	AAGGCTCA others(4): Show AAGGCTCAGCAG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG01884.hp2 others(1): Show HG01109.hp1 HG01243.hp1 HG01884.hp2 HG02970.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0022 a0001c0003t0029 a0001c0003t0022 a0001c0003t0029	a0001c0003t0022g0023 a0001c0003t0029g0045 a0001c0003t0022g0023 a0001c0003t0029g0045	4	424	0.0094	11	c.24 others(22): Show c.2432_*2442dupCTGCTGAGCCT	DCAF16	ENSG00000163257.11	transcript	ENST00000382247.6	protein_coding	3/3	2442		chr4	TogoVar
DCAF1_chr3_51392842_51505015	51451069	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01074.hp2 HG01243.hp2 others(3): Show HG00140.hp1 HG01074.hp2 HG01243.hp2 HG02976.hp2 HG03195.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 others(3): Show a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0088 a0001c0001t0001g0092 a0001c0001t0001g0169	6	274	0.0219	11	c.376 others(28): Show c.376-7177_376-7167dupAAAAAAAAAAA	DCAF1	ENSG00000145041.17	transcript	ENST00000684031.1	protein_coding	6/24			chr3	TogoVar
DCAF4_chr14_72921464_72964703	72928187	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01891.hp2 HG02647.hp1 others(5): Show HG01081.hp1 HG01891.hp2 HG02647.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG03579.hp1 NA19003.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0010c0016	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0002t0004 a0001c0003t0008 a0001c0007t0008 a0010c0016t0006	a0001c0001t0001g0047 a0001c0001t0004g0318 a0001c0002t0001g0200 others(5): Show a0001c0001t0001g0047 a0001c0001t0004g0318 a0001c0002t0001g0200 a0001c0002t0001g0320 a0001c0002t0004g0381 a0001c0003t0008g0266 a0001c0007t0008g0342 a0010c0016t0006g0265	8	396	0.0202	11	c.-9+ others(26): Show c.-9+1657_-9+1667dupTTTTTTTTTTT	DCAF4	ENSG00000119599.17	transcript	ENST00000358377.7	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
DCAF4_chr14_72921464_72964703	72928594	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0246 a0001c0001t0005g0246	1	396	0.0025	11	c.-9+ others(26): Show c.-9+2052_-9+2062dupATATATATATA	DCAF4	ENSG00000119599.17	transcript	ENST00000358377.7	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
DCAF4_chr14_72921464_72964703	72952992	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG04228.hp2 HG01358.hp2 HG04228.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0007 a0002c0004t0007	a0002c0004t0007g0111 a0002c0004t0007g0222 a0002c0004t0007g0111 a0002c0004t0007g0222	2	396	0.0051	11	c.808 others(28): Show c.808+1130_808+1140dupTTTTTTTTTTT	DCAF4	ENSG00000119599.17	transcript	ENST00000358377.7	protein_coding	9/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
DCAF4_chr14_72921464_72964703	72953732	A A	AAATATAT others(4): Show AAATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03225.hp2 HG01891.hp2 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0004 a0001c0002t0001 a0001c0002t0004	a0001c0002t0001g0126 a0001c0002t0004g0381 a0001c0002t0001g0126 a0001c0002t0004g0381	2	396	0.0051	11	c.809 others(26): Show c.809-431_809-430insATATATATATA	DCAF4	ENSG00000119599.17	transcript	ENST00000358377.7	protein_coding	9/13		INFO_REALIGN_3_PRIME	chr14	TogoVar
DCAF4_chr14_72921464_72964703	72953732	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0127 a0001c0002t0001g0127	1	396	0.0025	11	c.809 others(26): Show c.809-432_809-431insTATATATATAT	DCAF4	ENSG00000119599.17	transcript	ENST00000358377.7	protein_coding	9/13			chr14	TogoVar
DCAF6_chr1_167931683_168080836	167963577	A A	ATTACAGG others(4): Show ATTACAGGTGCC	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG01168.hp1 others(31): Show HG00099.hp2 HG00280.hp1 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01256.hp1 HG01261.hp1 HG01515.hp2 HG01884.hp2 HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02486.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp1 HG03041.hp1 HG03195.hp1 HG03710.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp2 NA19240.hp2 NA20300.hp2 NA21309.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0006c0008t0005 a0001c0001t0001 a0001c0001t0002 a0006c0008t0005	a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0002g0155 others(31): Show a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0006c0008t0005g0157	34	266	0.1278	11	c.160 others(28): Show c.160-3051_160-3050insTACAGGTGCCT	DCAF6	ENSG00000143164.16	transcript	ENST00000367840.4	protein_coding	2/21		INFO_REALIGN_3_PRIME	chr1	TogoVar
DCAF7_chr17_63545477_63599266	63551891	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0077 a0001c0001t0024g0077	1	262	0.0038	11	c.138 others(28): Show c.138+1106_138+1116dupAAAAAAAAAAA	DCAF7	ENSG00000136485.16	transcript	ENST00000614556.5	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
DCAF7_chr17_63545477_63599266	63588189	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG03195.hp1 HG03225.hp1 HG00639.hp1 HG03195.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0064 a0001c0001t0001g0013 a0001c0001t0001g0064	3	262	0.0115	11	c.857 others(26): Show c.857-805_857-795dupTTTTTTTTTTT	DCAF7	ENSG00000136485.16	transcript	ENST00000614556.5	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
DCAF8L2_chrX_27585344_27754942	27587985	A A	AAATATAT others(4): Show AAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0003 a0003	a0003c0033 a0003c0033	a0003c0033t0002 a0003c0033t0002	a0003c0033t0002g0103 a0003c0033t0002g0103	1	262	0.0038	11	c.-27 others(22): Show c.-2797_-2796insAATATATATAT	DCAF8L2	ENSG00000189186.11	transcript	ENST00000451261.7	protein_coding		2358		chrX	TogoVar
DCAF8L2_chrX_27585344_27754942	27606341	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0047 a0006c0006t0001g0047	1	262	0.0038	11	c.-34 others(32): Show c.-342+15901_-342+15902insATATATATATA	DCAF8L2	ENSG00000189186.11	transcript	ENST00000451261.7	protein_coding	1/4			chrX	TogoVar
DCAF8L2_chrX_27585344_27754942	27619004	A A	AATCTATC others(4): Show AATCTATCATCT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00741.hp1 HG00735.hp2 HG00741.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0002 a0004c0004t0001g0002	2	262	0.0076	11	c.-34 others(32): Show c.-341-12868_-341-12867insATCTATCTATC	DCAF8L2	ENSG00000189186.11	transcript	ENST00000451261.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
DCAF8_chr1_160210720_160267549	160211656	G G	GAGATCAC others(4): Show GAGATCACTACT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0079 a0001c0001t0001g0079	1	336	0.0030	11	c.59 others(22): Show c.5925_*5935dupAGTAGTGATCT	DCAF8	ENSG00000132716.19	transcript	ENST00000368074.6	protein_coding		4063		chr1	TogoVar
DCAKD_chr17_45018344_45056632	45020150	G G	GGCAGCCG others(4): Show GGCAGCCGGGTA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0224 a0001c0001t0024g0224	1	408	0.0025	11	c.42 others(22): Show c.4282_*4283insTACCCGGCTGC	DCAKD	ENSG00000172992.13	transcript	ENST00000651974.1	protein_coding		3193		chr17	TogoVar
DCBLD1_chr6_117477674_117554797	117499240	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02630.hp1 HG03130.hp1 others(3): Show HG02109.hp1 HG02630.hp1 HG03130.hp1 HG03195.hp1 HG03209.hp1 NA19030.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0007 a0003c0005t0002 a0001c0001t0001 a0001c0001t0007 a0003c0005t0002	a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0320 others(3): Show a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0007g0319 a0003c0005t0002g0313	6	370	0.0162	11	c.113 others(28): Show c.113-4520_113-4510dupAAAAAAAAAAA	DCBLD1	ENSG00000164465.19	transcript	ENST00000338728.10	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
DCBLD2_chr3_98790941_98906695	98870736	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0103 a0001c0002t0004g0103	1	330	0.0030	11	c.433 others(30): Show c.433+10803_433+10804insCTTTCTTTCTT	DCBLD2	ENSG00000057019.16	transcript	ENST00000326840.11	protein_coding	2/15			chr3	TogoVar
DCBLD2_chr3_98790941_98906695	98870737	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0003 a0001c0009t0003	a0001c0009t0003g0282 a0001c0009t0003g0282	1	330	0.0030	11	c.433 others(30): Show c.433+10802_433+10803insCTTTCTTTCTT	DCBLD2	ENSG00000057019.16	transcript	ENST00000326840.11	protein_coding	2/15			chr3	TogoVar
DCC_chr18_52335197_53540899	52398122	A A	ATTGGGGT others(4): Show ATTGGGGTAATG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp1 HG01106.hp2 others(8): Show HG00735.hp1 HG01069.hp1 HG01106.hp2 HG01257.hp2 HG01346.hp2 HG02257.hp2 HG02717.hp1 HG02970.hp2 HG03098.hp2 NA18966.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0008 others(2): Show a0001c0002 a0001c0003 a0001c0008 a0002c0001 a0002c0012	a0001c0002t0002 a0001c0002t0006 a0001c0002t0008 others(6): Show a0001c0002t0002 a0001c0002t0006 a0001c0002t0008 a0001c0003t0003 a0001c0008t0023 a0002c0001t0001 a0002c0001t0018 a0002c0001t0029 a0002c0012t0011	a0001c0002t0002g0038 a0001c0002t0006g0003 a0001c0002t0006g0009 others(8): Show a0001c0002t0002g0038 a0001c0002t0006g0003 a0001c0002t0006g0009 a0001c0002t0008g0039 a0001c0003t0003g0041 a0001c0003t0003g0097 a0001c0008t0023g0098 a0002c0001t0001g0036 a0002c0001t0018g0034 a0002c0001t0029g0040 a0002c0012t0011g0037	11	114	0.0965	11	c.91+ others(28): Show c.91+57244_91+57245insTTGGGGTAATG	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	1/28			chr18	TogoVar
DCC_chr18_52335197_53540899	52474243	A A	AGAGAGAG others(4): Show AGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0005 a0001c0002t0002g0005	1	114	0.0088	11	c.91+ others(30): Show c.91+133365_91+133366insGAGAGAGAGAG	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	1/28			chr18	TogoVar
DCC_chr18_52335197_53540899	52515606	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02280.hp1 NA19057.hp1 HG00673.hp2 HG02280.hp1 NA19057.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0005 a0001c0003t0004 a0002c0001t0015 a0001c0002t0005 a0001c0003t0004 a0002c0001t0015	a0001c0002t0005g0028 a0001c0003t0004g0057 a0002c0001t0015g0069 a0001c0002t0005g0028 a0001c0003t0004g0057 a0002c0001t0015g0069	3	114	0.0263	11	c.91+ others(30): Show c.91+174738_91+174748dupAAAAAAAAAAA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	52610178	A A	AAAAATAT others(4): Show AAAAATATATAT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0002 a0002	a0002c0020 a0002c0020	a0002c0020t0007 a0002c0020t0007	a0002c0020t0007g0113 a0002c0020t0007g0113	1	114	0.0088	11	c.92- others(30): Show c.92-141875_92-141874insAAATATATATA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	1/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	52783323	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02970.hp1 HG03471.hp2 others(2): Show HG01261.hp1 HG02970.hp1 HG03471.hp2 NA18971.hp1 NA19065.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0001 a0001c0002 a0001c0003 a0002c0001	a0001c0002t0002 a0001c0003t0013 a0001c0003t0020 others(2): Show a0001c0002t0002 a0001c0003t0013 a0001c0003t0020 a0002c0001t0001 a0002c0001t0002	a0001c0002t0002g0005 a0001c0003t0013g0075 a0001c0003t0020g0102 others(2): Show a0001c0002t0002g0005 a0001c0003t0013g0075 a0001c0003t0020g0102 a0002c0001t0001g0056 a0002c0001t0002g0027	5	114	0.0439	11	c.412 others(30): Show c.412+30977_412+30987dupTTTTTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	52856625	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02622.hp1 HG04199.hp2 others(2): Show HG01433.hp2 HG02622.hp1 HG04199.hp2 NA18971.hp1 NA19057.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0023 a0001c0002 a0001c0003 a0001c0023	a0001c0002t0005 a0001c0003t0001 a0001c0003t0004 others(2): Show a0001c0002t0005 a0001c0003t0001 a0001c0003t0004 a0001c0003t0020 a0001c0023t0001	a0001c0002t0005g0028 a0001c0003t0001g0058 a0001c0003t0004g0092 others(2): Show a0001c0002t0005g0028 a0001c0003t0001g0058 a0001c0003t0004g0092 a0001c0003t0020g0102 a0001c0023t0001g0106	5	114	0.0439	11	c.413 others(30): Show c.413-49411_413-49401dupAAAAAAAAAAA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	52879412	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01993.hp1 HG02622.hp2 others(3): Show HG01346.hp1 HG01993.hp1 HG02622.hp2 HG02922.hp1 HG03669.hp2 NA20129.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0003 a0002c0001 a0002c0004 others(1): Show a0001c0003 a0002c0001 a0002c0004 a0008c0016	a0001c0003t0012 a0001c0003t0032 a0002c0001t0002 others(3): Show a0001c0003t0012 a0001c0003t0032 a0002c0001t0002 a0002c0001t0006 a0002c0004t0014 a0008c0016t0021	a0001c0003t0012g0100 a0001c0003t0032g0109 a0002c0001t0002g0017 others(3): Show a0001c0003t0012g0100 a0001c0003t0032g0109 a0002c0001t0002g0017 a0002c0001t0006g0010 a0002c0004t0014g0043 a0008c0016t0021g0033	6	114	0.0526	11	c.413 others(30): Show c.413-26613_413-26603dupTTTTTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	2/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53090698	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00733.hp2 HG00735.hp1 others(3): Show HG00673.hp1 HG00733.hp2 HG00735.hp1 HG01261.hp1 HG02976.hp1 HG03209.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0003 a0002c0001 a0006c0019 a0001c0003 a0002c0001 a0006c0019	a0001c0003t0003 a0001c0003t0008 a0002c0001t0001 others(2): Show a0001c0003t0003 a0001c0003t0008 a0002c0001t0001 a0002c0001t0002 a0006c0019t0005	a0001c0003t0003g0097 a0001c0003t0008g0048 a0002c0001t0001g0056 others(3): Show a0001c0003t0003g0097 a0001c0003t0008g0048 a0002c0001t0001g0056 a0002c0001t0001g0080 a0002c0001t0002g0081 a0006c0019t0005g0014	6	114	0.0526	11	c.126 others(32): Show c.1261+24558_1261+24568dupAAAAAAAAAAA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	7/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53099939	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0011 a0001c0005t0011	a0001c0005t0011g0045 a0001c0005t0011g0045	1	114	0.0088	11	c.126 others(32): Show c.1261+33776_1261+33777insTTTTTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	7/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53226948	A A	ATATATTT others(4): Show ATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0011 a0001c0005t0011	a0001c0005t0011g0032 a0001c0005t0011g0032	1	114	0.0088	11	c.191 others(32): Show c.1911+11352_1911+11353insATATTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	12/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53312976	A A	AAGGGAGG others(4): Show AAGGGAGGAGGG	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02976.hp1 HG02647.hp2 HG02976.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0008	a0001c0003t0008g0011 a0001c0003t0008g0048 a0001c0003t0008g0011 a0001c0003t0008g0048	2	114	0.0175	11	c.205 others(30): Show c.2053+7272_2053+7282dupGAGGAGGGAGG	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	13/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53382104	A A	ACACACAC others(4): Show ACACACACACAC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0002 a0002	a0002c0020 a0002c0020	a0002c0020t0007 a0002c0020t0007	a0002c0020t0007g0113 a0002c0020t0007g0113	1	114	0.0088	11	c.236 others(30): Show c.2360-3938_2360-3937insACACACACACC	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	15/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53428508	T T	TATATAAA others(4): Show TATATAAATATA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02922.hp1 HG03669.hp2 others(2): Show HG01069.hp1 HG02922.hp1 HG03669.hp2 HG04228.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0004 a0001c0003 a0002c0004	a0001c0003t0003 a0001c0003t0012 a0001c0003t0032 others(1): Show a0001c0003t0003 a0001c0003t0012 a0001c0003t0032 a0002c0004t0014	a0001c0003t0003g0041 a0001c0003t0012g0082 a0001c0003t0012g0100 others(2): Show a0001c0003t0003g0041 a0001c0003t0012g0082 a0001c0003t0012g0100 a0001c0003t0032g0109 a0002c0004t0014g0043	5	114	0.0439	11	c.316 others(30): Show c.3164-6636_3164-6635insATATAAATATA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	21/28			chr18	TogoVar
DCC_chr18_52335197_53540899	53429054	T T	TATTTTAT others(4): Show TATTTTATATAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00733.hp2 HG01993.hp1 others(9): Show HG00673.hp1 HG00733.hp2 HG01993.hp1 HG02080.hp1 HG04199.hp1 HG04228.hp1 NA18948.hp2 NA18966.hp1 NA18971.hp2 NA18979.hp1 NA19065.hp1 NA20752.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0002c0001 a0004c0009 a0001c0002 a0002c0001 a0004c0009	a0001c0002t0014 a0002c0001t0001 a0002c0001t0002 others(2): Show a0001c0002t0014 a0002c0001t0001 a0002c0001t0002 a0002c0001t0029 a0004c0009t0002	a0001c0002t0014g0051 a0002c0001t0001g0053 a0002c0001t0001g0080 others(9): Show a0001c0002t0014g0051 a0002c0001t0001g0053 a0002c0001t0001g0080 a0002c0001t0002g0017 a0002c0001t0002g0018 a0002c0001t0002g0019 a0002c0001t0002g0027 a0002c0001t0002g0055 a0002c0001t0002g0081 a0002c0001t0002g0089 a0002c0001t0029g0040 a0004c0009t0002g0016	12	114	0.1053	11	c.316 others(30): Show c.3164-6090_3164-6089insATTTTATATAA	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	21/28			chr18	TogoVar
DCC_chr18_52335197_53540899	53439769	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp2 NA18971.hp1 HG01192.hp2 NA18971.hp1	a0001 a0002 a0001 a0002	a0001c0003 a0002c0018 a0001c0003 a0002c0018	a0001c0003t0020 a0002c0018t0004 a0001c0003t0020 a0002c0018t0004	a0001c0003t0020g0102 a0002c0018t0004g0071 a0001c0003t0020g0102 a0002c0018t0004g0071	2	114	0.0175	11	c.322 others(30): Show c.3229+4563_3229+4573dupTTTTTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	22/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53446124	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01433.hp2 NA18971.hp1 HG00735.hp1 HG01433.hp2 NA18971.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0004 a0001c0003t0020 a0001c0003t0003 a0001c0003t0004 a0001c0003t0020	a0001c0003t0003g0097 a0001c0003t0004g0092 a0001c0003t0020g0102 a0001c0003t0003g0097 a0001c0003t0004g0092 a0001c0003t0020g0102	3	114	0.0263	11	c.323 others(30): Show c.3230-4376_3230-4375insAAAAAAAAAAC	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	22/28			chr18	TogoVar
DCC_chr18_52335197_53540899	53448047	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0007 a0007	a0007c0014 a0007c0014	a0007c0014t0037 a0007c0014t0037	a0007c0014t0037g0030 a0007c0014t0037g0030	1	114	0.0088	11	c.323 others(30): Show c.3230-2440_3230-2430dupTTTTTTTTTTT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	22/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCC_chr18_52335197_53540899	53468363	T T	TTTATTTA others(4): Show TTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02622.hp2 HG03139.hp2 others(1): Show HG02257.hp1 HG02622.hp2 HG03139.hp2 HG03579.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0002c0001 a0005c0021 a0001c0002 a0002c0001 a0005c0021	a0001c0002t0006 a0002c0001t0006 a0005c0021t0031 a0001c0002t0006 a0002c0001t0006 a0005c0021t0031	a0001c0002t0006g0006 a0001c0002t0006g0021 a0002c0001t0006g0010 others(1): Show a0001c0002t0006g0006 a0001c0002t0006g0021 a0002c0001t0006g0010 a0005c0021t0031g0004	4	114	0.0351	11	c.373 others(28): Show c.3736+355_3736+356insATTTATTTATT	DCC	ENSG00000187323.13	transcript	ENST00000442544.7	protein_coding	25/28		INFO_REALIGN_3_PRIME	chr18	TogoVar
DCDC1_chr11_30858603_31374739	30884033	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02280.hp2 HG02559.hp2 others(7): Show HG02258.hp1 HG02280.hp2 HG02559.hp2 HG02572.hp2 HG02630.hp2 HG02897.hp2 HG03225.hp2 HG03453.hp2 NA19043.hp2 NA19240.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0009 a0010	a0001c0001 a0001c0006 a0002c0003 others(4): Show a0001c0001 a0001c0006 a0002c0003 a0003c0004 a0005c0005 a0009c0020 a0010c0016	a0001c0001t0002 a0001c0006t0010 a0002c0003t0002 others(5): Show a0001c0001t0002 a0001c0006t0010 a0002c0003t0002 a0003c0004t0002 a0003c0004t0004 a0005c0005t0003 a0009c0020t0002 a0010c0016t0003	a0001c0001t0002g0019 a0001c0001t0002g0035 a0001c0006t0010g0124 others(7): Show a0001c0001t0002g0019 a0001c0001t0002g0035 a0001c0006t0010g0124 a0002c0003t0002g0097 a0003c0004t0002g0151 a0003c0004t0004g0131 a0003c0004t0004g0142 a0005c0005t0003g0127 a0009c0020t0002g0025 a0010c0016t0003g0128	10	152	0.0658	11	c.508 others(30): Show c.5083-2736_5083-2726dupAAAAAAAAAAA	DCDC1	ENSG00000170959.15	transcript	ENST00000684477.1	protein_coding	36/38			chr11	TogoVar
DCDC1_chr11_30858603_31374739	31294798	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0141 a0003c0004t0002g0141	1	152	0.0066	11	c.755 others(28): Show c.755-3947_755-3946insCTTTCTTTCTT	DCDC1	ENSG00000170959.15	transcript	ENST00000684477.1	protein_coding	6/38			chr11	TogoVar
DCDC2C_chr2_3698575_3853008	3703576	G G	GCCCCGTC others(4): Show GCCCCGTCCAGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01123.hp2 HG02145.hp1 HG02257.hp1 others(14): Show HG01123.hp2 HG02145.hp1 HG02257.hp1 HG02258.hp1 HG02451.hp1 HG02559.hp2 HG02723.hp1 HG02723.hp2 HG03130.hp1 HG03225.hp1 HG03453.hp2 HG03516.hp2 HG06807.hp2 NA18522.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0001c0005 a0002c0003 others(3): Show a0001c0002 a0001c0005 a0002c0003 a0002c0004 a0005c0010 a0005c0014	a0001c0002t0008 a0001c0002t0020 a0001c0005t0008 others(6): Show a0001c0002t0008 a0001c0002t0020 a0001c0005t0008 a0002c0003t0011 a0002c0003t0017 a0002c0004t0018 a0005c0010t0013 a0005c0010t0019 a0005c0014t0013	a0001c0002t0008g0170 a0001c0002t0008g0173 a0001c0002t0008g0174 others(14): Show a0001c0002t0008g0170 a0001c0002t0008g0173 a0001c0002t0008g0174 a0001c0002t0008g0175 a0001c0002t0008g0176 a0001c0002t0020g0169 a0001c0005t0008g0171 a0001c0005t0008g0172 a0001c0005t0008g0177 a0002c0003t0011g0234 a0002c0003t0011g0235 a0002c0003t0011g0236 a0002c0003t0017g0237 a0002c0004t0018g0233 a0005c0010t0013g0243 a0005c0010t0019g0242 a0005c0014t0013g0241	17	324	0.0525	11	c.-16 others(20): Show c.-168_-167insAGCCCCCGTCC	DCDC2C	ENSG00000214866.9	transcript	ENST00000399143.9	protein_coding	1/11	167	INFO_REALIGN_3_PRIME	chr2	TogoVar
DCDC2C_chr2_3698575_3853008	3762162	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 NA18522.hp2 NA19000.hp2 HG02145.hp1 NA18522.hp2 NA19000.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0002 a0002c0003 a0005c0010 a0001c0002 a0002c0003 a0005c0010	a0001c0002t0001 a0002c0003t0001 a0005c0010t0013 a0001c0002t0001 a0002c0003t0001 a0005c0010t0013	a0001c0002t0001g0140 a0002c0003t0001g0218 a0005c0010t0013g0243 a0001c0002t0001g0140 a0002c0003t0001g0218 a0005c0010t0013g0243	3	324	0.0093	11	c.727 others(28): Show c.727-5587_727-5577dupTTTTTTTTTTT	DCDC2C	ENSG00000214866.9	transcript	ENST00000399143.9	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr2	TogoVar
DCDC2C_chr2_3698575_3853008	3813068	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01071.hp1 HG03195.hp1 others(4): Show HG00738.hp2 HG01071.hp1 HG03195.hp1 NA18612.hp2 NA18948.hp1 NA18954.hp2 NA19004.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0003 a0003c0009 a0001c0002 a0002c0003 a0003c0009	a0001c0002t0001 a0001c0002t0003 a0002c0003t0001 others(2): Show a0001c0002t0001 a0001c0002t0003 a0002c0003t0001 a0003c0009t0004 a0003c0009t0009	a0001c0002t0001g0123 a0001c0002t0001g0137 a0001c0002t0003g0107 others(4): Show a0001c0002t0001g0123 a0001c0002t0001g0137 a0001c0002t0003g0107 a0001c0002t0003g0132 a0002c0003t0001g0219 a0003c0009t0004g0295 a0003c0009t0009g0270	7	324	0.0216	11	c.106 others(32): Show c.1065+27968_1065+27969insATATATATATA	DCDC2C	ENSG00000214866.9	transcript	ENST00000399143.9	protein_coding	10/10			chr2	TogoVar
DCDC2_chr6_24166755_24363059	24182629	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 NA18968.hp2 others(1): Show HG00558.hp1 HG00558.hp2 NA18968.hp2 NA19086.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0011 a0001c0001 a0002c0002 a0002c0011	a0001c0001t0024 a0001c0001t0026 a0002c0002t0009 others(1): Show a0001c0001t0024 a0001c0001t0026 a0002c0002t0009 a0002c0011t0006	a0001c0001t0024g0199 a0001c0001t0026g0193 a0002c0002t0009g0127 others(1): Show a0001c0001t0024g0199 a0001c0001t0026g0193 a0002c0002t0009g0127 a0002c0011t0006g0124	4	216	0.0185	11	c.102 others(30): Show c.1024-4008_1024-3998dupTTTTTTTTTTT	DCDC2	ENSG00000146038.12	transcript	ENST00000378454.8	protein_coding	8/9			chr6	TogoVar
DCDC2_chr6_24166755_24363059	24238154	A A	AAGGAAAG others(4): Show AAGGAAAGGAGG	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0022 a0002c0002t0022	a0002c0002t0022g0098 a0002c0002t0022g0098	1	216	0.0046	11	c.923 others(30): Show c.923-33053_923-33052insCCTCCTTTCCT	DCDC2	ENSG00000146038.12	transcript	ENST00000378454.8	protein_coding	7/9			chr6	TogoVar
DCDC2_chr6_24166755_24363059	24271207	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01175.hp2 HG00735.hp2 HG01175.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0018 a0001c0001t0001 a0002c0002t0018	a0001c0001t0001g0049 a0002c0002t0018g0012 a0001c0001t0001g0049 a0002c0002t0018g0012	2	216	0.0093	11	c.922 others(28): Show c.922+6831_922+6841dupTTTTTTTTTTT	DCDC2	ENSG00000146038.12	transcript	ENST00000378454.8	protein_coding	7/9			chr6	TogoVar
DCHS2_chr4_154226742_154496799	154247635	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0105 a0105	a0105c0125 a0105c0125	a0105c0125t0031 a0105c0125t0031	a0105c0125t0031g0183 a0105c0125t0031g0183	1	192	0.0052	11	c.694 others(30): Show c.6942-4874_6942-4864dupTTTTTTTTTTT	DCHS2	ENSG00000197410.14	transcript	ENST00000357232.10	protein_coding	16/19			chr4	TogoVar

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