Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ADORA1_chr1_203122726_203172405	203144111	C C	CACACACA others(4): Show CACACACACACA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0244 a0001c0001t0001g0244	1	408	0.0025	11	c.341 others(30): Show c.341+14930_341+14940dupACACACACACA	ADORA1	ENSG00000163485.18	transcript	ENST00000337894.9	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr1	TogoVar
ADORA2B_chr17_15940130_15980746	15976067	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03490.hp1 NA19055.hp2 HG03490.hp1 NA19055.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0008 a0001c0001 a0005c0008	a0001c0001t0001 a0005c0008t0001 a0001c0001t0001 a0005c0008t0001	a0001c0001t0001g0266 a0005c0008t0001g0001 a0001c0001t0001g0266 a0005c0008t0001g0001	2	346	0.0058	11	c.72 others(20): Show c.725_*726insAAAAAAAAAAA	ADORA2B	ENSG00000170425.4	transcript	ENST00000304222.3	protein_coding		322		chr17	TogoVar
ADORA2B_chr17_15940130_15980746	15976098	A A	AAAAAAAA others(4): Show AAAAAAAAATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	346	0.0029	11	c.75 others(20): Show c.756_*757insAAAAAAAATAT	ADORA2B	ENSG00000170425.4	transcript	ENST00000304222.3	protein_coding		353		chr17	TogoVar
ADORA2B_chr17_15940130_15980746	15976098	A A	AAATATAT others(4): Show AAATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0237	1	346	0.0029	11	c.75 others(20): Show c.756_*757insAATATATATAT	ADORA2B	ENSG00000170425.4	transcript	ENST00000304222.3	protein_coding		353		chr17	TogoVar
ADPRHL1_chr13_113394611_113458488	113415750	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG03225.hp2 HG03490.hp2 HG01106.hp1 HG03225.hp2 HG03490.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0005 a0002c0002 a0004c0005	a0002c0002t0002 a0002c0002t0003 a0004c0005t0099 a0002c0002t0002 a0002c0002t0003 a0004c0005t0099	a0002c0002t0002g0189 a0002c0002t0003g0238 a0004c0005t0099g0085 a0002c0002t0002g0189 a0002c0002t0003g0238 a0004c0005t0099g0085	3	262	0.0115	11	c.106 others(30): Show c.1061+7065_1061+7075dupTTTTTTTTTTT	ADPRHL1	ENSG00000153531.15	transcript	ENST00000612156.3	protein_coding	7/7			chr13	TogoVar
ADPRM_chr17_10692594_10716558	10708429	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02056.hp1 NA19043.hp2 HG02056.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0049 a0001c0001t0001g0050	2	402	0.0050	11	c.718 others(28): Show c.718+1886_718+1896dupAAAAAAAAAAA	ADPRM	ENSG00000170222.12	transcript	ENST00000379774.5	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr17	TogoVar
ADPRM_chr17_10692594_10716558	10708450	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0071 a0002c0002t0003g0071	1	402	0.0025	11	c.718 others(28): Show c.718+1896_718+1897insAAAAAAAAAAC	ADPRM	ENSG00000170222.12	transcript	ENST00000379774.5	protein_coding	3/3			chr17	TogoVar
ADRA1B_chr5_159911482_159978012	159962669	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	384	0.0026	11	c.950 others(28): Show c.950-9201_950-9191dupTTTTTTTTTTT	ADRA1B	ENSG00000170214.5	transcript	ENST00000306675.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr5	TogoVar
ADRA1D_chr20_4215630_4254287	4231085	T T	TCTTTCTC others(4): Show TCTTTCTCTCTC	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03098.hp2 HG02486.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0001 a0001c0001t0009	a0001c0001t0001g0141 a0001c0001t0009g0139 a0001c0001t0001g0141 a0001c0001t0009g0139	2	452	0.0044	11	c.111 others(30): Show c.1112-8956_1112-8955insGAGAGAGAAAG	ADRA1D	ENSG00000171873.8	transcript	ENST00000379453.6	protein_coding	1/1			chr20	TogoVar
ADRA1D_chr20_4215630_4254287	4236883	T T	TCTCCCCC others(4): Show TCTCCCCCCCCC	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	452	0.0022	11	c.111 others(32): Show c.1111+10963_1111+10964insGGGGGGGGGAG	ADRA1D	ENSG00000171873.8	transcript	ENST00000379453.6	protein_coding	1/1			chr20	TogoVar
ADRA2A_chr10_111072029_111085907	111075598	T T	TTCTCTCT others(4): Show TTCTCTCTTCTA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp2 NA19076.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0000 a0001c0001t0005g0000	1	432	0.0023	11	c.-23 others(22): Show c.-2399_-2398insTCTCTCTTCTA	ADRA2A	ENSG00000150594.7	transcript	ENST00000280155.4	protein_coding		1430		chr10	TogoVar
ADRB1_chr10_114038866_114051904	114039490	C C	CTTTTCTT others(4): Show CTTTTCTTTTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0000 a0002c0002t0013g0000	1	394	0.0025	11	c.-46 others(22): Show c.-4643_-4642insTTTTCTTTTCT	ADRB1	ENSG00000043591.6	transcript	ENST00000369295.4	protein_coding		4375		chr10	TogoVar
ADRB1_chr10_114038866_114051904	114042503	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0000 a0003c0003t0005g0000	1	394	0.0025	11	c.-16 others(22): Show c.-1630_-1629insAAAAAAAAAAA	ADRB1	ENSG00000043591.6	transcript	ENST00000369295.4	protein_coding		1362		chr10	TogoVar
ADSS1_chr14_104719229_104752310	104736881	G G	GATTATAT others(4): Show GATTATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0201 a0001c0001t0001g0201	1	402	0.0025	11	c.296 others(28): Show c.296-1493_296-1492insTATATATATAT	ADSS1	ENSG00000185100.12	transcript	ENST00000330877.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr14	TogoVar
ADSS2_chr1_244403494_244456909	244435194	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0069 a0001c0001t0002g0069	1	408	0.0025	11	c.355 others(28): Show c.355+1630_355+1631insGTTTTTTTTTT	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	3/12			chr1	TogoVar
ADSS2_chr1_244403494_244456909	244444514	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01099.hp2 HG02258.hp2 HG00741.hp1 HG01099.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0195 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0195 a0001c0001t0001g0253 a0001c0001t0001g0254	3	408	0.0074	11	c.184 others(28): Show c.184-6757_184-6747dupTTTTTTTTTTT	ADSS2	ENSG00000035687.10	transcript	ENST00000366535.4	protein_coding	1/12			chr1	TogoVar
ADTRP_chr6_11708523_11783803	11779949	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG01070.hp2 HG01074.hp1 others(10): Show HG00323.hp2 HG01070.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp2 HG01167.hp1 HG01884.hp1 HG02451.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03017.hp1 NA19075.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0002c0002t0003	a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0061 others(9): Show a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0061 a0001c0001t0001g0177 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0079 a0001c0001t0002g0091 a0001c0001t0002g0136 a0001c0001t0006g0002 a0002c0002t0003g0071	13	410	0.0317	11	c.-12 others(22): Show c.-1201_-1191dupAAAAAAAAAAA	ADTRP	ENSG00000111863.13	transcript	ENST00000414691.8	protein_coding		1147		chr6	TogoVar
AEBP2_chr12_19434492_19527227	19495547	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0046 a0001c0001t0034g0046	1	404	0.0025	11	c.117 others(30): Show c.1174+1565_1174+1575dupTTTTTTTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AEBP2_chr12_19434492_19527227	19510865	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01071.hp2 HG01167.hp1 others(10): Show HG00735.hp1 HG01071.hp2 HG01167.hp1 HG01433.hp1 HG01928.hp1 HG01943.hp2 HG01952.hp1 HG02004.hp1 HG02071.hp1 HG02148.hp2 NA18947.hp2 NA19030.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0043 a0001c0001t0005 a0001c0002t0043	a0001c0001t0005g0132 a0001c0001t0005g0134 a0001c0001t0005g0135 others(10): Show a0001c0001t0005g0132 a0001c0001t0005g0134 a0001c0001t0005g0135 a0001c0001t0005g0136 a0001c0001t0005g0140 a0001c0001t0005g0142 a0001c0001t0005g0143 a0001c0001t0005g0145 a0001c0001t0005g0147 a0001c0001t0005g0149 a0001c0001t0005g0151 a0001c0001t0005g0152 a0001c0002t0043g0064	13	404	0.0322	11	c.130 others(30): Show c.1300-1526_1300-1516dupTTTTTTTTTTT	AEBP2	ENSG00000139154.16	transcript	ENST00000266508.14	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr12	TogoVar
AFAP1L1_chr5_149266859_149348637	149307857	T T	TCTCTCTC others(4): Show TCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0175 a0001c0001t0006g0175	1	286	0.0035	11	c.747 others(26): Show c.747+244_747+245insCTCTCTCTCTC	AFAP1L1	ENSG00000157510.14	transcript	ENST00000296721.9	protein_coding	7/18			chr5	TogoVar
AFAP1L2_chr10_114289824_114409502	114352479	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0008 a0001c0004t0008	a0001c0004t0008g0056 a0001c0004t0008g0056	1	262	0.0038	11	c.17- others(28): Show c.17-11759_17-11749dupTTTTTTTTTTT	AFAP1L2	ENSG00000169129.16	transcript	ENST00000304129.9	protein_coding	1/18			chr10	TogoVar
AFAP1_chr4_7753714_7944861	7791143	C C	CCAACATC others(4): Show CCAACATCCACA	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0099 a0001c0002t0003g0099	1	318	0.0031	11	c.141 others(30): Show c.1412+2537_1412+2538insTGTGGATGTTG	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	11/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7801914	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp2 HG01168.hp2 others(10): Show HG00423.hp2 HG00621.hp2 HG01168.hp2 HG01257.hp2 HG01258.hp1 HG01433.hp2 HG02132.hp1 HG02300.hp1 HG04199.hp2 NA18747.hp2 NA18967.hp1 NA19005.hp2 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0011 others(1): Show a0001c0001 a0001c0010 a0001c0011 a0001c0014	a0001c0001t0001 a0001c0001t0010 a0001c0001t0014 others(4): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0014 a0001c0001t0015 a0001c0010t0044 a0001c0011t0016 a0001c0014t0015	a0001c0001t0001g0038 a0001c0001t0001g0081 a0001c0001t0001g0086 others(10): Show a0001c0001t0001g0038 a0001c0001t0001g0081 a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0010g0059 a0001c0001t0010g0062 a0001c0001t0014g0053 a0001c0001t0014g0056 a0001c0001t0015g0116 a0001c0001t0015g0117 a0001c0010t0044g0068 a0001c0011t0016g0064 a0001c0014t0015g0163	13	318	0.0409	11	c.105 others(30): Show c.1055-1272_1055-1262dupTTTTTTTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	9/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7827569	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG03710.hp1 HG02015.hp1 HG03710.hp1	a0001 a0001	a0001c0004 a0001c0007 a0001c0004 a0001c0007	a0001c0004t0006 a0001c0007t0036 a0001c0004t0006 a0001c0007t0036	a0001c0004t0006g0240 a0001c0007t0036g0005 a0001c0004t0006g0240 a0001c0007t0036g0005	2	318	0.0063	11	c.727 others(28): Show c.727-8409_727-8399dupTTTTTTTTTTT	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	6/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7867072	A A	AGAGAGGG others(4): Show AGAGAGGGAGGG	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0108 a0001c0002t0003g0108	1	318	0.0031	11	c.225 others(28): Show c.225+1549_225+1550insCCCTCCCTCTC	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	3/17			chr4	TogoVar
AFDN_chr6_167821911_167977023	167826862	G G	GGCGGGCG others(4): Show GGCGGGCGGGGC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01109.hp1 NA19066.hp2 HG00639.hp2 HG01109.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0001 a0001c0001t0002 a0001c0005t0001	a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0005t0001g0041 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0005t0001g0041	3	326	0.0092	11	c.-27 others(20): Show c.-271_-270insGCGGGCGGGGC	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding		48		chr6	TogoVar
AFF1_chr4_86930011_87146039	86963963	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02135.hp2 NA18988.hp2 others(2): Show HG01167.hp1 HG02135.hp2 NA18988.hp2 NA18992.hp1 NA18999.hp2	a0001 a0013 a0001 a0013	a0001c0001 a0013c0020 a0001c0001 a0013c0020	a0001c0001t0009 a0001c0001t0029 a0001c0001t0030 others(1): Show a0001c0001t0009 a0001c0001t0029 a0001c0001t0030 a0013c0020t0061	a0001c0001t0009g0232 a0001c0001t0009g0233 a0001c0001t0029g0229 others(2): Show a0001c0001t0009g0232 a0001c0001t0009g0233 a0001c0001t0029g0229 a0001c0001t0030g0234 a0013c0020t0061g0171	5	294	0.0170	11	c.38+ others(28): Show c.38+15403_38+15413dupTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86978177	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02723.hp2 HG03516.hp2 HG02572.hp1 HG02723.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0015 a0001c0002t0005 a0001c0005t0052 a0001c0001t0015 a0001c0002t0005 a0001c0005t0052	a0001c0001t0015g0114 a0001c0002t0005g0117 a0001c0005t0052g0172 a0001c0001t0015g0114 a0001c0002t0005g0117 a0001c0005t0052g0172	3	294	0.0102	11	c.38+ others(28): Show c.38+29620_38+29630dupTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86982848	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG03225.hp2 HG02965.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0016 a0001c0001t0011 a0001c0001t0016	a0001c0001t0011g0265 a0001c0001t0016g0099 a0001c0001t0011g0265 a0001c0001t0016g0099	2	294	0.0068	11	c.38+ others(28): Show c.38+34294_38+34304dupAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86985166	A A	AATATGTA others(4): Show AATATGTATTAC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01243.hp2 HG01978.hp1 others(11): Show HG00738.hp2 HG01243.hp2 HG01978.hp1 HG02015.hp1 HG02080.hp2 HG02896.hp1 HG02897.hp2 HG02965.hp1 NA18612.hp2 NA18747.hp2 NA18944.hp2 NA18970.hp2 NA18977.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0017 a0001c0001t0035 a0001c0001t0047	a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0146 others(11): Show a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0146 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0164 a0001c0001t0003g0079 a0001c0001t0007g0145 a0001c0001t0011g0265 a0001c0001t0017g0096 a0001c0001t0017g0101 a0001c0001t0035g0264 a0001c0001t0047g0148	14	294	0.0476	11	c.38+ others(28): Show c.38+36595_38+36596insATATGTATTAC	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20			chr4	TogoVar
AFF1_chr4_86930011_87146039	86985170	A A	ATTACTAT others(4): Show ATTACTATATAT	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01517.hp1 HG01516.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0165 a0001c0001t0001g0120 a0001c0001t0001g0165	2	294	0.0068	11	c.38+ others(28): Show c.38+36599_38+36600insTTACTATATAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20			chr4	TogoVar
AFF1_chr4_86930011_87146039	87013032	C C	CTTTTTTT others(4): Show CTTTTTTTTTGT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp2 HG02818.hp1 others(4): Show HG01109.hp2 HG01891.hp2 HG02818.hp1 HG03041.hp2 HG03209.hp1 HG03579.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0005 a0001c0002t0044 others(1): Show a0001c0001t0003 a0001c0002t0005 a0001c0002t0044 a0001c0002t0056	a0001c0001t0003g0192 a0001c0002t0005g0185 a0001c0002t0005g0193 others(4): Show a0001c0001t0003g0192 a0001c0002t0005g0185 a0001c0002t0005g0193 a0001c0002t0005g0194 a0001c0002t0005g0249 a0001c0002t0044g0195 a0001c0002t0056g0200	7	294	0.0238	11	c.39- others(28): Show c.39-33125_39-33124insGTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022564	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0292 a0001c0001t0001g0292	1	294	0.0034	11	c.39- others(28): Show c.39-23601_39-23591dupTATATATATAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87063228	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01884.hp2 HG02071.hp2 others(7): Show HG00738.hp2 HG01884.hp2 HG02071.hp2 HG02622.hp1 HG03098.hp1 HG03239.hp1 HG03669.hp2 NA18961.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0015 a0016 a0001 a0015 a0016	a0001c0001 a0001c0003 a0015c0022 others(1): Show a0001c0001 a0001c0003 a0015c0022 a0016c0023	a0001c0001t0001 a0001c0001t0008 a0001c0003t0003 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0003t0003 a0001c0003t0066 a0015c0022t0006 a0016c0023t0015	a0001c0001t0001g0141 a0001c0001t0001g0147 a0001c0001t0001g0152 others(7): Show a0001c0001t0001g0141 a0001c0001t0001g0147 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0008g0112 a0001c0003t0003g0108 a0001c0003t0066g0207 a0015c0022t0006g0087 a0016c0023t0015g0113	10	294	0.0340	11	c.105 others(32): Show c.1059+15652_1059+15662dupTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87115609	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02040.hp1 HG02109.hp2 others(11): Show HG01884.hp1 HG02040.hp1 HG02109.hp2 HG02523.hp2 HG02559.hp2 HG02970.hp2 HG03041.hp1 HG03486.hp1 HG03516.hp2 HG04184.hp1 NA18968.hp1 NA18977.hp2 NA18994.hp2 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 others(5): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0015 a0001c0001t0016 a0001c0003t0007 a0001c0003t0027 a0001c0004t0023	a0001c0001t0003g0006 a0001c0001t0003g0289 a0001c0001t0004g0035 others(11): Show a0001c0001t0003g0006 a0001c0001t0003g0289 a0001c0001t0004g0035 a0001c0001t0004g0159 a0001c0001t0004g0209 a0001c0001t0004g0222 a0001c0001t0004g0238 a0001c0001t0008g0115 a0001c0001t0015g0114 a0001c0001t0016g0100 a0001c0003t0007g0235 a0001c0003t0027g0186 a0001c0003t0027g0188 a0001c0004t0023g0250	14	294	0.0476	11	c.246 others(28): Show c.2466+316_2466+326dupTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87115625	T T	TTTTTTTT others(4): Show TTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0064 a0001c0001t0003g0064	1	294	0.0034	11	c.246 others(28): Show c.2466+326_2466+327insTTTTTTTTTTC	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20			chr4	TogoVar
AFF2_chrX_148495617_149005663	148614738	T T	TTTCTTTC others(4): Show TTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0012 a0001c0001t0042g0012	1	169	0.0059	11	c.48- others(28): Show c.48-37259_48-37258insCTTTCTTTCTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614739	T T	TTCTTTCT others(4): Show TTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0154 a0001c0001t0016g0154	1	169	0.0059	11	c.48- others(28): Show c.48-37259_48-37258insCTTTCTTTCCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148795832	A A	AAATATAT others(4): Show AAATATATATAT	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0142 a0001c0001t0009g0142	1	169	0.0059	11	c.104 others(32): Show c.1042-14043_1042-14042insATATATATATA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148795832	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0026 a0001c0003t0026	a0001c0003t0026g0157 a0001c0003t0026g0157	1	169	0.0059	11	c.104 others(32): Show c.1042-14044_1042-14043insTATATATATAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148985285	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00639.hp2 HG01255.hp1 others(13): Show HG00609.hp1 HG00639.hp2 HG01255.hp1 HG01358.hp1 HG01978.hp2 HG02027.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02698.hp1 HG02896.hp2 HG02976.hp2 HG06807.hp1 NA18952.hp1 NA18967.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007	a0001c0001t0008 a0001c0001t0021 a0001c0001t0042 others(13): Show a0001c0001t0008 a0001c0001t0021 a0001c0001t0042 a0001c0001t0050 a0001c0001t0052 a0001c0001t0062 a0001c0001t0071 a0001c0001t0088 a0001c0001t0117 a0001c0001t0123 a0001c0002t0091 a0001c0002t0102 a0001c0003t0026 a0001c0003t0028 a0001c0003t0112 a0001c0007t0080	a0001c0001t0008g0051 a0001c0001t0021g0150 a0001c0001t0042g0012 others(13): Show a0001c0001t0008g0051 a0001c0001t0021g0150 a0001c0001t0042g0012 a0001c0001t0050g0026 a0001c0001t0052g0064 a0001c0001t0062g0087 a0001c0001t0071g0028 a0001c0001t0088g0104 a0001c0001t0117g0164 a0001c0001t0123g0090 a0001c0002t0091g0136 a0001c0002t0102g0094 a0001c0003t0026g0157 a0001c0003t0028g0005 a0001c0003t0112g0130 a0001c0007t0080g0162	16	169	0.0947	11	c.362 others(30): Show c.3624-2058_3624-2048dupTTTTTTTTTTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99618224	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03471.hp1 NA18906.hp1 HG02055.hp1 HG03471.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0004 a0001c0001t0005 a0001c0008t0005 a0001c0001t0004 a0001c0001t0005 a0001c0008t0005	a0001c0001t0004g0041 a0001c0001t0005g0075 a0001c0008t0005g0079 a0001c0001t0004g0041 a0001c0001t0005g0075 a0001c0008t0005g0079	3	100	0.0300	11	c.118 others(32): Show c.1185-16614_1185-16604dupAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99628723	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0002 a0001c0001t0015g0002	1	100	0.0100	11	c.118 others(32): Show c.1184+20892_1184+20902dupAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99696715	G G	GGCGCAAT others(4): Show GGCGCAATCATA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00438.hp1 others(95): Show HG00099.hp1 HG00099.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00738.hp1 HG00738.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02258.hp1 HG02258.hp2 HG02293.hp1 HG02293.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18971.hp1 NA18971.hp2 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0004 others(11): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0009 a0001c0014 a0002c0002 a0002c0007 a0002c0013 a0003c0006 a0004c0010 a0005c0011 a0006c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(59): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0022 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0028 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0006 a0001c0003t0034 a0001c0004t0004 a0001c0004t0005 a0001c0004t0007 a0001c0004t0014 a0001c0004t0020 a0001c0004t0029 a0001c0005t0001 a0001c0005t0003 a0001c0005t0004 a0001c0005t0005 a0001c0005t0009 a0001c0005t0027 a0001c0008t0005 a0001c0009t0009 a0001c0009t0021 a0001c0014t0004 a0002c0002t0001 a0002c0002t0002 a0002c0002t0005 a0002c0002t0011 a0002c0002t0013 a0002c0002t0018 a0002c0002t0023 a0002c0002t0035 a0002c0007t0001 a0002c0007t0006 a0002c0007t0008 a0002c0013t0019 a0003c0006t0001 a0003c0006t0003 a0003c0006t0006 a0004c0010t0005 a0005c0011t0009 a0006c0012t0032	a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 others(95): Show a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0051 a0001c0001t0001g0062 a0001c0001t0001g0080 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0036 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0003g0048 a0001c0001t0003g0084 a0001c0001t0003g0100 a0001c0001t0004g0041 a0001c0001t0004g0042 a0001c0001t0004g0050 a0001c0001t0004g0082 a0001c0001t0005g0075 a0001c0001t0006g0024 a0001c0001t0006g0076 a0001c0001t0007g0044 a0001c0001t0007g0078 a0001c0001t0008g0001 a0001c0001t0008g0009 a0001c0001t0009g0018 a0001c0001t0010g0055 a0001c0001t0010g0057 a0001c0001t0011g0088 a0001c0001t0012g0008 a0001c0001t0015g0002 a0001c0001t0016g0003 a0001c0001t0017g0010 a0001c0001t0022g0019 a0001c0001t0024g0058 a0001c0001t0025g0053 a0001c0001t0026g0056 a0001c0001t0028g0061 a0001c0001t0030g0077 a0001c0001t0031g0049 a0001c0001t0033g0038 a0001c0003t0001g0065 a0001c0003t0001g0066 a0001c0003t0001g0067 a0001c0003t0001g0073 a0001c0003t0002g0043 a0001c0003t0002g0064 a0001c0003t0003g0026 a0001c0003t0003g0046 a0001c0003t0006g0063 a0001c0003t0006g0089 a0001c0003t0034g0072 a0001c0004t0004g0097 a0001c0004t0005g0094 a0001c0004t0007g0093 a0001c0004t0007g0095 a0001c0004t0007g0096 a0001c0004t0014g0004 a0001c0004t0020g0011 a0001c0004t0029g0098 a0001c0005t0001g0070 a0001c0005t0003g0071 a0001c0005t0004g0083 a0001c0005t0004g0086 a0001c0005t0005g0092 a0001c0005t0009g0016 a0001c0005t0027g0085 a0001c0008t0005g0079 a0001c0008t0005g0091 a0001c0009t0009g0017 a0001c0009t0021g0013 a0001c0014t0004g0099 a0002c0002t0001g0059 a0002c0002t0002g0021 a0002c0002t0002g0028 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0005g0029 a0002c0002t0011g0040 a0002c0002t0013g0005 a0002c0002t0018g0015 a0002c0002t0023g0054 a0002c0002t0035g0087 a0002c0007t0001g0060 a0002c0007t0006g0081 a0002c0007t0008g0006 a0002c0007t0008g0007 a0002c0013t0019g0014 a0003c0006t0001g0034 a0003c0006t0001g0035 a0003c0006t0001g0068 a0003c0006t0003g0039 a0003c0006t0003g0069 a0003c0006t0006g0052 a0004c0010t0005g0074 a0005c0011t0009g0012 a0006c0012t0032g0090	98	100	0.9800	11	c.109 others(32): Show c.1092-24127_1092-24126insTATGATTGCGC	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	11/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99724271	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG01081.hp1 others(6): Show HG00438.hp1 HG00639.hp1 HG01081.hp1 HG01169.hp2 HG01261.hp1 HG01261.hp2 HG02258.hp1 HG03834.hp2 NA18971.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0003c0006	a0001c0001t0002 a0001c0001t0003 a0001c0005t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0005t0004 a0002c0002t0002 a0002c0002t0005 a0003c0006t0003	a0001c0001t0002g0045 a0001c0001t0003g0048 a0001c0005t0004g0083 others(6): Show a0001c0001t0002g0045 a0001c0001t0003g0048 a0001c0005t0004g0083 a0002c0002t0002g0021 a0002c0002t0002g0028 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0005g0029 a0003c0006t0003g0039	9	100	0.0900	11	c.109 others(30): Show c.1091+2795_1091+2805dupAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	11/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100014783	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG03130.hp2 HG03927.hp2 others(1): Show HG02976.hp2 HG03130.hp2 HG03927.hp2 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0003c0006 a0001c0001 a0001c0003 a0003c0006	a0001c0001t0001 a0001c0001t0025 a0001c0003t0003 others(1): Show a0001c0001t0001 a0001c0001t0025 a0001c0003t0003 a0003c0006t0006	a0001c0001t0001g0023 a0001c0001t0025g0053 a0001c0003t0003g0046 others(1): Show a0001c0001t0001g0023 a0001c0001t0025g0053 a0001c0003t0003g0046 a0003c0006t0006g0052	4	100	0.0400	11	c.54- others(26): Show c.54-5862_54-5852dupAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	4/24			chr2	TogoVar
AFG3L2_chr18_12323944_12382227	12332957	A A	ATAACATA others(4): Show ATAACATATACT	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	376	0.0027	11	c.217 others(30): Show c.2176-3175_2176-3174insAGTATATGTTA	AFG3L2	ENSG00000141385.12	transcript	ENST00000269143.8	protein_coding	16/16			chr18	TogoVar
AFG3L2_chr18_12323944_12382227	12332981	A A	ACTATAAT others(4): Show ACTATAATATAT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00558.hp2 others(33): Show HG00408.hp1 HG00423.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG01074.hp1 HG01255.hp2 HG01346.hp1 HG01928.hp1 HG02004.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02300.hp2 NA18612.hp1 NA18612.hp2 NA18943.hp2 NA18944.hp2 NA18948.hp1 NA18952.hp2 NA18954.hp1 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18977.hp2 NA18986.hp2 NA19000.hp1 NA19057.hp2 NA19060.hp2 NA19064.hp1 NA19068.hp1 NA19070.hp1 NA19081.hp1 NA19084.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0002t0001 a0001c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0113 others(26): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0140 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0187 a0001c0001t0001g0193 a0001c0001t0001g0222 a0001c0001t0001g0347 a0001c0001t0004g0030 a0001c0001t0009g0107 a0001c0002t0001g0337 a0001c0002t0001g0340 a0001c0003t0001g0326 a0001c0003t0001g0327 a0001c0003t0001g0328	36	376	0.0957	11	c.217 others(30): Show c.2176-3199_2176-3198insATATATTATAG	AFG3L2	ENSG00000141385.12	transcript	ENST00000269143.8	protein_coding	16/16			chr18	TogoVar
AFMID_chr17_78182362_78212702	78186691	A A	AGGGGAGG others(4): Show AGGGGAGGGGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0306 a0001c0001t0007g0306	1	446	0.0022	11	c.-68 others(20): Show c.-680_-679insGGGGAGGGGAG	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding		670		chr17	TogoVar
AFMID_chr17_78182362_78212702	78187960	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02040.hp1 HG02074.hp1 others(19): Show HG02027.hp2 HG02040.hp1 HG02074.hp1 HG02129.hp1 HG02647.hp2 NA18940.hp2 NA18944.hp2 NA18950.hp1 NA18959.hp1 NA18967.hp1 NA18989.hp1 NA18990.hp2 NA18994.hp1 NA19010.hp2 NA19012.hp1 NA19057.hp2 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19080.hp1 NA19082.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 a0001c0001t0029 a0001c0001t0035 a0001c0001t0047	a0001c0001t0002g0392 a0001c0001t0003g0323 a0001c0001t0004g0011 others(19): Show a0001c0001t0002g0392 a0001c0001t0003g0323 a0001c0001t0004g0011 a0001c0001t0004g0308 a0001c0001t0004g0311 a0001c0001t0004g0314 a0001c0001t0004g0316 a0001c0001t0004g0317 a0001c0001t0004g0320 a0001c0001t0004g0321 a0001c0001t0007g0309 a0001c0001t0007g0315 a0001c0001t0007g0322 a0001c0001t0007g0325 a0001c0001t0012g0011 a0001c0001t0012g0310 a0001c0001t0012g0312 a0001c0001t0012g0313 a0001c0001t0012g0324 a0001c0001t0029g0318 a0001c0001t0035g0011 a0001c0001t0047g0319	22	446	0.0493	11	c.63+ others(24): Show c.63+546_63+556dupAAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr17	TogoVar

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