Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GAL3ST2_chr2_241771822_241809287	241805964	C C	CCACAGGC others(4): Show CCACAGGCCACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	314	0.0032	11	c.17 others(22): Show c.1798_*1799insCACAGGCCACT	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		1678		chr2	TogoVar
GAL3ST2_chr2_241771822_241809287	241805964	C C	CCGCAGGC others(4): Show CCGCAGGCCACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 NA20300.hp1 HG03516.hp2 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0135 a0002c0002t0001g0149 a0002c0002t0001g0135 a0002c0002t0001g0149	2	314	0.0064	11	c.17 others(22): Show c.1798_*1799insCGCAGGCCACT	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		1678		chr2	TogoVar
GAL3ST2_chr2_241771822_241809287	241805965	C C	CGCAGGCC others(4): Show CGCAGGCCACCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG01517.hp1 HG03098.hp2 others(2): Show HG00642.hp1 HG01517.hp1 HG03098.hp2 HG03239.hp1 NA19010.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0001 a0006c0006t0001 a0001c0001t0001 a0006c0006t0001	a0001c0001t0001g0013 a0001c0001t0001g0033 a0001c0001t0001g0062 others(2): Show a0001c0001t0001g0013 a0001c0001t0001g0033 a0001c0001t0001g0062 a0001c0001t0001g0082 a0006c0006t0001g0096	5	314	0.0159	11	c.17 others(22): Show c.1799_*1800insGCAGGCCACCT	GAL3ST2	ENSG00000154252.12	transcript	ENST00000192314.7	protein_coding		1679		chr2	TogoVar
GALK2_chr15_49165247_49336882	49228687	A A	ATACACAT others(4): Show ATACACATATAT	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0052 a0001c0001t0007g0052	1	348	0.0029	11	c.267 others(28): Show c.267-7163_267-7162insACACATATATT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49228687	A A	ATATACAT others(4): Show ATATACATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 NA19240.hp2 HG01891.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0065 a0001c0001t0002g0071 a0001c0001t0002g0065 a0001c0001t0002g0071	2	348	0.0058	11	c.267 others(28): Show c.267-7163_267-7162insATACATATATT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49277137	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0015 a0001c0001t0006g0015	1	348	0.0029	11	c.505 others(28): Show c.505-4811_505-4801dupTTTTTTTTTTT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49299735	T T	TTTCTTTC others(4): Show TTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02486.hp1 NA18957.hp2 others(2): Show HG02273.hp2 HG02486.hp1 NA18957.hp2 NA18977.hp1 NA19079.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0004 a0001c0002t0003 a0001c0002t0004	a0001c0002t0003g0146 a0001c0002t0004g0181 a0001c0002t0004g0191 others(2): Show a0001c0002t0003g0146 a0001c0002t0004g0181 a0001c0002t0004g0191 a0001c0002t0004g0193 a0001c0002t0004g0194	5	348	0.0144	11	c.967 others(28): Show c.967+7200_967+7201insCTTTCTTTCTT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49324400	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00323.hp1 others(177): Show HG00099.hp2 HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00609.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00741.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01255.hp2 HG01257.hp2 HG01358.hp1 HG01361.hp2 HG01496.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG02004.hp1 HG02004.hp2 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02083.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02273.hp1 HG02293.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp1 HG02818.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18940.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp2 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18961.hp2 NA18966.hp1 NA18968.hp1 NA18969.hp1 NA18970.hp2 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18997.hp1 NA18998.hp1 NA18999.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19077.hp1 NA19079.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0007 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(36): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0018 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0043 a0001c0001t0044 a0001c0001t0049 a0001c0001t0055 a0001c0002t0003 a0001c0002t0004 a0001c0002t0037 a0001c0002t0038 a0001c0003t0008 a0001c0005t0048 a0001c0007t0001 a0003c0006t0042	a0001c0001t0001g0010 a0001c0001t0001g0250 a0001c0001t0001g0251 others(176): Show a0001c0001t0001g0010 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0267 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0312 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0336 a0001c0001t0001g0337 a0001c0001t0001g0338 a0001c0001t0001g0340 a0001c0001t0001g0346 a0001c0001t0002g0001 a0001c0001t0002g0043 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0062 a0001c0001t0002g0070 a0001c0001t0002g0076 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0097 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0148 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0211 a0001c0001t0005g0212 a0001c0001t0005g0213 a0001c0001t0005g0214 a0001c0001t0005g0222 a0001c0001t0005g0223 a0001c0001t0005g0225 a0001c0001t0005g0228 a0001c0001t0005g0229 a0001c0001t0005g0231 a0001c0001t0005g0233 a0001c0001t0005g0234 a0001c0001t0005g0235 a0001c0001t0005g0236 a0001c0001t0005g0237 a0001c0001t0005g0238 a0001c0001t0005g0239 a0001c0001t0005g0240 a0001c0001t0005g0241 a0001c0001t0005g0245 a0001c0001t0006g0012 a0001c0001t0006g0019 a0001c0001t0006g0320 a0001c0001t0008g0032 a0001c0001t0009g0056 a0001c0001t0009g0147 a0001c0001t0009g0216 a0001c0001t0009g0217 a0001c0001t0009g0218 a0001c0001t0009g0219 a0001c0001t0009g0220 a0001c0001t0009g0242 a0001c0001t0009g0243 a0001c0001t0010g0035 a0001c0001t0010g0204 a0001c0001t0010g0205 a0001c0001t0010g0207 a0001c0001t0012g0247 a0001c0001t0012g0253 a0001c0001t0012g0260 a0001c0001t0012g0261 a0001c0001t0013g0264 a0001c0001t0013g0265 a0001c0001t0013g0266 a0001c0001t0013g0268 a0001c0001t0013g0339 a0001c0001t0014g0249 a0001c0001t0014g0342 a0001c0001t0014g0343 a0001c0001t0014g0344 a0001c0001t0015g0063 a0001c0001t0015g0066 a0001c0001t0015g0069 a0001c0001t0016g0093 a0001c0001t0018g0117 a0001c0001t0020g0109 a0001c0001t0022g0311 a0001c0001t0022g0313 a0001c0001t0023g0271 a0001c0001t0023g0274 a0001c0001t0027g0316 a0001c0001t0028g0226 a0001c0001t0029g0215 a0001c0001t0030g0057 a0001c0001t0032g0114 a0001c0001t0033g0221 a0001c0001t0034g0227 a0001c0001t0035g0246 a0001c0001t0039g0345 a0001c0001t0040g0276 a0001c0001t0041g0315 a0001c0001t0043g0290 a0001c0001t0044g0323 a0001c0001t0049g0116 a0001c0001t0055g0282 a0001c0002t0003g0153 a0001c0002t0004g0177 a0001c0002t0004g0199 a0001c0002t0037g0203 a0001c0002t0038g0209 a0001c0003t0008g0123 a0001c0003t0008g0125 a0001c0003t0008g0126 a0001c0005t0048g0064 a0001c0007t0001g0294 a0003c0006t0042g0263	180	348	0.5172	11	c.117 others(30): Show c.1170-3549_1170-3539dupAAAAAAAAAAA	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALM_chr2_38661114_38739765	38703092	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA19002.hp2 NA18953.hp2 NA19002.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0146 a0002c0002t0001g0295 a0001c0001t0001g0146 a0002c0002t0001g0295	2	328	0.0061	11	c.634 others(30): Show c.634+13199_634+13200insATATATATATT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703092	A A	ATATATAT others(4): Show ATATATATATTT	intron_variant intron_variant	MODIFIER	HG01168.hp2 NA18945.hp1 NA19075.hp2 HG01168.hp2 NA18945.hp1 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0062 a0001c0001t0001g0142 a0001c0001t0007g0061 a0001c0001t0001g0062 a0001c0001t0001g0142 a0001c0001t0007g0061	3	328	0.0092	11	c.634 others(30): Show c.634+13199_634+13200insATATATATTTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703093	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02083.hp2 HG02129.hp2 others(1): Show HG02015.hp2 HG02083.hp2 HG02129.hp2 NA19056.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0071 a0001c0001t0001g0085 a0001c0001t0001g0191 others(1): Show a0001c0001t0001g0071 a0001c0001t0001g0085 a0001c0001t0001g0191 a0002c0002t0001g0286	4	328	0.0122	11	c.634 others(30): Show c.634+13199_634+13200insATATATATATA	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6			chr2	TogoVar
GALNS_chr16_88808734_88861947	88813162	T T	TCCAGGGC others(4): Show TCCAGGGCGGAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0295 a0001c0001t0001g0295	1	404	0.0025	11	c.12 others(22): Show c.1276_*1277insGTCCGCCCTGG	GALNS	ENSG00000141012.13	transcript	ENST00000268695.10	protein_coding		571		chr16	TogoVar
GALNT10_chr5_154185733_154425984	154288443	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0048	1	236	0.0042	11	c.160 others(28): Show c.160-6373_160-6372insGTGTGTGTGTG	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	1/11			chr5	TogoVar
GALNT10_chr5_154185733_154425984	154393057	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02630.hp1 HG01192.hp1 HG02630.hp1	a0001 a0001	a0001c0005 a0001c0013 a0001c0005 a0001c0013	a0001c0005t0005 a0001c0013t0001 a0001c0005t0005 a0001c0013t0001	a0001c0005t0005g0060 a0001c0013t0001g0187 a0001c0005t0005g0060 a0001c0013t0001g0187	2	236	0.0085	11	c.105 others(30): Show c.1056+6638_1056+6648dupAAAAAAAAAAA	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
GALNT11_chr7_152020674_152127340	152113712	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0005 a0005	a0005c0009 a0005c0009	a0005c0009t0001 a0005c0009t0001	a0005c0009t0001g0178 a0005c0009t0001g0178	1	284	0.0035	11	c.123 others(28): Show c.1233+346_1233+356dupTTTTTTTTTTT	GALNT11	ENSG00000178234.13	transcript	ENST00000430044.7	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT13_chr2_153866922_154458979	154014635	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01123.hp2 HG01168.hp2 others(9): Show HG01081.hp2 HG01123.hp2 HG01168.hp2 HG01516.hp2 HG02280.hp2 HG03209.hp1 NA18747.hp2 NA18939.hp2 NA18959.hp1 NA18961.hp1 NA18990.hp2 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0012 a0001c0001t0013 others(7): Show a0001c0001t0002 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0019 a0001c0001t0040 a0001c0001t0046 a0001c0001t0052 a0001c0001t0065 a0001c0001t0071	a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0131 others(9): Show a0001c0001t0002g0107 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0012g0182 a0001c0001t0013g0174 a0001c0001t0016g0173 a0001c0001t0019g0074 a0001c0001t0040g0082 a0001c0001t0046g0186 a0001c0001t0052g0187 a0001c0001t0065g0060 a0001c0001t0071g0175	12	214	0.0561	11	c.142 others(30): Show c.142+70001_142+70011dupTTTTTTTTTTT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154089675	C C	CAGCTGTG others(4): Show CAGCTGTGGGTG	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03486.hp1 HG02451.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0072 a0001c0001t0073 a0001c0001t0072 a0001c0001t0073	a0001c0001t0072g0080 a0001c0001t0073g0081 a0001c0001t0072g0080 a0001c0001t0073g0081	2	214	0.0094	11	c.143 others(30): Show c.143-50650_143-50640dupAGCTGTGGGTG	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154225133	T T	TAGATAGA others(4): Show TAGATAGATGAC	intron_variant intron_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	1	214	0.0047	11	c.312 others(30): Show c.312-16889_312-16888insGACAGATAGAT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154225160	T T	TGATAGAT others(4): Show TGATAGATGATA	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0006 a0001c0001t0066g0006	1	214	0.0047	11	c.312 others(30): Show c.312-16863_312-16862insGATAGATAGAT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154298539	T T	TTTATATA others(4): Show TTTATATATAAA	intron_variant intron_variant	MODIFIER	HG02486.hp1 NA19030.hp1 HG02486.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0043 a0001c0001t0023 a0001c0001t0043	a0001c0001t0023g0033 a0001c0001t0043g0213 a0001c0001t0023g0033 a0001c0001t0043g0213	2	214	0.0094	11	c.976 others(28): Show c.976-2867_976-2857dupATATATAAATT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154338334	C C	CTTTCATT others(4): Show CTTTCATTGTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01074.hp1 HG00099.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0019 a0001c0001t0008 a0001c0001t0019	a0001c0001t0008g0043 a0001c0001t0019g0076 a0001c0001t0008g0043 a0001c0001t0019g0076	2	214	0.0094	11	c.115 others(32): Show c.1156+36749_1156+36759dupCATTGTTTTTT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154351682	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02698.hp1 NA20805.hp1 HG02698.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0013 a0001c0001t0002 a0001c0001t0013	a0001c0001t0002g0135 a0001c0001t0013g0167 a0001c0001t0002g0135 a0001c0001t0013g0167	2	214	0.0094	11	c.115 others(32): Show c.1157-44281_1157-44271dupAAAAAAAAAAA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154394077	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02698.hp2 HG02809.hp2 others(2): Show HG01169.hp1 HG02698.hp2 HG02809.hp2 HG02922.hp1 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 others(1): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0022	a0001c0001t0005g0125 a0001c0001t0006g0112 a0001c0001t0013g0151 others(2): Show a0001c0001t0005g0125 a0001c0001t0006g0112 a0001c0001t0013g0151 a0001c0001t0022g0065 a0001c0001t0022g0066	5	214	0.0234	11	c.115 others(30): Show c.1157-1897_1157-1887dupAAAAAAAAAAA	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT13_chr2_153866922_154458979	154422645	G G	GTGTTTAT others(4): Show GTGTTTATGACT	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0191 a0001c0001t0010g0191	1	214	0.0047	11	c.139 others(32): Show c.1395+13564_1395+13574dupTGTTTATGACT	GALNT13	ENSG00000144278.15	transcript	ENST00000392825.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT14_chr2_30905467_31143440	30917076	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01361.hp2 HG01515.hp2 others(6): Show HG00099.hp1 HG01361.hp2 HG01515.hp2 HG02698.hp2 HG04199.hp2 NA18960.hp2 NA18991.hp2 NA19088.hp2 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0002c0004 a0001c0002 a0002c0003 a0002c0004	a0001c0002t0001 a0002c0003t0001 a0002c0003t0002 others(1): Show a0001c0002t0001 a0002c0003t0001 a0002c0003t0002 a0002c0004t0001	a0001c0002t0001g0031 a0002c0003t0001g0043 a0002c0003t0001g0054 others(6): Show a0001c0002t0001g0031 a0002c0003t0001g0043 a0002c0003t0001g0054 a0002c0003t0001g0057 a0002c0003t0001g0072 a0002c0003t0001g0110 a0002c0003t0001g0176 a0002c0003t0002g0215 a0002c0004t0001g0164	9	226	0.0398	11	c.138 others(30): Show c.1381-4745_1381-4735dupTTTTTTTTTTT	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	13/14			chr2	TogoVar
GALNT14_chr2_30905467_31143440	31038084	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	226	0.0044	11	c.130 others(30): Show c.130-45078_130-45077insATATATATATA	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	1/14			chr2	TogoVar
GALNT14_chr2_30905467_31143440	31038085	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02717.hp1 HG03516.hp1 others(3): Show HG02132.hp2 HG02717.hp1 HG03516.hp1 NA18966.hp2 NA18978.hp2 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0061 others(3): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0061 a0001c0001t0001g0076 a0001c0001t0001g0166 a0001c0001t0002g0212	6	226	0.0266	11	c.130 others(30): Show c.130-45079_130-45078insTATATATATAT	GALNT14	ENSG00000158089.15	transcript	ENST00000349752.10	protein_coding	1/14			chr2	TogoVar
GALNT15_chr3_16169680_16235165	16232465	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0357 a0001c0002t0013g0357	1	388	0.0026	11	c.49 others(22): Show c.4965_*4966insTATATATATAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2301		chr3	TogoVar
GALNT15_chr3_16169680_16235165	16232518	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18945.hp2 NA18945.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0240 a0001c0001t0002g0240	1	388	0.0026	11	c.50 others(22): Show c.5018_*5019insTATATATATAT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2354		chr3	TogoVar
GALNT15_chr3_16169680_16235165	16233094	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0003 a0003	a0003c0035 a0003c0035	a0003c0035t0010 a0003c0035t0010	a0003c0035t0010g0054 a0003c0035t0010g0054	1	388	0.0026	11	c.55 others(22): Show c.5594_*5595insTTTTTTTTTTT	GALNT15	ENSG00000131386.20	transcript	ENST00000339732.10	protein_coding		2930		chr3	TogoVar
GALNT16_chr14_69255158_69359466	69356554	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0006 a0001c0016t0006	a0001c0016t0006g0156 a0001c0016t0006g0156	1	306	0.0033	11	c.43 others(22): Show c.4386_*4387insTTTTTTTTTTT	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding		2089		chr14	TogoVar
GALNT16_chr14_69255158_69359466	69356829	T T	TCCAACAG others(4): Show TCCAACAGTGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0006	a0001c0005t0006g0140 a0001c0005t0006g0140	1	306	0.0033	11	c.46 others(22): Show c.4661_*4662insCCAACAGTGCA	GALNT16	ENSG00000100626.17	transcript	ENST00000448469.8	protein_coding		2364		chr14	TogoVar
GALNT17_chr7_71127144_71718599	71265118	A A	ATATATAT others(4): Show ATATATATATTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0067 a0001c0003t0002g0067	1	76	0.0132	11	c.239 others(30): Show c.239-70431_239-70430insATATATATTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71265118	A A	ATATATAT others(4): Show ATATATATTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp2 NA20129.hp1 HG01346.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0010 a0001c0007 a0002c0010	a0001c0007t0020 a0002c0010t0003 a0001c0007t0020 a0002c0010t0003	a0001c0007t0020g0005 a0002c0010t0003g0009 a0001c0007t0020g0005 a0002c0010t0003g0009	2	76	0.0263	11	c.239 others(30): Show c.239-70431_239-70430insATATATTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71265118	A A	ATATATTT others(4): Show ATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG03704.hp1 HG00323.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	a0001c0001t0004g0035 a0001c0001t0009g0063 a0001c0001t0004g0035 a0001c0001t0009g0063	2	76	0.0263	11	c.239 others(30): Show c.239-70431_239-70430insATATTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71377343	T T	TGATCAGT others(4): Show TGATCAGTCCAA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp1 others(51): Show HG00438.hp1 HG00438.hp2 HG00642.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01106.hp2 HG01243.hp1 HG01243.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03490.hp2 HG03492.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03704.hp2 HG03710.hp2 HG04228.hp2 NA19000.hp1 NA19000.hp2 NA19060.hp2 NA20129.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(27): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0021 a0001c0002t0002 a0001c0002t0003 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0002t0019 a0001c0003t0002 a0001c0004t0003 a0001c0004t0004 a0001c0005t0008 a0001c0006t0005 a0001c0007t0020 a0001c0008t0003 a0001c0009t0010	a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0037 others(51): Show a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0002g0015 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0021 a0001c0001t0002g0024 a0001c0001t0002g0027 a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0038 a0001c0001t0004g0046 a0001c0001t0004g0048 a0001c0001t0005g0050 a0001c0001t0005g0051 a0001c0001t0005g0052 a0001c0001t0005g0054 a0001c0001t0006g0057 a0001c0001t0006g0064 a0001c0001t0006g0066 a0001c0001t0008g0022 a0001c0001t0008g0026 a0001c0001t0009g0061 a0001c0001t0010g0072 a0001c0001t0011g0049 a0001c0001t0013g0073 a0001c0001t0013g0075 a0001c0001t0015g0076 a0001c0001t0016g0043 a0001c0001t0017g0047 a0001c0001t0018g0016 a0001c0001t0021g0010 a0001c0002t0002g0020 a0001c0002t0003g0006 a0001c0002t0007g0060 a0001c0002t0008g0025 a0001c0002t0010g0074 a0001c0002t0019g0017 a0001c0003t0002g0067 a0001c0003t0002g0069 a0001c0004t0003g0013 a0001c0004t0004g0030 a0001c0005t0008g0023 a0001c0006t0005g0053 a0001c0007t0020g0005 a0001c0008t0003g0007 a0001c0009t0010g0071	54	76	0.7105	11	c.423 others(30): Show c.423-10890_423-10889insTCAGTCCAAGA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71449108	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00741.hp1 HG01258.hp1 others(1): Show HG00323.hp2 HG00741.hp1 HG01258.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0012 a0001c0001t0013 a0001c0001t0004 a0001c0001t0012 a0001c0001t0013	a0001c0001t0004g0035 a0001c0001t0012g0008 a0001c0001t0012g0014 others(1): Show a0001c0001t0004g0035 a0001c0001t0012g0008 a0001c0001t0012g0014 a0001c0001t0013g0075	4	76	0.0526	11	c.962 others(30): Show c.962+28015_962+28025dupTTTTTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71647229	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0072 a0001c0001t0010g0072	1	76	0.0132	11	c.108 others(32): Show c.1081-18181_1081-18171dupTTTTTTTTTTT	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr7	TogoVar
GALNT17_chr7_71127144_71718599	71718051	T T	TTATTATT others(4): Show TTATTATTATTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0064 a0001c0001t0006g0064	1	76	0.0132	11	c.59 others(22): Show c.5905_*5906insTATTATTATTA	GALNT17	ENSG00000185274.13	transcript	ENST00000333538.10	protein_coding		4453		chr7	TogoVar
GALNT18_chr11_11265877_11627005	11269277	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp2 HG03139.hp2 HG02896.hp2 HG03139.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0001 a0001c0002t0001 a0001c0004t0001	a0001c0002t0001g0255 a0001c0004t0001g0231 a0001c0002t0001g0255 a0001c0004t0001g0231	2	260	0.0077	11	c.18 others(22): Show c.1866_*1867insAAAAAAAAAAA	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding		1599		chr11	TogoVar
GALNT18_chr11_11265877_11627005	11284908	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0051 a0001c0001t0002g0051	1	260	0.0039	11	c.167 others(30): Show c.1677+8110_1677+8120dupAAAAAAAAAAA	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	10/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11419619	A A	AAAAAAAG others(4): Show AAAAAAAGAAAG	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0235 a0001c0001t0001g0235	1	260	0.0039	11	c.595 others(30): Show c.595+13001_595+13002insCTTTCTTTTTT	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	3/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11479242	T T	TGAAAAAA others(4): Show TGAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0152 a0001c0002t0001g0152	1	260	0.0039	11	c.236 others(30): Show c.236-30307_236-30306insTTTTTTTTTTC	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11497371	C C	CACACACA others(4): Show CACACACACACA	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0033 a0001c0001t0002g0033	1	260	0.0039	11	c.236 others(30): Show c.236-48436_236-48435insTGTGTGTGTGT	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT18_chr11_11265877_11627005	11578330	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03130.hp1 HG03471.hp1 HG02886.hp2 HG03130.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0002 a0001c0002t0012 a0001c0003t0005 a0001c0001t0002 a0001c0002t0012 a0001c0003t0005	a0001c0001t0002g0041 a0001c0002t0012g0006 a0001c0003t0005g0005 a0001c0001t0002g0041 a0001c0002t0012g0006 a0001c0003t0005g0005	3	260	0.0115	11	c.235 others(30): Show c.235+43018_235+43028dupTTTTTTTTTTT	GALNT18	ENSG00000110328.6	transcript	ENST00000227756.5	protein_coding	1/10			chr11	TogoVar
GALNT2_chr1_230062238_230287122	230252843	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03516.hp1 HG03579.hp2 HG01109.hp1 HG03516.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0001t0008 a0001c0012t0025 a0001c0001t0001 a0001c0001t0008 a0001c0012t0025	a0001c0001t0001g0269 a0001c0001t0008g0305 a0001c0012t0025g0207 a0001c0001t0001g0269 a0001c0001t0008g0305 a0001c0012t0025g0207	3	324	0.0093	11	c.100 others(30): Show c.1009+2295_1009+2305dupTTTTTTTTTTT	GALNT2	ENSG00000143641.10	transcript	ENST00000366672.5	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
GALNT3_chr2_165742588_165799247	165767869	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18970.hp2 NA19065.hp2 NA18970.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0114 a0001c0001t0001g0123	2	386	0.0052	11	c.515 others(28): Show c.515+2306_515+2316dupAAAAAAAAAAA	GALNT3	ENSG00000115339.14	transcript	ENST00000392701.8	protein_coding	2/10			chr2	TogoVar
GALNT5_chr2_157252705_157323491	157256547	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18961.hp1 NA19011.hp2 NA19065.hp2 others(1): Show NA18961.hp1 NA19011.hp2 NA19065.hp2 NA19088.hp1	a0003 a0003	a0003c0004 a0003c0007 a0003c0004 a0003c0007	a0003c0004t0018 a0003c0004t0043 a0003c0004t0074 others(1): Show a0003c0004t0018 a0003c0004t0043 a0003c0004t0074 a0003c0007t0045	a0003c0004t0018g0219 a0003c0004t0043g0226 a0003c0004t0074g0220 others(1): Show a0003c0004t0018g0219 a0003c0004t0043g0226 a0003c0004t0074g0220 a0003c0007t0045g0211	4	282	0.0142	11	c.-15 others(22): Show c.-1536_-1535insAAAAAAAAAAA	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1157		chr2	TogoVar
GALNT5_chr2_157252705_157323491	157256569	A A	AAAAATAT others(4): Show AAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0078 a0001c0002t0078	a0001c0002t0078g0247 a0001c0002t0078g0247	1	282	0.0036	11	c.-15 others(22): Show c.-1514_-1513insAAAATATATAT	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1135		chr2	TogoVar
GALNT5_chr2_157252705_157323491	157256569	A A	AAATATAT others(4): Show AAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0054 a0001c0001t0005g0054	1	282	0.0036	11	c.-15 others(22): Show c.-1514_-1513insAATATATATAT	GALNT5	ENSG00000136542.9	transcript	ENST00000259056.5	protein_coding		1135		chr2	TogoVar

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