regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HNF4A_chr20_44350699_44437845 | 44368160 | A | ATTTTTTT others(4): Show |
intron_variant | MODIFIER | HG00140.hp1 HG01081.hp2 HG01123.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0032a0001c0001t0001g0065a0001c0001t0001g0071others(13): Show | 16 | 322 | 0.0497 | 11 | c.49+ others(28): Show |
HNF4A | ENSG00000101076.20 | transcript | ENST00000316673.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
HNF4A_chr20_44350699_44437845 | 44377681 | T | TAAACCTG others(4): Show |
intron_variant | MODIFIER | HG04199.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0189 | 1 | 322 | 0.0031 | 11 | c.49+ others(28): Show |
HNF4A | ENSG00000101076.20 | transcript | ENST00000316673.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
HNF4A_chr20_44350699_44437845 | 44385059 | C | CTTTTTTT others(4): Show |
intron_variant | MODIFIER | HG02300.hp2 HG03579.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0247a0001c0001t0007g0033 | 2 | 322 | 0.0062 | 11 | c.50- others(28): Show |
HNF4A | ENSG00000101076.20 | transcript | ENST00000316673.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
HNF4A_chr20_44350699_44437845 | 44388372 | A | ACCCCCCC others(4): Show |
intron_variant | MODIFIER | HG02071.hp2 HG02280.hp1 HG02559.hp2 others(13): Show |
a0001a0002a0005 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(12): Show | a0001c0001t0001g0239a0001c0001t0002g0193a0001c0001t0008g0134others(13): Show | 16 | 322 | 0.0497 | 11 | c.50- others(28): Show |
HNF4A | ENSG00000101076.20 | transcript | ENST00000316673.9 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
HNRNPA1L2_chr13_52637431_52648773 | 52639694 | C | CAAAAAAA others(4): Show |
upstream_gene_variant | MODIFIER | HG03486.hp2 NA19080.hp2 NA20129.hp1 |
a0001a0005a0010 | a0001c0001a0005c0006a0010c0008 | a0001c0001t0002a0005c0006t0002a0010c0008t0002 | a0001c0001t0002g0000a0005c0006t0002g0000a0010c0008t0002g0000 | 3 | 436 | 0.0069 | 11 | c.-27 others(22): Show |
HNRNPA1L2 | ENSG00000139675.13 | transcript | ENST00000357495.5 | protein_coding | 2736 | chr13 | TogoVar | ||||||
HNRNPA1L2_chr13_52637431_52648773 | 52639887 | T | TGTTTTGT others(4): Show |
upstream_gene_variant | MODIFIER | HG00544.hp1 HG01099.hp1 HG02559.hp2 others(11): Show |
a0001a0008 | a0001c0001a0008c0010 | a0001c0001t0001a0001c0001t0002a0008c0010t0001 | a0001c0001t0001g0000a0001c0001t0002g0000a0008c0010t0001g0000 | 14 | 436 | 0.0321 | 11 | c.-26 others(22): Show |
HNRNPA1L2 | ENSG00000139675.13 | transcript | ENST00000357495.5 | protein_coding | 2543 | chr13 | TogoVar | ||||||
HNRNPA1L2_chr13_52637431_52648773 | 52639897 | T | TTTTTTTT others(4): Show |
upstream_gene_variant | MODIFIER | HG01243.hp1 HG02886.hp2 HG03486.hp2 others(1): Show |
a0001a0010 | a0001c0001a0010c0008 | a0001c0001t0002a0010c0008t0002 | a0001c0001t0002g0000a0010c0008t0002g0000 | 4 | 436 | 0.0092 | 11 | c.-25 others(22): Show |
HNRNPA1L2 | ENSG00000139675.13 | transcript | ENST00000357495.5 | protein_coding | 2533 | chr13 | TogoVar | ||||||
HNRNPA3_chr2_177207794_177228959 | 177218052 | C | CTTTTTTT others(4): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02896.hp2 HG03453.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0013a0001c0001t0005g0049 | 4 | 332 | 0.0121 | 11 | c.961 others(26): Show |
HNRNPA3 | ENSG00000170144.22 | transcript | ENST00000392524.7 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
HNRNPA3_chr2_177207794_177228959 | 177227963 | C | CAAAAAAA others(4): Show |
downstream_gene_variant | MODIFIER | HG00140.hp1 HG00558.hp2 HG00733.hp1 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0023others(15): Show | 39 | 332 | 0.1175 | 11 | c.*85 others(22): Show |
HNRNPA3 | ENSG00000170144.22 | transcript | ENST00000392524.7 | protein_coding | 4005 | chr2 | TogoVar | ||||||
HNRNPC_chr14_21204147_21274442 | 21218681 | C | CAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG01243.hp2 HG02717.hp1 HG03130.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0112a0001c0001t0003g0113a0001c0001t0003g0116 | 3 | 388 | 0.0077 | 11 | c.366 others(28): Show |
HNRNPC | ENSG00000092199.19 | transcript | ENST00000553300.6 | protein_coding | 5/8 | chr14 | TogoVar | ||||||
HNRNPD_chr4_82347498_82378991 | 82348143 | A | ACCGCCCC others(4): Show |
downstream_gene_variant | MODIFIER | HG00639.hp2 HG01433.hp1 HG01891.hp2 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0031a0001c0001t0004g0069a0001c0001t0004g0070 | 3 | 332 | 0.0090 | 11 | c.*60 others(22): Show |
HNRNPD | ENSG00000138668.20 | transcript | ENST00000313899.12 | protein_coding | 4354 | chr4 | TogoVar | ||||||
HNRNPD_chr4_82347498_82378991 | 82348152 | C | CCCCCCCC others(4): Show |
downstream_gene_variant | MODIFIER | HG00099.hp2 HG01106.hp2 HG02056.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0001a0001c0001t0003g0004a0001c0001t0003g0010 | 3 | 332 | 0.0090 | 11 | c.*60 others(22): Show |
HNRNPD | ENSG00000138668.20 | transcript | ENST00000313899.12 | protein_coding | 4345 | chr4 | TogoVar | ||||||
HNRNPD_chr4_82347498_82378991 | 82376933 | A | ATTTTTTT others(4): Show |
upstream_gene_variant | MODIFIER | HG02723.hp1 HG02818.hp1 HG02970.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0012a0001c0001t0002g0032a0001c0001t0002g0074others(1): Show | 4 | 332 | 0.0121 | 11 | c.-32 others(22): Show |
HNRNPD | ENSG00000138668.20 | transcript | ENST00000313899.12 | protein_coding | 2943 | chr4 | TogoVar | ||||||
HNRNPF_chr10_43380618_43414186 | 43391343 | A | AGCCACTA others(4): Show |
intron_variant | MODIFIER | HG01257.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0130 | 1 | 364 | 0.0028 | 11 | c.-53 others(28): Show |
HNRNPF | ENSG00000169813.17 | transcript | ENST00000682386.1 | protein_coding | 3/3 | chr10 | TogoVar | ||||||
HNRNPLL_chr2_38556969_38607928 | 38565578 | A | ATAAGCTG others(4): Show |
intron_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0247 | 1 | 338 | 0.0030 | 11 | c.157 others(30): Show |
HNRNPLL | ENSG00000143889.16 | transcript | ENST00000449105.8 | protein_coding | 12/12 | chr2 | TogoVar | ||||||
HNRNPLL_chr2_38556969_38607928 | 38603063 | C | CCCCCCCC others(4): Show |
upstream_gene_variant | MODIFIER | NA18950.hp1 NA18994.hp2 |
a0002 | a0002c0002 | a0002c0002t0006 | a0002c0002t0006g0260a0002c0002t0006g0262 | 2 | 338 | 0.0059 | 11 | c.-43 others(20): Show |
HNRNPLL | ENSG00000143889.16 | transcript | ENST00000449105.8 | protein_coding | 136 | chr2 | TogoVar | ||||||
HNRNPR_chr1_23299688_23349284 | 23321163 | C | CAAAAAAA others(4): Show |
intron_variant | MODIFIER | NA18989.hp2 NA19000.hp1 NA19005.hp1 |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0270a0001c0001t0007g0271a0001c0001t0007g0277 | 3 | 354 | 0.0085 | 11 | c.811 others(26): Show |
HNRNPR | ENSG00000125944.22 | transcript | ENST00000302271.11 | protein_coding | 7/10 | chr1 | TogoVar | ||||||
HNRNPR_chr1_23299688_23349284 | 23331834 | T | TAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00438.hp2 HG00735.hp1 HG01071.hp2 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0008a0001c0001t0027others(2): Show | a0001c0001t0002g0013a0001c0001t0002g0066a0001c0001t0002g0156others(17): Show | 21 | 354 | 0.0593 | 11 | c.498 others(28): Show |
HNRNPR | ENSG00000125944.22 | transcript | ENST00000302271.11 | protein_coding | 5/10 | chr1 | TogoVar | ||||||
HNRNPR_chr1_23299688_23349284 | 23336116 | C | CAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(88): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0008others(81): Show | 91 | 354 | 0.2571 | 11 | c.384 others(28): Show |
HNRNPR | ENSG00000125944.22 | transcript | ENST00000302271.11 | protein_coding | 4/10 | chr1 | TogoVar | ||||||
HNRNPR_chr1_23299688_23349284 | 23336121 | A | AAAAAAAA others(4): Show |
intron_variant | MODIFIER | NA18945.hp2 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0071 | 1 | 354 | 0.0028 | 11 | c.384 others(28): Show |
HNRNPR | ENSG00000125944.22 | transcript | ENST00000302271.11 | protein_coding | 4/10 | chr1 | TogoVar | ||||||
HNRNPUL1_chr19_41259372_41312787 | 41260298 | C | CTTTTTTT others(4): Show |
upstream_gene_variant | MODIFIER | HG02886.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0094 | 1 | 290 | 0.0035 | 11 | c.-42 others(22): Show |
HNRNPUL1 | ENSG00000105323.18 | transcript | ENST00000392006.8 | protein_coding | 4073 | chr19 | TogoVar | ||||||
HNRNPUL1_chr19_41259372_41312787 | 41308515 | A | AGACGGGC others(4): Show |
downstream_gene_variant | MODIFIER | HG03139.hp2 HG03225.hp1 |
a0001 | a0001c0010a0001c0011 | a0001c0010t0003a0001c0011t0001 | a0001c0010t0003g0185a0001c0011t0001g0186 | 2 | 290 | 0.0069 | 11 | c.*19 others(22): Show |
HNRNPUL1 | ENSG00000105323.18 | transcript | ENST00000392006.8 | protein_coding | 729 | chr19 | TogoVar | ||||||
HOGA1_chr10_97579389_97617802 | 97593029 | C | CAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00140.hp2 HG04184.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0313a0001c0002t0001g0317 | 2 | 422 | 0.0047 | 11 | c.212 others(28): Show |
HOGA1 | ENSG00000241935.9 | transcript | ENST00000370646.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
HOMER1_chr5_79367636_79519134 | 79378221 | T | TTAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00438.hp2 HG01109.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0019others(1): Show | a0001c0001t0001g0133a0001c0001t0001g0164a0001c0001t0001g0177others(7): Show | 10 | 290 | 0.0345 | 11 | c.877 others(28): Show |
HOMER1 | ENSG00000152413.15 | transcript | ENST00000334082.11 | protein_coding | 8/8 | chr5 | TogoVar | ||||||
HOMER1_chr5_79367636_79519134 | 79409084 | G | GAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00609.hp2 others(98): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0118a0001c0001t0001g0131a0001c0001t0001g0133others(98): Show | 101 | 290 | 0.3483 | 11 | c.528 others(28): Show |
HOMER1 | ENSG00000152413.15 | transcript | ENST00000334082.11 | protein_coding | 5/8 | chr5 | TogoVar | ||||||
HOMER1_chr5_79367636_79519134 | 79409084 | G | GGAAAAAA others(4): Show |
intron_variant | MODIFIER | HG00099.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0152 | 1 | 290 | 0.0035 | 11 | c.528 others(28): Show |
HOMER1 | ENSG00000152413.15 | transcript | ENST00000334082.11 | protein_coding | 5/8 | chr5 | TogoVar | ||||||
HOMER2_chr15_82843983_82957720 | 82860949 | T | TGAGAGAG others(4): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00597.hp2 HG00609.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0036a0001c0001t0001g0048a0001c0001t0001g0081others(6): Show | 9 | 348 | 0.0259 | 11 | c.388 others(28): Show |
HOMER2 | ENSG00000103942.13 | transcript | ENST00000450735.7 | protein_coding | 4/8 | chr15 | TogoVar | ||||||
HOMER2_chr15_82843983_82957720 | 82868542 | T | TATATATA others(4): Show |
intron_variant | MODIFIER | HG00733.hp2 HG01993.hp1 NA19043.hp1 |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0003 | a0001c0001t0001g0006a0001c0001t0001g0188a0001c0005t0003g0083 | 3 | 348 | 0.0086 | 11 | c.295 others(28): Show |
HOMER2 | ENSG00000103942.13 | transcript | ENST00000450735.7 | protein_coding | 3/8 | chr15 | TogoVar | ||||||
HOMER2_chr15_82843983_82957720 | 82928940 | T | TAAAAAAA others(4): Show |
intron_variant | MODIFIER | HG06807.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0177 | 1 | 348 | 0.0029 | 11 | c.5+2 others(26): Show |
HOMER2 | ENSG00000103942.13 | transcript | ENST00000450735.7 | protein_coding | 1/8 | chr15 | TogoVar | ||||||
HOOK1_chr1_59809949_59881322 | 59855963 | T | TATATATA others(4): Show |
intron_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0185 | 1 | 252 | 0.0040 | 11 | c.124 others(30): Show |
HOOK1 | ENSG00000134709.13 | transcript | ENST00000371208.5 | protein_coding | 12/21 | chr1 | TogoVar | ||||||
HOOK3_chr8_42891978_43035535 | 42927244 | G | GGTTTTTT others(4): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02055.hp1 HG02109.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0020a0001c0001t0021others(8): Show | a0001c0001t0003g0003a0001c0001t0003g0006a0001c0001t0003g0008others(19): Show | 22 | 162 | 0.1358 | 11 | c.216 others(28): Show |
HOOK3 | ENSG00000168172.9 | transcript | ENST00000307602.9 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
HOOK3_chr8_42891978_43035535 | 42938217 | C | CTTTTTTT others(4): Show |
intron_variant | MODIFIER | HG01261.hp1 HG02451.hp1 HG02615.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0039a0001c0001t0044others(2): Show | a0001c0001t0003g0003a0001c0001t0003g0014a0001c0001t0039g0001others(3): Show | 6 | 162 | 0.0370 | 11 | c.268 others(28): Show |
HOOK3 | ENSG00000168172.9 | transcript | ENST00000307602.9 | protein_coding | 4/21 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
HOPX_chr4_56642998_56686296 | 56647133 | C | CAAAAAAA others(4): Show |
downstream_gene_variant | MODIFIER | HG02717.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0170 | 1 | 376 | 0.0027 | 11 | c.*15 others(22): Show |
HOPX | ENSG00000171476.23 | transcript | ENST00000420433.6 | protein_coding | 864 | chr4 | TogoVar | ||||||
HORMAD1_chr1_150693060_150725895 | 150693799 | G | GTTGTTTG others(4): Show |
downstream_gene_variant | MODIFIER | HG02015.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0013 | 1 | 392 | 0.0026 | 11 | c.*48 others(22): Show |
HORMAD1 | ENSG00000143452.16 | transcript | ENST00000361824.7 | protein_coding | 4260 | chr1 | TogoVar | ||||||
HORMAD2_chr22_30075464_30182075 | 30078607 | C | CAAAAAAA others(4): Show |
upstream_gene_variant | MODIFIER | HG01175.hp1 HG01928.hp1 HG02109.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0278a0001c0001t0001g0282a0001c0001t0001g0285others(11): Show | 14 | 350 | 0.0400 | 11 | c.-19 others(22): Show |
HORMAD2 | ENSG00000176635.18 | transcript | ENST00000336726.11 | protein_coding | 1856 | chr22 | TogoVar | ||||||
HORMAD2_chr22_30075464_30182075 | 30103649 | A | ATTTTTTT others(4): Show |
intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0080 | 1 | 350 | 0.0029 | 11 | c.257 others(26): Show |
HORMAD2 | ENSG00000176635.18 | transcript | ENST00000336726.11 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
HORMAD2_chr22_30075464_30182075 | 30125216 | C | CTTTTTTT others(4): Show |
intron_variant | MODIFIER | HG01175.hp2 HG02895.hp1 HG02895.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0087a0001c0001t0001g0113a0001c0001t0001g0345 | 3 | 350 | 0.0086 | 11 | c.819 others(28): Show |
HORMAD2 | ENSG00000176635.18 | transcript | ENST00000336726.11 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
HOXA10_chr7_27165605_27179320 | 27169093 | G | GTGTGTGT others(4): Show |
downstream_gene_variant | MODIFIER | HG02922.hp2 NA19004.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 436 | 0.0046 | 11 | c.*28 others(22): Show |
HOXA10 | ENSG00000253293.6 | transcript | ENST00000283921.5 | protein_coding | 1511 | chr7 | TogoVar | ||||||
HOXA13_chr7_27189364_27205091 | 27202822 | T | TAAAAAAA others(4): Show |
upstream_gene_variant | MODIFIER | HG01069.hp2 HG01081.hp1 HG01255.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0001a0001c0001t0003g0003a0001c0001t0004g0027others(3): Show | 14 | 416 | 0.0337 | 11 | c.-27 others(22): Show |
HOXA13 | ENSG00000106031.9 | transcript | ENST00000649031.1 | protein_coding | 2732 | chr7 | TogoVar | ||||||
HOXA3_chr7_27102010_27157583 | 27153452 | C | CACTCGAC others(4): Show |
upstream_gene_variant | MODIFIER | HG04199.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0180 | 1 | 326 | 0.0031 | 11 | c.-16 others(22): Show |
HOXA3 | ENSG00000105997.23 | transcript | ENST00000612286.5 | protein_coding | 870 | chr7 | TogoVar | ||||||
HOXA9_chr7_27157438_27170537 | 27169093 | G | GTGTGTGT others(4): Show |
upstream_gene_variant | MODIFIER | HG02922.hp2 NA18944.hp1 NA19070.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0002 | a0001c0001t0001g0001a0002c0003t0002g0008 | 3 | 432 | 0.0069 | 11 | c.-36 others(22): Show |
HOXA9 | ENSG00000078399.19 | transcript | ENST00000343483.7 | protein_coding | 3557 | chr7 | TogoVar | ||||||
HOXB13_chr17_48719763_48733750 | 48731314 | C | CAAAAAAA others(4): Show |
upstream_gene_variant | MODIFIER | NA18954.hp1 NA19090.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0003t0003 | a0001c0001t0002g0002a0001c0003t0003g0007 | 2 | 426 | 0.0047 | 11 | c.-27 others(22): Show |
HOXB13 | ENSG00000159184.8 | transcript | ENST00000290295.8 | protein_coding | 2565 | chr17 | TogoVar | ||||||
HOXB1_chr17_48523526_48536011 | 48528163 | C | CAAAAAAA others(4): Show |
downstream_gene_variant | MODIFIER | HG02165.hp2 HG02486.hp2 HG02622.hp1 others(1): Show |
a0001a0003a0005 | a0001c0001a0003c0003a0005c0007 | a0001c0001t0001a0003c0003t0001a0005c0007t0001 | a0001c0001t0001g0001a0003c0003t0001g0003a0005c0007t0001g0014 | 4 | 426 | 0.0094 | 11 | c.*13 others(22): Show |
HOXB1 | ENSG00000120094.9 | transcript | ENST00000239174.7 | protein_coding | 362 | chr17 | TogoVar | ||||||
HOXB2_chr17_48537655_48550109 | 48538808 | T | TAAAAAAA others(4): Show |
downstream_gene_variant | MODIFIER | HG02132.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 | 1 | 426 | 0.0024 | 11 | c.*42 others(22): Show |
HOXB2 | ENSG00000173917.11 | transcript | ENST00000330070.6 | protein_coding | 3846 | chr17 | TogoVar | ||||||
HOXB3_chr17_48543870_48595241 | 48561183 | A | ACACACAC others(4): Show |
intron_variant | MODIFIER | NA19000.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0258 | 1 | 374 | 0.0027 | 11 | c.-24 others(30): Show |
HOXB3 | ENSG00000120093.12 | transcript | ENST00000498678.6 | protein_coding | 2/4 | chr17 | TogoVar | ||||||
HOXB6_chr17_48590751_48609986 | 48601015 | T | TGTGTGTG others(4): Show |
intron_variant | MODIFIER | HG00741.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0092 | 1 | 394 | 0.0025 | 11 | c.-78 others(28): Show |
HOXB6 | ENSG00000108511.10 | transcript | ENST00000225648.4 | protein_coding | 2/3 | chr17 | TogoVar | ||||||
HOXC11_chr12_53968126_53982643 | 53976127 | C | CTTTTTTT others(4): Show |
3_prime_UTR_variant | MODIFIER | HG02970.hp2 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0049a0001c0001t0050 | a0001c0001t0049g0001a0001c0001t0050g0001 | 2 | 396 | 0.0051 | 11 | c.*72 others(20): Show |
HOXC11 | ENSG00000123388.4 | transcript | ENST00000546378.1 | protein_coding | 2/2 | 731 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||
HOXC13_chr12_53933831_53951544 | 53942154 | C | CTTTTTTT others(4): Show |
intron_variant | MODIFIER | HG03654.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0070 | 1 | 402 | 0.0025 | 11 | c.736 others(28): Show |
HOXC13 | ENSG00000123364.5 | transcript | ENST00000243056.5 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
HOXC4_chr12_54048835_54061030 | 54058950 | G | GTGTGTGT others(4): Show |
downstream_gene_variant | MODIFIER | HG01099.hp2 NA18965.hp1 NA19068.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006 | a0001c0001t0002g0001a0001c0001t0004g0001a0001c0001t0006g0001 | 3 | 400 | 0.0075 | 11 | c.*37 others(22): Show |
HOXC4 | ENSG00000198353.8 | transcript | ENST00000430889.3 | protein_coding | 2921 | chr12 | TogoVar | ||||||
HOXC8_chr12_54003985_54017769 | 54014000 | T | TTCTCTTC others(4): Show |
downstream_gene_variant | MODIFIER | HG01109.hp1 NA19003.hp2 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0015 | a0001c0001t0004g0001a0001c0001t0015g0001 | 2 | 306 | 0.0065 | 11 | c.*26 others(22): Show |
HOXC8 | ENSG00000037965.6 | transcript | ENST00000040584.6 | protein_coding | 1232 | chr12 | TogoVar |