Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TLK1_chr2_170985823_171165893	170986511	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0097 a0001c0001t0004g0097	1	61	0.0164	11	c.72 others(22): Show c.7268_*7269insATATATATATA	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding		4311		chr2	TogoVar
TLK1_chr2_170985823_171165893	170986513	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG03516.hp1 HG02257.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0256 a0001c0001t0017g0257 a0001c0001t0017g0256 a0001c0001t0017g0257	2	14	0.1429	11	c.72 others(22): Show c.7266_*7267insATATATATATA	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding		4309		chr2	TogoVar
TLK1_chr2_170985823_171165893	171003273	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0188 a0001c0001t0010g0188	1	40	0.0250	11	c.190 others(30): Show c.1904+2863_1904+2873dupTTTTTTTTTTT	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	18/20			chr2	TogoVar
TLK1_chr2_170985823_171165893	171101346	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0254 a0001c0001t0025g0254	1	142	0.0070	11	c.258 others(30): Show c.258+16382_258+16392dupTTTTTTTTTTT	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	2/20			chr2	TogoVar
TLK1_chr2_170985823_171165893	171160217	C C	CGGGGGGG others(4): Show CGGGGGGGGCGG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02622.hp1 HG02897.hp1 others(2): Show HG02559.hp1 HG02622.hp1 HG02897.hp1 HG02970.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0014 a0001c0001t0001 a0001c0001t0004 a0001c0001t0014	a0001c0001t0001g0094 a0001c0001t0004g0093 a0001c0001t0004g0113 others(2): Show a0001c0001t0001g0094 a0001c0001t0004g0093 a0001c0001t0004g0113 a0001c0001t0004g0209 a0001c0001t0014g0259	5	98	0.0510	11	c.139 others(24): Show c.139+72_139+73insCCGCCCCCCCC	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	1/20			chr2	TogoVar
TLK1_chr2_170985823_171165893	171160740	T T	TCGGAGCG others(4): Show TCGGAGCGCGGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02109.hp1 HG02257.hp2 HG03516.hp1 HG02109.hp1 HG02257.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0256 a0001c0001t0017g0257 a0001c0001t0017g0258 a0001c0001t0017g0256 a0001c0001t0017g0257 a0001c0001t0017g0258	3	261	0.0115	11	c.-32 others(20): Show c.-323_-313dupCCCGCGCTCCG	TLK1	ENSG00000198586.14	transcript	ENST00000431350.7	protein_coding	1/21	313		chr2	TogoVar
TLK2_chr17_62473825_62620481	62502028	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00735.hp1 HG01109.hp1 others(15): Show HG00609.hp2 HG00735.hp1 HG01109.hp1 HG01243.hp2 HG01934.hp1 HG02027.hp1 HG02486.hp2 HG02698.hp1 HG03486.hp1 NA18940.hp2 NA18943.hp1 NA18963.hp2 NA18999.hp2 NA19000.hp1 NA19060.hp1 NA19079.hp2 NA19080.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0024 a0001c0001t0001 a0001c0001t0018 a0001c0001t0024	a0001c0001t0001g0176 a0001c0001t0001g0187 a0001c0001t0001g0190 others(15): Show a0001c0001t0001g0176 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0202 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0273 a0001c0001t0018g0241 a0001c0001t0024g0251	18	211	0.0853	11	c.82- others(28): Show c.82-18745_82-18744insTTTTTTTTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	2/21			chr17	TogoVar
TLK2_chr17_62473825_62620481	62505407	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01167.hp2 HG02965.hp2 others(1): Show HG01109.hp2 HG01167.hp2 HG02965.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0017 a0001c0001t0001 a0001c0001t0017	a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0229 others(1): Show a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0229 a0001c0001t0017g0284	4	5	0.8000	11	c.82- others(28): Show c.82-15350_82-15340dupTTTTTTTTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	2/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLK2_chr17_62473825_62620481	62540400	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03017.hp1 NA18954.hp2 HG02647.hp1 HG03017.hp1 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0002t0003 a0001c0001t0001 a0001c0001t0006 a0001c0002t0003	a0001c0001t0001g0222 a0001c0001t0006g0041 a0001c0002t0003g0060 a0001c0001t0001g0222 a0001c0001t0006g0041 a0001c0002t0003g0060	3	22	0.1364	11	c.531 others(28): Show c.531+4076_531+4086dupTTTTTTTTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	7/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLK2_chr17_62473825_62620481	62576966	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02055.hp1 HG02080.hp1 others(5): Show HG01099.hp1 HG02055.hp1 HG02080.hp1 HG02080.hp2 HG02155.hp2 HG02622.hp1 HG02886.hp1 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 others(3): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0022	a0001c0001t0001g0289 a0001c0002t0002g0135 a0001c0002t0003g0069 others(5): Show a0001c0001t0001g0289 a0001c0002t0002g0135 a0001c0002t0003g0069 a0001c0002t0004g0139 a0001c0002t0004g0140 a0001c0002t0005g0038 a0001c0002t0005g0137 a0001c0002t0022g0138	8	102	0.0784	11	c.118 others(28): Show c.1188+195_1188+205dupTTTTTTTTTTT	TLK2	ENSG00000146872.19	transcript	ENST00000346027.10	protein_coding	13/21		INFO_REALIGN_3_PRIME	chr17	TogoVar
TLL1_chr4_165868237_166109457	165895683	C C	CATATAGA others(4): Show CATATAGAAATG	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0043 a0001c0001t0007g0043	1	248	0.0040	11	c.169 others(30): Show c.169+21611_169+21621dupATATAGAAATG	TLL1	ENSG00000038295.8	transcript	ENST00000061240.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
TLL1_chr4_165868237_166109457	165963054	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02145.hp1 HG02717.hp1 HG01891.hp2 HG02145.hp1 HG02717.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0003c0004t0014 a0001c0001t0001 a0001c0001t0002 a0003c0004t0014	a0001c0001t0001g0066 a0001c0001t0002g0079 a0003c0004t0014g0147 a0001c0001t0001g0066 a0001c0001t0002g0079 a0003c0004t0014g0147	3	134	0.0224	11	c.170 others(30): Show c.170-26311_170-26301dupAAAAAAAAAAA	TLL1	ENSG00000038295.8	transcript	ENST00000061240.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
TLL2_chr10_96359608_96518926	96415586	A A	AAAAAATG others(4): Show AAAAAATGCTTC	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0032 a0001c0001t0002g0032	1	254	0.0039	11	c.924 others(28): Show c.924-2281_924-2271dupGAAGCATTTTT	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	7/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96459703	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18962.hp1 NA18950.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0121 a0001c0001t0006g0158 a0001c0001t0002g0121 a0001c0001t0006g0158	2	144	0.0139	11	c.287 others(30): Show c.287-13536_287-13535insATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96459705	A A	AAATATAT others(4): Show AAATATATATAT	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp2 NA19066.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0037 a0001c0001t0002g0153 a0001c0001t0001g0037 a0001c0001t0002g0153	2	131	0.0153	11	c.287 others(30): Show c.287-13538_287-13537insATATATATATT	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96459705	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 NA20752.hp2 HG02896.hp2 HG02897.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0008t0009 a0001c0001t0001 a0001c0008t0009	a0001c0001t0001g0055 a0001c0008t0009g0230 a0001c0008t0009g0231 a0001c0001t0001g0055 a0001c0008t0009g0230 a0001c0008t0009g0231	3	132	0.0227	11	c.287 others(30): Show c.287-13538_287-13537insATATATATATA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLL2_chr10_96359608_96518926	96476238	A A	ATTCTTTT others(4): Show ATTCTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	250	0.0040	11	c.286 others(28): Show c.286+4110_286+4111insAAAAAAAAGAA	TLL2	ENSG00000095587.9	transcript	ENST00000357947.4	protein_coding	2/20			chr10	TogoVar
TLN2_chr15_62385550_62849631	62664857	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01192.hp1 HG03017.hp2 HG00099.hp2 HG01192.hp1 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0011 a0001c0001t0001 a0001c0006t0011	a0001c0001t0001g0028 a0001c0001t0001g0109 a0001c0006t0011g0128 a0001c0001t0001g0028 a0001c0001t0001g0109 a0001c0006t0011g0128	3	33	0.0909	11	c.788 others(28): Show c.788+6970_788+6980dupAAAAAAAAAAA	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	9/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62673310	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG02071.hp2 HG02647.hp2 others(3): Show HG01952.hp1 HG02071.hp2 HG02647.hp2 HG03041.hp1 HG03225.hp1 HG03486.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0001c0019 others(3): Show a0001c0001 a0001c0006 a0001c0019 a0001c0059 a0002c0009 a0002c0050	a0001c0001t0001 a0001c0006t0002 a0001c0019t0005 others(3): Show a0001c0001t0001 a0001c0006t0002 a0001c0019t0005 a0001c0059t0007 a0002c0009t0006 a0002c0050t0008	a0001c0001t0001g0019 a0001c0006t0002g0009 a0001c0019t0005g0144 others(3): Show a0001c0001t0001g0019 a0001c0006t0002g0009 a0001c0019t0005g0144 a0001c0059t0007g0100 a0002c0009t0006g0093 a0002c0050t0008g0020	6	36	0.1667	11	c.789 others(26): Show c.789-509_789-499dupTTTTTTTTTTT	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	9/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62677806	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02717.hp1 HG02886.hp1 others(2): Show HG00639.hp1 HG02717.hp1 HG02886.hp1 HG03209.hp1 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0004 a0001c0008 others(2): Show a0001c0002 a0001c0004 a0001c0008 a0002c0014 a0002c0030	a0001c0002t0004 a0001c0004t0005 a0001c0008t0004 others(2): Show a0001c0002t0004 a0001c0004t0005 a0001c0008t0004 a0002c0014t0023 a0002c0030t0029	a0001c0002t0004g0083 a0001c0004t0005g0117 a0001c0008t0004g0086 others(2): Show a0001c0002t0004g0083 a0001c0004t0005g0117 a0001c0008t0004g0086 a0002c0014t0023g0094 a0002c0030t0029g0071	5	24	0.2083	11	c.957 others(28): Show c.957+2490_957+2500dupTTTTTTTTTTT	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	11/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TLN2_chr15_62385550_62849631	62689877	T T	TTTTTTTT others(4): Show TTTTTTTTTTTA	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp2 HG04228.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0011 a0001c0001t0001 a0001c0004t0011	a0001c0001t0001g0039 a0001c0004t0011g0046 a0001c0001t0001g0039 a0001c0004t0011g0046	2	48	0.0417	11	c.111 others(30): Show c.1114-2963_1114-2962insTTTTTTTTTTA	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	12/58			chr15	TogoVar
TLN2_chr15_62385550_62849631	62713915	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02735.hp1 HG01255.hp2 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0043 a0001c0001t0001 a0001c0005t0043	a0001c0001t0001g0049 a0001c0005t0043g0055 a0001c0001t0001g0049 a0001c0005t0043g0055	2	88	0.0227	11	c.263 others(30): Show c.2634+1838_2634+1839insATATATATATA	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	22/58			chr15	TogoVar
TLR10_chr4_38767238_38787990	38770703	T T	TATATATA others(4): Show TATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0003 a0003c0006t0003	a0003c0006t0003g0090 a0003c0006t0003g0090	1	410	0.0024	11	c.24 others(22): Show c.2451_*2452insTATATATATAT	TLR10	ENSG00000174123.11	transcript	ENST00000308973.9	protein_coding		1534		chr4	TogoVar
TLR2_chr4_153679280_153711260	153681398	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0002 a0001c0003t0002g0002	1	66	0.0152	11	c.-31 others(22): Show c.-3125_-3124insAAAAAAAAAAA	TLR2	ENSG00000137462.9	transcript	ENST00000642700.2	protein_coding		2881		chr4	TogoVar
TLR2_chr4_153679280_153711260	153702762	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	33	0.0303	11	c.-16 others(26): Show c.-16-130_-16-129insGTGTGTGTGTG	TLR2	ENSG00000137462.9	transcript	ENST00000642700.2	protein_coding	2/2			chr4	TogoVar
TLR3_chr4_186064156_186093073	186082224	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp2 HG02630.hp1 others(8): Show HG02109.hp1 HG02486.hp2 HG02630.hp1 HG02809.hp1 HG02965.hp1 HG02970.hp1 HG03195.hp1 HG03669.hp2 NA19030.hp2 NA19240.hp2 NA20300.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0011	a0001c0001 a0001c0004 a0002c0003 others(2): Show a0001c0001 a0001c0004 a0002c0003 a0003c0006 a0011c0013	a0001c0001t0020 a0001c0004t0013 a0002c0003t0001 others(3): Show a0001c0001t0020 a0001c0004t0013 a0002c0003t0001 a0002c0003t0046 a0003c0006t0007 a0011c0013t0013	a0001c0001t0020g0114 a0001c0004t0013g0119 a0002c0003t0001g0109 others(6): Show a0001c0001t0020g0114 a0001c0004t0013g0119 a0002c0003t0001g0109 a0002c0003t0046g0171 a0003c0006t0007g0025 a0003c0006t0007g0117 a0003c0006t0007g0122 a0003c0006t0007g0194 a0011c0013t0013g0069	11	44	0.2500	11	c.634 others(24): Show c.634-79_634-69dupAAAAAAAAAAA	TLR3	ENSG00000164342.14	transcript	ENST00000296795.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr4	TogoVar
TLR5_chr1_223104404_223148248	223137950	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0006 a0006	a0006c0008 a0006c0008	a0006c0008t0001 a0006c0008t0001	a0006c0008t0001g0222 a0006c0008t0001g0222	1	61	0.0164	11	c.-43 others(28): Show c.-438-698_-438-688dupAAAAAAAAAAA	TLR5	ENSG00000187554.14	transcript	ENST00000642603.2	protein_coding	2/5			chr1	TogoVar
TLR6_chr4_38817897_38861817	38858884	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0012 a0002c0003t0004g0012	1	405	0.0025	11	c.-21 others(22): Show c.-2189_-2188insCTTTCTTTCTT	TLR6	ENSG00000174130.13	transcript	ENST00000508254.6	protein_coding		2068		chr4	TogoVar
TLR9_chr3_52216080_52230645	52219996	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	285	0.0035	11	c.12 others(22): Show c.1220_*1221insTTTTTTTTTTT	TLR9	ENSG00000239732.4	transcript	ENST00000360658.3	protein_coding		1083		chr3	TogoVar
TM2D1_chr1_61676046_61730141	61691932	A A	AAAAAAAA others(4): Show AAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA21309.hp1 HG03139.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	2	220	0.0091	11	c.513 others(28): Show c.513+2764_513+2765insATTTTTTTTTT	TM2D1	ENSG00000162604.13	transcript	ENST00000606498.5	protein_coding	5/6			chr1	TogoVar
TM2D1_chr1_61676046_61730141	61691932	A A	AAAAAAAT others(4): Show AAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0275 a0001c0001t0001g0275	1	219	0.0046	11	c.513 others(28): Show c.513+2764_513+2765insATATATTTTTT	TM2D1	ENSG00000162604.13	transcript	ENST00000606498.5	protein_coding	5/6			chr1	TogoVar
TM4SF1_chr3_149364022_149382649	149378517	G G	GAGAGAGG others(4): Show GAGAGAGGGAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG01123.hp2 HG01943.hp1 others(3): Show HG00741.hp1 HG01123.hp2 HG01943.hp1 HG01952.hp2 HG01993.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	6	431	0.0139	11	c.-97 others(20): Show c.-971_-970insTTTCCCTCTCT	TM4SF1	ENSG00000169908.12	transcript	ENST00000305366.8	protein_coding		869		chr3	TogoVar
TM4SF20_chr2_227357038_227384306	227373927	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0214 a0001c0001t0012g0214	1	36	0.0278	11	c.184 others(28): Show c.184-2958_184-2948dupTTTTTTTTTTT	TM4SF20	ENSG00000168955.4	transcript	ENST00000304568.4	protein_coding	1/3			chr2	TogoVar
TM6SF1_chr15_83102645_83142408	83105411	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	255	0.0039	11	c.-22 others(22): Show c.-2270_-2269insAAAAAAAAAAA	TM6SF1	ENSG00000136404.16	transcript	ENST00000322019.14	protein_coding		2233		chr15	TogoVar
TM6SF2_chr19_19259366_19278301	19273316	C C	CCTGGCAC others(4): Show CCTGGCACAGCA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0008 a0008	a0008c0012 a0008c0012	a0008c0012t0005 a0008c0012t0005	a0008c0012t0005g0203 a0008c0012t0005g0203	1	394	0.0025	11	c.-10 others(20): Show c.-102_-101insTGCTGTGCCAG	TM6SF2	ENSG00000213996.13	transcript	ENST00000389363.5	protein_coding		16		chr19	TogoVar
TM7SF3_chr12_26966579_27019384	26985652	A A	AAATATAT others(4): Show AAATATATATAT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0009 a0003c0003t0009	a0003c0003t0009g0022 a0003c0003t0009g0022	1	318	0.0031	11	c.869 others(28): Show c.869-2794_869-2793insATATATATATT	TM7SF3	ENSG00000064115.11	transcript	ENST00000343028.9	protein_coding	6/11			chr12	TogoVar
TM7SF3_chr12_26966579_27019384	26985652	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0009 a0003c0003t0009	a0003c0003t0009g0236 a0003c0003t0009g0236	1	318	0.0031	11	c.869 others(28): Show c.869-2794_869-2793insATATATATATA	TM7SF3	ENSG00000064115.11	transcript	ENST00000343028.9	protein_coding	6/11			chr12	TogoVar
TM7SF3_chr12_26966579_27019384	26991418	C C	CTGGGATT others(4): Show CTGGGATTACAG	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0370 a0002c0002t0012g0370	1	428	0.0023	11	c.691 others(26): Show c.691-802_691-792dupCTGTAATCCCA	TM7SF3	ENSG00000064115.11	transcript	ENST00000343028.9	protein_coding	5/11			chr12	TogoVar
TM7SF3_chr12_26966579_27019384	27003180	T T	TACCAGAC others(4): Show TACCAGACCCCC	intron_variant intron_variant	MODIFIER	NA19067.hp2 NA19067.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0364 a0002c0002t0005g0364	1	428	0.0023	11	c.246 others(24): Show c.246+45_246+55dupGGGGGTCTGGT	TM7SF3	ENSG00000064115.11	transcript	ENST00000343028.9	protein_coding	2/11			chr12	TogoVar
TM9SF2_chr13_99496472_99569048	99499608	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0274 a0001c0001t0001g0274	1	237	0.0042	11	c.-19 others(22): Show c.-1999_-1998insTTTTTTTTTTT	TM9SF2	ENSG00000125304.10	transcript	ENST00000376387.5	protein_coding		1863		chr13	TogoVar
TM9SF2_chr13_99496472_99569048	99508444	C C	CACACACA others(4): Show CACACACACACA	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	325	0.0031	11	c.171 others(28): Show c.171+6667_171+6668insACACACACACA	TM9SF2	ENSG00000125304.10	transcript	ENST00000376387.5	protein_coding	1/16			chr13	TogoVar
TM9SF3_chr10_96513110_96592012	96543344	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00741.hp2 HG01258.hp2 others(3): Show HG00280.hp2 HG00741.hp2 HG01258.hp2 HG02083.hp2 HG02145.hp1 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0012 a0001c0002t0013 a0001c0001t0001 a0001c0001t0012 a0001c0002t0013	a0001c0001t0001g0135 a0001c0001t0001g0152 a0001c0001t0012g0189 others(3): Show a0001c0001t0001g0135 a0001c0001t0001g0152 a0001c0001t0012g0189 a0001c0001t0012g0190 a0001c0001t0012g0191 a0001c0002t0013g0223	6	7	0.8571	11	c.118 others(28): Show c.1185+731_1185+732insAAAAAAAAAAA	TM9SF3	ENSG00000077147.16	transcript	ENST00000371142.9	protein_coding	9/14			chr10	TogoVar
TM9SF4_chr20_32104714_32172256	32123199	G G	GGGGGAGG others(4): Show GGGGGAGGGGGA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03098.hp2 HG03225.hp1 others(1): Show HG02895.hp1 HG03098.hp2 HG03225.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0184 a0001c0002t0004g0185 a0001c0002t0004g0186 others(1): Show a0001c0002t0004g0184 a0001c0002t0004g0185 a0001c0002t0004g0186 a0001c0002t0004g0187	4	246	0.0163	11	c.16- others(26): Show c.16-9810_16-9809insAGGGGGAGGGG	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32123866	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18940.hp1 NA18946.hp2 others(13): Show NA18747.hp2 NA18940.hp1 NA18946.hp2 NA18949.hp1 NA18960.hp2 NA18962.hp1 NA18967.hp2 NA18975.hp1 NA18979.hp1 NA19010.hp2 NA19011.hp2 NA19077.hp1 NA19079.hp2 NA19083.hp2 NA19084.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0210 others(13): Show a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0216 a0001c0001t0001g0218 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0245	16	66	0.2424	11	c.16- others(26): Show c.16-9146_16-9145insATATATATATT	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32123866	A A	ATATATAT others(4): Show ATATATATATTT	intron_variant intron_variant	MODIFIER	HG02165.hp1 NA18947.hp1 NA18957.hp1 others(7): Show HG02165.hp1 NA18947.hp1 NA18957.hp1 NA18980.hp1 NA18985.hp2 NA18998.hp2 NA19000.hp1 NA19054.hp2 NA19063.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0201 a0001c0001t0001g0214 a0001c0001t0001g0217 others(7): Show a0001c0001t0001g0201 a0001c0001t0001g0214 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0228 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0237	10	60	0.1667	11	c.16- others(26): Show c.16-9146_16-9145insATATATATTTT	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32123867	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0244 a0001c0001t0001g0244	1	288	0.0035	11	c.16- others(26): Show c.16-9146_16-9145insATATATATATA	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	1/17			chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32126068	A A	ACACACAC others(4): Show ACACACACACAC	intron_variant intron_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0123 a0001c0001t0001g0123	1	86	0.0116	11	c.16- others(26): Show c.16-6945_16-6944insCACACACACAC	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	1/17			chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32156942	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01169.hp2 HG01261.hp2 others(33): Show HG00738.hp2 HG01169.hp2 HG01261.hp2 HG01884.hp1 HG01978.hp2 HG02135.hp2 HG02451.hp1 HG02486.hp2 HG02615.hp2 HG02630.hp1 HG02738.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03130.hp2 HG03195.hp2 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03579.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18950.hp1 NA18968.hp1 NA18980.hp2 NA19043.hp1 NA19063.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0002c0006	a0001c0001t0001 a0001c0002t0004 a0001c0003t0009 others(2): Show a0001c0001t0001 a0001c0002t0004 a0001c0003t0009 a0001c0005t0004 a0002c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0010 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0057 a0001c0001t0001g0178 a0001c0002t0004g0185 a0001c0002t0004g0186 a0001c0002t0004g0188 a0001c0003t0009g0287 a0001c0003t0009g0288 a0001c0005t0004g0056 a0002c0006t0001g0028	36	147	0.2449	11	c.133 others(28): Show c.1330-847_1330-837dupTTTTTTTTTTT	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
TM9SF4_chr20_32104714_32172256	32163268	A A	AAAAATAT others(4): Show AAAAATATATAT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03041.hp1 HG02818.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0041 a0001c0001t0010g0024 a0001c0001t0001g0041 a0001c0001t0010g0024	2	234	0.0085	11	c.177 others(30): Show c.1779+1904_1779+1905insAAATATATATA	TM9SF4	ENSG00000101337.16	transcript	ENST00000398022.7	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
TMBIM1_chr2_218269197_218297503	218294585	C C	CCCCCCCC others(4): Show CCCCCCCCCAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0001 a0002c0001t0001g0001	1	354	0.0028	11	c.-21 others(22): Show c.-2161_-2160insATTGGGGGGGG	TMBIM1	ENSG00000135926.15	transcript	ENST00000258412.8	protein_coding		2083		chr2	TogoVar

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