Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCSER1_chr4_90122394_91610295	90574251	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0009 a0002c0002t0018g0009	1	38	0.0263	11	c.172 others(32): Show c.1725-53756_1725-53746dupTTTTTTTTTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90611059	C C	CTTTTCTT others(4): Show CTTTTCTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0003 a0001c0001t0011g0003	1	38	0.0263	11	c.172 others(32): Show c.1725-16962_1725-16961insCTTTTTTTTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90611059	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0012 a0005c0007t0012	a0005c0007t0012g0010 a0005c0007t0012g0010	1	38	0.0263	11	c.172 others(32): Show c.1725-16956_1725-16946dupTTTTTTTTTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90898269	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03209.hp2 NA19240.hp1 HG02109.hp1 HG03209.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0013 a0001c0001t0003 a0001c0001t0007 a0001c0001t0013	a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0013g0035 a0001c0001t0003g0034 a0001c0001t0007g0036 a0001c0001t0013g0035	3	38	0.0790	11	c.209 others(32): Show c.2095-25081_2095-25071dupTTTTTTTTTTT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91496696	C C	CAATATAT others(4): Show CAATATATATTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02258.hp1 HG03239.hp1 others(2): Show HG02109.hp2 HG02258.hp1 HG03239.hp1 HG03239.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0006 a0001c0003t0002 a0001c0001t0001 a0001c0001t0006 a0001c0003t0002	a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0024 a0001c0001t0001g0032 a0001c0001t0006g0023 a0001c0003t0002g0026	5	38	0.1316	11	c.221 others(34): Show c.2218-101867_2218-101866insTGAATATATAT	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER2_chr10_84323589_84523517	84332436	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0028	1	370	0.0027	11	c.-40 others(28): Show c.-40+3629_-40+3630insATATATATATT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84332436	A A	ATATATAT others(4): Show ATATATATATTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02896.hp2 HG02922.hp2 HG02622.hp2 HG02896.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036	3	370	0.0081	11	c.-40 others(28): Show c.-40+3629_-40+3630insATATATATTTT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84332436	A A	ATATATAT others(4): Show ATATATATTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0038 a0001c0001t0002g0038	1	370	0.0027	11	c.-40 others(28): Show c.-40+3629_-40+3630insATATATTTTTT	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCSER2_chr10_84323589_84523517	84436325	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19240.hp1 NA20300.hp2 NA19043.hp1 NA19240.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0057 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0057	3	370	0.0081	11	c.186 others(30): Show c.1869-2169_1869-2159dupAAAAAAAAAAA	CCSER2	ENSG00000107771.17	transcript	ENST00000372088.8	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCT2_chr12_69580459_69606570	69580494	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp2 HG01358.hp2 HG01496.hp1 others(3): Show HG00673.hp2 HG01358.hp2 HG01496.hp1 HG01943.hp1 HG01978.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0004 a0001c0002t0002g0006 a0001c0002t0002g0015 others(1): Show a0001c0001t0001g0004 a0001c0002t0002g0006 a0001c0002t0002g0015 a0001c0002t0002g0051	6	410	0.0146	11	c.-50 others(22): Show c.-5028_-5027insTTTTTTTTTTT	CCT2	ENSG00000166226.13	transcript	ENST00000299300.11	protein_coding		4964		chr12	TogoVar
CCT5_chr5_10245280_10271389	10249897	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0107 a0001c0001t0002g0107	1	374	0.0027	11	c.-44 others(20): Show c.-444_-443insAAAAAAAAAAA	CCT5	ENSG00000150753.12	transcript	ENST00000280326.9	protein_coding		382		chr5	TogoVar
CCT6B_chr17_34922861_34966460	34949109	A A	AAGAAAAG others(4): Show AAGAAAAGAGAG	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0002 a0005c0006t0002	a0005c0006t0002g0166 a0005c0006t0002g0166	1	402	0.0025	11	c.614 others(28): Show c.614+2840_614+2841insCTCTCTTTTCT	CCT6B	ENSG00000132141.14	transcript	ENST00000314144.10	protein_coding	5/13			chr17	TogoVar
CCZ1B_chr7_6793937_6831275	6795039	G G	GGCAGGAT others(4): Show GGCAGGATGACT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00735.hp1 others(83): Show HG00323.hp2 HG00408.hp2 HG00735.hp1 HG00741.hp2 HG01099.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01928.hp2 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02071.hp2 HG02083.hp2 HG02135.hp1 HG02148.hp2 HG02293.hp1 HG02300.hp2 HG02523.hp1 HG02735.hp2 HG02922.hp1 HG03139.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03492.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp2 HG04228.hp2 NA18747.hp2 NA18941.hp1 NA18943.hp2 NA18945.hp1 NA18947.hp2 NA18949.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp2 NA18957.hp2 NA18961.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18980.hp1 NA18984.hp1 NA18991.hp2 NA18994.hp2 NA18997.hp2 NA18999.hp2 NA19002.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19043.hp1 NA19055.hp1 NA19062.hp2 NA19068.hp2 NA19070.hp1 NA19075.hp2 NA19076.hp1 NA19080.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp2 NA19091.hp1 NA20752.hp1 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0005 a0002c0003 a0003c0004 others(2): Show a0001c0005 a0002c0003 a0003c0004 a0003c0006 a0004c0012	a0001c0005t0002 a0001c0005t0006 a0002c0003t0003 others(5): Show a0001c0005t0002 a0001c0005t0006 a0002c0003t0003 a0002c0003t0005 a0003c0004t0003 a0003c0004t0011 a0003c0006t0003 a0004c0012t0003	a0001c0005t0002g0205 a0001c0005t0002g0211 a0001c0005t0002g0226 others(74): Show a0001c0005t0002g0205 a0001c0005t0002g0211 a0001c0005t0002g0226 a0001c0005t0006g0187 a0002c0003t0003g0003 a0002c0003t0003g0021 a0002c0003t0003g0023 a0002c0003t0003g0103 a0002c0003t0003g0104 a0002c0003t0003g0105 a0002c0003t0003g0106 a0002c0003t0003g0107 a0002c0003t0003g0110 a0002c0003t0003g0111 a0002c0003t0003g0112 a0002c0003t0003g0114 a0002c0003t0003g0115 a0002c0003t0003g0116 a0002c0003t0003g0117 a0002c0003t0003g0118 a0002c0003t0003g0119 a0002c0003t0003g0120 a0002c0003t0003g0121 a0002c0003t0003g0122 a0002c0003t0003g0123 a0002c0003t0003g0124 a0002c0003t0003g0125 a0002c0003t0003g0127 a0002c0003t0003g0128 a0002c0003t0003g0129 a0002c0003t0003g0130 a0002c0003t0003g0131 a0002c0003t0003g0132 a0002c0003t0003g0133 a0002c0003t0003g0135 a0002c0003t0003g0136 a0002c0003t0003g0137 a0002c0003t0003g0140 a0002c0003t0003g0145 a0002c0003t0003g0146 a0002c0003t0003g0147 a0002c0003t0003g0148 a0002c0003t0003g0149 a0002c0003t0003g0150 a0002c0003t0003g0151 a0002c0003t0003g0152 a0002c0003t0003g0153 a0002c0003t0003g0154 a0002c0003t0003g0156 a0002c0003t0003g0157 a0002c0003t0003g0160 a0002c0003t0003g0161 a0002c0003t0003g0162 a0002c0003t0003g0163 a0002c0003t0003g0164 a0002c0003t0003g0166 a0002c0003t0003g0167 a0002c0003t0003g0171 a0002c0003t0003g0172 a0002c0003t0003g0173 a0002c0003t0003g0177 a0002c0003t0003g0178 a0002c0003t0005g0004 a0002c0003t0005g0022 a0002c0003t0005g0138 a0002c0003t0005g0141 a0002c0003t0005g0142 a0002c0003t0005g0143 a0002c0003t0005g0144 a0002c0003t0005g0158 a0002c0003t0005g0174 a0002c0003t0005g0175 a0003c0004t0003g0092 a0003c0004t0011g0108 a0003c0006t0003g0101 a0003c0006t0003g0102 a0004c0012t0003g0134	86	354	0.2429	11	c.41 others(22): Show c.4174_*4184dupAGTCATCCTGC	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		3897		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6804424	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG02040.hp2 HG04228.hp2 others(5): Show HG00597.hp2 HG02040.hp2 HG04228.hp2 NA18945.hp2 NA18954.hp1 NA18992.hp1 NA19010.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0005t0006 a0001c0001t0002 a0001c0005t0006	a0001c0001t0002g0246 a0001c0001t0002g0251 a0001c0001t0002g0261 others(5): Show a0001c0001t0002g0246 a0001c0001t0002g0251 a0001c0001t0002g0261 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0005t0006g0187	8	354	0.0226	11	c.110 others(28): Show c.1106+513_1106+514insTTTTTTTTTTT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	12/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6805940	T T	TTCAAAGG others(4): Show TTCAAAGGAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0184 a0001c0001t0004g0184	1	354	0.0028	11	c.988 others(24): Show c.988+63_988+64insTTTTCCTTTGA	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	11/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6825639	A A	ACACACAC others(4): Show ACACACACACAC	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0006	a0001c0005t0006g0187 a0001c0005t0006g0187	1	354	0.0028	11	c.120 others(26): Show c.120+438_120+439insGTGTGTGTGTG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	1/14			chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6827388	G G	GCCCCCCC others(4): Show GCCCCCCCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp2 HG02976.hp2 HG02922.hp2 HG02976.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0006 a0003c0004t0006g0032 a0003c0004t0006g0006 a0003c0004t0006g0032	2	354	0.0057	11	c.-11 others(22): Show c.-1192_-1191insGGGGGGGGGGG	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		1114		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6828278	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19012.hp1 NA19055.hp2 NA19012.hp1 NA19055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0260 a0001c0001t0002g0283 a0001c0001t0002g0260 a0001c0001t0002g0283	2	354	0.0057	11	c.-20 others(22): Show c.-2082_-2081insTTTTTTTTTTT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		2004		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830651	T T	TATATATA others(4): Show TATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0006 a0005c0008t0006	a0005c0008t0006g0168 a0005c0008t0006g0168	1	354	0.0028	11	c.-44 others(22): Show c.-4455_-4454insTATATATATAT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4377		chr7	TogoVar
CCZ1B_chr7_6793937_6831275	6830676	T T	TATATATA others(4): Show TATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0166 a0002c0003t0003g0166	1	354	0.0028	11	c.-44 others(22): Show c.-4480_-4479insTATATATATAT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding		4402		chr7	TogoVar
CCZ1_chr7_5893733_5931550	5920470	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02145.hp2 NA18906.hp2 HG01109.hp1 HG02145.hp2 NA18906.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0045 a0003c0003t0003g0082 a0003c0003t0003g0083 a0003c0003t0003g0045 a0003c0003t0003g0082 a0003c0003t0003g0083	3	114	0.0263	11	c.110 others(28): Show c.1106+511_1106+521dupTTTTTTTTTTT	CCZ1	ENSG00000122674.12	transcript	ENST00000325974.9	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CCZ1_chr7_5893733_5931550	5927026	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0053 a0001c0001t0021g0053	1	114	0.0088	11	c.13 others(22): Show c.1339_*1340insGTGTGTGTGTG	CCZ1	ENSG00000122674.12	transcript	ENST00000325974.9	protein_coding		477		chr7	TogoVar
CCZ1_chr7_5893733_5931550	5929905	A A	AGCAGTCA others(4): Show AGCAGTCATCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01071.hp2 HG01081.hp1 HG01192.hp1 others(5): Show HG01071.hp2 HG01081.hp1 HG01192.hp1 HG01361.hp1 HG01978.hp1 HG02080.hp1 HG03453.hp1 HG03486.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0005 others(2): Show a0001c0001 a0001c0004 a0001c0005 a0001c0006 a0003c0003	a0001c0001t0020 a0001c0004t0008 a0001c0005t0006 others(3): Show a0001c0001t0020 a0001c0004t0008 a0001c0005t0006 a0001c0005t0017 a0001c0006t0018 a0003c0003t0003	a0001c0001t0020g0051 a0001c0004t0008g0106 a0001c0005t0006g0107 others(5): Show a0001c0001t0020g0051 a0001c0004t0008g0106 a0001c0005t0006g0107 a0001c0005t0006g0109 a0001c0005t0006g0110 a0001c0005t0017g0108 a0001c0006t0018g0113 a0003c0003t0003g0099	8	114	0.0702	11	c.42 others(22): Show c.4218_*4219insGCAGTCATCCT	CCZ1	ENSG00000122674.12	transcript	ENST00000325974.9	protein_coding		3356		chr7	TogoVar
CD101_chr1_116996760_117041552	117028107	A A	AAATAAAT others(4): Show AAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01891.hp1 HG02717.hp1 others(1): Show HG01361.hp1 HG01891.hp1 HG02717.hp1 HG03098.hp2	a0002 a0005 a0006 a0002 a0005 a0006	a0002c0004 a0005c0007 a0006c0021 a0002c0004 a0005c0007 a0006c0021	a0002c0004t0001 a0005c0007t0001 a0006c0021t0001 a0002c0004t0001 a0005c0007t0001 a0006c0021t0001	a0002c0004t0001g0253 a0005c0007t0001g0373 a0005c0007t0001g0374 others(1): Show a0002c0004t0001g0253 a0005c0007t0001g0373 a0005c0007t0001g0374 a0006c0021t0001g0102	4	426	0.0094	11	c.282 others(30): Show c.2824+2205_2824+2206insTAAATAAATAA	CD101	ENSG00000134256.13	transcript	ENST00000682167.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD101_chr1_116996760_117041552	117029194	A A	AGAAAGAA others(4): Show AGAAAGAAGAAG	intron_variant intron_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0001 a0004c0006t0001	a0004c0006t0001g0298 a0004c0006t0001g0298	1	426	0.0024	11	c.282 others(30): Show c.2824+3297_2824+3298insGAAGGAAAGAA	CD101	ENSG00000134256.13	transcript	ENST00000682167.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD101_chr1_116996760_117041552	117029204	A A	AAAGAAAG others(4): Show AAAGAAAGAAGG	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA19009.hp2 NA18949.hp2 NA19009.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0003c0005 a0001c0003 a0003c0005	a0001c0003t0001 a0003c0005t0001 a0001c0003t0001 a0003c0005t0001	a0001c0003t0001g0178 a0003c0005t0001g0322 a0001c0003t0001g0178 a0003c0005t0001g0322	2	426	0.0047	11	c.282 others(30): Show c.2824+3302_2824+3303insGAAAGAAGGAA	CD101	ENSG00000134256.13	transcript	ENST00000682167.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD101_chr1_116996760_117041552	117029204	A A	AAGGAAAG others(4): Show AAGGAAAGAAGG	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0143 a0001c0003t0001g0143	1	426	0.0024	11	c.282 others(30): Show c.2824+3301_2824+3302insGGAAAGAAGGA	CD101	ENSG00000134256.13	transcript	ENST00000682167.1	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD109_chr6_73691203_73833313	73711534	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01952.hp2 HG01975.hp1 others(3): Show HG01261.hp2 HG01952.hp2 HG01975.hp1 HG02148.hp2 NA18974.hp1 NA18993.hp1	a0002 a0003 a0021 a0002 a0003 a0021	a0002c0002 a0003c0010 a0021c0031 a0002c0002 a0003c0010 a0021c0031	a0002c0002t0002 a0003c0010t0001 a0003c0010t0012 others(2): Show a0002c0002t0002 a0003c0010t0001 a0003c0010t0012 a0003c0010t0031 a0021c0031t0002	a0002c0002t0002g0083 a0002c0002t0002g0114 a0003c0010t0001g0132 others(3): Show a0002c0002t0002g0083 a0002c0002t0002g0114 a0003c0010t0001g0132 a0003c0010t0012g0113 a0003c0010t0031g0066 a0021c0031t0002g0172	6	362	0.0166	11	c.248 others(30): Show c.248-11710_248-11700dupTTTTTTTTTTT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	2/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD109_chr6_73691203_73833313	73725504	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01981.hp2 HG02165.hp1 others(7): Show HG00558.hp2 HG01981.hp2 HG02165.hp1 HG02965.hp2 NA18941.hp2 NA18945.hp1 NA18949.hp2 NA18984.hp2 NA19012.hp2 NA19058.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0003c0008 a0005c0006 a0001c0001 a0003c0008 a0005c0006	a0001c0001t0005 a0003c0008t0003 a0005c0006t0004 a0001c0001t0005 a0003c0008t0003 a0005c0006t0004	a0001c0001t0005g0005 a0001c0001t0005g0013 a0001c0001t0005g0018 others(7): Show a0001c0001t0005g0005 a0001c0001t0005g0013 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0023 a0003c0008t0003g0016 a0003c0008t0003g0017 a0003c0008t0003g0027 a0003c0008t0003g0150 a0005c0006t0004g0014	10	362	0.0276	11	c.276 others(28): Show c.276+2236_276+2246dupTTTTTTTTTTT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	3/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD109_chr6_73691203_73833313	73802305	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02015.hp1 NA18998.hp1 HG02015.hp1 NA18998.hp1	a0004 a0007 a0004 a0007	a0004c0005 a0007c0009 a0004c0005 a0007c0009	a0004c0005t0008 a0007c0009t0002 a0004c0005t0008 a0007c0009t0002	a0004c0005t0008g0341 a0007c0009t0002g0345 a0004c0005t0008g0341 a0007c0009t0002g0345	2	362	0.0055	11	c.287 others(28): Show c.2879-914_2879-913insATATATATATT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	23/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD109_chr6_73691203_73833313	73802305	A A	ATATATTT others(4): Show ATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02818.hp1 NA19240.hp2 HG02109.hp2 HG02818.hp1 NA19240.hp2	a0013 a0019 a0013 a0019	a0013c0018 a0019c0032 a0013c0018 a0019c0032	a0013c0018t0004 a0019c0032t0016 a0013c0018t0004 a0019c0032t0016	a0013c0018t0004g0326 a0013c0018t0004g0329 a0019c0032t0016g0241 a0013c0018t0004g0326 a0013c0018t0004g0329 a0019c0032t0016g0241	3	362	0.0083	11	c.287 others(28): Show c.2879-914_2879-913insATATTTTTTTT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	23/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD109_chr6_73691203_73833313	73802306	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0038 a0004c0005t0038	a0004c0005t0038g0201 a0004c0005t0038g0201	1	362	0.0028	11	c.287 others(28): Show c.2879-914_2879-913insATATATATATA	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	23/32			chr6	TogoVar
CD14_chr5_140626732_140638175	140631631	T T	TAGGATGA others(4): Show TAGGATGAAGAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18997.hp1 NA18997.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	11	c.22 others(20): Show c.224_*225insTTCTTCATCCT	CD14	ENSG00000170458.15	transcript	ENST00000302014.11	protein_coding		100		chr5	TogoVar
CD163L1_chr12_7349960_7449153	7437247	G G	GTATTTAA others(4): Show GTATTTAAATAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0003 a0003	a0003c0033 a0003c0033	a0003c0033t0002 a0003c0033t0002	a0003c0033t0002g0123 a0003c0033t0002g0123	1	384	0.0026	11	c.125 others(28): Show c.125-3554_125-3553insGTATTTAAATA	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	2/19			chr12	TogoVar
CD19_chr16_28926971_28944342	28929934	A A	AGAGAGAG others(4): Show AGAGAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19088.hp1 NA20905.hp2 NA19088.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0002g0003 a0001c0001t0001g0001 a0001c0001t0002g0003	2	400	0.0050	11	c.-20 others(22): Show c.-2067_-2066insGAGAGAGAGAG	CD19	ENSG00000177455.15	transcript	ENST00000538922.8	protein_coding		2036		chr16	TogoVar
CD1A_chr1_158249424_158263269	158254031	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 NA18952.hp1 HG00408.hp2 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0006 a0001c0001t0001g0009	2	446	0.0045	11	c.-63 others(20): Show c.-639_-638insTTTTTTTTTTT	CD1A	ENSG00000158477.7	transcript	ENST00000289429.6	protein_coding		392		chr1	TogoVar
CD200_chr3_112328156_112367812	112360326	T T	TAAAAATA others(4): Show TAAAAATAAAAA	intron_variant intron_variant	MODIFIER	HG02486.hp2 NA20805.hp2 HG02486.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0205 a0001c0001t0001g0207	2	408	0.0049	11	c.803 others(28): Show c.803-1212_803-1211insTAAAAAAAAAA	CD200	ENSG00000091972.18	transcript	ENST00000315711.12	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
CD226_chr18_69848274_69952873	69851192	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0040 a0002c0002t0040	a0002c0002t0040g0171 a0002c0002t0040g0171	1	256	0.0039	11	c.13 others(24): Show c.13111_*13121dupAAAAAAAAAAA	CD226	ENSG00000150637.9	transcript	ENST00000582621.6	protein_coding		2081		chr18	TogoVar
CD244_chr1_160825160_160867887	160828903	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG01099.hp2 HG02109.hp1 others(11): Show HG00408.hp2 HG01099.hp2 HG02109.hp1 HG02129.hp1 HG02723.hp2 HG02818.hp1 HG03654.hp1 HG03942.hp1 NA18940.hp2 NA18968.hp2 NA18978.hp2 NA18979.hp1 NA18998.hp1 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0018 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0018 a0002c0002t0006	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0051 a0001c0001t0001g0078 a0001c0001t0001g0109 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0004g0039 a0001c0001t0004g0206 a0001c0001t0018g0093 a0002c0002t0006g0242	14	404	0.0347	11	c.24 others(22): Show c.2443_*2444insCTTTCTTTCTT	CD244	ENSG00000122223.13	transcript	ENST00000368034.9	protein_coding		1256		chr1	TogoVar
CD244_chr1_160825160_160867887	160864980	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp2 HG03927.hp2 HG03942.hp2 HG02602.hp2 HG03927.hp2 HG03942.hp2	a0002 a0006 a0002 a0006	a0002c0002 a0006c0015 a0002c0002 a0006c0015	a0002c0002t0004 a0006c0015t0028 a0002c0002t0004 a0006c0015t0028	a0002c0002t0004g0234 a0002c0002t0004g0235 a0006c0015t0028g0131 a0002c0002t0004g0234 a0002c0002t0004g0235 a0006c0015t0028g0131	3	404	0.0074	11	c.-23 others(22): Show c.-2304_-2303insTTTTTTTTTTT	CD244	ENSG00000122223.13	transcript	ENST00000368034.9	protein_coding		2094		chr1	TogoVar
CD247_chr1_167425640_167523529	167453014	T T	TATATATT others(4): Show TATATATTATAG	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0295 a0001c0001t0002g0295	1	374	0.0027	11	c.59- others(28): Show c.59-12248_59-12247insCTATAATATAT	CD247	ENSG00000198821.12	transcript	ENST00000362089.10	protein_coding	1/7			chr1	TogoVar
CD247_chr1_167425640_167523529	167453037	A A	ATAGATAT others(4): Show ATAGATATATAT	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0295 a0001c0001t0002g0295	1	374	0.0027	11	c.59- others(28): Show c.59-12271_59-12270insATATATATCTA	CD247	ENSG00000198821.12	transcript	ENST00000362089.10	protein_coding	1/7			chr1	TogoVar
CD24_chr6_106964831_106979729	106967469	A A	AAGAATGT others(4): Show AAGAATGTTTCC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	462	0.0022	11	c.41 others(22): Show c.4191_*4192insGGAAACATTCT	CD24	ENSG00000272398.6	transcript	ENST00000606017.2	protein_coding		2361		chr6	TogoVar
CD24_chr6_106964831_106979729	106975355	G G	GGCCGGAC others(4): Show GGCCGGACGCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG06807.hp2 HG02622.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0023 a0001c0001t0011g0023	2	462	0.0043	11	c.-72 others(20): Show c.-720_-710dupGAGCGTCCGGC	CD24	ENSG00000272398.6	transcript	ENST00000606017.2	protein_coding		627		chr6	TogoVar
CD276_chr15_73679383_73719514	73684191	C C	CGGGGCGG others(4): Show CGGGGCGGGGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0067 a0003c0003t0003g0067	1	384	0.0026	11	c.-32 others(20): Show c.-324_-323insGGGGCGGGGCG	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		191		chr15	TogoVar
CD276_chr15_73679383_73719514	73718274	A A	AATTTTTT others(4): Show AATTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0098 a0001c0001t0002g0098	1	384	0.0026	11	c.53 others(22): Show c.5318_*5319insATTTTTTTTTT	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3761		chr15	TogoVar
CD276_chr15_73679383_73719514	73718280	A A	ATATATAT others(4): Show ATATATATATTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	384	0.0026	11	c.53 others(22): Show c.5324_*5325insTATATATATTT	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3767		chr15	TogoVar
CD276_chr15_73679383_73719514	73718280	A A	ATATATAT others(4): Show ATATATATTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0143 a0001c0001t0001g0143	1	384	0.0026	11	c.53 others(22): Show c.5324_*5325insTATATATTTTT	CD276	ENSG00000103855.18	transcript	ENST00000318443.10	protein_coding		3767		chr15	TogoVar
CD2AP_chr6_47472789_47632263	47517183	T T	TTCTTCTT others(4): Show TTCTTCTTCTGC	intron_variant intron_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0151 a0001c0001t0014g0151	1	322	0.0031	11	c.165 others(30): Show c.165+13744_165+13754dupTCTTCTTCTGC	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47610971	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18949.hp1 NA18949.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0105 a0001c0001t0004g0105	1	322	0.0031	11	c.181 others(30): Show c.1815-1501_1815-1500insATATATATATT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr6	TogoVar

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