Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHUK_chr10_100183300_100234596	100210091	A A	ATTTATTT others(4): Show ATTTATTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	402	0.0025	11	c.934 others(26): Show c.934-303_934-302insAAAAAAATAAA	CHUK	ENSG00000213341.11	transcript	ENST00000370397.8	protein_coding	9/20			chr10	TogoVar
CHURC1_chr14_64909455_64940368	64923273	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02896.hp2 NA18522.hp1 HG02896.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0025 a0001c0001t0003 a0001c0001t0025	a0001c0001t0003g0068 a0001c0001t0025g0205 a0001c0001t0003g0068 a0001c0001t0025g0205	2	392	0.0051	11	c.40- others(24): Show c.40-714_40-704dupAAAAAAAAAAA	CHURC1	ENSG00000258289.10	transcript	ENST00000549115.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr14	TogoVar
CIAO2A_chr15_64067565_64098838	64078639	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02257.hp1 HG02280.hp2 others(3): Show HG01109.hp1 HG02257.hp1 HG02280.hp2 HG02572.hp1 HG02886.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 others(3): Show a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0193 a0001c0002t0001g0049	6	338	0.0178	11	c.339 others(28): Show c.339+2452_339+2462dupTTTTTTTTTTT	CIAO2A	ENSG00000166797.11	transcript	ENST00000300030.8	protein_coding	3/4			chr15	TogoVar
CIB2_chr15_78099606_78136445	78117246	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG03209.hp2 HG01257.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0240 a0001c0001t0007g0154 a0001c0001t0001g0240 a0001c0001t0007g0154	2	390	0.0051	11	c.87- others(26): Show c.87-5981_87-5971dupTTTTTTTTTTT	CIB2	ENSG00000136425.14	transcript	ENST00000258930.8	protein_coding	2/5			chr15	TogoVar
CIB3_chr19_16156368_16178525	16159722	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	378	0.0027	11	c.17 others(22): Show c.1742_*1743insTTTTTTTTTTT	CIB3	ENSG00000141977.9	transcript	ENST00000269878.8	protein_coding		1645		chr19	TogoVar
CIB4_chr2_26576205_26646366	26601231	A A	AAAAAAAA others(4): Show AAAAAAAAATAT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0070 a0002c0002t0002g0070	1	344	0.0029	11	c.187 others(28): Show c.187-5915_187-5914insATATTTTTTTT	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	3/6			chr2	TogoVar
CIB4_chr2_26576205_26646366	26601231	A A	AAAAATAT others(4): Show AAAAATATATAT	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0063 a0002c0002t0003g0063	1	344	0.0029	11	c.187 others(28): Show c.187-5915_187-5914insATATATATTTT	CIB4	ENSG00000157884.11	transcript	ENST00000288861.5	protein_coding	3/6			chr2	TogoVar
CIITA_chr16_10872202_10941394	10872896	G G	GGCACTTG others(4): Show GGCACTTGAACT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0043 a0002c0002t0043	a0002c0002t0043g0002 a0002c0002t0043g0002	1	392	0.0026	11	c.-44 others(22): Show c.-4435_-4434insGCACTTGAACT	CIITA	ENSG00000179583.21	transcript	ENST00000324288.14	protein_coding		4305		chr16	TogoVar
CIITA_chr16_10872202_10941394	10893804	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01978.hp2 NA18966.hp1 HG01978.hp2 NA18966.hp1	a0001 a0004 a0001 a0004	a0001c0005 a0004c0004 a0001c0005 a0004c0004	a0001c0005t0003 a0004c0004t0009 a0001c0005t0003 a0004c0004t0009	a0001c0005t0003g0282 a0004c0004t0009g0154 a0001c0005t0003g0282 a0004c0004t0009g0154	2	392	0.0051	11	c.53- others(26): Show c.53-1458_53-1448dupAAAAAAAAAAA	CIITA	ENSG00000179583.21	transcript	ENST00000324288.14	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr16	TogoVar
CILK1_chr6_52996303_53066824	53064212	A A	AGACTTCA others(4): Show AGACTTCAATGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0143 a0001c0002t0002g0143	1	244	0.0041	11	c.-27 others(22): Show c.-2790_-2789insCCATTGAAGTC	CILK1	ENSG00000112144.16	transcript	ENST00000676107.1	protein_coding		2389		chr6	TogoVar
CILP_chr15_65189760_65216473	65191680	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03579.hp1 NA19010.hp1 HG03579.hp1 NA19010.hp1	a0003 a0009 a0003 a0009	a0003c0003 a0009c0012 a0003c0003 a0009c0012	a0003c0003t0003 a0009c0012t0001 a0003c0003t0003 a0009c0012t0001	a0003c0003t0003g0097 a0009c0012t0001g0149 a0003c0003t0003g0097 a0009c0012t0001g0149	2	332	0.0060	11	c.50 others(22): Show c.5050_*5051insAAAAAAAAAAA	CILP	ENSG00000138615.6	transcript	ENST00000261883.6	protein_coding		3079		chr15	TogoVar
CIP2A_chr3_108544864_108594438	108553894	T T	TACAAAAA others(4): Show TACAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	372	0.0027	11	c.232 others(28): Show c.2325-165_2325-164insTTTTTTTTTGT	CIP2A	ENSG00000163507.15	transcript	ENST00000295746.13	protein_coding	18/20			chr3	TogoVar
CISD1_chr10_58264162_58294586	58271043	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02895.hp2 HG03516.hp2 HG02717.hp2 HG02895.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0114 a0001c0001t0006g0115 a0001c0001t0006g0116 a0001c0001t0002g0114 a0001c0001t0006g0115 a0001c0001t0006g0116	3	386	0.0078	11	c.31+ others(26): Show c.31+1743_31+1753dupTTTTTTTTTTT	CISD1	ENSG00000122873.12	transcript	ENST00000333926.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
CISD2_chr4_102863992_102897807	102864185	T T	TAATAGTA others(4): Show TAATAGTAGATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0011 a0001c0001t0002g0011	1	354	0.0028	11	c.-49 others(22): Show c.-4900_-4899insAATAGTAGATA	CISD2	ENSG00000145354.12	transcript	ENST00000273986.10	protein_coding		4806		chr4	TogoVar
CISD2_chr4_102863992_102897807	102890840	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02818.hp2 HG02897.hp1 others(1): Show HG02486.hp2 HG02818.hp2 HG02897.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0036 a0001c0001t0048 others(1): Show a0001c0001t0033 a0001c0001t0036 a0001c0001t0048 a0001c0001t0053	a0001c0001t0033g0011 a0001c0001t0036g0072 a0001c0001t0048g0017 others(1): Show a0001c0001t0033g0011 a0001c0001t0036g0072 a0001c0001t0048g0017 a0001c0001t0053g0017	4	354	0.0113	11	c.34 others(22): Show c.3413_*3423dupAAAAAAAAAAA	CISD2	ENSG00000145354.12	transcript	ENST00000273986.10	protein_coding	3/3	3424	INFO_REALIGN_3_PRIME	chr4	TogoVar
CIT_chr12_119680791_119882320	119716378	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG03579.hp2 HG02895.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0030 a0001c0001 a0001c0030	a0001c0001t0005 a0001c0030t0005 a0001c0001t0005 a0001c0030t0005	a0001c0001t0005g0020 a0001c0030t0005g0032 a0001c0001t0005g0020 a0001c0030t0005g0032	2	236	0.0085	11	c.416 others(30): Show c.4168+1856_4168+1866dupTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	32/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119745374	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG02451.hp1 HG02630.hp2 others(4): Show HG01258.hp2 HG02451.hp1 HG02630.hp2 HG03225.hp1 HG03239.hp2 HG03688.hp2 NA18955.hp1	a0001 a0001	a0001c0003 a0001c0025 a0001c0003 a0001c0025	a0001c0003t0003 a0001c0003t0005 a0001c0025t0003 a0001c0003t0003 a0001c0003t0005 a0001c0025t0003	a0001c0003t0003g0037 a0001c0003t0003g0040 a0001c0003t0003g0128 others(4): Show a0001c0003t0003g0037 a0001c0003t0003g0040 a0001c0003t0003g0128 a0001c0003t0003g0183 a0001c0003t0005g0186 a0001c0003t0005g0190 a0001c0025t0003g0064	7	236	0.0297	11	c.290 others(30): Show c.2905-2921_2905-2911dupTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	23/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119853438	G G	GTTTTGTT others(4): Show GTTTTGTTTTGT	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02015.hp2 HG02027.hp1 others(15): Show HG00597.hp1 HG02015.hp2 HG02027.hp1 HG02080.hp1 HG02083.hp2 HG02717.hp2 HG02922.hp1 HG03017.hp1 HG03453.hp2 HG03492.hp1 HG03579.hp2 HG06807.hp1 NA18973.hp2 NA18983.hp2 NA18993.hp2 NA19006.hp1 NA19030.hp1 NA19060.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0007 others(3): Show a0001c0001 a0001c0005 a0001c0007 a0001c0028 a0001c0031 a0002c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0021 a0001c0005t0008 a0001c0007t0005 a0001c0028t0003 a0001c0031t0004 a0002c0004t0011	a0001c0001t0001g0100 a0001c0001t0001g0172 a0001c0001t0001g0174 others(15): Show a0001c0001t0001g0100 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0004g0161 a0001c0001t0004g0163 a0001c0001t0004g0164 a0001c0001t0004g0165 a0001c0001t0004g0166 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0005g0020 a0001c0001t0021g0171 a0001c0005t0008g0021 a0001c0005t0008g0022 a0001c0007t0005g0228 a0001c0028t0003g0229 a0001c0031t0004g0167 a0002c0004t0011g0162	18	236	0.0763	11	c.415 others(28): Show c.415-3164_415-3163insACAAAACAAAA	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	4/47			chr12	TogoVar
CIT_chr12_119680791_119882320	119862808	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03209.hp1 NA18966.hp1 others(4): Show HG02109.hp1 HG03209.hp1 NA18966.hp1 NA19000.hp2 NA19009.hp1 NA19012.hp2 NA19066.hp1	a0001 a0007 a0001 a0007	a0001c0002 a0001c0003 a0001c0014 others(2): Show a0001c0002 a0001c0003 a0001c0014 a0001c0035 a0007c0022	a0001c0002t0002 a0001c0003t0003 a0001c0014t0001 others(2): Show a0001c0002t0002 a0001c0003t0003 a0001c0014t0001 a0001c0035t0003 a0007c0022t0002	a0001c0002t0002g0081 a0001c0002t0002g0083 a0001c0002t0002g0091 others(4): Show a0001c0002t0002g0081 a0001c0002t0002g0083 a0001c0002t0002g0091 a0001c0003t0003g0080 a0001c0014t0001g0084 a0001c0035t0003g0007 a0007c0022t0002g0082	7	236	0.0297	11	c.239 others(28): Show c.239-5121_239-5111dupTTTTTTTTTTT	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	3/47			chr12	TogoVar
CIZ1_chr9_128161065_128196572	128161087	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG02015.hp1 HG01070.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0189 a0001c0001t0001g0001 a0001c0001t0001g0189	2	380	0.0053	11	c.51 others(22): Show c.5109_*5110insTTTTTTTTTTT	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding		4977		chr9	TogoVar
CIZ1_chr9_128161065_128196572	128188049	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(46): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01192.hp2 HG01243.hp1 HG01258.hp1 HG01358.hp1 HG01361.hp1 HG01517.hp2 HG01952.hp2 HG01975.hp2 HG01981.hp1 HG02004.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp2 HG02257.hp1 HG02293.hp1 HG02300.hp1 HG02738.hp1 HG02738.hp2 HG02970.hp2 HG03017.hp1 HG03492.hp1 HG03927.hp1 HG04228.hp2 NA18954.hp1 NA18959.hp1 NA18963.hp1 NA18989.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19009.hp1 NA19010.hp1 NA19054.hp2 NA19062.hp1 NA19066.hp1 NA19067.hp1 NA19080.hp1	a0001 a0004 a0005 others(2): Show a0001 a0004 a0005 a0006 a0010	a0001c0001 a0001c0003 a0004c0006 others(3): Show a0001c0001 a0001c0003 a0004c0006 a0005c0008 a0006c0010 a0010c0020	a0001c0001t0001 a0001c0003t0001 a0004c0006t0001 others(3): Show a0001c0001t0001 a0001c0003t0001 a0004c0006t0001 a0005c0008t0001 a0006c0010t0001 a0010c0020t0001	a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 others(35): Show a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0028 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0216 a0001c0001t0001g0222 a0001c0001t0001g0228 a0001c0003t0001g0008 a0001c0003t0001g0118 a0001c0003t0001g0159 a0001c0003t0001g0214 a0001c0003t0001g0215 a0001c0003t0001g0217 a0004c0006t0001g0160 a0004c0006t0001g0194 a0005c0008t0001g0202 a0006c0010t0001g0025 a0006c0010t0001g0155 a0010c0020t0001g0158	49	380	0.1290	11	c.287 others(26): Show c.287-126_287-116dupTTTTTTTTTTT	CIZ1	ENSG00000148337.22	transcript	ENST00000372938.10	protein_coding	3/16			chr9	TogoVar
CKAP2_chr13_52450478_52481627	52452963	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp2 HG02145.hp1 HG02257.hp2 others(8): Show HG01192.hp2 HG02145.hp1 HG02257.hp2 HG02572.hp1 HG02630.hp1 HG02735.hp2 HG02965.hp2 HG03041.hp2 HG03704.hp1 NA19002.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0001 a0001c0001t0002 a0001c0001t0009	a0001c0001t0001g0004 a0001c0001t0001g0036 a0001c0001t0001g0053 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0036 a0001c0001t0001g0053 a0001c0001t0001g0066 a0001c0001t0001g0071 a0001c0001t0001g0079 a0001c0001t0001g0122 a0001c0001t0002g0037 a0001c0001t0002g0044 a0001c0001t0009g0192	11	406	0.0271	11	c.-25 others(22): Show c.-2594_-2593insTTTTTTTTTTT	CKAP2	ENSG00000136108.15	transcript	ENST00000258607.10	protein_coding		2514		chr13	TogoVar
CKAP4_chr12_106232881_106253020	106237526	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03688.hp1 HG04115.hp1 NA18944.hp1 HG03688.hp1 HG04115.hp1 NA18944.hp1	a0002 a0003 a0005 a0002 a0003 a0005	a0002c0002 a0003c0003 a0005c0006 a0002c0002 a0003c0003 a0005c0006	a0002c0002t0002 a0003c0003t0006 a0005c0006t0020 a0002c0002t0002 a0003c0003t0006 a0005c0006t0020	a0002c0002t0002g0002 a0003c0003t0006g0008 a0005c0006t0020g0049 a0002c0002t0002g0002 a0003c0003t0006g0008 a0005c0006t0020g0049	3	418	0.0072	11	c.14 others(22): Show c.1497_*1498insTTTTTTTTTTT	CKAP4	ENSG00000136026.14	transcript	ENST00000378026.5	protein_coding		354		chr12	TogoVar
CKLF_chr16_66547576_66571068	66553161	A A	AAAAACAA others(4): Show AAAAACAAAAAC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00544.hp1 HG00558.hp1 others(131): Show HG00280.hp1 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01099.hp2 HG01109.hp2 HG01175.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp1 HG01433.hp2 HG01884.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03669.hp2 HG03704.hp2 HG03927.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18941.hp2 NA18942.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18953.hp2 NA18954.hp2 NA18963.hp2 NA18964.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18978.hp2 NA18981.hp2 NA18986.hp1 NA18989.hp1 NA18992.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19012.hp2 NA19043.hp2 NA19054.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19068.hp1 NA19070.hp1 NA19075.hp1 NA19079.hp1 NA19080.hp1 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp1 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 others(40): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0003g0013 a0001c0002t0001g0030	134	392	0.3418	11	c.78+ others(24): Show c.78+373_78+383dupCAAAAACAAAA	CKLF	ENSG00000217555.13	transcript	ENST00000264001.9	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
CKM_chr19_45301413_45327875	45315849	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp1 HG01257.hp2 others(7): Show HG00140.hp2 HG00733.hp1 HG01257.hp2 HG01258.hp2 HG01358.hp1 HG01515.hp1 HG01515.hp2 HG02897.hp1 HG03239.hp1 NA18986.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0001 a0001c0002t0001 a0001c0004t0001	a0001c0002t0001g0015 a0001c0002t0001g0066 a0001c0002t0001g0067 others(6): Show a0001c0002t0001g0015 a0001c0002t0001g0066 a0001c0002t0001g0067 a0001c0002t0001g0073 a0001c0002t0001g0074 a0001c0002t0001g0075 a0001c0002t0001g0201 a0001c0002t0001g0274 a0001c0004t0001g0200	10	392	0.0255	11	c.349 others(26): Show c.349-253_349-252insAAAAAAAAAAA	CKM	ENSG00000104879.5	transcript	ENST00000221476.4	protein_coding	3/7			chr19	TogoVar
CKM_chr19_45301413_45327875	45321063	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0138 a0001c0002t0001g0138	1	392	0.0026	11	c.-18 others(28): Show c.-18-1343_-18-1333dupAAAAAAAAAAA	CKM	ENSG00000104879.5	transcript	ENST00000221476.4	protein_coding	1/7			chr19	TogoVar
CLASP1_chr2_121332776_121654462	121339149	A A	ACACACAC others(4): Show ACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0080 a0001c0001t0080	a0001c0001t0080g0049 a0001c0001t0080g0049	1	214	0.0047	11	c.17 others(22): Show c.1701_*1711dupGTGTGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	41/41	1711		chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478771	C C	CCACACAC others(4): Show CCACACACCCCA	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp2 HG00621.hp2 others(76): Show HG00438.hp1 HG00544.hp2 HG00621.hp2 HG00639.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01167.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01496.hp1 HG01891.hp2 HG01981.hp2 HG02015.hp1 HG02083.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02897.hp2 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03704.hp1 HG03942.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18946.hp2 NA18954.hp2 NA18956.hp1 NA18963.hp2 NA18966.hp2 NA18968.hp2 NA18969.hp2 NA18990.hp1 NA19043.hp2 NA19057.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20905.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0006 a0002c0003 others(1): Show a0001c0002 a0001c0006 a0002c0003 a0004c0004	a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 others(35): Show a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0009 a0001c0002t0010 a0001c0002t0011 a0001c0002t0013 a0001c0002t0014 a0001c0002t0015 a0001c0002t0016 a0001c0002t0017 a0001c0002t0019 a0001c0002t0021 a0001c0002t0024 a0001c0002t0029 a0001c0002t0038 a0001c0002t0039 a0001c0002t0040 a0001c0002t0042 a0001c0002t0043 a0001c0002t0046 a0001c0002t0047 a0001c0002t0052 a0001c0002t0055 a0001c0002t0056 a0001c0002t0060 a0001c0002t0061 a0001c0002t0065 a0001c0002t0066 a0001c0002t0069 a0001c0002t0070 a0001c0002t0072 a0001c0002t0073 a0001c0006t0057 a0002c0003t0032 a0002c0003t0033 a0004c0004t0013 a0004c0004t0015	a0001c0002t0005g0145 a0001c0002t0005g0147 a0001c0002t0005g0148 others(76): Show a0001c0002t0005g0145 a0001c0002t0005g0147 a0001c0002t0005g0148 a0001c0002t0005g0159 a0001c0002t0005g0160 a0001c0002t0005g0193 a0001c0002t0006g0162 a0001c0002t0006g0163 a0001c0002t0006g0164 a0001c0002t0006g0165 a0001c0002t0006g0166 a0001c0002t0006g0168 a0001c0002t0008g0195 a0001c0002t0008g0196 a0001c0002t0008g0197 a0001c0002t0008g0198 a0001c0002t0008g0199 a0001c0002t0008g0200 a0001c0002t0009g0155 a0001c0002t0009g0177 a0001c0002t0009g0178 a0001c0002t0009g0187 a0001c0002t0009g0188 a0001c0002t0010g0180 a0001c0002t0010g0183 a0001c0002t0010g0184 a0001c0002t0010g0190 a0001c0002t0010g0192 a0001c0002t0010g0203 a0001c0002t0011g0137 a0001c0002t0011g0172 a0001c0002t0011g0176 a0001c0002t0011g0182 a0001c0002t0013g0131 a0001c0002t0013g0132 a0001c0002t0013g0133 a0001c0002t0013g0134 a0001c0002t0014g0022 a0001c0002t0014g0023 a0001c0002t0015g0212 a0001c0002t0016g0181 a0001c0002t0016g0186 a0001c0002t0016g0191 a0001c0002t0017g0202 a0001c0002t0017g0204 a0001c0002t0017g0205 a0001c0002t0019g0174 a0001c0002t0019g0175 a0001c0002t0021g0130 a0001c0002t0021g0206 a0001c0002t0024g0135 a0001c0002t0024g0136 a0001c0002t0029g0201 a0001c0002t0029g0209 a0001c0002t0038g0210 a0001c0002t0039g0139 a0001c0002t0040g0153 a0001c0002t0042g0158 a0001c0002t0043g0173 a0001c0002t0046g0194 a0001c0002t0047g0179 a0001c0002t0052g0167 a0001c0002t0055g0149 a0001c0002t0056g0151 a0001c0002t0060g0154 a0001c0002t0061g0019 a0001c0002t0065g0150 a0001c0002t0066g0161 a0001c0002t0069g0185 a0001c0002t0070g0207 a0001c0002t0072g0213 a0001c0002t0073g0211 a0001c0006t0057g0152 a0002c0003t0032g0141 a0002c0003t0032g0208 a0002c0003t0033g0170 a0002c0003t0033g0171 a0004c0004t0013g0157 a0004c0004t0015g0156	79	214	0.3692	11	c.713 others(28): Show c.713-8812_713-8811insTGGGGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121478855	C C	CCACACCA others(4): Show CCACACCACACA	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01884.hp1 HG01891.hp1 others(8): Show HG01433.hp1 HG01884.hp1 HG01891.hp1 HG01943.hp2 HG02486.hp1 HG02615.hp2 HG02818.hp2 HG03098.hp1 HG06807.hp2 NA19043.hp1 NA20300.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0009 a0006c0007 a0001c0001 a0001c0009 a0006c0007	a0001c0001t0025 a0001c0001t0049 a0001c0001t0058 others(7): Show a0001c0001t0025 a0001c0001t0049 a0001c0001t0058 a0001c0001t0059 a0001c0001t0064 a0001c0001t0067 a0001c0001t0074 a0001c0001t0075 a0001c0009t0076 a0006c0007t0063	a0001c0001t0025g0006 a0001c0001t0025g0008 a0001c0001t0049g0011 others(8): Show a0001c0001t0025g0006 a0001c0001t0025g0008 a0001c0001t0049g0011 a0001c0001t0058g0010 a0001c0001t0059g0009 a0001c0001t0064g0007 a0001c0001t0067g0018 a0001c0001t0074g0024 a0001c0001t0075g0017 a0001c0009t0076g0012 a0006c0007t0063g0016	11	214	0.0514	11	c.713 others(28): Show c.713-8906_713-8896dupTGTGTGGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121479018	A A	ACACACAC others(4): Show ACACACACACAC	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0074 a0001c0001t0074	a0001c0001t0074g0024 a0001c0001t0074g0024	1	214	0.0047	11	c.713 others(28): Show c.713-9069_713-9059dupGTGTGTGTGTG	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121500397	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0079 a0001c0001t0079	a0001c0001t0079g0095 a0001c0001t0079g0095	1	214	0.0047	11	c.712 others(28): Show c.712+2769_712+2770insCTTTCTTTCTT	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	8/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121517858	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp1 NA20300.hp2 HG03471.hp1 NA20300.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0008 a0001c0002t0005 a0001c0002t0008	a0001c0002t0005g0193 a0001c0002t0008g0196 a0001c0002t0005g0193 a0001c0002t0008g0196	2	214	0.0094	11	c.547 others(28): Show c.547-2107_547-2097dupAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	6/40			chr2	TogoVar
CLASP1_chr2_121332776_121654462	121581260	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03669.hp1 NA18968.hp2 HG03669.hp1 NA18968.hp2	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0016 a0001c0006t0057 a0001c0002t0016 a0001c0006t0057	a0001c0002t0016g0186 a0001c0006t0057g0152 a0001c0002t0016g0186 a0001c0006t0057g0152	2	214	0.0094	11	c.195 others(30): Show c.195+24430_195+24440dupAAAAAAAAAAA	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	2/40			chr2	TogoVar
CLASP2_chr3_33491245_33723254	33506377	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0271 a0001c0001t0017g0271	1	278	0.0036	11	c.431 others(30): Show c.4317+4180_4317+4181insTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	37/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33568553	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01256.hp1 HG02004.hp1 NA20300.hp2 HG01256.hp1 HG02004.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0015 a0001c0001 a0001c0005 a0001c0015	a0001c0001t0002 a0001c0005t0008 a0001c0015t0002 a0001c0001t0002 a0001c0005t0008 a0001c0015t0002	a0001c0001t0002g0239 a0001c0005t0008g0262 a0001c0015t0002g0224 a0001c0001t0002g0239 a0001c0005t0008g0262 a0001c0015t0002g0224	3	278	0.0108	11	c.276 others(30): Show c.2764-1830_2764-1820dupTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	26/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33622878	G G	GCTCCACT others(4): Show GCTCCACTGCAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02809.hp2 HG03098.hp1 others(1): Show HG02451.hp2 HG02809.hp2 HG03098.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0008t0001 a0001c0001t0001 a0001c0008t0001	a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 others(1): Show a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0008t0001g0004	4	278	0.0144	11	c.103 others(28): Show c.1036-609_1036-599dupTTGCAGTGGAG	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	10/38			chr3	TogoVar
CLASP2_chr3_33491245_33723254	33667406	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01993.hp1 HG02451.hp2 others(18): Show HG01496.hp2 HG01993.hp1 HG02451.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG03209.hp2 HG03225.hp1 HG03486.hp1 NA18947.hp1 NA18952.hp2 NA18969.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA19000.hp2 NA19005.hp2 NA19077.hp2 NA19080.hp1 NA20752.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0013 a0001c0001 a0005c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0013 a0005c0013t0003	a0001c0001t0001g0072 a0001c0001t0001g0105 a0001c0001t0001g0169 others(18): Show a0001c0001t0001g0072 a0001c0001t0001g0105 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0056 a0001c0001t0002g0060 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0222 a0001c0001t0003g0029 a0001c0001t0003g0032 a0001c0001t0003g0035 a0001c0001t0003g0040 a0001c0001t0003g0042 a0001c0001t0003g0045 a0001c0001t0003g0048 a0001c0001t0003g0147 a0001c0001t0013g0055 a0005c0013t0003g0038	21	278	0.0755	11	c.645 others(28): Show c.645-3902_645-3892dupTTTTTTTTTTT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	6/38			chr3	TogoVar
CLASRP_chr19_45034045_45075956	45063436	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02145.hp1 HG02258.hp1 others(3): Show HG01358.hp2 HG02145.hp1 HG02258.hp1 HG02818.hp2 HG04184.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0216 others(3): Show a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0216 a0001c0001t0001g0303 a0001c0001t0001g0310 a0001c0001t0001g0311	6	364	0.0165	11	c.906 others(26): Show c.906-559_906-549dupTTTTTTTTTTT	CLASRP	ENSG00000104859.15	transcript	ENST00000221455.8	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr19	TogoVar
CLCA1_chr1_86463927_86505259	86464028	C C	CAATTTAC others(4): Show CAATTTACAATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	440	0.0023	11	c.-49 others(22): Show c.-4944_-4943insAATTTACAATA	CLCA1	ENSG00000016490.16	transcript	ENST00000394711.2	protein_coding		4898		chr1	TogoVar
CLCC1_chr1_108924505_108968484	108954028	A A	AAAAAAAA others(4): Show AAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0016 a0003c0007t0016	a0003c0007t0016g0133 a0003c0007t0016g0133	1	394	0.0025	11	c.-11 others(28): Show c.-11-3581_-11-3580insCTTTTTTTTTT	CLCC1	ENSG00000121940.17	transcript	ENST00000369969.7	protein_coding	2/12			chr1	TogoVar
CLCN1_chr7_143311111_143357083	143327258	A A	AGAAAGAA others(4): Show AGAAAGAAAAAG	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0006 a0006	a0006c0026 a0006c0026	a0006c0026t0001 a0006c0026t0001	a0006c0026t0001g0194 a0006c0026t0001g0194	1	414	0.0024	11	c.853 others(28): Show c.853+2766_853+2767insGAAAGAAAAAG	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	7/22			chr7	TogoVar
CLCN4_chrX_10151975_10242660	10153120	A A	ATATATAT others(4): Show ATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0155 a0001c0002t0039g0155	1	264	0.0038	11	c.-42 others(22): Show c.-4255_-4254insTATATATATAT	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding		3854		chrX	TogoVar
CLCN5_chrX_49917596_50104230	49994525	A A	AGGAAGAG others(4): Show AGGAAGAGTAGG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01255.hp1 HG02145.hp1 others(16): Show HG01167.hp1 HG01255.hp1 HG02145.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02809.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03130.hp1 HG03453.hp1 HG03486.hp2 NA18522.hp1 NA19030.hp1 NA19043.hp1 NA20129.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0002c0005	a0001c0001t0004 a0001c0002t0002 a0001c0002t0004 others(4): Show a0001c0001t0004 a0001c0002t0002 a0001c0002t0004 a0001c0002t0009 a0001c0002t0024 a0001c0009t0003 a0002c0005t0020	a0001c0001t0004g0163 a0001c0002t0002g0004 a0001c0002t0002g0006 others(16): Show a0001c0001t0004g0163 a0001c0002t0002g0004 a0001c0002t0002g0006 a0001c0002t0002g0007 a0001c0002t0002g0008 a0001c0002t0002g0009 a0001c0002t0002g0011 a0001c0002t0002g0012 a0001c0002t0002g0013 a0001c0002t0002g0014 a0001c0002t0002g0128 a0001c0002t0004g0002 a0001c0002t0004g0003 a0001c0002t0004g0016 a0001c0002t0009g0015 a0001c0002t0009g0017 a0001c0002t0024g0010 a0001c0009t0003g0005 a0002c0005t0020g0001	19	175	0.1086	11	c.17- others(28): Show c.17-47791_17-47790insGGAAGAGTAGG	CLCN5	ENSG00000171365.17	transcript	ENST00000376091.8	protein_coding	3/14			chrX	TogoVar
CLCN6_chr1_11801191_11848130	11846619	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG01074.hp1 HG01243.hp1 others(10): Show HG00642.hp2 HG01074.hp1 HG01243.hp1 HG01884.hp1 HG02109.hp2 HG02559.hp2 HG02572.hp1 HG02738.hp2 HG02895.hp1 HG02976.hp1 HG03098.hp1 HG03516.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0021 a0001c0003t0004	a0001c0001t0001g0096 a0001c0001t0001g0112 a0001c0001t0001g0113 others(10): Show a0001c0001t0001g0096 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0164 a0001c0001t0001g0245 a0001c0001t0003g0200 a0001c0001t0003g0204 a0001c0001t0003g0210 a0001c0001t0006g0207 a0001c0001t0006g0213 a0001c0001t0008g0161 a0001c0001t0021g0193 a0001c0003t0004g0056	13	290	0.0448	11	c.63 others(22): Show c.6396_*6397insTTTTTTTTTTT	CLCN6	ENSG00000011021.23	transcript	ENST00000346436.11	protein_coding		3490		chr1	TogoVar
CLCN7_chr16_1439935_1480028	1470331	A A	AAGGGGAT others(4): Show AAGGGGATGAGT	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	404	0.0025	11	c.141 others(28): Show c.141+4502_141+4503insACTCATCCCCT	CLCN7	ENSG00000103249.19	transcript	ENST00000382745.9	protein_coding	1/24			chr16	TogoVar
CLCNKA_chr1_16017036_16039050	16025653	T T	TTCCAGCC others(4): Show TTCCAGCCTGCA	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0023 a0023	a0023c0031 a0023c0031	a0023c0031t0002 a0023c0031t0002	a0023c0031t0002g0075 a0023c0031t0002g0075	1	392	0.0026	11	c.359 others(26): Show c.359-446_359-445insCATCCAGCCTG	CLCNKA	ENSG00000186510.12	transcript	ENST00000331433.5	protein_coding	4/19		INFO_REALIGN_3_PRIME	chr1	TogoVar
CLDN15_chr7_101227094_101242802	101239738	A A	AACAGGGA others(4): Show AACAGGGAAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG01106.hp2 others(13): Show HG00140.hp1 HG00323.hp2 HG01106.hp2 HG01515.hp1 HG01517.hp1 HG02698.hp1 HG02738.hp1 HG02818.hp2 HG02895.hp1 HG02970.hp1 HG03041.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp2 NA18906.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0045 others(4): Show a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0079 a0001c0001t0003g0027	16	402	0.0398	11	c.-21 others(22): Show c.-2168_-2158dupCCTTTCCCTGT	CLDN15	ENSG00000106404.14	transcript	ENST00000308344.10	protein_coding		1937		chr7	TogoVar
CLDN19_chr1_42728093_42745236	42729445	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp1 HG03209.hp2 HG01993.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	428	0.0047	11	c.56 others(22): Show c.5640_*5641insATATATATATA	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3647		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729447	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0045 a0001c0001t0005g0045	1	428	0.0023	11	c.56 others(22): Show c.5638_*5639insATATATATATA	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3645		chr1	TogoVar
CLDN19_chr1_42728093_42745236	42729451	A A	ATATATAT others(4): Show ATATATATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	428	0.0023	11	c.56 others(22): Show c.5634_*5635insATATATATATA	CLDN19	ENSG00000164007.11	transcript	ENST00000296387.6	protein_coding		3641		chr1	TogoVar

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