Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CLDN23_chr8_8696937_8709096	8705594	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 NA18522.hp2 HG03453.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	438	0.0046	11	c.23 others(22): Show c.2317_*2318insAAAAAAAAAAA	CLDN23	ENSG00000253958.2	transcript	ENST00000519106.2	protein_coding		1499		chr8	TogoVar
CLDN34_chrX_9962358_9973352	9968882	G G	GGTTTTTT others(4): Show GGTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG02818.hp1 HG02970.hp2 HG02622.hp1 HG02818.hp1 HG02970.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0000 a0003c0005t0002g0000	3	330	0.0091	11	c.88 others(20): Show c.880_*881insGTTTTTTTTTT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		531		chrX	TogoVar
CLDN34_chrX_9962358_9973352	9968882	G G	GTTTTTTG others(4): Show GTTTTTTGTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG02451.hp2 HG02717.hp1 others(9): Show HG01074.hp1 HG02451.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03471.hp1 NA18906.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0003t0004 a0001c0002t0001 a0001c0003t0001 a0001c0003t0004	a0001c0002t0001g0000 a0001c0003t0001g0000 a0001c0003t0004g0000 a0001c0002t0001g0000 a0001c0003t0001g0000 a0001c0003t0004g0000	12	330	0.0364	11	c.88 others(20): Show c.880_*881insTTTTTTGTTTT	CLDN34	ENSG00000234469.4	transcript	ENST00000445307.4	protein_coding		531		chrX	TogoVar
CLDN7_chr17_7254903_7267478	7265112	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18977.hp2 NA19070.hp1 NA19090.hp1 NA18977.hp2 NA19070.hp1 NA19090.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0003 a0001c0003t0002g0003	3	418	0.0072	11	c.-30 others(22): Show c.-3070_-3069insAAAAAAAAAAA	CLDN7	ENSG00000181885.18	transcript	ENST00000360325.11	protein_coding		2635		chr17	TogoVar
CLDN8_chr21_30209006_30221097	30220649	T T	TGGGGGGG others(4): Show TGGGGGGGGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	1	466	0.0022	11	c.-47 others(22): Show c.-4725_-4724insCCCCCCCCCCC	CLDN8	ENSG00000156284.6	transcript	ENST00000399899.2	protein_coding		4553		chr21	TogoVar
CLEC10A_chr17_7069537_7085251	7070600	A A	AAAGAAAG others(4): Show AAAGAAAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp2 HG03239.hp1 NA19067.hp2 HG03017.hp2 HG03239.hp1 NA19067.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0001c0002 a0002c0001	a0001c0002t0001 a0002c0001t0001 a0001c0002t0001 a0002c0001t0001	a0001c0002t0001g0002 a0001c0002t0001g0084 a0002c0001t0001g0113 a0001c0002t0001g0002 a0001c0002t0001g0084 a0002c0001t0001g0113	3	458	0.0066	11	c.44 others(22): Show c.4453_*4454insCTTTCTTTCTT	CLEC10A	ENSG00000132514.14	transcript	ENST00000416562.7	protein_coding		3936		chr17	TogoVar
CLEC16A_chr16_10939564_11187186	11018748	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01361.hp1 HG01884.hp2 others(22): Show HG01261.hp1 HG01361.hp1 HG01884.hp2 HG02027.hp2 HG02055.hp2 HG02074.hp2 HG02109.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02486.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02895.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp1 HG03540.hp1 HG04115.hp2 NA18947.hp2 NA18994.hp2 NA19076.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0002c0006	a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 others(4): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0034 a0001c0009t0001 a0002c0006t0008	a0001c0001t0005g0123 a0001c0002t0001g0054 a0001c0002t0001g0058 others(22): Show a0001c0001t0005g0123 a0001c0002t0001g0054 a0001c0002t0001g0058 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0086 a0001c0002t0001g0087 a0001c0002t0001g0089 a0001c0002t0001g0116 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0001g0228 a0001c0002t0001g0253 a0001c0002t0001g0259 a0001c0002t0001g0260 a0001c0002t0001g0268 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0062 a0001c0002t0002g0066 a0001c0002t0002g0079 a0001c0002t0003g0224 a0001c0002t0034g0254 a0001c0009t0001g0088 a0002c0006t0008g0091	25	274	0.0912	11	c.130 others(30): Show c.1304-1438_1304-1428dupAAAAAAAAAAA	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC16A_chr16_10939564_11187186	11040514	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03098.hp2 NA18522.hp2 HG03098.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0008 a0001c0002 a0001c0008	a0001c0002t0007 a0001c0008t0023 a0001c0002t0007 a0001c0008t0023	a0001c0002t0007g0227 a0001c0008t0023g0229 a0001c0002t0007g0227 a0001c0008t0023g0229	2	274	0.0073	11	c.166 others(28): Show c.1660+644_1660+654dupTTTTTTTTTTT	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC16A_chr16_10939564_11187186	11055575	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02683.hp2 HG02145.hp2 HG02683.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0017 a0001c0003 a0002c0017	a0001c0003t0004 a0002c0017t0006 a0001c0003t0004 a0002c0017t0006	a0001c0003t0004g0014 a0002c0017t0006g0094 a0001c0003t0004g0014 a0002c0017t0006g0094	2	274	0.0073	11	c.199 others(30): Show c.1995+3955_1995+3965dupTTTTTTTTTTT	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	18/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC16A_chr16_10939564_11187186	11132237	C C	CCCCCACC others(4): Show CCCCCACCCCCG	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01891.hp2 HG02280.hp1 others(6): Show HG01261.hp1 HG01891.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0001 a0001c0002t0006 a0001c0002t0011 others(1): Show a0001c0002t0001 a0001c0002t0006 a0001c0002t0011 a0001c0009t0001	a0001c0002t0001g0054 a0001c0002t0001g0087 a0001c0002t0001g0089 others(6): Show a0001c0002t0001g0054 a0001c0002t0001g0087 a0001c0002t0001g0089 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0006g0222 a0001c0002t0011g0090 a0001c0009t0001g0088 a0001c0009t0001g0221	9	274	0.0329	11	c.264 others(30): Show c.2641+6095_2641+6096insACCCCCGCCCC	CLEC16A	ENSG00000038532.17	transcript	ENST00000409790.6	protein_coding	22/23		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC17A_chr19_14578084_14617035	14587268	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0006 a0003c0003t0006	a0003c0003t0006g0050 a0003c0003t0006g0050	1	364	0.0028	11	c.122 others(26): Show c.122-346_122-345insGTGTGTGTGTG	CLEC17A	ENSG00000187912.12	transcript	ENST00000417570.6	protein_coding	2/13			chr19	TogoVar
CLEC18B_chr16_74403631_74426478	74408110	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02738.hp1 HG02897.hp2 HG03017.hp2 others(5): Show HG02738.hp1 HG02897.hp2 HG03017.hp2 HG03704.hp1 NA18953.hp1 NA18966.hp2 NA18972.hp2 NA19054.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0006 a0003c0004 a0001c0001 a0001c0006 a0003c0004	a0001c0001t0001 a0001c0006t0001 a0003c0004t0001 a0001c0001t0001 a0001c0006t0001 a0003c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0006t0001g0033 others(1): Show a0001c0001t0001g0002 a0001c0001t0001g0051 a0001c0006t0001g0033 a0003c0004t0001g0003	8	287	0.0279	11	c.89 others(20): Show c.895_*896insTTTTTTTTTTT	CLEC18B	ENSG00000140839.13	transcript	ENST00000682950.1	protein_coding		520		chr16	TogoVar
CLEC18C_chr16_70168787_70191895	70176728	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03486.hp1 NA18906.hp1 HG03098.hp2 HG03486.hp1 NA18906.hp1	a0004 a0017 a0004 a0017	a0004c0004 a0017c0028 a0004c0004 a0017c0028	a0004c0004t0006 a0017c0028t0006 a0004c0004t0006 a0017c0028t0006	a0004c0004t0006g0097 a0004c0004t0006g0117 a0017c0028t0006g0104 a0004c0004t0006g0097 a0004c0004t0006g0117 a0017c0028t0006g0104	3	355	0.0085	11	c.217 others(26): Show c.217-512_217-502dupAAAAAAAAAAA	CLEC18C	ENSG00000157335.21	transcript	ENST00000541793.7	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC19A_chr16_19280731_19315947	19315293	C C	CATACACA others(4): Show CATACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0098 a0002c0003t0002g0098	1	426	0.0024	11	c.62 others(22): Show c.6210_*6211insATACACACACA	CLEC19A	ENSG00000261210.8	transcript	ENST00000636231.2	protein_coding		4347		chr16	TogoVar
CLEC2A_chr12_9908227_9937370	9933319	T T	TAAAACTG others(4): Show TAAAACTGGCTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0074 a0002c0002t0001g0074	1	436	0.0023	11	c.-99 others(20): Show c.-991_-990insCAGCCAGTTTT	CLEC2A	ENSG00000188393.9	transcript	ENST00000455827.2	protein_coding		950		chr12	TogoVar
CLEC2B_chr12_9847369_9874354	9871200	A A	ATTTTTAA others(4): Show ATTTTTAAGATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG01257.hp2 HG01884.hp1 others(7): Show HG01109.hp2 HG01257.hp2 HG01884.hp1 HG02451.hp2 HG02486.hp1 HG02717.hp2 HG03041.hp1 HG03486.hp1 NA18906.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 others(5): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0043 a0001c0001t0044 a0001c0001t0051	a0001c0001t0003g0177 a0001c0001t0004g0176 a0001c0001t0012g0026 others(6): Show a0001c0001t0003g0177 a0001c0001t0004g0176 a0001c0001t0012g0026 a0001c0001t0012g0087 a0001c0001t0016g0178 a0001c0001t0017g0207 a0001c0001t0043g0184 a0001c0001t0044g0086 a0001c0001t0051g0186	10	454	0.0220	11	c.-19 others(22): Show c.-1999_-1998insAATCTTAAAAA	CLEC2B	ENSG00000110852.5	transcript	ENST00000228438.3	protein_coding		1847		chr12	TogoVar
CLEC3A_chr16_78017548_78037101	78022758	A A	ATCAAGCA others(4): Show ATCAAGCAAAAT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03225.hp2 HG01109.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0048 a0001c0001t0013g0049 a0001c0001t0001g0048 a0001c0001t0013g0049	2	448	0.0045	11	c.115 others(24): Show c.115+20_115+30dupAAGCAAAATTC	CLEC3A	ENSG00000166509.12	transcript	ENST00000299642.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
CLEC4A_chr12_8118617_8143607	8122927	G G	GTGGCAGA others(4): Show GTGGCAGAATCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	458	0.0022	11	c.-95 others(20): Show c.-952_-951insTGGCAGAATCC	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding		689		chr12	TogoVar
CLEC4A_chr12_8118617_8143607	8135047	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(129): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01123.hp2 HG01175.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp2 HG01891.hp1 HG01891.hp2 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02040.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp2 HG02129.hp1 HG02132.hp2 HG02258.hp1 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02738.hp2 HG02818.hp1 HG03017.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03492.hp2 HG03654.hp1 HG03669.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 NA18612.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp2 NA18953.hp2 NA18956.hp1 NA18960.hp2 NA18963.hp2 NA18964.hp1 NA18971.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18985.hp1 NA18987.hp1 NA18987.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18999.hp2 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19012.hp2 NA19043.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA20129.hp2 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 a0001c0001 a0001c0009 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0009t0001 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0006 a0002c0002t0012 a0002c0002t0015	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(82): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0013 a0001c0001t0001g0020 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0057 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0202 a0001c0001t0001g0211 a0001c0001t0001g0220 a0001c0001t0001g0223 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0233 a0001c0001t0001g0239 a0001c0001t0001g0247 a0001c0001t0001g0253 a0001c0001t0001g0258 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0013 a0001c0001t0002g0196 a0001c0001t0002g0199 a0001c0001t0002g0285 a0001c0001t0006g0068 a0001c0001t0006g0224 a0001c0009t0001g0197 a0002c0002t0001g0002 a0002c0002t0001g0018 a0002c0002t0001g0019 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0039 a0002c0002t0001g0060 a0002c0002t0001g0081 a0002c0002t0001g0103 a0002c0002t0001g0120 a0002c0002t0001g0121 a0002c0002t0001g0138 a0002c0002t0001g0142 a0002c0002t0001g0152 a0002c0002t0001g0153 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0001g0164 a0002c0002t0001g0170 a0002c0002t0002g0002 a0002c0002t0002g0007 a0002c0002t0002g0018 a0002c0002t0002g0019 a0002c0002t0002g0035 a0002c0002t0002g0041 a0002c0002t0002g0130 a0002c0002t0002g0185 a0002c0002t0003g0078 a0002c0002t0003g0082 a0002c0002t0003g0085 a0002c0002t0003g0088 a0002c0002t0003g0096 a0002c0002t0003g0105 a0002c0002t0003g0106 a0002c0002t0003g0113 a0002c0002t0003g0174 a0002c0002t0003g0181 a0002c0002t0005g0097 a0002c0002t0005g0182 a0002c0002t0006g0002 a0002c0002t0006g0033 a0002c0002t0012g0179 a0002c0002t0015g0098	132	458	0.2882	11	c.299 others(26): Show c.299-526_299-516dupTTTTTTTTTTT	CLEC4A	ENSG00000111729.15	transcript	ENST00000229332.12	protein_coding	3/5		INFO_REALIGN_3_PRIME	chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750820	T T	TACAAAAA others(4): Show TACAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0010 a0001c0001t0003g0010	1	448	0.0022	11	c.-34 others(22): Show c.-3473_-3472insTTTTTTTTTGT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3446		chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750822	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03491.hp1 NA18944.hp1 NA18946.hp1 others(1): Show HG03491.hp1 NA18944.hp1 NA18946.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0010 a0001c0001t0003g0049 a0001c0001t0003g0002 a0001c0001t0003g0010 a0001c0001t0003g0049	4	448	0.0089	11	c.-34 others(22): Show c.-3475_-3474insTTTTTTTTTTT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3448		chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750843	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 NA20300.hp2 HG02630.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0089 a0001c0001t0004g0132 a0001c0001t0002g0089 a0001c0001t0004g0132	2	448	0.0045	11	c.-34 others(22): Show c.-3496_-3495insGTTTTTTTTTT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3469		chr12	TogoVar
CLEC4C_chr12_7724383_7752375	7750846	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0246 a0001c0001t0004g0246	1	448	0.0022	11	c.-34 others(22): Show c.-3499_-3498insGTTTTTTTTTT	CLEC4C	ENSG00000198178.11	transcript	ENST00000360345.8	protein_coding		3472		chr12	TogoVar
CLEC4F_chr2_70803643_70825599	70814838	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01891.hp2 HG01243.hp2 HG01891.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0152 a0005c0005t0001g0156 a0005c0005t0001g0152 a0005c0005t0001g0156	2	414	0.0048	11	c.138 others(30): Show c.1387+1145_1387+1155dupTTTTTTTTTTT	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding	4/6			chr2	TogoVar
CLEC4F_chr2_70803643_70825599	70824621	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00438.hp1 HG00621.hp1 others(69): Show HG00323.hp1 HG00438.hp1 HG00621.hp1 HG00642.hp1 HG00741.hp1 HG01081.hp1 HG01123.hp2 HG01256.hp1 HG01517.hp1 HG01891.hp1 HG01934.hp1 HG01943.hp2 HG01993.hp1 HG02015.hp2 HG02027.hp1 HG02056.hp2 HG02080.hp1 HG02165.hp1 HG02683.hp2 HG02970.hp1 HG02976.hp1 HG03492.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18973.hp1 NA18974.hp1 NA18975.hp2 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18985.hp2 NA18993.hp1 NA18994.hp2 NA18997.hp2 NA18999.hp1 NA19005.hp1 NA19006.hp2 NA19054.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp2 NA19064.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19074.hp2 NA19081.hp1 NA19082.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0007 a0009 a0024	a0001c0002 a0002c0001 a0003c0003 others(3): Show a0001c0002 a0002c0001 a0003c0003 a0007c0008 a0009c0010 a0024c0023	a0001c0002t0001 a0001c0002t0002 a0002c0001t0001 others(6): Show a0001c0002t0001 a0001c0002t0002 a0002c0001t0001 a0002c0001t0008 a0003c0003t0001 a0003c0003t0003 a0007c0008t0001 a0009c0010t0003 a0024c0023t0001	a0001c0002t0001g0008 a0001c0002t0001g0009 a0001c0002t0001g0035 others(42): Show a0001c0002t0001g0008 a0001c0002t0001g0009 a0001c0002t0001g0035 a0001c0002t0002g0052 a0002c0001t0001g0001 a0002c0001t0001g0002 a0002c0001t0001g0003 a0002c0001t0001g0005 a0002c0001t0001g0006 a0002c0001t0001g0011 a0002c0001t0001g0014 a0002c0001t0001g0015 a0002c0001t0001g0020 a0002c0001t0001g0021 a0002c0001t0001g0037 a0002c0001t0001g0039 a0002c0001t0001g0040 a0002c0001t0001g0041 a0002c0001t0001g0044 a0002c0001t0001g0095 a0002c0001t0001g0099 a0002c0001t0001g0101 a0002c0001t0001g0102 a0002c0001t0001g0103 a0002c0001t0001g0104 a0002c0001t0001g0106 a0002c0001t0001g0108 a0002c0001t0001g0109 a0002c0001t0001g0111 a0002c0001t0001g0115 a0002c0001t0001g0118 a0002c0001t0001g0119 a0002c0001t0001g0126 a0002c0001t0001g0127 a0002c0001t0001g0131 a0002c0001t0001g0132 a0002c0001t0001g0133 a0002c0001t0008g0105 a0003c0003t0001g0064 a0003c0003t0001g0065 a0003c0003t0003g0217 a0007c0008t0001g0023 a0009c0010t0003g0122 a0009c0010t0003g0124 a0024c0023t0001g0236	72	414	0.1739	11	c.-40 others(22): Show c.-4099_-4098insTTTTTTTTTTT	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding		4023		chr2	TogoVar
CLEC4F_chr2_70803643_70825599	70824637	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0006 a0002c0001t0001g0006	1	414	0.0024	11	c.-41 others(22): Show c.-4115_-4114insGTTTTTTTTTT	CLEC4F	ENSG00000152672.8	transcript	ENST00000272367.7	protein_coding		4039		chr2	TogoVar
CLEC4G_chr19_7723957_7737110	7727233	T T	TTGTATTT others(4): Show TTGTATTTTTAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	432	0.0023	11	c.21 others(22): Show c.2132_*2133insCTAAAAATACA	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		1723		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAAAAT others(4): Show AAAAAAATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	432	0.0023	11	c.-80 others(20): Show c.-805_-804insATATATTTTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAAAATAT others(4): Show AAAAATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 HG03486.hp2 HG03130.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	432	0.0046	11	c.-80 others(20): Show c.-805_-804insATATATATTTT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	AAATATAT others(4): Show AAATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	432	0.0023	11	c.-80 others(20): Show c.-805_-804insATATATATATT	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC4G_chr19_7723957_7737110	7732906	A A	ATATATAT others(4): Show ATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	432	0.0023	11	c.-80 others(20): Show c.-805_-804insATATATATATA	CLEC4G	ENSG00000182566.15	transcript	ENST00000328853.11	protein_coding		797		chr19	TogoVar
CLEC5A_chr7_141922357_141951974	141948810	A A	ATTAATGC others(4): Show ATTAATGCTTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	386	0.0026	11	c.-20 others(22): Show c.-2025_-2024insACAAGCATTAA	CLEC5A	ENSG00000258227.7	transcript	ENST00000546910.6	protein_coding		1837		chr7	TogoVar
CLEC5A_chr7_141922357_141951974	141949435	A A	AGTGTGTG others(4): Show AGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0004 a0001c0001t0005g0004	1	386	0.0026	11	c.-26 others(22): Show c.-2660_-2650dupCACACACACAC	CLEC5A	ENSG00000258227.7	transcript	ENST00000546910.6	protein_coding		2462		chr7	TogoVar
CLEC7A_chr12_10111777_10135199	10123767	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02145.hp1 HG03098.hp1 others(6): Show HG02135.hp2 HG02145.hp1 HG03098.hp1 HG03209.hp2 HG03942.hp1 NA18522.hp1 NA18940.hp1 NA19054.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(4): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0023 a0001c0001t0032	a0001c0001t0002g0182 a0001c0001t0004g0068 a0001c0001t0007g0110 others(5): Show a0001c0001t0002g0182 a0001c0001t0004g0068 a0001c0001t0007g0110 a0001c0001t0007g0187 a0001c0001t0008g0077 a0001c0001t0013g0080 a0001c0001t0023g0198 a0001c0001t0032g0199	9	450	0.0200	11	c.493 others(26): Show c.493-415_493-405dupTTTTTTTTTTT	CLEC7A	ENSG00000172243.18	transcript	ENST00000304084.13	protein_coding	4/5			chr12	TogoVar
CLGN_chr4_140383453_140432648	140425429	G G	GGTGTGTG others(4): Show GGTGTGTGGTGT	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0045 a0001c0001t0002g0045	1	358	0.0028	11	c.-10 others(28): Show c.-10+2107_-10+2108insACACCACACAC	CLGN	ENSG00000153132.13	transcript	ENST00000325617.10	protein_coding	1/14			chr4	TogoVar
CLHC1_chr2_55167547_55237293	55217550	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02738.hp2 HG01358.hp2 HG02738.hp2	a0002 a0002	a0002c0001 a0002c0010 a0002c0001 a0002c0010	a0002c0001t0001 a0002c0010t0014 a0002c0001t0001 a0002c0010t0014	a0002c0001t0001g0240 a0002c0010t0014g0310 a0002c0001t0001g0240 a0002c0010t0014g0310	2	404	0.0050	11	c.365 others(26): Show c.365+260_365+261insATATATATATA	CLHC1	ENSG00000162994.16	transcript	ENST00000401408.6	protein_coding	4/12			chr2	TogoVar
CLIC5_chr6_45893456_46020860	45900531	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00544.hp1 HG00642.hp2 HG01069.hp1 others(51): Show HG00544.hp1 HG00642.hp2 HG01069.hp1 HG01123.hp1 HG01346.hp1 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp2 HG01943.hp2 HG01981.hp1 HG02040.hp1 HG02109.hp2 HG02155.hp1 HG02257.hp2 HG02293.hp1 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02886.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03942.hp1 HG04184.hp2 HG06807.hp2 NA18612.hp1 NA18944.hp2 NA18951.hp1 NA18952.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18973.hp1 NA18974.hp2 NA18989.hp2 NA18994.hp1 NA18995.hp2 NA19001.hp2 NA19003.hp1 NA19004.hp1 NA19010.hp2 NA19012.hp1 NA19066.hp1 NA19068.hp1 NA19088.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0012 a0001c0001t0013 others(4): Show a0001c0001t0003 a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0017 a0001c0001t0041 a0001c0001t0049	a0001c0001t0003g0010 a0001c0001t0003g0044 a0001c0001t0003g0053 others(51): Show a0001c0001t0003g0010 a0001c0001t0003g0044 a0001c0001t0003g0053 a0001c0001t0003g0058 a0001c0001t0003g0065 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0084 a0001c0001t0003g0104 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0001t0003g0154 a0001c0001t0003g0155 a0001c0001t0003g0165 a0001c0001t0003g0166 a0001c0001t0003g0167 a0001c0001t0003g0168 a0001c0001t0003g0169 a0001c0001t0003g0181 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0206 a0001c0001t0003g0209 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0215 a0001c0001t0003g0225 a0001c0001t0003g0229 a0001c0001t0003g0232 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0242 a0001c0001t0003g0248 a0001c0001t0003g0261 a0001c0001t0003g0271 a0001c0001t0003g0309 a0001c0001t0012g0079 a0001c0001t0012g0301 a0001c0001t0012g0310 a0001c0001t0013g0040 a0001c0001t0013g0042 a0001c0001t0013g0045 a0001c0001t0016g0117 a0001c0001t0016g0334 a0001c0001t0017g0082 a0001c0001t0017g0094 a0001c0001t0041g0013 a0001c0001t0049g0338	54	340	0.1588	11	c.25 others(22): Show c.2546_*2556dupTTTTTTTTTTT	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	6/6	2556		chr6	TogoVar
CLIC5_chr6_45893456_46020860	45922823	A A	AGAGAGAG others(4): Show AGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02738.hp2 NA18944.hp1 HG02071.hp2 HG02738.hp2 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0063 a0001c0001t0002g0291 a0001c0001t0002g0300 a0001c0001t0002g0063 a0001c0001t0002g0291 a0001c0001t0002g0300	3	340	0.0088	11	c.407 others(28): Show c.407-8415_407-8414insCTCTCTCTCTC	CLIC5	ENSG00000112782.19	transcript	ENST00000339561.12	protein_coding	4/5			chr6	TogoVar
CLINT1_chr5_157780747_157864145	157830746	C C	CCCTCTCT others(4): Show CCCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0049 a0001c0001t0003g0049	1	340	0.0029	11	c.42- others(28): Show c.42-13200_42-13199insAGAGAGAGAGG	CLINT1	ENSG00000113282.14	transcript	ENST00000411809.7	protein_coding	1/11			chr5	TogoVar
CLINT1_chr5_157780747_157864145	157859659	A A	ATGATACA others(4): Show ATGATACAATGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG01099.hp2 others(10): Show HG00735.hp2 HG00738.hp2 HG01099.hp2 HG01346.hp2 HG01361.hp1 HG02280.hp1 HG02486.hp2 HG02683.hp2 HG02735.hp2 HG03492.hp1 HG04115.hp1 HG04228.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0086 a0001c0001t0002g0196 a0001c0001t0002g0197 others(10): Show a0001c0001t0002g0086 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0206 a0001c0001t0002g0207	13	340	0.0382	11	c.-69 others(20): Show c.-690_-689insACATTGTATCA	CLINT1	ENSG00000113282.14	transcript	ENST00000411809.7	protein_coding		515		chr5	TogoVar
CLIP1_chr12_122266469_122427669	122293002	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0221 a0001c0001t0006g0221	1	234	0.0043	11	c.359 others(30): Show c.3595-4472_3595-4462dupTTTTTTTTTTT	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	20/25			chr12	TogoVar
CLIP1_chr12_122266469_122427669	122330597	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0017 a0001c0005t0017	a0001c0005t0017g0233 a0001c0005t0017g0233	1	234	0.0043	11	c.286 others(30): Show c.2868-2182_2868-2172dupAAAAAAAAAAA	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	15/25			chr12	TogoVar
CLIP1_chr12_122266469_122427669	122387590	A A	ATATATTT others(4): Show ATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03490.hp1 HG02622.hp2 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0189 a0001c0001t0006g0221 a0001c0001t0002g0189 a0001c0001t0006g0221	2	234	0.0086	11	c.-10 others(30): Show c.-106-7033_-106-7032insAAAAAAATATA	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	1/25			chr12	TogoVar
CLIP1_chr12_122266469_122427669	122387590	A A	ATATTTTT others(4): Show ATATTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0197 a0001c0001t0002g0197	1	234	0.0043	11	c.-10 others(30): Show c.-106-7033_-106-7032insAAAAAAAAATA	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	1/25			chr12	TogoVar
CLIP1_chr12_122266469_122427669	122389758	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01167.hp2 HG01169.hp1 others(12): Show HG01081.hp1 HG01167.hp2 HG01169.hp1 HG01192.hp1 HG01516.hp1 HG01993.hp2 HG02165.hp2 HG02698.hp1 HG03669.hp2 HG04184.hp1 NA18942.hp2 NA18952.hp2 NA18970.hp2 NA18974.hp1 NA19085.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0006 a0002c0002 a0003c0003 a0004c0006	a0002c0002t0001 a0002c0002t0002 a0003c0003t0001 others(1): Show a0002c0002t0001 a0002c0002t0002 a0003c0003t0001 a0004c0006t0001	a0002c0002t0001g0099 a0002c0002t0001g0101 a0002c0002t0001g0108 others(12): Show a0002c0002t0001g0099 a0002c0002t0001g0101 a0002c0002t0001g0108 a0002c0002t0001g0117 a0002c0002t0001g0119 a0002c0002t0001g0121 a0002c0002t0001g0122 a0002c0002t0001g0159 a0002c0002t0001g0160 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0002g0039 a0003c0003t0001g0125 a0004c0006t0001g0110 a0004c0006t0001g0118	15	234	0.0641	11	c.-10 others(30): Show c.-106-9211_-106-9201dupTTTTTTTTTTT	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	1/25			chr12	TogoVar
CLIP1_chr12_122266469_122427669	122393912	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp2 HG00735.hp1 others(53): Show HG00323.hp2 HG00423.hp2 HG00735.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01175.hp2 HG01192.hp2 HG01258.hp1 HG01261.hp1 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01928.hp2 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02083.hp1 HG02145.hp2 HG02165.hp1 HG02273.hp1 HG02559.hp2 HG02622.hp1 HG02738.hp1 HG02895.hp2 HG02897.hp1 HG03041.hp2 HG03471.hp2 HG03831.hp1 HG04184.hp1 HG04199.hp1 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18522.hp2 NA18941.hp1 NA18956.hp1 NA18968.hp1 NA18973.hp1 NA18987.hp1 NA18987.hp2 NA19005.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19068.hp1 NA19068.hp2 NA19086.hp1 NA19240.hp2 NA20300.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0005 a0001c0009 others(5): Show a0001c0001 a0001c0005 a0001c0009 a0002c0002 a0002c0011 a0002c0012 a0003c0003 a0005c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(18): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0023 a0001c0001t0024 a0001c0005t0017 a0001c0009t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0005 a0002c0002t0020 a0002c0011t0001 a0002c0012t0002 a0003c0003t0001 a0005c0013t0003	a0001c0001t0001g0163 a0001c0001t0003g0034 a0001c0001t0003g0041 others(53): Show a0001c0001t0001g0163 a0001c0001t0003g0034 a0001c0001t0003g0041 a0001c0001t0003g0056 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0075 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0091 a0001c0001t0006g0046 a0001c0001t0008g0053 a0001c0001t0008g0057 a0001c0001t0008g0074 a0001c0001t0008g0076 a0001c0001t0009g0035 a0001c0001t0009g0036 a0001c0001t0009g0044 a0001c0001t0010g0038 a0001c0001t0013g0087 a0001c0001t0013g0088 a0001c0001t0015g0072 a0001c0001t0015g0083 a0001c0001t0016g0032 a0001c0001t0023g0071 a0001c0001t0024g0082 a0001c0005t0017g0233 a0001c0005t0017g0234 a0001c0009t0006g0045 a0002c0002t0001g0095 a0002c0002t0001g0105 a0002c0002t0001g0121 a0002c0002t0001g0128 a0002c0002t0001g0132 a0002c0002t0001g0133 a0002c0002t0001g0138 a0002c0002t0001g0141 a0002c0002t0001g0159 a0002c0002t0002g0097 a0002c0002t0002g0111 a0002c0002t0002g0154 a0002c0002t0002g0157 a0002c0002t0005g0147 a0002c0002t0005g0152 a0002c0002t0020g0140 a0002c0011t0001g0155 a0002c0012t0002g0085 a0003c0003t0001g0098 a0003c0003t0001g0104 a0005c0013t0003g0067	56	234	0.2393	11	c.-10 others(32): Show c.-106-13365_-106-13355dupTTTTTTTTTTT	CLIP1	ENSG00000130779.22	transcript	ENST00000620786.5	protein_coding	1/25			chr12	TogoVar
CLIP2_chr7_74284407_74410935	74390162	G G	GAAAAAGA others(4): Show GAAAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02717.hp2 HG02896.hp1 others(2): Show HG00609.hp1 HG02717.hp2 HG02896.hp1 HG03831.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0124 a0001c0001t0001g0148 a0001c0002t0001g0167 others(2): Show a0001c0001t0001g0124 a0001c0001t0001g0148 a0001c0002t0001g0167 a0001c0002t0001g0239 a0001c0002t0001g0269	5	278	0.0180	11	c.272 others(28): Show c.2720+905_2720+906insAAAGAAAGAAA	CLIP2	ENSG00000106665.16	transcript	ENST00000223398.11	protein_coding	13/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
CLK1_chr2_200848009_200869658	200853679	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0068 a0001c0001t0003g0068	1	418	0.0024	11	c.131 others(28): Show c.1311+213_1311+223dupTTTTTTTTTTT	CLK1	ENSG00000013441.17	transcript	ENST00000321356.9	protein_coding	12/12			chr2	TogoVar
CLK3_chr15_74610836_74635201	74612079	A A	AGCTGGTC others(4): Show AGCTGGTCTGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18977.hp1 NA18977.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	354	0.0028	11	c.-38 others(22): Show c.-3820_-3819insGCTGGTCTGGG	CLK3	ENSG00000179335.20	transcript	ENST00000395066.9	protein_coding		3756		chr15	TogoVar
CLMN_chr14_95176940_95324908	95319911	C C	CGGGCGCG others(4): Show CGGGCGCGGGCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0013	a0001c0005t0013g0004 a0001c0005t0013g0004	1	276	0.0036	11	c.-12 others(20): Show c.-120_-119insCGCCCGCGCCC	CLMN	ENSG00000165959.12	transcript	ENST00000298912.9	protein_coding		4		chr14	TogoVar

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