Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNOT3_chr19_54132762_54160681	54134207	T T	TCCCTCCC others(4): Show TCCCTCCCTCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0126 a0001c0002t0001g0126	1	223	0.0045	11	c.-38 others(22): Show c.-3837_-3836insCCCTCCCTCCC	CNOT3	ENSG00000088038.20	transcript	ENST00000221232.11	protein_coding		3554		chr19	TogoVar
CNOT4_chr7_135356795_135515102	135453847	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0041	1	362	0.0028	11	c.-92 others(30): Show c.-92-15425_-92-15424insTATATATATAT	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT4_chr7_135356795_135515102	135472510	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0166	1	362	0.0028	11	c.-92 others(30): Show c.-92-34088_-92-34087insATATATATATA	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT4_chr7_135356795_135515102	135472514	A A	AAAAAAAT others(4): Show AAAAAAATATAT	intron_variant intron_variant	MODIFIER	NA19002.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0169 a0001c0001t0001g0169	1	362	0.0028	11	c.-92 others(30): Show c.-92-34092_-92-34091insATATATTTTTT	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT4_chr7_135356795_135515102	135472514	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	362	0.0028	11	c.-92 others(30): Show c.-92-34092_-92-34091insATATATATATA	CNOT4	ENSG00000080802.21	transcript	ENST00000541284.6	protein_coding	1/11			chr7	TogoVar
CNOT6L_chr4_77708387_77824368	77754888	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00597.hp1 others(22): Show HG00099.hp2 HG00323.hp2 HG00597.hp1 HG00597.hp2 HG00735.hp2 HG01069.hp2 HG01346.hp1 HG01346.hp2 HG02559.hp1 HG02976.hp1 HG03225.hp1 HG03453.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 NA18941.hp2 NA18970.hp1 NA19002.hp1 NA19077.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0044	a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0109 others(22): Show a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0131 a0001c0001t0001g0140 a0001c0001t0001g0154 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0225 a0001c0001t0001g0270 a0001c0001t0003g0008 a0001c0001t0004g0083 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0136 a0001c0001t0004g0156 a0001c0001t0004g0197 a0001c0001t0004g0200 a0001c0001t0005g0176 a0001c0001t0005g0177 a0001c0001t0005g0178 a0001c0001t0044g0112	25	328	0.0762	11	c.490 others(28): Show c.490+1963_490+1973dupTTTTTTTTTTT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	5/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77760860	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01069.hp1 HG01081.hp1 others(9): Show HG00280.hp1 HG01069.hp1 HG01081.hp1 HG01358.hp1 HG02280.hp2 HG02293.hp1 HG02717.hp2 HG02976.hp1 HG03927.hp1 NA19043.hp1 NA19091.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0028	a0001c0001t0001g0002 a0001c0001t0001g0210 a0001c0001t0003g0006 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0210 a0001c0001t0003g0006 a0001c0001t0003g0093 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0005g0177 a0001c0001t0005g0202 a0001c0001t0010g0090 a0001c0001t0010g0091 a0001c0001t0028g0211	12	328	0.0366	11	c.401 others(28): Show c.401-3920_401-3910dupAAAAAAAAAAA	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	4/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77779046	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0183 a0001c0001t0004g0183	1	328	0.0031	11	c.6-2 others(24): Show c.6-2665_6-2655dupTTTTTTTTTTT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	1/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77789290	A A	AGCTCCCC others(4): Show AGCTCCCCCCAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02257.hp2 HG00323.hp1 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0161 a0001c0001t0001g0163	2	328	0.0061	11	c.6-1 others(26): Show c.6-12909_6-12899dupGTGGGGGGAGC	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	1/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77807276	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0269 a0001c0001t0037g0269	1	328	0.0031	11	c.5+1 others(26): Show c.5+12017_5+12027dupTTTTTTTTTTT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	1/11			chr4	TogoVar
CNOT6_chr5_180489379_180583358	180510134	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02723.hp2 NA18980.hp2 HG00609.hp1 HG02723.hp2 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0058 a0001c0001t0002 a0001c0001t0008 a0001c0001t0058	a0001c0001t0002g0077 a0001c0001t0008g0285 a0001c0001t0058g0095 a0001c0001t0002g0077 a0001c0001t0008g0285 a0001c0001t0058g0095	3	334	0.0090	11	c.-3+ others(28): Show c.-3+15396_-3+15406dupTTTTTTTTTTT	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CNOT6_chr5_180489379_180583358	180577163	A A	ATTGTGTG others(4): Show ATTGTGTGTGTG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0169 a0001c0001t0044g0169	1	334	0.0030	11	c.29 others(22): Show c.2964_*2965insTGTGTGTGTGT	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding	12/12	2965	INFO_REALIGN_3_PRIME	chr5	TogoVar
CNOT7_chr8_17219966_17251857	17226029	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA21309.hp1 NA21309.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0105 a0001c0001t0106 a0001c0001t0105 a0001c0001t0106	a0001c0001t0105g0210 a0001c0001t0106g0205 a0001c0001t0105g0210 a0001c0001t0106g0205	2	408	0.0049	11	c.46 others(22): Show c.4680_*4690dupAAAAAAAAAAA	CNOT7	ENSG00000198791.12	transcript	ENST00000361272.9	protein_coding	7/7	4690		chr8	TogoVar
CNOT9_chr2_218563839_218602080	218588588	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02897.hp2 HG02083.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0013 a0001c0001t0004 a0001c0001t0013	a0001c0001t0004g0199 a0001c0001t0013g0154 a0001c0001t0004g0199 a0001c0001t0013g0154	2	322	0.0062	11	c.540 others(26): Show c.540+909_540+919dupTTTTTTTTTTT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNOT9_chr2_218563839_218602080	218595404	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG01884.hp2 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0041 a0001c0001t0040 a0001c0001t0041	a0001c0001t0040g0018 a0001c0001t0041g0181 a0001c0001t0040g0018 a0001c0001t0041g0181	2	322	0.0062	11	c.11 others(22): Show c.1146_*1156dupTTTTTTTTTTT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	8/8	1157	INFO_REALIGN_3_PRIME	chr2	TogoVar
CNPY1_chr7_155496129_155551559	155500534	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG03139.hp2 HG03492.hp2 others(2): Show HG01891.hp2 HG03139.hp2 HG03492.hp2 NA19054.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0007 a0001c0001t0042 a0001c0002t0015 others(1): Show a0001c0001t0007 a0001c0001t0042 a0001c0002t0015 a0001c0004t0015	a0001c0001t0007g0095 a0001c0001t0007g0192 a0001c0001t0042g0085 others(2): Show a0001c0001t0007g0095 a0001c0001t0007g0192 a0001c0001t0042g0085 a0001c0002t0015g0340 a0001c0004t0015g0295	5	426	0.0117	11	c.25 others(22): Show c.2523_*2533dupAAAAAAAAAAA	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding		594		chr7	TogoVar
CNPY1_chr7_155496129_155551559	155507471	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp2 HG03209.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0010 a0001c0003t0022 a0001c0001t0010 a0001c0003t0022	a0001c0001t0010g0103 a0001c0003t0022g0080 a0001c0001t0010g0103 a0001c0003t0022g0080	2	426	0.0047	11	c.304 others(26): Show c.304-366_304-356dupTTTTTTTTTTT	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding	3/4			chr7	TogoVar
CNPY1_chr7_155496129_155551559	155527030	T T	TTTTCTTC others(4): Show TTTTCTTCTTTC	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0003 a0001c0004t0003	a0001c0004t0003g0296 a0001c0004t0003g0296	1	426	0.0024	11	c.100 others(30): Show c.100-17934_100-17933insGAAAGAAGAAA	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding	2/4			chr7	TogoVar
CNPY1_chr7_155496129_155551559	155527055	T T	TTTCTTTC others(4): Show TTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02109.hp2 HG02451.hp2 others(3): Show HG01255.hp2 HG02109.hp2 HG02451.hp2 HG02486.hp1 NA20129.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0015 a0001c0001t0007 a0001c0001t0015	a0001c0001t0007g0078 a0001c0001t0007g0079 a0001c0001t0007g0264 others(3): Show a0001c0001t0007g0078 a0001c0001t0007g0079 a0001c0001t0007g0264 a0001c0001t0007g0266 a0001c0001t0007g0267 a0001c0001t0015g0383	6	426	0.0141	11	c.100 others(30): Show c.100-17959_100-17958insGAAAGAAAGAA	CNPY1	ENSG00000146910.14	transcript	ENST00000636446.2	protein_coding	2/4			chr7	TogoVar
CNPY2_chr12_56304844_56320988	56312222	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	372	0.0027	11	c.205 others(26): Show c.205-819_205-809dupAAAAAAAAAAA	CNPY2	ENSG00000257727.6	transcript	ENST00000273308.9	protein_coding	3/5			chr12	TogoVar
CNPY4_chr7_100114634_100130508	100121116	A A	ATATACAT others(4): Show ATATACATATAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0074	1	416	0.0024	11	c.119 others(28): Show c.119-1142_119-1141insATACATATATT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121116	A A	ATATATTT others(4): Show ATATATTTTTTT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	416	0.0024	11	c.119 others(28): Show c.119-1142_119-1141insATATTTTTTTT	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNPY4_chr7_100114634_100130508	100121117	T T	TATATATA others(4): Show TATATATATATA	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0090 a0001c0001t0001g0090	1	416	0.0024	11	c.119 others(28): Show c.119-1142_119-1141insATATATATATA	CNPY4	ENSG00000166997.8	transcript	ENST00000262932.5	protein_coding	1/5			chr7	TogoVar
CNR2_chr1_23865515_23918362	23869244	A A	AAGGAAGG others(4): Show AAGGAAGGAAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00408.hp2 HG00438.hp1 others(115): Show HG00099.hp1 HG00408.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00639.hp1 HG00673.hp2 HG01070.hp2 HG01071.hp2 HG01106.hp1 HG01106.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01361.hp1 HG01361.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02074.hp1 HG02080.hp1 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp2 NA18943.hp2 NA18944.hp2 NA18948.hp1 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18967.hp1 NA18975.hp1 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18988.hp1 NA19000.hp1 NA19001.hp2 NA19007.hp2 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19070.hp2 NA19077.hp1 NA19083.hp1 NA19089.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(21): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0035 a0001c0001t0037 a0001c0001t0039 a0001c0001t0040 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0048 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0067 a0004c0004t0020	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(115): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0079 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0113 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0139 a0001c0001t0001g0146 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0234 a0001c0001t0001g0237 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0244 a0001c0001t0001g0257 a0001c0001t0003g0014 a0001c0001t0003g0015 a0001c0001t0003g0023 a0001c0001t0003g0026 a0001c0001t0003g0032 a0001c0001t0003g0035 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0055 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0089 a0001c0001t0003g0091 a0001c0001t0003g0094 a0001c0001t0003g0111 a0001c0001t0003g0126 a0001c0001t0003g0140 a0001c0001t0003g0141 a0001c0001t0003g0238 a0001c0001t0005g0012 a0001c0001t0005g0048 a0001c0001t0005g0060 a0001c0001t0005g0236 a0001c0001t0005g0247 a0001c0001t0005g0251 a0001c0001t0005g0252 a0001c0001t0005g0253 a0001c0001t0005g0254 a0001c0001t0006g0080 a0001c0001t0006g0196 a0001c0001t0006g0210 a0001c0001t0006g0256 a0001c0001t0006g0266 a0001c0001t0008g0005 a0001c0001t0008g0157 a0001c0001t0011g0136 a0001c0001t0011g0241 a0001c0001t0016g0150 a0001c0001t0016g0206 a0001c0001t0017g0134 a0001c0001t0017g0178 a0001c0001t0018g0268 a0001c0001t0035g0046 a0001c0001t0037g0267 a0001c0001t0039g0100 a0001c0001t0040g0169 a0001c0001t0042g0239 a0001c0001t0043g0033 a0001c0001t0044g0213 a0001c0001t0045g0132 a0001c0001t0046g0145 a0001c0001t0048g0195 a0001c0001t0050g0228 a0001c0001t0051g0045 a0001c0001t0052g0087 a0001c0001t0067g0211 a0004c0004t0020g0231	118	268	0.4403	11	c.52 others(22): Show c.5290_*5291insCCTTCCTTCCT	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding		1270		chr1	TogoVar
CNR2_chr1_23865515_23918362	23891275	T T	TGTGTGTG others(4): Show TGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	268	0.0037	11	c.-45 others(30): Show c.-45-15614_-45-15613insCACACACACAC	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNR2_chr1_23865515_23918362	23904668	G G	GTGGGAGG others(4): Show GTGGGAGGAGCA	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	268	0.0037	11	c.-46 others(28): Show c.-46+8567_-46+8577dupTGCTCCTCCCA	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNRIP1_chr2_68288010_68324949	68306124	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG01243.hp1 others(1): Show HG00280.hp2 HG00323.hp2 HG01243.hp1 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0054 a0001c0001t0001g0122 a0001c0001t0001g0197 others(1): Show a0001c0001t0001g0054 a0001c0001t0001g0122 a0001c0001t0001g0197 a0001c0001t0004g0219	4	424	0.0094	11	c.330 others(30): Show c.330+11022_330+11032dupTTTTTTTTTTT	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNST_chr1_246561456_246673595	246577995	T T	TGCCTTTG others(4): Show TGCCTTTGGGAC	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0044 a0003c0003t0001g0044	1	320	0.0031	11	c.-52 others(30): Show c.-52+11332_-52+11333insGCCTTTGGGAC	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	1/10			chr1	TogoVar
CNST_chr1_246561456_246673595	246642132	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0008 a0001c0001t0017g0008	1	320	0.0031	11	c.937 others(24): Show c.937+95_937+96insTTTTTTTTTTT	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	8/10			chr1	TogoVar
CNST_chr1_246561456_246673595	246646279	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00408.hp2 others(59): Show HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG01081.hp2 HG01109.hp2 HG01261.hp1 HG01433.hp1 HG01884.hp1 HG02056.hp1 HG02056.hp2 HG02083.hp2 HG02109.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp2 HG02280.hp2 HG02559.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03471.hp1 HG03491.hp1 HG03704.hp1 HG03834.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG06807.hp2 NA18906.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18948.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18979.hp1 NA18983.hp1 NA18999.hp1 NA19011.hp1 NA19030.hp1 NA19070.hp2 NA19085.hp1 NA19087.hp2 NA19090.hp2 NA19240.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0009 a0002c0002 a0001c0001 a0001c0009 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0013 a0001c0009t0001 a0002c0002t0001	a0001c0001t0001g0022 a0001c0001t0001g0156 a0001c0001t0001g0160 others(59): Show a0001c0001t0001g0022 a0001c0001t0001g0156 a0001c0001t0001g0160 a0001c0001t0001g0166 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0210 a0001c0001t0001g0219 a0001c0001t0001g0228 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0257 a0001c0001t0001g0260 a0001c0001t0001g0266 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0277 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0293 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0298 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0314 a0001c0001t0002g0201 a0001c0001t0002g0218 a0001c0001t0002g0224 a0001c0001t0002g0235 a0001c0001t0002g0243 a0001c0001t0002g0281 a0001c0001t0002g0284 a0001c0001t0002g0310 a0001c0001t0003g0206 a0001c0001t0003g0220 a0001c0001t0003g0294 a0001c0001t0003g0297 a0001c0001t0004g0157 a0001c0001t0004g0158 a0001c0001t0004g0159 a0001c0001t0005g0155 a0001c0001t0005g0203 a0001c0001t0005g0204 a0001c0001t0005g0205 a0001c0001t0008g0020 a0001c0001t0008g0176 a0001c0001t0013g0196 a0001c0009t0001g0191 a0002c0002t0001g0130	62	320	0.1938	11	c.938 others(26): Show c.938-855_938-845dupAAAAAAAAAAA	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
CNTD1_chr17_42793861_42816587	42801510	A A	AAATATAT others(4): Show AAATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	306	0.0033	11	c.170 others(28): Show c.170-2109_170-2108insATATATATATA	CNTD1	ENSG00000176563.10	transcript	ENST00000588408.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
CNTFR_chr9_34546433_34594724	34582297	A A	AAAAAAAA others(4): Show AAAAAAAAAAAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01070.hp1 HG01123.hp1 others(1): Show HG00738.hp1 HG01070.hp1 HG01123.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0073 a0001c0001t0001g0083 a0001c0001t0002g0081 others(1): Show a0001c0001t0001g0073 a0001c0001t0001g0083 a0001c0001t0002g0081 a0001c0001t0002g0082	4	402	0.0100	11	c.-11 others(30): Show c.-111-1093_-111-1092insGTTTTTTTTTT	CNTFR	ENSG00000122756.15	transcript	ENST00000378980.8	protein_coding	1/9			chr9	TogoVar
CNTLN_chr9_17130040_17508923	17202646	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA18943.hp2 NA18954.hp1 HG03209.hp1 NA18943.hp2 NA18954.hp1	a0001 a0020 a0001 a0020	a0001c0004 a0020c0041 a0001c0004 a0020c0041	a0001c0004t0001 a0020c0041t0001 a0001c0004t0001 a0020c0041t0001	a0001c0004t0001g0005 a0001c0004t0001g0007 a0020c0041t0001g0106 a0001c0004t0001g0005 a0001c0004t0001g0007 a0020c0041t0001g0106	3	218	0.0138	11	c.450 others(30): Show c.450-23543_450-23533dupTTTTTTTTTTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	2/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17338337	G G	GTTTTTTT others(4): Show GTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0013 a0013	a0013c0019 a0013c0019	a0013c0019t0002 a0013c0019t0002	a0013c0019t0002g0120 a0013c0019t0002g0120	1	218	0.0046	11	c.164 others(30): Show c.1645-2482_1645-2472dupTTTTTTTTTTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	10/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359717	T T	TAAAAAAA others(4): Show TAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02735.hp1 HG03453.hp1 others(2): Show HG02622.hp1 HG02735.hp1 HG03453.hp1 HG03486.hp1 NA19240.hp2	a0004 a0008 a0004 a0008	a0004c0003 a0008c0009 a0004c0003 a0008c0009	a0004c0003t0001 a0004c0003t0002 a0004c0003t0004 others(2): Show a0004c0003t0001 a0004c0003t0002 a0004c0003t0004 a0004c0003t0006 a0008c0009t0002	a0004c0003t0001g0146 a0004c0003t0002g0181 a0004c0003t0004g0180 others(2): Show a0004c0003t0001g0146 a0004c0003t0002g0181 a0004c0003t0004g0180 a0004c0003t0006g0198 a0008c0009t0002g0187	5	218	0.0229	11	c.188 others(30): Show c.1887-6895_1887-6894insAAAAAAAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359728	A A	AAACAAAC others(4): Show AAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02109.hp1 HG02895.hp1 others(2): Show HG01109.hp1 HG02109.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1	a0011 a0013 a0011 a0013	a0011c0015 a0013c0019 a0011c0015 a0013c0019	a0011c0015t0002 a0013c0019t0002 a0011c0015t0002 a0013c0019t0002	a0011c0015t0002g0213 a0011c0015t0002g0214 a0011c0015t0002g0215 others(2): Show a0011c0015t0002g0213 a0011c0015t0002g0214 a0011c0015t0002g0215 a0013c0019t0002g0119 a0013c0019t0002g0120	5	218	0.0229	11	c.188 others(30): Show c.1887-6887_1887-6886insCAAACAAACAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17359732	A A	AAACAAAC others(4): Show AAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0021 a0021	a0021c0054 a0021c0054	a0021c0054t0002 a0021c0054t0002	a0021c0054t0002g0016 a0021c0054t0002g0016	1	218	0.0046	11	c.188 others(30): Show c.1887-6883_1887-6882insCAAACAAACAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTN1_chr12_40687439_41077415	40698228	A A	ATTTTTTT others(4): Show ATTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0057 a0001c0004t0007g0057	1	230	0.0044	11	c.-77 others(28): Show c.-77+5654_-77+5664dupTTTTTTTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40809850	A A	ACACACAC others(4): Show ACACACACACAC	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01433.hp1 HG01258.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0038 a0001c0001t0002g0019 a0001c0001t0001g0038 a0001c0001t0002g0019	2	230	0.0087	11	c.-76 others(30): Show c.-76-98507_-76-98506insCACACACACAC	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40813038	C C	CTTTCTTT others(4): Show CTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0004 a0001c0009t0004	a0001c0009t0004g0046 a0001c0009t0004g0046	1	230	0.0044	11	c.-76 others(30): Show c.-76-95319_-76-95318insTTTCTTTCTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40924881	C C	CATACTAT others(4): Show CATACTATATAT	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	230	0.0044	11	c.496 others(26): Show c.496+232_496+233insCTATATATATA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	6/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41053428	A A	ATATATAT others(4): Show ATATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0061 a0001c0003t0003g0061	1	230	0.0044	11	c.298 others(32): Show c.2981-16531_2981-16530insTATATATATAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	23/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	41075673	A A	AAGAGAAG others(4): Show AAGAGAAGGAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0053 a0001c0005t0002g0053	1	230	0.0044	11	c.56 others(22): Show c.5638_*5639insAGAGAAGGAAG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding		3259		chr12	TogoVar
CNTN4_chr3_2093866_3062959	2198028	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03041.hp1 HG03516.hp2 HG02257.hp1 HG03041.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0022 a0001c0001 a0001c0022	a0001c0001t0001 a0001c0001t0004 a0001c0022t0003 a0001c0001t0001 a0001c0001t0004 a0001c0022t0003	a0001c0001t0001g0033 a0001c0001t0004g0042 a0001c0022t0003g0083 a0001c0001t0001g0033 a0001c0001t0004g0042 a0001c0022t0003g0083	3	116	0.0259	11	c.-14 others(32): Show c.-145+97393_-145+97403dupAAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2294288	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02559.hp2 NA18906.hp2 HG01243.hp2 HG02559.hp2 NA18906.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0001c0006 a0005c0012 a0001c0002 a0001c0006 a0005c0012	a0001c0002t0002 a0001c0006t0002 a0005c0012t0009 a0001c0002t0002 a0001c0006t0002 a0005c0012t0009	a0001c0002t0002g0102 a0001c0006t0002g0051 a0005c0012t0009g0093 a0001c0002t0002g0102 a0001c0006t0002g0051 a0005c0012t0009g0093	3	116	0.0259	11	c.-14 others(32): Show c.-144-44885_-144-44875dupTTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2600005	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0020 a0001c0004t0001g0020	1	116	0.0086	11	c.55+ others(28): Show c.55+28449_55+28450insTTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2611297	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03139.hp2 HG03486.hp1 others(1): Show HG02647.hp2 HG03139.hp2 HG03486.hp1 HG03516.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0010 others(1): Show a0001c0002 a0001c0005 a0001c0010 a0001c0023	a0001c0002t0001 a0001c0005t0001 a0001c0010t0003 others(1): Show a0001c0002t0001 a0001c0005t0001 a0001c0010t0003 a0001c0023t0004	a0001c0002t0001g0088 a0001c0005t0001g0090 a0001c0010t0003g0011 others(1): Show a0001c0002t0001g0088 a0001c0005t0001g0090 a0001c0010t0003g0011 a0001c0023t0004g0041	4	116	0.0345	11	c.55+ others(28): Show c.55+39744_55+39754dupAAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2820961	C C	CTTTTTTT others(4): Show CTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03516.hp1 HG02572.hp1 HG03516.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0001 a0001c0005t0001 a0001c0002t0001 a0001c0005t0001	a0001c0002t0001g0110 a0001c0005t0001g0090 a0001c0002t0001g0110 a0001c0005t0001g0090	2	116	0.0172	11	c.454 others(28): Show c.454+1388_454+1398dupTTTTTTTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3050763	C C	CAAAAAAA others(4): Show CAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01884.hp2 HG01891.hp2 others(2): Show HG01361.hp2 HG01884.hp2 HG01891.hp2 HG03540.hp1 NA18906.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0005c0012	a0001c0001t0009 a0001c0002t0003 a0001c0002t0004 others(2): Show a0001c0001t0009 a0001c0002t0003 a0001c0002t0004 a0001c0006t0003 a0005c0012t0009	a0001c0001t0009g0052 a0001c0002t0003g0024 a0001c0002t0004g0017 others(2): Show a0001c0001t0009g0052 a0001c0002t0003g0024 a0001c0002t0004g0017 a0001c0006t0003g0069 a0005c0012t0009g0093	5	116	0.0431	11	c.281 others(30): Show c.2812-3034_2812-3024dupAAAAAAAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	23/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99131249	G G	GAAAAAAA others(4): Show GAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG01243.hp1 others(3): Show HG00738.hp1 HG01099.hp2 HG01243.hp1 HG02109.hp2 HG03041.hp1 HG03130.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0002c0002 a0009c0012 a0001c0001 a0002c0002 a0009c0012	a0001c0001t0003 a0001c0001t0006 a0002c0002t0003 others(2): Show a0001c0001t0003 a0001c0001t0006 a0002c0002t0003 a0002c0002t0004 a0009c0012t0008	a0001c0001t0003g0021 a0001c0001t0006g0040 a0002c0002t0003g0036 others(3): Show a0001c0001t0003g0021 a0001c0001t0006g0040 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0039 a0009c0012t0008g0026	6	66	0.0909	11	c.-21 others(34): Show c.-210+109984_-210+109994dupAAAAAAAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar

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