Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CAGE1_chr6_7321659_7394742	7358027	G G	GATATATA others(5): Show GATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG00621.hp1 others(19): Show HG00099.hp2 HG00438.hp1 HG00621.hp1 HG00642.hp2 HG01168.hp1 HG01169.hp2 HG01496.hp2 HG02148.hp1 HG02155.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03927.hp2 NA18612.hp2 NA18945.hp1 NA18953.hp2 NA18971.hp1 NA18973.hp1 NA19030.hp2 NA19054.hp1 NA19063.hp2 NA19082.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0003c0004t0001 a0001c0001t0001 a0001c0001t0002 a0003c0004t0001	a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 others(19): Show a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0209 a0001c0001t0001g0219 a0001c0001t0002g0247 a0001c0001t0002g0261 a0001c0001t0002g0264 a0001c0001t0002g0266 a0001c0001t0002g0271 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0002g0301 a0001c0001t0002g0323 a0001c0001t0002g0332 a0001c0001t0002g0333 a0001c0001t0002g0340 a0001c0001t0002g0346 a0001c0001t0002g0349 a0003c0004t0001g0213 a0003c0004t0001g0228	22	360	0.0611	12	c.219 others(31): Show c.2194-1910_2194-1899dupATATATATATAT	CAGE1	ENSG00000164304.16	transcript	ENST00000502583.6	protein_coding	9/13			chr6	TogoVar
CAGE1_chr6_7321659_7394742	7358028	A A	ATATATAT others(5): Show ATATATATATATG	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG04184.hp1 HG01192.hp2 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0327 a0001c0001t0002g0331 a0001c0001t0002g0327 a0001c0001t0002g0331	2	360	0.0056	12	c.219 others(31): Show c.2194-1900_2194-1899insCATATATATATA	CAGE1	ENSG00000164304.16	transcript	ENST00000502583.6	protein_coding	9/13			chr6	TogoVar
CAGE1_chr6_7321659_7394742	7358065	T T	TATATATA others(5): Show TATATATATATAC	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0099 a0001c0002t0001g0099	1	360	0.0028	12	c.219 others(31): Show c.2194-1937_2194-1936insGTATATATATAT	CAGE1	ENSG00000164304.16	transcript	ENST00000502583.6	protein_coding	9/13			chr6	TogoVar
CAGE1_chr6_7321659_7394742	7376389	A A	AAAATAAA others(5): Show AAAATAAATAAAT	intron_variant intron_variant	MODIFIER	NA19009.hp2 NA19080.hp2 NA19009.hp2 NA19080.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0193 a0002c0003t0001g0143 a0001c0001t0001g0193 a0002c0003t0001g0143	2	360	0.0056	12	c.687 others(29): Show c.687+2216_687+2227dupATTTATTTATTT	CAGE1	ENSG00000164304.16	transcript	ENST00000502583.6	protein_coding	4/13			chr6	TogoVar
CAGE1_chr6_7321659_7394742	7387749	G G	GTATCCCT others(5): Show GTATCCCTCCGAT	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0265 a0001c0001t0002g0265	1	360	0.0028	12	c.-23 others(27): Show c.-23-554_-23-553insATCGGAGGGATA	CAGE1	ENSG00000164304.16	transcript	ENST00000502583.6	protein_coding	1/13			chr6	TogoVar
CALB1_chr8_90053608_90087879	90056954	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0046 a0001c0001t0003g0046	1	384	0.0026	12	c.32 others(23): Show c.3218_*3219insAAAAAAAAAAAA	CALB1	ENSG00000104327.7	transcript	ENST00000265431.7	protein_coding		1653		chr8	TogoVar
CALB1_chr8_90053608_90087879	90070837	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	384	0.0026	12	c.232 others(29): Show c.232-1612_232-1601dupACACACACACAC	CALB1	ENSG00000104327.7	transcript	ENST00000265431.7	protein_coding	3/10			chr8	TogoVar
CALB1_chr8_90053608_90087879	90083799	G G	GTATATAT others(5): Show GTATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp1 HG02027.hp2 HG03486.hp2 others(3): Show HG01255.hp1 HG02027.hp2 HG03486.hp2 NA19005.hp1 NA19089.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 others(3): Show a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0061 a0001c0001t0001g0079 a0001c0001t0006g0045	6	384	0.0156	12	c.-11 others(23): Show c.-1114_-1103dupTATATATATATA	CALB1	ENSG00000104327.7	transcript	ENST00000265431.7	protein_coding		921		chr8	TogoVar
CALB2_chr16_71353723_71395433	71356943	A A	ATTTTTTT others(5): Show ATTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG02109.hp2 HG03209.hp1 others(4): Show HG00140.hp1 HG02109.hp2 HG03209.hp1 HG06807.hp2 NA18906.hp1 NA18943.hp1 NA19088.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0002	a0001c0001t0001g0033 a0001c0001t0001g0368 a0001c0001t0002g0346 others(3): Show a0001c0001t0001g0033 a0001c0001t0001g0368 a0001c0001t0002g0346 a0001c0001t0003g0053 a0001c0001t0003g0270 a0002c0002t0002g0006	7	426	0.0164	12	c.-18 others(23): Show c.-1850_-1849insTTTTTTTTTTTT	CALB2	ENSG00000172137.19	transcript	ENST00000302628.9	protein_coding		1779		chr16	TogoVar
CALB2_chr16_71353723_71395433	71366022	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03688.hp2 NA18949.hp2 NA18992.hp2 HG03688.hp2 NA18949.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0355 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0355	3	426	0.0070	12	c.95- others(27): Show c.95-6130_95-6129insTTTTTTTTTTTT	CALB2	ENSG00000172137.19	transcript	ENST00000302628.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
CALB2_chr16_71353723_71395433	71382016	A A	AGAGGAGG others(5): Show AGAGGAGGAGGAG	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00609.hp1 HG02698.hp2 others(1): Show HG00597.hp1 HG00609.hp1 HG02698.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0197 a0001c0001t0001g0234 a0001c0001t0001g0235 others(1): Show a0001c0001t0001g0197 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0355	4	426	0.0094	12	c.343 others(27): Show c.343-687_343-676dupGAGGAGGAGGAG	CALB2	ENSG00000172137.19	transcript	ENST00000302628.9	protein_coding	4/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
CALCOCO1_chr12_53703517_53732452	53726079	G G	GCACCCCC others(5): Show GCACCCCCCCCTA	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0105 a0001c0003t0001g0105	1	428	0.0023	12	c.-24 others(27): Show c.-24-814_-24-813insTAGGGGGGGGTG	CALCOCO1	ENSG00000012822.16	transcript	ENST00000550804.6	protein_coding	1/14			chr12	TogoVar
CALCOCO2_chr17_48826035_48870245	48827159	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG01099.hp2 HG01346.hp2 others(5): Show HG00099.hp2 HG01099.hp2 HG01346.hp2 HG02004.hp2 HG02055.hp1 HG03130.hp1 HG03471.hp2 NA20752.hp1	a0003 a0003	a0003c0003 a0003c0005 a0003c0003 a0003c0005	a0003c0003t0001 a0003c0003t0004 a0003c0005t0004 a0003c0003t0001 a0003c0003t0004 a0003c0005t0004	a0003c0003t0001g0035 a0003c0003t0001g0036 a0003c0003t0001g0055 others(5): Show a0003c0003t0001g0035 a0003c0003t0001g0036 a0003c0003t0001g0055 a0003c0003t0001g0058 a0003c0003t0001g0065 a0003c0003t0004g0123 a0003c0003t0004g0129 a0003c0005t0004g0127	8	328	0.0244	12	c.-39 others(23): Show c.-3930_-3929insAAAAAAAAAAAA	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding		3875		chr17	TogoVar
CALCOCO2_chr17_48826035_48870245	48854382	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0132 a0003c0003t0001g0132	1	328	0.0031	12	c.912 others(29): Show c.912+1374_912+1385dupATATATATATAT	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
CALCOCO2_chr17_48826035_48870245	48854396	A A	ATATATAT others(5): Show ATATATATTTTTT	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0207 a0002c0002t0001g0207	1	328	0.0031	12	c.912 others(29): Show c.912+1385_912+1386insATATATTTTTTT	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding	9/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
CALCOCO2_chr17_48826035_48870245	48857497	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp1 HG02145.hp1 others(3): Show HG01243.hp1 HG02109.hp1 HG02145.hp1 HG03471.hp1 HG03579.hp1 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0003c0006 a0001c0001 a0003c0003 a0003c0006	a0001c0001t0002 a0001c0001t0027 a0003c0003t0004 others(1): Show a0001c0001t0002 a0001c0001t0027 a0003c0003t0004 a0003c0006t0015	a0001c0001t0002g0122 a0001c0001t0002g0243 a0001c0001t0002g0245 others(3): Show a0001c0001t0002g0122 a0001c0001t0002g0243 a0001c0001t0002g0245 a0001c0001t0027g0290 a0003c0003t0004g0138 a0003c0006t0015g0011	6	328	0.0183	12	c.100 others(31): Show c.1008+1322_1008+1333dupTTTTTTTTTTTT	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
CALCOCO2_chr17_48826035_48870245	48858029	G G	GAATAGAA others(5): Show GAATAGAATAGAA	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0154 a0002c0002t0001g0154	1	328	0.0031	12	c.100 others(31): Show c.1008+1843_1008+1854dupAATAGAATAGAA	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
CALCOCO2_chr17_48826035_48870245	48861659	G G	GTATATAT others(5): Show GTATATATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01255.hp2 HG04204.hp2 others(1): Show HG00741.hp1 HG01255.hp2 HG04204.hp2 NA19043.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0010 a0004c0004t0003 a0004c0004t0010	a0004c0004t0003g0078 a0004c0004t0003g0093 a0004c0004t0003g0094 others(1): Show a0004c0004t0003g0078 a0004c0004t0003g0093 a0004c0004t0003g0094 a0004c0004t0010g0083	4	328	0.0122	12	c.114 others(29): Show c.1145-616_1145-615insATATATATATAT	CALCOCO2	ENSG00000136436.15	transcript	ENST00000258947.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr17	TogoVar
CALCRL_chr2_187336964_187453252	187351284	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02015.hp2 HG03471.hp2 others(4): Show HG01433.hp2 HG02015.hp2 HG03471.hp2 NA18968.hp1 NA19043.hp1 NA19060.hp1 NA19075.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 others(1): Show a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 a0003c0004t0004	a0001c0001t0004g0156 a0001c0001t0004g0183 a0001c0001t0004g0189 others(4): Show a0001c0001t0004g0156 a0001c0001t0004g0183 a0001c0001t0004g0189 a0001c0001t0004g0191 a0001c0001t0008g0025 a0001c0001t0011g0264 a0003c0004t0004g0187	7	344	0.0204	12	c.117 others(29): Show c.1170+624_1170+635dupTTTTTTTTTTTT	CALCRL	ENSG00000064989.13	transcript	ENST00000392370.8	protein_coding	14/14			chr2	TogoVar
CALCRL_chr2_187336964_187453252	187366918	C C	CCACACAC others(5): Show CCACACACACACA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0221 a0001c0001t0002g0221	1	344	0.0029	12	c.501 others(29): Show c.501-3417_501-3416insTGTGTGTGTGTG	CALCRL	ENSG00000064989.13	transcript	ENST00000392370.8	protein_coding	8/14			chr2	TogoVar
CALCRL_chr2_187336964_187453252	187448596	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18947.hp1 NA19054.hp1 NA18947.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0231 a0001c0001t0002g0234 a0001c0001t0002g0231 a0001c0001t0002g0234	2	344	0.0058	12	c.-85 others(21): Show c.-851_-850insACACACACACAC	CALCRL	ENSG00000064989.13	transcript	ENST00000392370.8	protein_coding		345		chr2	TogoVar
CALCR_chr7_93419486_93579724	93454916	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG01928.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0106 a0001c0001t0023g0106	1	292	0.0034	12	c.648 others(29): Show c.648+5893_648+5904dupCACACACACACA	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	8/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93460572	A A	AAAATATA others(5): Show AAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG03579.hp1 HG01361.hp1 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0011 a0002c0002t0001 a0001c0001t0011 a0002c0002t0001	a0001c0001t0011g0274 a0002c0002t0001g0275 a0001c0001t0011g0274 a0002c0002t0001g0275	2	292	0.0069	12	c.648 others(27): Show c.648+248_648+249insATATATATATTT	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	8/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93460595	A A	ATATATAT others(5): Show ATATATATATATG	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02630.hp1 HG02622.hp2 HG02630.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0223 a0001c0003t0002g0224 a0001c0003t0002g0223 a0001c0003t0002g0224	2	292	0.0069	12	c.648 others(27): Show c.648+225_648+226insCATATATATATA	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	8/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93468823	T T	TAAACAAA others(5): Show TAAACAAACAAAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(102): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp1 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02074.hp2 HG02145.hp2 HG02165.hp1 HG02258.hp2 HG02486.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02738.hp1 HG02886.hp1 HG02922.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03225.hp1 HG03225.hp2 HG03490.hp1 HG03579.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18952.hp1 NA18957.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18964.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18979.hp1 NA18981.hp2 NA18984.hp1 NA18984.hp2 NA18991.hp1 NA19000.hp1 NA19001.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19043.hp1 NA19054.hp1 NA19056.hp2 NA19057.hp2 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19077.hp2 NA19080.hp1 NA19084.hp1 NA19085.hp2 NA19090.hp1 NA20752.hp1 NA20752.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0006 others(1): Show a0001c0001 a0001c0005 a0001c0006 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0005t0003 a0001c0005t0006 a0001c0006t0009 a0002c0002t0001 a0002c0002t0007 a0002c0002t0017 a0002c0002t0022	a0001c0001t0001g0040 a0001c0001t0001g0073 a0001c0001t0001g0083 others(101): Show a0001c0001t0001g0040 a0001c0001t0001g0073 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0099 a0001c0001t0001g0160 a0001c0001t0001g0171 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0191 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0212 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0233 a0001c0001t0001g0240 a0001c0001t0003g0024 a0001c0001t0003g0026 a0001c0001t0003g0028 a0001c0001t0003g0032 a0001c0001t0003g0038 a0001c0001t0003g0044 a0001c0001t0003g0050 a0001c0001t0003g0062 a0001c0001t0003g0064 a0001c0001t0003g0076 a0001c0001t0003g0082 a0001c0001t0003g0086 a0001c0001t0003g0148 a0001c0001t0003g0189 a0001c0001t0003g0192 a0001c0001t0003g0201 a0001c0001t0003g0234 a0001c0001t0003g0235 a0001c0001t0003g0238 a0001c0001t0003g0241 a0001c0001t0005g0030 a0001c0001t0005g0085 a0001c0001t0005g0155 a0001c0001t0005g0175 a0001c0001t0005g0181 a0001c0001t0005g0209 a0001c0001t0010g0193 a0001c0001t0011g0274 a0001c0001t0012g0088 a0001c0005t0003g0003 a0001c0005t0003g0196 a0001c0005t0003g0197 a0001c0005t0006g0043 a0001c0006t0009g0215 a0002c0002t0001g0025 a0002c0002t0001g0056 a0002c0002t0001g0065 a0002c0002t0001g0130 a0002c0002t0001g0147 a0002c0002t0001g0154 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0001g0167 a0002c0002t0001g0168 a0002c0002t0001g0174 a0002c0002t0001g0176 a0002c0002t0001g0178 a0002c0002t0001g0179 a0002c0002t0001g0185 a0002c0002t0001g0186 a0002c0002t0001g0187 a0002c0002t0001g0188 a0002c0002t0001g0190 a0002c0002t0001g0199 a0002c0002t0001g0200 a0002c0002t0001g0203 a0002c0002t0001g0205 a0002c0002t0001g0208 a0002c0002t0001g0214 a0002c0002t0001g0227 a0002c0002t0001g0230 a0002c0002t0001g0232 a0002c0002t0001g0239 a0002c0002t0001g0248 a0002c0002t0001g0251 a0002c0002t0001g0252 a0002c0002t0001g0253 a0002c0002t0001g0257 a0002c0002t0001g0258 a0002c0002t0001g0262 a0002c0002t0001g0273 a0002c0002t0001g0275 a0002c0002t0001g0287 a0002c0002t0007g0011 a0002c0002t0007g0012 a0002c0002t0007g0013 a0002c0002t0007g0017 a0002c0002t0007g0018 a0002c0002t0007g0019 a0002c0002t0017g0250 a0002c0002t0022g0020	105	292	0.3596	12	c.430 others(25): Show c.430-29_430-18dupGTTTGTTTGTTT	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	6/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93477961	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0069 a0001c0001t0002g0069	1	292	0.0034	12	c.206 others(27): Show c.206-305_206-294dupTTTTTTTTTTTT	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	4/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93488582	G G	GCAAAAAA others(5): Show GCAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0225	1	292	0.0034	12	c.-26 others(29): Show c.-26-1576_-26-1575insTTTTTTTTTTTG	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93548839	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18964.hp1 NA19057.hp1 NA18951.hp1 NA18964.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 a0001c0001t0001 a0001c0001t0003 a0001c0001t0025	a0001c0001t0001g0103 a0001c0001t0003g0087 a0001c0001t0025g0133 a0001c0001t0001g0103 a0001c0001t0003g0087 a0001c0001t0025g0133	3	292	0.0103	12	c.-27 others(31): Show c.-27+25438_-27+25449dupACACACACACAC	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93550598	A A	AACACACA others(5): Show AACACACACACAC	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp1 HG01884.hp2 others(14): Show HG01243.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02258.hp2 HG02486.hp2 HG02572.hp2 HG02622.hp1 HG02630.hp2 HG02965.hp1 HG02970.hp2 HG03225.hp1 HG03471.hp1 HG03486.hp2 NA18522.hp1 NA19068.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0002 others(2): Show a0001c0001 a0001c0006 a0002c0002 a0002c0004 a0002c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0006t0009 a0002c0002t0001 a0002c0002t0007 a0002c0002t0008 a0002c0004t0001 a0002c0010t0002	a0001c0001t0001g0077 a0001c0001t0001g0278 a0001c0001t0002g0268 others(14): Show a0001c0001t0001g0077 a0001c0001t0001g0278 a0001c0001t0002g0268 a0001c0001t0004g0261 a0001c0001t0012g0100 a0001c0001t0013g0276 a0001c0001t0015g0008 a0001c0006t0009g0215 a0001c0006t0009g0284 a0002c0002t0001g0142 a0002c0002t0001g0214 a0002c0002t0001g0285 a0002c0002t0001g0287 a0002c0002t0007g0011 a0002c0002t0008g0007 a0002c0004t0001g0283 a0002c0010t0002g0023	17	292	0.0582	12	c.-27 others(31): Show c.-27+23679_-27+23690dupGTGTGTGTGTGT	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93550640	C C	CACACACA others(5): Show CACACACACACAT	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0150 a0002c0002t0021g0150	1	292	0.0034	12	c.-27 others(31): Show c.-27+23648_-27+23649insATGTGTGTGTGT	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93554769	G G	GTATATAT others(5): Show GTATATATATATA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02451.hp2 HG02615.hp1 others(6): Show HG02145.hp2 HG02451.hp2 HG02615.hp1 HG02717.hp2 HG02886.hp1 HG02976.hp1 HG03225.hp2 HG03516.hp2 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0002c0002 a0001c0001 a0001c0008 a0002c0002	a0001c0001t0001 a0001c0001t0011 a0001c0008t0016 others(1): Show a0001c0001t0001 a0001c0001t0011 a0001c0008t0016 a0002c0002t0001	a0001c0001t0001g0163 a0001c0001t0001g0225 a0001c0001t0001g0226 others(6): Show a0001c0001t0001g0163 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0011g0166 a0001c0008t0016g0165 a0002c0002t0001g0218 a0002c0002t0001g0219 a0002c0002t0001g0227 a0002c0002t0001g0273	9	292	0.0308	12	c.-27 others(31): Show c.-27+19508_-27+19519dupTATATATATATA	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALCR_chr7_93419486_93579724	93568509	T T	TTCTCTCT others(5): Show TTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01074.hp2 HG01243.hp1 others(14): Show HG00741.hp1 HG01074.hp2 HG01243.hp1 HG01515.hp1 HG02004.hp2 HG02132.hp1 HG02717.hp2 HG02970.hp2 HG03195.hp1 HG03225.hp1 HG03579.hp2 HG03834.hp2 NA18973.hp2 NA19003.hp1 NA19007.hp2 NA19030.hp1 NA19077.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 others(14): Show a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0157 a0001c0001t0002g0112 a0001c0001t0002g0268 a0001c0001t0003g0108 a0001c0001t0011g0166 a0002c0002t0001g0141 a0002c0002t0001g0142 a0002c0002t0001g0161 a0002c0002t0001g0287 a0002c0002t0002g0107 a0002c0002t0002g0151 a0002c0002t0002g0246 a0002c0002t0002g0263 a0002c0002t0002g0264	17	292	0.0582	12	c.-27 others(29): Show c.-27+5768_-27+5779dupGAGAGAGAGAGA	CALCR	ENSG00000004948.16	transcript	ENST00000426151.7	protein_coding	2/13			chr7	TogoVar
CALD1_chr7_134774634_134975729	134790082	G G	GGAGAGAG others(5): Show GGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0040	1	262	0.0038	12	c.-13 others(33): Show c.-130+10346_-130+10357dupGAGAGAGAGAGA	CALD1	ENSG00000122786.20	transcript	ENST00000361675.7	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CALD1_chr7_134774634_134975729	134929644	G G	GTATATAT others(5): Show GTATATATATATA	intron_variant intron_variant	MODIFIER	NA18959.hp2 NA18981.hp1 NA18959.hp2 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0187 a0001c0001t0001g0125 a0001c0001t0001g0187	2	262	0.0076	12	c.218 others(27): Show c.218+745_218+746insATATATATATAT	CALD1	ENSG00000122786.20	transcript	ENST00000361675.7	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CALD1_chr7_134774634_134975729	134958872	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0207	1	262	0.0038	12	c.206 others(29): Show c.2061+609_2061+620dupATATATATATAT	CALD1	ENSG00000122786.20	transcript	ENST00000361675.7	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CALD1_chr7_134774634_134975729	134958889	A A	ATATATAT others(5): Show ATATATATTTAAC	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02723.hp2 HG02965.hp2 others(3): Show HG02559.hp2 HG02723.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0007 a0001c0001t0005g0063 a0001c0001t0005g0071 others(3): Show a0001c0001t0005g0007 a0001c0001t0005g0063 a0001c0001t0005g0071 a0001c0001t0005g0103 a0001c0001t0005g0242 a0001c0001t0005g0247	6	262	0.0229	12	c.206 others(29): Show c.2061+606_2061+607insTTAACTATATAT	CALD1	ENSG00000122786.20	transcript	ENST00000361675.7	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CALHM1_chr10_103448240_103463900	103451642	C C	CAGGAGGA others(5): Show CAGGAGGAGGAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02622.hp2 HG03041.hp1 others(3): Show HG01243.hp1 HG02622.hp2 HG03041.hp1 HG03098.hp1 HG03225.hp1 HG03486.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0005c0006 a0001c0002 a0005c0006	a0001c0002t0029 a0005c0006t0005 a0001c0002t0029 a0005c0006t0005	a0001c0002t0029g0039 a0005c0006t0005g0028 a0005c0006t0005g0074 a0001c0002t0029g0039 a0005c0006t0005g0028 a0005c0006t0005g0074	6	462	0.0130	12	c.36 others(23): Show c.3608_*3619dupCCTCCTCCTCCT	CALHM1	ENSG00000185933.7	transcript	ENST00000329905.6	protein_coding		1597		chr10	TogoVar
CALHM1_chr10_103448240_103463900	103451675	G G	GAGGAGGA others(5): Show GAGGAGGAGGAGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00558.hp1 others(45): Show HG00423.hp1 HG00438.hp2 HG00558.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01109.hp2 HG01123.hp1 HG01255.hp2 HG01433.hp2 HG01981.hp1 HG02027.hp2 HG02055.hp1 HG02135.hp2 HG02300.hp2 HG02717.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG03041.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03942.hp2 HG04184.hp2 HG04228.hp1 NA18941.hp1 NA18949.hp2 NA18950.hp2 NA18960.hp2 NA18961.hp1 NA18963.hp1 NA18965.hp2 NA18974.hp2 NA18984.hp1 NA18988.hp2 NA18995.hp2 NA19005.hp1 NA19011.hp1 NA19086.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009	a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 others(12): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0017 a0001c0001t0021 a0001c0001t0034 a0001c0002t0001 a0001c0002t0002 a0001c0002t0013 a0001c0002t0028 a0002c0003t0007 a0002c0003t0010 a0002c0009t0007	a0001c0001t0005g0016 a0001c0001t0005g0031 a0001c0001t0006g0013 others(19): Show a0001c0001t0005g0016 a0001c0001t0005g0031 a0001c0001t0006g0013 a0001c0001t0008g0011 a0001c0001t0008g0019 a0001c0001t0009g0012 a0001c0001t0011g0050 a0001c0001t0017g0025 a0001c0001t0021g0049 a0001c0001t0034g0099 a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0002g0002 a0001c0002t0013g0014 a0001c0002t0028g0038 a0002c0003t0007g0005 a0002c0003t0007g0055 a0002c0003t0007g0056 a0002c0003t0010g0010 a0002c0003t0010g0027 a0002c0003t0010g0057 a0002c0009t0007g0053	48	462	0.1039	12	c.35 others(23): Show c.3586_*3587insACTCCTCCTCCT	CALHM1	ENSG00000185933.7	transcript	ENST00000329905.6	protein_coding		1564		chr10	TogoVar
CALHM1_chr10_103448240_103463900	103460951	A A	AAATAATA others(5): Show AAATAATAATAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG01099.hp2 others(6): Show HG00639.hp1 HG00735.hp1 HG01099.hp2 HG01515.hp1 HG01517.hp2 HG02735.hp2 HG03017.hp2 NA18954.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0022 a0001c0001t0039	a0001c0001t0003g0003 a0001c0001t0005g0045 a0001c0001t0006g0007 others(3): Show a0001c0001t0003g0003 a0001c0001t0005g0045 a0001c0001t0006g0007 a0001c0001t0006g0080 a0001c0001t0022g0035 a0001c0001t0039g0089	9	462	0.0195	12	c.-22 others(23): Show c.-2201_-2200insATTATTATTATT	CALHM1	ENSG00000185933.7	transcript	ENST00000329905.6	protein_coding		2052		chr10	TogoVar
CALHM2_chr10_103441786_103457370	103451642	C C	CAGGAGGA others(5): Show CAGGAGGAGGAGG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02622.hp2 HG03041.hp2 others(3): Show HG01243.hp1 HG02622.hp2 HG03041.hp2 HG03098.hp1 HG03225.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0014 a0001c0002t0001g0068 a0001c0001t0001g0014 a0001c0002t0001g0068	6	458	0.0131	12	c.-36 others(29): Show c.-361-369_-361-358dupCCTCCTCCTCCT	CALHM2	ENSG00000138172.11	transcript	ENST00000260743.10	protein_coding	1/3			chr10	TogoVar
CALHM2_chr10_103441786_103457370	103451675	G G	GAGGAGGA others(5): Show GAGGAGGAGGAGT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00558.hp1 others(46): Show HG00423.hp1 HG00438.hp2 HG00558.hp1 HG00609.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01109.hp2 HG01123.hp2 HG01255.hp2 HG01433.hp2 HG01981.hp1 HG02027.hp1 HG02055.hp1 HG02135.hp1 HG02300.hp2 HG02717.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG03041.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03942.hp1 HG04184.hp1 HG04228.hp2 NA18941.hp1 NA18949.hp1 NA18950.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18965.hp2 NA18974.hp1 NA18976.hp1 NA18984.hp1 NA18988.hp2 NA18995.hp2 NA19005.hp2 NA19011.hp2 NA19086.hp1 NA20805.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0008 a0001c0001 a0001c0002 a0004c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0002t0001 a0001c0002t0006 a0004c0008t0001	a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0030 others(8): Show a0001c0001t0001g0004 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0044 a0001c0001t0003g0027 a0001c0001t0007g0043 a0001c0002t0001g0012 a0001c0002t0001g0045 a0001c0002t0006g0029 a0004c0008t0001g0046	49	458	0.1070	12	c.-36 others(29): Show c.-361-391_-361-390insACTCCTCCTCCT	CALHM2	ENSG00000138172.11	transcript	ENST00000260743.10	protein_coding	1/3			chr10	TogoVar
CALHM4_chr6_116548751_116566127	116550025	T T	TATATATA others(5): Show TATATATACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0037 a0001c0001t0044g0037	1	408	0.0025	12	c.-37 others(23): Show c.-3769_-3768insATATATACACAC	CALHM4	ENSG00000164451.14	transcript	ENST00000368596.4	protein_coding		3725		chr6	TogoVar
CALHM5_chr6_116506639_116529788	116511183	G G	GATATATA others(5): Show GATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG02630.hp2 HG04204.hp1 others(9): Show HG00738.hp2 HG02630.hp2 HG04204.hp1 NA18949.hp2 NA18956.hp2 NA18957.hp1 NA18966.hp2 NA18989.hp2 NA19004.hp1 NA19072.hp1 NA19080.hp2 NA19083.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0006 a0001c0001t0019 others(6): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0019 a0001c0001t0053 a0001c0001t0106 a0001c0001t0110 a0001c0001t0117 a0001c0001t0126 a0002c0002t0157	a0001c0001t0002g0002 a0001c0001t0006g0010 a0001c0001t0019g0002 others(6): Show a0001c0001t0002g0002 a0001c0001t0006g0010 a0001c0001t0019g0002 a0001c0001t0053g0002 a0001c0001t0106g0002 a0001c0001t0110g0002 a0001c0001t0117g0002 a0001c0001t0126g0002 a0002c0002t0157g0002	12	402	0.0299	12	c.-51 others(21): Show c.-514_-513insATATATATATAT	CALHM5	ENSG00000178033.6	transcript	ENST00000368599.4	protein_coding		455		chr6	TogoVar
CALM1_chr14_90392029_90413268	90397075	T T	TCAGGCGG others(5): Show TCAGGCGGCGGCG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0022 a0001c0001t0019g0094 a0001c0001t0019g0022 a0001c0001t0019g0094	2	408	0.0049	12	c.-14 others(21): Show c.-143_-132dupCAGGCGGCGGCG	CALM1	ENSG00000198668.14	transcript	ENST00000356978.9	protein_coding	1/6	131	INFO_REALIGN_3_PRIME	chr14	TogoVar
CALM1_chr14_90392029_90413268	90412446	T T	TTTAATTA others(5): Show TTTAATTAATTAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01952.hp2 NA18981.hp2 HG01952.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0005 a0001c0001t0004g0069 a0001c0001t0002g0005 a0001c0001t0004g0069	2	408	0.0049	12	c.77 others(23): Show c.7729_*7730insTTAATTAATTAA	CALM1	ENSG00000198668.14	transcript	ENST00000356978.9	protein_coding		4179		chr14	TogoVar
CALM2_chr2_47155084_47181511	47167693	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02083.hp2 NA18945.hp2 NA18952.hp1 others(2): Show HG02083.hp2 NA18945.hp2 NA18952.hp1 NA18993.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0118 a0001c0001t0001g0136 others(2): Show a0001c0001t0001g0094 a0001c0001t0001g0118 a0001c0001t0001g0136 a0001c0001t0001g0262 a0001c0001t0001g0359	5	432	0.0116	12	c.34+ others(27): Show c.34+3029_34+3040dupTTTTTTTTTTTT	CALM2	ENSG00000143933.20	transcript	ENST00000272298.12	protein_coding	2/5			chr2	TogoVar
CALM2_chr2_47155084_47181511	47167814	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01071.hp1 NA18959.hp1 others(10): Show HG01069.hp2 HG01071.hp1 NA18959.hp1 NA18997.hp1 NA19000.hp2 NA19005.hp1 NA19005.hp2 NA19012.hp2 NA19059.hp1 NA19060.hp1 NA19067.hp2 NA19076.hp1 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0101 a0001c0001t0001g0105 others(9): Show a0001c0001t0001g0030 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0113 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0156 a0001c0001t0001g0181 a0001c0001t0001g0194 a0001c0001t0001g0231 a0001c0001t0001g0272 a0001c0001t0001g0273	13	432	0.0301	12	c.34+ others(27): Show c.34+2919_34+2920insAAAAAAAAAAAA	CALM2	ENSG00000143933.20	transcript	ENST00000272298.12	protein_coding	2/5			chr2	TogoVar
CALM2_chr2_47155084_47181511	47175081	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02922.hp2 HG03130.hp2 others(2): Show HG02647.hp2 HG02922.hp2 HG03130.hp2 HG03516.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0331 a0001c0001t0001g0332 others(1): Show a0001c0001t0001g0031 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333	5	432	0.0116	12	c.3+1 others(25): Show c.3+1348_3+1359dupAAAAAAAAAAAA	CALM2	ENSG00000143933.20	transcript	ENST00000272298.12	protein_coding	1/5			chr2	TogoVar
CALM2_chr2_47155084_47181511	47175097	T T	TTTTTTTT others(5): Show TTTTTTTTTTTCC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02145.hp1 HG02630.hp2 others(5): Show HG01243.hp2 HG02145.hp1 HG02630.hp2 HG02895.hp1 HG02976.hp2 HG03486.hp2 HG03579.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0313 others(5): Show a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0313 a0001c0001t0001g0373 a0001c0001t0001g0374 a0001c0001t0001g0375 a0001c0001t0001g0376 a0001c0001t0001g0377	8	432	0.0185	12	c.3+1 others(25): Show c.3+1343_3+1344insGGAAAAAAAAAA	CALM2	ENSG00000143933.20	transcript	ENST00000272298.12	protein_coding	1/5			chr2	TogoVar
CALM2_chr2_47155084_47181511	47175097	T T	TTTTTTTT others(5): Show TTTTTTTTTTTTC	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG02080.hp1 HG03710.hp1 others(2): Show HG01168.hp2 HG02080.hp1 HG03710.hp1 HG04199.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 others(2): Show a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0316	5	432	0.0116	12	c.3+1 others(25): Show c.3+1343_3+1344insGAAAAAAAAAAA	CALM2	ENSG00000143933.20	transcript	ENST00000272298.12	protein_coding	1/5			chr2	TogoVar

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