Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC158_chr4_76308039_76426141	76422725	C C	CCTCCCCC others(5): Show CCTCCCCCTCCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02809.hp1 HG02965.hp1 others(2): Show HG01109.hp2 HG02809.hp1 HG02965.hp1 HG03540.hp1 HG06807.hp1	a0003 a0007 a0015 a0003 a0007 a0015	a0003c0008 a0007c0024 a0015c0018 a0003c0008 a0007c0024 a0015c0018	a0003c0008t0005 a0007c0024t0004 a0015c0018t0009 a0003c0008t0005 a0007c0024t0004 a0015c0018t0009	a0003c0008t0005g0325 a0003c0008t0005g0326 a0003c0008t0005g0327 others(2): Show a0003c0008t0005g0325 a0003c0008t0005g0326 a0003c0008t0005g0327 a0007c0024t0004g0330 a0015c0018t0009g0333	5	348	0.0144	12	c.-18 others(23): Show c.-1878_-1877insAGGGAGGGGGAG	CCDC158	ENSG00000163749.18	transcript	ENST00000682701.1	protein_coding		1585		chr4	TogoVar
CCDC159_chr19_11341519_11359944	11356664	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	358	0.0028	12	c.17 others(23): Show c.1787_*1788insTGTGTGTGTGTG	CCDC159	ENSG00000183401.12	transcript	ENST00000458408.6	protein_coding		1721		chr19	TogoVar
CCDC15_chr11_124949202_125046489	124950083	A A	ACTTTCTT others(5): Show ACTTTCTTTCTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0083 a0002c0002t0013g0083	1	350	0.0029	12	c.-42 others(23): Show c.-4297_-4296insCTTTCTTTCTTT	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding		4118		chr11	TogoVar
CCDC15_chr11_124949202_125046489	124986700	T T	TGTGTGTG others(5): Show TGTGTGTGCGCGC	intron_variant intron_variant	MODIFIER	HG02622.hp1 NA18957.hp1 HG02622.hp1 NA18957.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0067 a0002c0002t0001g0101 a0002c0002t0001g0067 a0002c0002t0001g0101	2	350	0.0057	12	c.754 others(25): Show c.754-41_754-40insTGTGTGCGCGCG	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC15_chr11_124949202_125046489	124986700	T T	TGTGTGTG others(5): Show TGTGTGTGTGCGC	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02273.hp1 HG02809.hp1 others(3): Show HG00423.hp2 HG02273.hp1 HG02809.hp1 NA18950.hp2 NA18968.hp1 NA20129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0013 a0002c0002t0001 a0002c0002t0013	a0002c0002t0001g0042 a0002c0002t0001g0070 a0002c0002t0001g0084 others(3): Show a0002c0002t0001g0042 a0002c0002t0001g0070 a0002c0002t0001g0084 a0002c0002t0001g0094 a0002c0002t0001g0095 a0002c0002t0013g0083	6	350	0.0171	12	c.754 others(25): Show c.754-41_754-40insTGTGTGTGCGCG	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC15_chr11_124949202_125046489	124986700	T T	TGTGTGTG others(5): Show TGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG02818.hp2 NA18972.hp1 HG02818.hp2 NA18972.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0043 a0002c0002t0001g0074 a0002c0002t0001g0043 a0002c0002t0001g0074	2	350	0.0057	12	c.754 others(25): Show c.754-41_754-40insTGTGTGTGTGCG	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC15_chr11_124949202_125046489	125025045	A A	AATATATA others(5): Show AATATATATGAAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(152): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00438.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp2 HG00733.hp1 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp2 HG01168.hp2 HG01169.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01928.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01993.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02165.hp2 HG02258.hp2 HG02293.hp1 HG02300.hp2 HG02615.hp2 HG02622.hp2 HG02683.hp1 HG02698.hp2 HG02723.hp1 HG02738.hp2 HG03017.hp1 HG03098.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp2 NA18961.hp1 NA18966.hp2 NA18968.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA19002.hp1 NA19002.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19057.hp2 NA19062.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19074.hp2 NA19076.hp1 NA19077.hp1 NA19080.hp1 NA19083.hp1 NA19084.hp2 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp2	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0007	a0001c0001 a0001c0012 a0003c0003 others(2): Show a0001c0001 a0001c0012 a0003c0003 a0006c0009 a0007c0016	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(6): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0012t0002 a0003c0003t0005 a0006c0009t0003 a0007c0016t0012	a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 others(117): Show a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0129 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0185 a0001c0001t0002g0216 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0232 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0003g0005 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0130 a0001c0001t0003g0132 a0001c0001t0003g0159 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0186 a0001c0001t0003g0187 a0001c0001t0003g0188 a0001c0001t0003g0189 a0001c0001t0003g0190 a0001c0001t0003g0191 a0001c0001t0003g0192 a0001c0001t0003g0193 a0001c0001t0003g0194 a0001c0001t0003g0195 a0001c0001t0003g0196 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0206 a0001c0001t0003g0207 a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0214 a0001c0001t0003g0215 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0233 a0001c0001t0003g0234 a0001c0001t0003g0235 a0001c0001t0003g0287 a0001c0001t0005g0229 a0001c0001t0010g0151 a0001c0001t0010g0152 a0001c0001t0011g0028 a0001c0001t0011g0252 a0001c0012t0002g0010 a0003c0003t0005g0006 a0003c0003t0005g0014 a0003c0003t0005g0245 a0003c0003t0005g0246 a0006c0009t0003g0205 a0007c0016t0012g0028	155	350	0.4429	12	c.241 others(33): Show c.2412-13369_2412-13358dupATATGAATATAT	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC15_chr11_124949202_125046489	125041626	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 NA21309.hp1 HG02109.hp1 NA21309.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0005 a0003c0003t0005	a0003c0003t0005g0236 a0003c0003t0005g0239 a0003c0003t0005g0236 a0003c0003t0005g0239	2	350	0.0057	12	c.91 others(21): Show c.915_*916insAAAAAAAAAAAA	CCDC15	ENSG00000149548.15	transcript	ENST00000344762.6	protein_coding		138		chr11	TogoVar
CCDC160_chrX_134232182_134251842	134232964	G G	GAAAGAAA others(5): Show GAAAGAAAGAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp1 HG06807.hp2 HG02965.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0030 a0001c0001t0005g0030	2	311	0.0064	12	c.-44 others(23): Show c.-4495_-4494insAAAGAAAGAAAA	CCDC160	ENSG00000203952.10	transcript	ENST00000695460.1	protein_coding		4217		chrX	TogoVar
CCDC160_chrX_134232182_134251842	134232968	G G	GAGAAAGA others(5): Show GAGAAAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03492.hp1 NA19077.hp1 HG03492.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0001 a0001c0001t0001g0004	2	311	0.0064	12	c.-44 others(23): Show c.-4491_-4490insAGAAAGAAAGAA	CCDC160	ENSG00000203952.10	transcript	ENST00000695460.1	protein_coding		4213		chrX	TogoVar
CCDC160_chrX_134232182_134251842	134232968	G G	GAGAGAGA others(5): Show GAGAGAGAAAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	311	0.0032	12	c.-44 others(23): Show c.-4491_-4490insAGAGAGAAAGAA	CCDC160	ENSG00000203952.10	transcript	ENST00000695460.1	protein_coding		4213		chrX	TogoVar
CCDC160_chrX_134232182_134251842	134232968	G G	GAGAGAGA others(5): Show GAGAGAGAGAGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0010 a0001c0001t0003g0010	1	311	0.0032	12	c.-44 others(23): Show c.-4491_-4490insAGAGAGAGAGAA	CCDC160	ENSG00000203952.10	transcript	ENST00000695460.1	protein_coding		4213		chrX	TogoVar
CCDC160_chrX_134232182_134251842	134246004	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00423.hp1 NA18957.hp1 NA19009.hp1 others(2): Show HG00423.hp1 NA18957.hp1 NA19009.hp1 NA19059.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0028 a0001c0001t0008 a0001c0001t0028	a0001c0001t0008g0006 a0001c0001t0008g0008 a0001c0001t0008g0024 others(2): Show a0001c0001t0008g0006 a0001c0001t0008g0008 a0001c0001t0008g0024 a0001c0001t0008g0068 a0001c0001t0028g0042	5	311	0.0161	12	c.24 others(21): Show c.245_*256dupGTGTGTGTGTGT	CCDC160	ENSG00000203952.10	transcript	ENST00000695460.1	protein_coding	3/3	257	INFO_REALIGN_3_PRIME	chrX	TogoVar
CCDC166_chr8_143701694_143713109	143703903	T T	TTTATTAT others(5): Show TTTATTATTATTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG00642.hp1 HG01167.hp1 others(13): Show HG00558.hp1 HG00642.hp1 HG01167.hp1 HG01256.hp1 HG01258.hp1 HG02004.hp1 HG02148.hp2 HG02258.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG03239.hp1 NA18959.hp1 NA18960.hp2 NA18980.hp1 NA18982.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0000 a0005c0005t0000 a0001c0001t0000 a0005c0005t0000	a0001c0001t0000g0001 a0005c0005t0000g0005 a0001c0001t0000g0001 a0005c0005t0000g0005	16	423	0.0378	12	c.27 others(23): Show c.2779_*2790dupTAATAATAATAA	CCDC166	ENSG00000255181.3	transcript	ENST00000542437.1	protein_coding		2790		chr8	TogoVar
CCDC167_chr6_37477938_37504893	37494805	A A	ATTTTTTT others(5): Show ATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00642.hp2 HG00733.hp1 others(47): Show HG00639.hp2 HG00642.hp2 HG00733.hp1 HG00738.hp2 HG01074.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01361.hp1 HG02055.hp2 HG02080.hp2 HG02135.hp2 HG02486.hp1 HG02809.hp2 HG02895.hp1 HG02896.hp2 HG02970.hp1 HG02976.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp2 HG03688.hp2 HG03834.hp1 NA18522.hp1 NA18906.hp2 NA18939.hp2 NA18944.hp1 NA18945.hp1 NA18949.hp2 NA18952.hp1 NA18968.hp1 NA18978.hp2 NA18981.hp2 NA18983.hp2 NA18991.hp1 NA18995.hp1 NA18998.hp1 NA19001.hp2 NA19030.hp1 NA19030.hp2 NA19055.hp2 NA19065.hp2 NA19068.hp1 NA19074.hp1 NA19079.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0005 a0001c0001t0001g0011 a0001c0001t0001g0029 others(22): Show a0001c0001t0001g0005 a0001c0001t0001g0011 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0062 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0177 a0001c0001t0002g0067 a0001c0001t0004g0008 a0001c0001t0004g0069 a0001c0001t0004g0070 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0181	50	398	0.1256	12	c.42+ others(27): Show c.42+5005_42+5016dupAAAAAAAAAAAA	CCDC167	ENSG00000198937.9	transcript	ENST00000373408.4	protein_coding	1/3			chr6	TogoVar
CCDC168_chr13_102724367_102764072	102728023	A A	AAAATAAA others(5): Show AAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG01169.hp2 HG02300.hp1 others(1): Show HG00639.hp2 HG01169.hp2 HG02300.hp1 NA20752.hp1	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0001 a0008c0008t0001	a0008c0008t0001g0030 a0008c0008t0001g0174 a0008c0008t0001g0175 a0008c0008t0001g0030 a0008c0008t0001g0174 a0008c0008t0001g0175	4	360	0.0111	12	c.14 others(23): Show c.1427_*1428insATTTATTTATTT	CCDC168	ENSG00000175820.4	transcript	ENST00000322527.4	protein_coding		1343		chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285584	A A	AAGATAGA others(5): Show AAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01070.hp1 HG01261.hp2 others(21): Show HG00735.hp1 HG01070.hp1 HG01261.hp2 HG02055.hp2 HG02109.hp1 HG02165.hp2 HG02258.hp1 HG02559.hp1 HG02818.hp1 HG02896.hp2 HG02965.hp1 HG03139.hp1 HG03453.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03710.hp2 HG03834.hp1 NA18906.hp1 NA19030.hp2 NA19077.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0028 others(15): Show a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0028 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216	24	364	0.0659	12	c.164 others(29): Show c.164-1894_164-1883dupATCTATCTATCT	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285603	A A	ATAGATAG others(5): Show ATAGATAGATAGC	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02717.hp2 HG02818.hp2 HG02615.hp1 HG02717.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184	3	364	0.0082	12	c.164 others(29): Show c.164-1902_164-1901insGCTATCTATCTA	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285614	G G	GATAGATA others(5): Show GATAGATAGATAC	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG03041.hp1 HG03688.hp1 others(2): Show HG02015.hp1 HG03041.hp1 HG03688.hp1 HG03831.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0172 a0001c0001t0001g0173 others(1): Show a0001c0001t0001g0025 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0177	5	364	0.0137	12	c.164 others(29): Show c.164-1913_164-1912insGTATCTATCTAT	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285618	G G	GATACATA others(5): Show GATACATACATAC	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0289 a0002c0002t0003g0289	1	364	0.0028	12	c.164 others(29): Show c.164-1917_164-1916insGTATGTATGTAT	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285618	G G	GATAGATA others(5): Show GATAGATACATAC	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01123.hp2 HG02280.hp1 others(3): Show HG01069.hp1 HG01123.hp2 HG02280.hp1 NA18999.hp2 NA19070.hp2 NA19085.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0002 a0001c0004 a0002c0002	a0001c0004t0001 a0002c0002t0002 a0002c0002t0003 a0001c0004t0001 a0002c0002t0002 a0002c0002t0003	a0001c0004t0001g0280 a0002c0002t0002g0278 a0002c0002t0002g0279 others(3): Show a0001c0004t0001g0280 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0286 a0002c0002t0002g0287 a0002c0002t0003g0217	6	364	0.0165	12	c.164 others(29): Show c.164-1917_164-1916insGTATGTATCTAT	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC169_chr13_36225775_36302814	36285618	G G	GATAGATA others(5): Show GATAGATAGATAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp2 HG00408.hp2 others(63): Show HG00099.hp1 HG00323.hp2 HG00408.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp2 HG01074.hp2 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01257.hp2 HG01358.hp1 HG01981.hp1 HG01993.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02148.hp2 HG02155.hp2 HG02258.hp2 HG02300.hp1 HG02615.hp2 HG02683.hp2 HG02735.hp2 HG02809.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03688.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18946.hp2 NA18947.hp2 NA18949.hp2 NA18952.hp1 NA18955.hp2 NA18956.hp1 NA18962.hp1 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18988.hp2 NA18989.hp1 NA18999.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp2 NA19005.hp1 NA19010.hp2 NA19011.hp2 NA19062.hp2 NA19064.hp1 NA19066.hp2 NA19067.hp1 NA19074.hp1 NA19086.hp2 NA19091.hp1 NA20752.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0002 a0001c0004 a0002c0002	a0001c0004t0001 a0002c0002t0002 a0002c0002t0003 a0001c0004t0001 a0002c0002t0002 a0002c0002t0003	a0001c0004t0001g0015 a0001c0004t0001g0035 a0001c0004t0001g0221 others(47): Show a0001c0004t0001g0015 a0001c0004t0001g0035 a0001c0004t0001g0221 a0001c0004t0001g0240 a0001c0004t0001g0258 a0001c0004t0001g0259 a0001c0004t0001g0264 a0001c0004t0001g0265 a0001c0004t0001g0266 a0001c0004t0001g0285 a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0188 a0002c0002t0002g0218 a0002c0002t0002g0220 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0241 a0002c0002t0002g0242 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0247 a0002c0002t0002g0248 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0252 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0255 a0002c0002t0002g0256 a0002c0002t0002g0257 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0263 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0283 a0002c0002t0002g0284 a0002c0002t0003g0249	66	364	0.1813	12	c.164 others(29): Show c.164-1917_164-1916insGTATCTATCTAT	CCDC169	ENSG00000242715.8	transcript	ENST00000239859.8	protein_coding	2/7			chr13	TogoVar
CCDC170_chr6_151489017_151626193	151509207	C C	CATCTATC others(5): Show CATCTATCTATCT	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0005 a0003c0012t0005	a0003c0012t0005g0161 a0003c0012t0005g0161	1	320	0.0031	12	c.57+ others(29): Show c.57+15025_57+15036dupCTATCTATCTAT	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCDC170_chr6_151489017_151626193	151509222	G G	GTATCTAT others(5): Show GTATCTATCTATC	intron_variant intron_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0070 a0001c0001t0003g0070	1	320	0.0031	12	c.57+ others(29): Show c.57+15065_57+15076dupCTATCTATCTAT	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCDC170_chr6_151489017_151626193	151526069	G G	GTCCTTCC others(5): Show GTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03579.hp2 HG03139.hp1 HG03579.hp2	a0006 a0010 a0006 a0010	a0006c0027 a0010c0020 a0006c0027 a0010c0020	a0006c0027t0008 a0010c0020t0034 a0006c0027t0008 a0010c0020t0034	a0006c0027t0008g0087 a0010c0020t0034g0146 a0006c0027t0008g0087 a0010c0020t0034g0146	2	320	0.0063	12	c.58- others(29): Show c.58-10235_58-10224dupCCTTCCTTCCTT	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCDC170_chr6_151489017_151626193	151572649	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0065 a0001c0005t0065	a0001c0005t0065g0212 a0001c0005t0065g0212	1	320	0.0031	12	c.775 others(27): Show c.775-516_775-505dupTTTTTTTTTTTT	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCDC170_chr6_151489017_151626193	151572652	T T	TTTTTTTT others(5): Show TTTTTTTTTTTTG	intron_variant intron_variant	MODIFIER	NA18994.hp1 NA18994.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0006 a0003c0004t0006	a0003c0004t0006g0292 a0003c0004t0006g0292	1	320	0.0031	12	c.775 others(27): Show c.775-511_775-510insGTTTTTTTTTTT	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCDC170_chr6_151489017_151626193	151623087	G G	GACACACA others(5): Show GACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0006 a0006	a0006c0011 a0006c0011	a0006c0011t0002 a0006c0011t0002	a0006c0011t0002g0082 a0006c0011t0002g0082	1	320	0.0031	12	c.49 others(23): Show c.4940_*4941insACACACACACAC	CCDC170	ENSG00000120262.10	transcript	ENST00000239374.8	protein_coding		1895		chr6	TogoVar
CCDC171_chr9_15548043_15979037	15552270	G G	GGTGTGTG others(5): Show GGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00597.hp1 HG01496.hp1 others(5): Show HG00558.hp1 HG00597.hp1 HG01496.hp1 HG01993.hp1 NA18940.hp2 NA19000.hp2 NA19003.hp2 NA19080.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0010	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0010c0011	a0001c0001t0001 a0002c0002t0002 a0002c0002t0011 others(2): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0011 a0003c0003t0002 a0010c0011t0001	a0001c0001t0001g0010 a0002c0002t0002g0085 a0002c0002t0002g0087 others(5): Show a0001c0001t0001g0010 a0002c0002t0002g0085 a0002c0002t0002g0087 a0002c0002t0002g0113 a0002c0002t0002g0142 a0002c0002t0011g0134 a0003c0003t0002g0021 a0010c0011t0001g0057	8	266	0.0301	12	c.-11 others(23): Show c.-1144_-1143insGTGTGTGTGTGT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding		772		chr9	TogoVar
CCDC171_chr9_15548043_15979037	15590771	C C	CTCTTTCT others(5): Show CTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02040.hp1 HG02074.hp1 others(2): Show HG00741.hp2 HG02040.hp1 HG02074.hp1 HG02630.hp2 NA19077.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0001c0001t0023 a0005c0005t0005 others(1): Show a0001c0001t0001 a0001c0001t0023 a0005c0005t0005 a0005c0005t0029	a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0023g0022 others(2): Show a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0023g0022 a0005c0005t0005g0251 a0005c0005t0029g0241	5	266	0.0188	12	c.353 others(27): Show c.353-542_353-531dupTCTTTCTTTCTT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	4/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15610444	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0003	a0004c0004t0003g0030 a0004c0004t0003g0030	1	266	0.0038	12	c.676 others(31): Show c.676-12797_676-12786dupAAAAAAAAAAAA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	6/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15623463	A A	ACGCGCGC others(5): Show ACGCGCGCGCGCG	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0104 a0002c0002t0002g0104	1	266	0.0038	12	c.822 others(25): Show c.822+50_822+51insCGCGCGCGCGCG	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25			chr9	TogoVar
CCDC171_chr9_15548043_15979037	15623469	G G	GCACACAC others(5): Show GCACACACACACA	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0139 a0003c0003t0001g0139	1	266	0.0038	12	c.822 others(25): Show c.822+57_822+58insACACACACACAC	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15623475	G G	GCACACAC others(5): Show GCACACACACACA	intron_variant intron_variant	MODIFIER	HG01258.hp2 HG01433.hp1 HG02027.hp2 others(16): Show HG01258.hp2 HG01433.hp1 HG02027.hp2 HG02145.hp2 HG02258.hp1 HG02293.hp1 HG02698.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG03239.hp2 HG03516.hp2 NA18940.hp2 NA18945.hp1 NA18994.hp1 NA19054.hp1 NA19064.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0007 a0001c0001 a0007c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 a0007c0007t0005	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(16): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0024 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0200 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0004g0166 a0001c0001t0004g0192 a0001c0001t0012g0211 a0007c0007t0005g0059 a0007c0007t0005g0060 a0007c0007t0005g0061 a0007c0007t0005g0062	19	266	0.0714	12	c.822 others(25): Show c.822+83_822+94dupCACACACACACA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15623475	G G	GCGCACAC others(5): Show GCGCACACACACA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0005 a0005c0005t0005	a0005c0005t0005g0245 a0005c0005t0005g0245	1	266	0.0038	12	c.822 others(25): Show c.822+63_822+64insGCACACACACAC	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15623475	G G	GCGCGCAC others(5): Show GCGCGCACACACA	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG03490.hp1 NA18978.hp1 HG01516.hp1 HG03490.hp1 NA18978.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0101 a0002c0002t0002g0105 a0002c0002t0002g0106 a0002c0002t0002g0101 a0002c0002t0002g0105 a0002c0002t0002g0106	3	266	0.0113	12	c.822 others(25): Show c.822+63_822+64insGCGCACACACAC	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15642344	T T	TATATATA others(5): Show TATATATATATAC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0007 a0003c0003t0007	a0003c0003t0007g0263 a0003c0003t0007g0263	1	266	0.0038	12	c.823 others(31): Show c.823-14772_823-14771insCATATATATATA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15664567	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00423.hp2 others(48): Show HG00140.hp2 HG00323.hp2 HG00423.hp2 HG00544.hp1 HG00597.hp2 HG00673.hp2 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01106.hp1 HG01257.hp2 HG01346.hp1 HG01433.hp1 HG01496.hp2 HG01884.hp2 HG02040.hp1 HG02080.hp1 HG02129.hp2 HG02145.hp2 HG02273.hp1 HG02280.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02698.hp1 HG02735.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG03017.hp2 HG03239.hp1 HG03486.hp2 HG03704.hp1 HG04199.hp2 HG04204.hp1 NA18906.hp2 NA18948.hp2 NA18950.hp1 NA18953.hp2 NA18965.hp2 NA18971.hp1 NA18978.hp2 NA18980.hp2 NA19007.hp2 NA19068.hp1 NA19077.hp2 NA19091.hp2 NA19240.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 a0001c0001t0015 a0001c0001t0019 a0003c0003t0002 a0003c0003t0008	a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0160 others(48): Show a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0182 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0215 a0001c0001t0001g0223 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0231 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0008g0222 a0001c0001t0012g0211 a0001c0001t0012g0212 a0001c0001t0012g0213 a0001c0001t0015g0233 a0001c0001t0019g0190 a0003c0003t0002g0201 a0003c0003t0008g0225	51	266	0.1917	12	c.916 others(29): Show c.916-1585_916-1574dupACACACACACAC	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	8/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15677879	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02602.hp1 NA20905.hp1 HG02027.hp2 HG02602.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0014 a0001c0001t0001g0158 a0001c0001t0004g0151 a0001c0001t0001g0014 a0001c0001t0001g0158 a0001c0001t0004g0151	3	266	0.0113	12	c.107 others(29): Show c.1077-843_1077-832dupTATATATATATA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	9/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15691541	G G	GATATATA others(5): Show GATATATATATAT	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03669.hp1 NA18522.hp2 others(3): Show HG03453.hp1 HG03669.hp1 NA18522.hp2 NA18945.hp2 NA18983.hp1 NA20905.hp2	a0002 a0004 a0006 a0002 a0004 a0006	a0002c0002 a0004c0004 a0006c0006 a0002c0002 a0004c0004 a0006c0006	a0002c0002t0002 a0004c0004t0003 a0006c0006t0003 a0002c0002t0002 a0004c0004t0003 a0006c0006t0003	a0002c0002t0002g0108 a0004c0004t0003g0027 a0004c0004t0003g0030 others(3): Show a0002c0002t0002g0108 a0004c0004t0003g0027 a0004c0004t0003g0030 a0004c0004t0003g0040 a0006c0006t0003g0034 a0006c0006t0003g0055	6	266	0.0226	12	c.121 others(31): Show c.1216-3694_1216-3693insATATATATATAT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	10/25			chr9	TogoVar
CCDC171_chr9_15548043_15979037	15691542	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02723.hp1 HG02965.hp2 others(2): Show HG02486.hp1 HG02723.hp1 HG02965.hp2 HG03139.hp1 HG03195.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0006 a0003c0003t0007 a0003c0003t0004 a0003c0003t0006 a0003c0003t0007	a0003c0003t0004g0146 a0003c0003t0006g0266 a0003c0003t0007g0261 others(2): Show a0003c0003t0004g0146 a0003c0003t0006g0266 a0003c0003t0007g0261 a0003c0003t0007g0262 a0003c0003t0007g0264	5	266	0.0188	12	c.121 others(31): Show c.1216-3692_1216-3691insATATATATATAT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	10/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15691544	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp1 HG01257.hp2 others(13): Show HG00323.hp2 HG01099.hp1 HG01257.hp2 HG01346.hp1 HG01433.hp1 HG01884.hp2 HG02027.hp2 HG02074.hp1 HG02080.hp1 HG02273.hp1 HG02280.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG04204.hp1 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0012 a0001c0001t0015 a0001c0001t0023 a0003c0003t0002	a0001c0001t0001g0014 a0001c0001t0001g0162 a0001c0001t0001g0163 others(13): Show a0001c0001t0001g0014 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0172 a0001c0001t0001g0198 a0001c0001t0001g0203 a0001c0001t0001g0208 a0001c0001t0001g0234 a0001c0001t0008g0222 a0001c0001t0012g0211 a0001c0001t0012g0212 a0001c0001t0012g0213 a0001c0001t0015g0233 a0001c0001t0023g0022 a0003c0003t0002g0201	16	266	0.0602	12	c.121 others(31): Show c.1216-3690_1216-3689insATATATATATAT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	10/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15705091	G G	GACACACA others(5): Show GACACACACACAC	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00558.hp1 others(26): Show HG00423.hp1 HG00438.hp2 HG00558.hp1 HG00642.hp2 HG01070.hp1 HG01081.hp1 HG01099.hp2 HG01192.hp1 HG01496.hp1 HG01981.hp1 HG02080.hp2 HG02129.hp1 HG02273.hp2 HG03453.hp1 HG03516.hp1 HG03654.hp1 NA18942.hp1 NA18946.hp1 NA18950.hp2 NA18966.hp1 NA18978.hp1 NA18986.hp1 NA19000.hp1 NA19007.hp1 NA19054.hp2 NA19058.hp1 NA19064.hp2 NA19068.hp2 NA19091.hp1	a0002 a0003 a0006 others(1): Show a0002 a0003 a0006 a0009	a0002c0002 a0003c0003 a0006c0006 others(1): Show a0002c0002 a0003c0003 a0006c0006 a0009c0012	a0002c0002t0002 a0002c0002t0011 a0003c0003t0002 others(2): Show a0002c0002t0002 a0002c0002t0011 a0003c0003t0002 a0006c0006t0003 a0009c0012t0002	a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0076 others(26): Show a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0076 a0002c0002t0002g0078 a0002c0002t0002g0087 a0002c0002t0002g0095 a0002c0002t0002g0097 a0002c0002t0002g0098 a0002c0002t0002g0101 a0002c0002t0002g0109 a0002c0002t0002g0111 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0116 a0002c0002t0002g0117 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0002g0130 a0002c0002t0002g0131 a0002c0002t0002g0135 a0002c0002t0002g0138 a0002c0002t0002g0141 a0002c0002t0011g0094 a0003c0003t0002g0049 a0003c0003t0002g0137 a0006c0006t0003g0054 a0006c0006t0003g0055 a0009c0012t0002g0112	29	266	0.1090	12	c.131 others(31): Show c.1318+9773_1318+9784dupACACACACACAC	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	11/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15799135	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp1 HG00423.hp2 others(19): Show HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG01257.hp1 HG02109.hp2 HG02129.hp1 HG02615.hp2 HG02717.hp1 HG03017.hp1 HG03041.hp2 HG03669.hp2 HG04115.hp1 NA18940.hp1 NA18948.hp1 NA18966.hp1 NA18983.hp2 NA18994.hp2 NA19068.hp2 NA19090.hp1 NA20129.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0022	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0003c0014 a0006c0006 a0022c0022	a0001c0001t0001 a0002c0002t0002 a0002c0002t0011 others(7): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0011 a0002c0002t0022 a0003c0003t0001 a0003c0003t0006 a0003c0003t0007 a0003c0014t0004 a0006c0006t0003 a0022c0022t0002	a0001c0001t0001g0194 a0001c0001t0001g0195 a0002c0002t0002g0071 others(19): Show a0001c0001t0001g0194 a0001c0001t0001g0195 a0002c0002t0002g0071 a0002c0002t0002g0074 a0002c0002t0002g0080 a0002c0002t0002g0087 a0002c0002t0002g0088 a0002c0002t0002g0095 a0002c0002t0002g0096 a0002c0002t0002g0098 a0002c0002t0002g0099 a0002c0002t0002g0117 a0002c0002t0002g0128 a0002c0002t0011g0133 a0002c0002t0022g0083 a0003c0003t0001g0144 a0003c0003t0006g0253 a0003c0003t0006g0255 a0003c0003t0007g0263 a0003c0014t0004g0066 a0006c0006t0003g0035 a0022c0022t0002g0089	22	266	0.0827	12	c.326 others(33): Show c.3267+14461_3267+14472dupTATATATATATA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	21/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15799158	A A	ATATATAT others(5): Show ATATATATATATG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0011 a0011	a0011c0010 a0011c0010	a0011c0010t0027 a0011c0010t0027	a0011c0010t0027g0003 a0011c0010t0027g0003	1	266	0.0038	12	c.326 others(33): Show c.3267+14472_3267+14473insTATGTATATATA	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	21/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15860936	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02273.hp1 HG02602.hp2 HG02970.hp2 others(9): Show HG02273.hp1 HG02602.hp2 HG02970.hp2 HG03195.hp1 HG03239.hp2 HG03471.hp2 NA18964.hp2 NA18972.hp2 NA18983.hp1 NA19001.hp2 NA19002.hp1 NA19077.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0003c0003 a0004c0004 others(1): Show a0001c0001 a0003c0003 a0004c0004 a0005c0005	a0001c0001t0001 a0003c0003t0006 a0004c0004t0003 others(2): Show a0001c0001t0001 a0003c0003t0006 a0004c0004t0003 a0004c0004t0013 a0005c0005t0017	a0001c0001t0001g0019 a0001c0001t0001g0208 a0003c0003t0006g0256 others(9): Show a0001c0001t0001g0019 a0001c0001t0001g0208 a0003c0003t0006g0256 a0003c0003t0006g0266 a0004c0004t0003g0026 a0004c0004t0003g0039 a0004c0004t0003g0040 a0004c0004t0003g0043 a0004c0004t0003g0044 a0004c0004t0003g0047 a0004c0004t0013g0042 a0005c0005t0017g0001	12	266	0.0451	12	c.346 others(33): Show c.3468+12004_3468+12015dupTGTGTGTGTGTG	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	23/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC171_chr9_15548043_15979037	15944836	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01346.hp2 HG02074.hp2 others(4): Show HG01109.hp1 HG01346.hp2 HG02074.hp2 HG02129.hp2 HG02293.hp1 HG02630.hp2 HG03704.hp2	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0008	a0001c0001 a0003c0003 a0005c0005 others(1): Show a0001c0001 a0003c0003 a0005c0005 a0008c0008	a0001c0001t0004 a0003c0003t0004 a0003c0003t0008 others(3): Show a0001c0001t0004 a0003c0003t0004 a0003c0003t0008 a0005c0005t0005 a0005c0005t0009 a0008c0008t0008	a0001c0001t0004g0166 a0003c0003t0004g0081 a0003c0003t0008g0225 others(4): Show a0001c0001t0004g0166 a0003c0003t0004g0081 a0003c0003t0008g0225 a0005c0005t0005g0251 a0005c0005t0009g0240 a0005c0005t0009g0243 a0008c0008t0008g0238	7	266	0.0263	12	c.375 others(33): Show c.3753+24454_3753+24465dupCTTTCTTTCTTT	CCDC171	ENSG00000164989.17	transcript	ENST00000380701.8	protein_coding	25/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CCDC172_chr10_116319448_116385029	116356388	G G	GAGGAAGG others(5): Show GAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18946.hp1 NA18993.hp2 others(3): Show NA18941.hp1 NA18946.hp1 NA18993.hp2 NA19002.hp2 NA19004.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0127 a0001c0001t0002g0128 others(1): Show a0001c0001t0002g0012 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0182	6	338	0.0178	12	c.449 others(27): Show c.449-978_449-967dupGGAAGGAAGGAA	CCDC172	ENSG00000182645.6	transcript	ENST00000333254.4	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC174_chr3_14646762_14677655	14665263	A A	ATTGATTG others(5): Show ATTGATTGATTGG	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG03710.hp2 HG02602.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0144 a0001c0001t0001g0145	2	432	0.0046	12	c.581 others(27): Show c.581+140_581+141insTTGATTGATTGG	CCDC174	ENSG00000154781.17	transcript	ENST00000383794.7	protein_coding	6/10			chr3	TogoVar
CCDC175_chr14_59500067_59581812	59508399	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00642.hp1 HG01175.hp1 others(20): Show HG00408.hp2 HG00642.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01496.hp2 HG01516.hp2 HG02145.hp2 HG02559.hp1 HG02683.hp2 HG02896.hp1 HG03130.hp2 HG03490.hp2 NA18940.hp2 NA18955.hp1 NA18999.hp2 NA19011.hp2 NA19043.hp2 NA19060.hp2 NA19068.hp1 NA19084.hp2 NA20129.hp1 NA20752.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0011	a0001c0001 a0002c0002 a0002c0015 others(3): Show a0001c0001 a0002c0002 a0002c0015 a0003c0003 a0007c0021 a0011c0019	a0001c0001t0001 a0002c0002t0001 a0002c0015t0001 others(3): Show a0001c0001t0001 a0002c0002t0001 a0002c0015t0001 a0003c0003t0001 a0007c0021t0001 a0011c0019t0001	a0001c0001t0001g0007 a0001c0001t0001g0060 a0001c0001t0001g0064 others(18): Show a0001c0001t0001g0007 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0086 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0113 a0002c0002t0001g0139 a0002c0015t0001g0270 a0003c0003t0001g0005 a0003c0003t0001g0021 a0003c0003t0001g0024 a0003c0003t0001g0025 a0003c0003t0001g0027 a0003c0003t0001g0029 a0007c0021t0001g0136 a0011c0019t0001g0226	23	294	0.0782	12	c.230 others(31): Show c.2305+2235_2305+2246dupGTGTGTGTGTGT	CCDC175	ENSG00000151838.12	transcript	ENST00000537690.7	protein_coding	19/19			chr14	TogoVar

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