Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCN6_chr6_112049104_112074686	112065628	A A	ACACACAC others(5): Show ACACACACGCACG	intron_variant intron_variant	MODIFIER	HG02074.hp1 NA18960.hp2 NA18968.hp1 others(3): Show HG02074.hp1 NA18960.hp2 NA18968.hp1 NA18972.hp1 NA19002.hp1 NA19064.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0009 a0002c0002t0002g0009	6	430	0.0140	12	c.589 others(27): Show c.589+638_589+639insGCACGCACACAC	CCN6	ENSG00000112761.22	transcript	ENST00000368666.7	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr6	TogoVar
CCNB1IP1_chr14_20306370_20338279	20332026	A A	ATATATTT others(5): Show ATATATTTTTTTT	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0128 a0001c0002t0001g0128	1	418	0.0024	12	c.-43 others(31): Show c.-431+1227_-431+1228insAAAAAAAATATA	CCNB1IP1	ENSG00000100814.19	transcript	ENST00000358932.9	protein_coding	1/6			chr14	TogoVar
CCNB1_chr5_69162150_69183245	69164024	A A	AATATATA others(5): Show AATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0011 a0001c0001t0002g0011	1	420	0.0024	12	c.-32 others(23): Show c.-3239_-3238insATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3125		chr5	TogoVar
CCNB1_chr5_69162150_69183245	69164026	A A	AATATATA others(5): Show AATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	420	0.0024	12	c.-32 others(23): Show c.-3237_-3236insATATATATATAT	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding		3123		chr5	TogoVar
CCNB1_chr5_69162150_69183245	69175982	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00642.hp2 HG01928.hp2 others(14): Show HG00609.hp1 HG00642.hp2 HG01928.hp2 HG02040.hp2 HG02071.hp2 HG02630.hp1 HG02895.hp2 HG02897.hp2 HG02976.hp2 HG03209.hp2 NA18950.hp1 NA18986.hp1 NA18997.hp2 NA19056.hp1 NA19057.hp2 NA19087.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0010 a0001c0001t0002g0016 a0001c0001t0002g0040 others(2): Show a0001c0001t0002g0010 a0001c0001t0002g0016 a0001c0001t0002g0040 a0001c0001t0002g0054 a0001c0001t0002g0067	17	420	0.0405	12	c.108 others(29): Show c.1083+467_1083+478dupTATATATATATA	CCNB1	ENSG00000134057.15	transcript	ENST00000256442.10	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
CCNB2_chr15_59100146_59130045	59122241	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG02148.hp1 NA18956.hp1 HG01358.hp2 HG02148.hp1 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0120 a0001c0001t0001g0125 a0001c0001t0001g0075 a0001c0001t0001g0120 a0001c0001t0001g0125	3	388	0.0077	12	c.976 others(29): Show c.976-1262_976-1251dupTTTTTTTTTTTT	CCNB2	ENSG00000157456.8	transcript	ENST00000288207.7	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
CCNC_chr6_99537387_99573660	99569730	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02622.hp2 HG02630.hp1 HG01243.hp1 HG02622.hp2 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146	3	410	0.0073	12	c.-12 others(23): Show c.-1215_-1204dupAAAAAAAAAAAA	CCNC	ENSG00000112237.13	transcript	ENST00000520429.6	protein_coding		1071		chr6	TogoVar
CCND2_chr12_4268762_4310353	4291207	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00639.hp2 HG01928.hp1 others(49): Show HG00597.hp1 HG00639.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG02015.hp2 HG02040.hp1 HG02074.hp1 HG02630.hp2 HG02886.hp1 HG03041.hp2 HG03225.hp1 HG03704.hp2 NA18522.hp2 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18952.hp2 NA18955.hp2 NA18957.hp2 NA18969.hp1 NA18971.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18978.hp1 NA18982.hp1 NA18985.hp2 NA18990.hp2 NA18994.hp2 NA18997.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp2 NA19012.hp2 NA19055.hp2 NA19057.hp2 NA19059.hp1 NA19059.hp2 NA19063.hp1 NA19064.hp1 NA19066.hp2 NA19070.hp1 NA19079.hp1 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(14): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0019 a0001c0001t0022 a0001c0001t0048 a0001c0001t0073 a0001c0001t0081 a0001c0001t0091 a0001c0002t0003 a0001c0002t0004 a0001c0002t0007 a0001c0002t0022	a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0237 others(37): Show a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0237 a0001c0001t0001g0369 a0001c0001t0003g0006 a0001c0001t0003g0227 a0001c0001t0003g0230 a0001c0001t0003g0352 a0001c0001t0006g0052 a0001c0001t0006g0173 a0001c0001t0007g0003 a0001c0001t0007g0297 a0001c0001t0007g0320 a0001c0001t0013g0002 a0001c0001t0013g0357 a0001c0001t0014g0231 a0001c0001t0015g0225 a0001c0001t0015g0226 a0001c0001t0015g0229 a0001c0001t0015g0333 a0001c0001t0019g0271 a0001c0001t0019g0296 a0001c0001t0019g0317 a0001c0001t0022g0268 a0001c0001t0048g0347 a0001c0001t0073g0236 a0001c0001t0081g0006 a0001c0001t0091g0342 a0001c0002t0003g0006 a0001c0002t0004g0116 a0001c0002t0004g0120 a0001c0002t0004g0263 a0001c0002t0007g0003 a0001c0002t0007g0042 a0001c0002t0007g0043 a0001c0002t0007g0224 a0001c0002t0007g0259 a0001c0002t0007g0260 a0001c0002t0007g0358 a0001c0002t0022g0018	52	460	0.1130	12	c.720 others(29): Show c.720+2233_720+2244dupGTGTGTGTGTGT	CCND2	ENSG00000118971.9	transcript	ENST00000261254.8	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCNE1_chr19_29806991_29829312	29828416	C C	CGTTTTCT others(5): Show CGTTTTCTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03195.hp2 HG03225.hp1 HG03579.hp2 HG03195.hp2 HG03225.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0107 a0001c0001t0001g0035 a0001c0001t0001g0107	3	426	0.0070	12	c.46 others(23): Show c.4639_*4640insGTTTTCTTTTTT	CCNE1	ENSG00000105173.14	transcript	ENST00000262643.8	protein_coding		4105		chr19	TogoVar
CCNE1_chr19_29806991_29829312	29828417	A A	ATTTTCTT others(5): Show ATTTTCTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00621.hp1 HG01081.hp1 HG01891.hp1 others(26): Show HG00621.hp1 HG01081.hp1 HG01891.hp1 HG02055.hp2 HG02148.hp1 HG02257.hp2 HG02451.hp1 HG02523.hp1 HG02615.hp2 HG02717.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03209.hp2 HG03579.hp1 HG06807.hp2 NA18906.hp1 NA18949.hp1 NA18949.hp2 NA18952.hp2 NA18967.hp2 NA18977.hp1 NA18985.hp2 NA19012.hp2 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0002t0001 a0001c0005t0002	a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0019 others(21): Show a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0019 a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0092 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0154 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0002g0004 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0075 a0001c0001t0003g0051 a0001c0001t0003g0057 a0001c0001t0009g0172 a0001c0002t0001g0115 a0001c0005t0002g0008	29	426	0.0681	12	c.46 others(23): Show c.4640_*4641insTTTTCTTTTTTT	CCNE1	ENSG00000105173.14	transcript	ENST00000262643.8	protein_coding		4106		chr19	TogoVar
CCNF_chr16_2424447_2463854	2441937	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	276	0.0036	12	c.778 others(29): Show c.778-1678_778-1667dupATATATATATAT	CCNF	ENSG00000162063.13	transcript	ENST00000397066.9	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCNI_chr4_77042155_77080989	77064585	G G	GCGCACAC others(5): Show GCGCACACACACA	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0181 a0001c0002t0005g0181	1	388	0.0026	12	c.114 others(29): Show c.114+1663_114+1664insTGTGTGTGTGCG	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding	2/6			chr4	TogoVar
CCNI_chr4_77042155_77080989	77075642	G G	GGCGCGCG others(5): Show GGCGCGCGGGCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0352 a0001c0001t0030g0352	1	388	0.0026	12	c.-21 others(21): Show c.-215_-214insGCGCCCGCGCGC	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding	1/7	9281		chr4	TogoVar
CCNI_chr4_77042155_77080989	77075642	G G	GGGGCGCG others(5): Show GGGGCGCGGGCGC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00544.hp1 HG00558.hp2 HG02015.hp1 others(22): Show HG00544.hp1 HG00558.hp2 HG02015.hp1 HG02074.hp1 HG02165.hp2 NA18747.hp1 NA18747.hp2 NA18943.hp2 NA18944.hp1 NA18946.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp1 NA18964.hp2 NA18966.hp2 NA18978.hp1 NA18980.hp2 NA18981.hp2 NA18990.hp2 NA18994.hp1 NA18998.hp2 NA19004.hp1 NA19009.hp2 NA19010.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0003 a0001c0001t0009	a0001c0001t0003g0020 a0001c0001t0003g0329 a0001c0001t0003g0330 others(21): Show a0001c0001t0003g0020 a0001c0001t0003g0329 a0001c0001t0003g0330 a0001c0001t0003g0331 a0001c0001t0003g0332 a0001c0001t0003g0333 a0001c0001t0003g0334 a0001c0001t0003g0335 a0001c0001t0003g0336 a0001c0001t0003g0337 a0001c0001t0003g0338 a0001c0001t0003g0339 a0001c0001t0003g0340 a0001c0001t0003g0341 a0001c0001t0003g0342 a0001c0001t0003g0343 a0001c0001t0003g0344 a0001c0001t0003g0350 a0001c0001t0003g0351 a0001c0001t0009g0345 a0001c0001t0009g0346 a0001c0001t0009g0347 a0001c0001t0009g0348 a0001c0001t0009g0349	25	388	0.0644	12	c.-22 others(21): Show c.-226_-215dupGCGCCCGCGCCC	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding	1/7	9281		chr4	TogoVar
CCNI_chr4_77042155_77080989	77078250	C C	CACATATT others(5): Show CACATATTATATG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	388	0.0026	12	c.-28 others(23): Show c.-2823_-2822insCATATAATATGT	CCNI	ENSG00000118816.11	transcript	ENST00000237654.9	protein_coding		2262		chr4	TogoVar
CCNJL_chr5_160244083_160317564	160282966	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01243.hp2 HG01255.hp1 others(6): Show HG00642.hp1 HG01243.hp2 HG01255.hp1 HG01981.hp1 HG02293.hp1 HG02738.hp2 HG03927.hp1 HG04199.hp1 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006	a0001c0001t0001g0056 a0001c0001t0001g0065 a0001c0001t0001g0117 others(6): Show a0001c0001t0001g0056 a0001c0001t0001g0065 a0001c0001t0001g0117 a0001c0001t0001g0198 a0001c0001t0002g0282 a0001c0001t0002g0297 a0001c0001t0005g0058 a0001c0001t0005g0135 a0001c0001t0006g0315	9	338	0.0266	12	c.67- others(27): Show c.67-2240_67-2229dupATATATATATAT	CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5			chr5	TogoVar
CCNJL_chr5_160244083_160317564	160282972	T T	TATATATA others(5): Show TATATATATATAC	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	338	0.0030	12	c.67- others(27): Show c.67-2235_67-2234insGTATATATATAT	CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5			chr5	TogoVar
CCNJL_chr5_160244083_160317564	160283000	T T	TATATATA others(5): Show TATATATATATAC	intron_variant intron_variant	MODIFIER	HG02056.hp2 NA18987.hp2 HG02056.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0142 a0001c0001t0001g0102 a0001c0001t0001g0142	2	338	0.0059	12	c.67- others(27): Show c.67-2263_67-2262insGTATATATATAT	CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5			chr5	TogoVar
CCNJ_chr10_96038583_96065870	96040787	C C	CATATATA others(5): Show CATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp2 HG01346.hp2 HG01361.hp2 others(20): Show HG01192.hp2 HG01346.hp2 HG01361.hp2 HG01934.hp2 HG02273.hp2 HG02293.hp1 HG02523.hp2 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02818.hp2 HG03130.hp2 HG03225.hp1 HG03516.hp1 NA18946.hp2 NA18955.hp2 NA18957.hp2 NA18969.hp2 NA19002.hp2 NA19010.hp1 NA19065.hp1 NA19084.hp1 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0020 a0001c0001t0023 a0001c0001t0032	a0001c0001t0001g0009 a0001c0001t0001g0027 a0001c0001t0001g0041 others(8): Show a0001c0001t0001g0009 a0001c0001t0001g0027 a0001c0001t0001g0041 a0001c0001t0005g0038 a0001c0001t0006g0004 a0001c0001t0007g0001 a0001c0001t0007g0037 a0001c0001t0010g0001 a0001c0001t0020g0001 a0001c0001t0023g0086 a0001c0001t0032g0096	23	418	0.0550	12	c.-29 others(23): Show c.-2974_-2973insATATATATATAT	CCNJ	ENSG00000107443.16	transcript	ENST00000465148.3	protein_coding		2795		chr10	TogoVar
CCNJ_chr10_96038583_96065870	96040787	C C	CATTCATA others(5): Show CATTCATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0008 a0001c0001t0013g0008	1	418	0.0024	12	c.-29 others(23): Show c.-2974_-2973insATTCATATATAT	CCNJ	ENSG00000107443.16	transcript	ENST00000465148.3	protein_coding		2795		chr10	TogoVar
CCNJ_chr10_96038583_96065870	96063560	A A	ACGGAGGA others(5): Show ACGGAGGAGGAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0017 a0001c0001t0002g0017	1	418	0.0024	12	c.53 others(23): Show c.5319_*5320insCGGAGGAGGAGG	CCNJ	ENSG00000107443.16	transcript	ENST00000465148.3	protein_coding		2691		chr10	TogoVar
CCNL1_chr3_157142553_157165147	157145437	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG02622.hp2 HG03486.hp1 others(2): Show HG01175.hp2 HG02622.hp2 HG03486.hp1 NA19030.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	5	426	0.0117	12	c.28 others(23): Show c.2803_*2804insTTTTTTTTTTTT	CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding		2115		chr3	TogoVar
CCNL1_chr3_157142553_157165147	157154929	T T	TATACATA others(5): Show TATACATACATAC	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	426	0.0024	12	c.489 others(29): Show c.489-1774_489-1773insGTATGTATGTAT	CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding	3/10			chr3	TogoVar
CCNL1_chr3_157142553_157165147	157154933	T T	TATACATA others(5): Show TATACATACATAC	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01192.hp1 HG01261.hp2 others(28): Show HG00408.hp1 HG01192.hp1 HG01261.hp2 HG01433.hp1 HG01891.hp1 HG01978.hp2 HG02055.hp1 HG02055.hp2 HG02258.hp1 HG02280.hp1 HG02300.hp2 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02723.hp2 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp2 HG03579.hp2 HG04204.hp2 NA18522.hp2 NA19002.hp1 NA19043.hp1 NA19062.hp2 NA19063.hp2 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 others(2): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 a0001c0002t0009 a0003c0004t0001	a0001c0001t0001g0007 a0001c0001t0001g0034 a0001c0001t0001g0063 others(13): Show a0001c0001t0001g0007 a0001c0001t0001g0034 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0097 a0001c0002t0001g0013 a0001c0002t0001g0047 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0006g0048 a0001c0002t0009g0049 a0003c0004t0001g0053	31	426	0.0728	12	c.489 others(29): Show c.489-1789_489-1778dupGTATGTATGTAT	CCNL1	ENSG00000163660.12	transcript	ENST00000295926.8	protein_coding	3/10			chr3	TogoVar
CCNQ_chrX_153582925_153604139	153590231	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02523.hp2 NA20129.hp2 HG02523.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0041 a0001c0001t0001g0042	2	302	0.0066	12	c.658 others(29): Show c.658-1789_658-1778dupTTTTTTTTTTTT	CCNQ	ENSG00000262919.8	transcript	ENST00000576892.8	protein_coding	4/4			chrX	TogoVar
CCNQ_chrX_153582925_153604139	153602318	A A	ATTATTTA others(5): Show ATTATTTATTTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03453.hp1 HG03688.hp1 HG03453.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0037 a0001c0001t0001g0002 a0001c0001t0001g0037	2	302	0.0066	12	c.-32 others(23): Show c.-3246_-3245insATAAATAAATAA	CCNQ	ENSG00000262919.8	transcript	ENST00000576892.8	protein_coding		3180		chrX	TogoVar
CCNT1_chr12_48683458_48721707	48683711	C C	CAAATAAA others(5): Show CAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG00639.hp1 HG00673.hp2 others(32): Show HG00558.hp1 HG00639.hp1 HG00673.hp2 HG00733.hp1 HG01123.hp2 HG01175.hp2 HG01261.hp1 HG01261.hp2 HG01952.hp1 HG01993.hp1 HG02083.hp1 HG02083.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02451.hp2 HG02523.hp1 HG02683.hp2 HG03195.hp1 HG03669.hp2 NA18947.hp1 NA18954.hp1 NA18954.hp2 NA18964.hp1 NA18970.hp2 NA18974.hp1 NA18989.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19007.hp1 NA19060.hp2 NA19064.hp2 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 a0001c0001t0019 a0001c0001t0031	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(25): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0038 a0001c0001t0001g0157 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0224 a0001c0001t0001g0230 a0001c0001t0001g0246 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0262 a0001c0001t0004g0006 a0001c0001t0004g0205 a0001c0001t0004g0261 a0001c0001t0005g0005 a0001c0001t0005g0034 a0001c0001t0005g0216 a0001c0001t0005g0235 a0001c0001t0005g0236 a0001c0001t0006g0007 a0001c0001t0006g0193 a0001c0001t0015g0248 a0001c0001t0019g0219 a0001c0001t0031g0194	35	386	0.0907	12	c.93 others(23): Show c.9321_*9322insATTTATTTATTT	CCNT1	ENSG00000129315.12	transcript	ENST00000261900.8	protein_coding		4746		chr12	TogoVar
CCNT2_chr2_134913822_134964342	134928274	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0295 a0001c0001t0005g0295	1	404	0.0025	12	c.240 others(29): Show c.240+8391_240+8402dupTTTTTTTTTTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNT2_chr2_134913822_134964342	134929613	C C	CAGAGAGA others(5): Show CAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp2 HG01099.hp2 others(27): Show HG00639.hp1 HG00735.hp2 HG01099.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01978.hp2 HG02145.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG03130.hp2 HG03486.hp1 HG03710.hp2 HG03834.hp1 HG04184.hp2 HG06807.hp1 NA18522.hp2 NA18940.hp1 NA18960.hp2 NA18961.hp2 NA18974.hp1 NA18986.hp2 NA19003.hp1 NA19011.hp2 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0021 a0001c0002t0002 a0001c0003t0002 a0001c0003t0026	a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0015 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0149 a0001c0001t0001g0332 a0001c0001t0001g0336 a0001c0001t0004g0226 a0001c0001t0008g0077 a0001c0001t0008g0078 a0001c0001t0008g0079 a0001c0001t0021g0033 a0001c0002t0002g0337 a0001c0003t0002g0039 a0001c0003t0002g0069 a0001c0003t0026g0116	30	404	0.0743	12	c.241 others(29): Show c.241-7216_241-7205dupGAGAGAGAGAGA	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNT2_chr2_134913822_134964342	134931260	A A	ATTTTTTT others(5): Show ATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0214 a0001c0001t0003g0214	1	404	0.0025	12	c.241 others(29): Show c.241-5580_241-5579insTTTTTTTTTTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNT2_chr2_134913822_134964342	134931262	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0181 a0001c0001t0005g0181	1	404	0.0025	12	c.241 others(29): Show c.241-5565_241-5554dupTTTTTTTTTTTT	CCNT2	ENSG00000082258.13	transcript	ENST00000264157.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207708084	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01069.hp1 HG01256.hp2 HG01496.hp2 others(13): Show HG01069.hp1 HG01256.hp2 HG01496.hp2 HG02280.hp2 HG02647.hp1 HG02723.hp1 HG02735.hp1 HG02976.hp1 HG03017.hp2 HG03041.hp2 HG03540.hp1 NA18964.hp2 NA18966.hp2 NA18984.hp1 NA19010.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0002t0001 a0002c0003t0001	a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0054 others(13): Show a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0054 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0077 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0006g0068 a0001c0001t0006g0083 a0001c0002t0001g0320 a0001c0002t0001g0322 a0002c0003t0001g0113	16	354	0.0452	12	c.-38 others(23): Show c.-3813_-3812insTTTTTTTTTTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding		3555		chr2	TogoVar
CCNYL1_chr2_207706640_207761174	207743806	T T	TTTTTTGT others(5): Show TTTTTTGTTTTTG	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02040.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	354	0.0028	12	c.639 others(29): Show c.639+1481_639+1492dupTGTTTTTGTTTT	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCNY_chr10_35331509_35577667	35406233	A A	ATTTATTT others(5): Show ATTTATTTATTTT	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0245 a0001c0002t0001g0245	1	296	0.0034	12	c.154 others(31): Show c.154+69033_154+69044dupTATTTTTTTATT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35416160	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02055.hp1 HG02572.hp1 others(5): Show HG01167.hp1 HG02055.hp1 HG02572.hp1 HG02647.hp2 HG02970.hp2 HG03453.hp1 NA18984.hp1 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0010 others(5): Show a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0010 a0001c0001t0002g0028 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0145 a0001c0001t0010g0007	8	296	0.0270	12	c.155 others(31): Show c.155-67221_155-67210dupGTGTGTGTGTGT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35431355	C C	CCCCCCTC others(5): Show CCCCCCTCCACCT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0224 a0001c0002t0001g0224	1	296	0.0034	12	c.155 others(31): Show c.155-52041_155-52040insACCTCCCCCTCC	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35431355	C C	CCCCCCTC others(5): Show CCCCCCTCCCCCT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00423.hp1 others(74): Show HG00140.hp2 HG00323.hp2 HG00423.hp1 HG00733.hp1 HG00735.hp2 HG01069.hp1 HG01071.hp2 HG01123.hp1 HG01169.hp2 HG01257.hp2 HG01358.hp1 HG01516.hp2 HG01891.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp2 HG02015.hp1 HG02027.hp1 HG02080.hp1 HG02083.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02258.hp1 HG02293.hp2 HG02451.hp2 HG02735.hp2 HG02809.hp2 HG03017.hp1 HG03041.hp1 HG03654.hp1 HG03688.hp2 HG03710.hp2 HG03831.hp2 HG03834.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp1 NA18939.hp2 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18950.hp2 NA18953.hp2 NA18954.hp1 NA18957.hp1 NA18959.hp2 NA18966.hp2 NA18967.hp2 NA18968.hp2 NA18977.hp1 NA18979.hp2 NA18983.hp1 NA18986.hp1 NA18991.hp2 NA18993.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19043.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20905.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 others(4): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0014 a0001c0001t0021 a0002c0003t0002 a0002c0003t0020	a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0030 others(74): Show a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0050 a0001c0001t0002g0053 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0002g0083 a0001c0001t0002g0084 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0123 a0001c0001t0002g0129 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0005g0045 a0001c0001t0005g0063 a0001c0001t0005g0078 a0001c0001t0005g0082 a0001c0001t0005g0102 a0001c0001t0005g0121 a0001c0001t0011g0122 a0001c0001t0014g0127 a0001c0001t0021g0114 a0002c0003t0002g0054 a0002c0003t0002g0071 a0002c0003t0002g0072 a0002c0003t0002g0095 a0002c0003t0002g0096 a0002c0003t0002g0097 a0002c0003t0002g0120 a0002c0003t0002g0124 a0002c0003t0002g0125 a0002c0003t0002g0271 a0002c0003t0020g0094	77	296	0.2601	12	c.155 others(31): Show c.155-52036_155-52025dupCCCCCTCCCCCT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35431401	C C	CCTCCCTC others(5): Show CCTCCCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0282 a0001c0001t0017g0282	1	296	0.0034	12	c.155 others(31): Show c.155-52000_155-51999insCCTCTCTCTCTC	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35444249	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0024 a0001c0001t0015g0024	1	296	0.0034	12	c.155 others(31): Show c.155-39150_155-39139dupTTTTTTTTTTTT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35465938	A A	AGAGAGAG others(5): Show AGAGAGAGAGAGT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0064 a0001c0001t0002g0064	1	296	0.0034	12	c.155 others(31): Show c.155-17465_155-17464insAGAGAGAGAGTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35465938	A A	AGAGAGAG others(5): Show AGAGAGAGAGTGT	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA19083.hp1 NA18967.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0065 a0001c0001t0002g0083 a0001c0001t0002g0065 a0001c0001t0002g0083	2	296	0.0068	12	c.155 others(31): Show c.155-17465_155-17464insAGAGAGAGTGTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35465938	A A	AGAGAGAG others(5): Show AGAGAGAGTGTGT	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0081 a0001c0001t0005g0081	1	296	0.0034	12	c.155 others(31): Show c.155-17465_155-17464insAGAGAGTGTGTG	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCNY_chr10_35331509_35577667	35482749	G G	GGTGTGTG others(5): Show GGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02135.hp1 HG04199.hp2 others(2): Show HG02074.hp1 HG02135.hp1 HG04199.hp2 NA18954.hp2 NA19082.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0175 a0001c0002t0001g0200 a0001c0002t0001g0214 others(2): Show a0001c0002t0001g0175 a0001c0002t0001g0200 a0001c0002t0001g0214 a0001c0002t0001g0246 a0001c0002t0001g0262	5	296	0.0169	12	c.155 others(27): Show c.155-614_155-603dupGTGTGTGTGTGT	CCNY	ENSG00000108100.18	transcript	ENST00000374704.8	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCP110_chr16_19518942_19558408	19538302	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02109.hp1 HG02258.hp2 others(6): Show HG00621.hp1 HG02109.hp1 HG02258.hp2 HG02647.hp1 HG02886.hp1 HG03041.hp2 NA18991.hp2 NA19079.hp2 NA19080.hp2	a0001 a0002 a0001 a0002	a0001c0010 a0002c0001 a0002c0009 a0001c0010 a0002c0001 a0002c0009	a0001c0010t0007 a0002c0001t0002 a0002c0001t0022 others(2): Show a0001c0010t0007 a0002c0001t0002 a0002c0001t0022 a0002c0009t0005 a0002c0009t0023	a0001c0010t0007g0095 a0002c0001t0002g0052 a0002c0001t0002g0056 others(5): Show a0001c0010t0007g0095 a0002c0001t0002g0052 a0002c0001t0002g0056 a0002c0001t0002g0197 a0002c0001t0022g0052 a0002c0009t0005g0034 a0002c0009t0005g0100 a0002c0009t0023g0034	9	386	0.0233	12	c.191 others(29): Show c.1918+732_1918+743dupTTTTTTTTTTTT	CCP110	ENSG00000103540.17	transcript	ENST00000694978.1	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
CCPG1_chr15_55350239_55413359	55363799	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0065 a0001c0002t0006g0065	1	354	0.0028	12	c.828 others(29): Show c.828+1377_828+1388dupAAAAAAAAAAAA	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	7/8			chr15	TogoVar
CCPG1_chr15_55350239_55413359	55379161	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp2 HG01167.hp2 others(31): Show HG00639.hp1 HG01109.hp2 HG01167.hp2 HG01169.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp1 HG02055.hp2 HG02109.hp1 HG02135.hp2 HG02145.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp2 HG02683.hp1 HG02809.hp1 HG02976.hp2 HG03098.hp2 HG03209.hp2 HG03453.hp1 HG03471.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp2 NA18522.hp1 NA18971.hp2 NA18981.hp2 NA19081.hp2 NA20805.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0005 a0001c0002 a0001c0003 a0003c0005	a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 others(1): Show a0001c0002t0001 a0001c0003t0002 a0001c0003t0003 a0003c0005t0003	a0001c0002t0001g0009 a0001c0002t0001g0055 a0001c0002t0001g0057 others(28): Show a0001c0002t0001g0009 a0001c0002t0001g0055 a0001c0002t0001g0057 a0001c0002t0001g0059 a0001c0002t0001g0071 a0001c0002t0001g0080 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0151 a0001c0002t0001g0152 a0001c0002t0001g0153 a0001c0002t0001g0280 a0001c0003t0002g0003 a0001c0003t0002g0295 a0001c0003t0002g0296 a0001c0003t0002g0298 a0001c0003t0002g0300 a0001c0003t0002g0301 a0001c0003t0002g0304 a0001c0003t0002g0305 a0001c0003t0002g0306 a0001c0003t0002g0308 a0001c0003t0002g0313 a0001c0003t0002g0314 a0001c0003t0002g0315 a0001c0003t0002g0319 a0001c0003t0003g0332 a0001c0003t0003g0333 a0003c0005t0003g0289 a0003c0005t0003g0292	34	354	0.0961	12	c.176 others(27): Show c.176-797_176-786dupACACACACACAC	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	3/8			chr15	TogoVar
CCPG1_chr15_55350239_55413359	55380850	T T	TAAAAATA others(5): Show TAAAAATACAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00738.hp2 HG01069.hp2 others(50): Show HG00642.hp2 HG00738.hp2 HG01069.hp2 HG01071.hp2 HG01167.hp2 HG01169.hp1 HG01891.hp1 HG01891.hp2 HG02055.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02809.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18989.hp2 NA19030.hp1 NA19240.hp1 NA20805.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0003 a0001c0008 a0003c0005 others(1): Show a0001c0003 a0001c0008 a0003c0005 a0007c0012	a0001c0003t0002 a0001c0003t0003 a0001c0003t0008 others(4): Show a0001c0003t0002 a0001c0003t0003 a0001c0003t0008 a0001c0008t0002 a0003c0005t0003 a0003c0005t0010 a0007c0012t0003	a0001c0003t0002g0003 a0001c0003t0002g0295 a0001c0003t0002g0296 others(48): Show a0001c0003t0002g0003 a0001c0003t0002g0295 a0001c0003t0002g0296 a0001c0003t0002g0297 a0001c0003t0002g0298 a0001c0003t0002g0299 a0001c0003t0002g0300 a0001c0003t0002g0301 a0001c0003t0002g0302 a0001c0003t0002g0303 a0001c0003t0002g0304 a0001c0003t0002g0305 a0001c0003t0002g0306 a0001c0003t0002g0307 a0001c0003t0002g0308 a0001c0003t0002g0312 a0001c0003t0002g0313 a0001c0003t0002g0314 a0001c0003t0002g0315 a0001c0003t0002g0316 a0001c0003t0002g0317 a0001c0003t0002g0318 a0001c0003t0002g0319 a0001c0003t0003g0286 a0001c0003t0003g0311 a0001c0003t0003g0320 a0001c0003t0003g0321 a0001c0003t0003g0322 a0001c0003t0003g0323 a0001c0003t0003g0324 a0001c0003t0003g0325 a0001c0003t0003g0326 a0001c0003t0003g0327 a0001c0003t0003g0331 a0001c0003t0003g0332 a0001c0003t0003g0333 a0001c0003t0008g0309 a0001c0003t0008g0310 a0001c0008t0002g0328 a0001c0008t0002g0329 a0001c0008t0002g0330 a0003c0005t0003g0284 a0003c0005t0003g0285 a0003c0005t0003g0287 a0003c0005t0003g0288 a0003c0005t0003g0289 a0003c0005t0003g0291 a0003c0005t0003g0292 a0003c0005t0003g0293 a0003c0005t0010g0290 a0007c0012t0003g0294	53	354	0.1497	12	c.176 others(29): Show c.176-2475_176-2474insTTTTGTATTTTT	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	3/8			chr15	TogoVar
CCPG1_chr15_55350239_55413359	55389068	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01243.hp2 HG02027.hp2 others(3): Show HG00741.hp2 HG01243.hp2 HG02027.hp2 NA18965.hp1 NA18973.hp1 NA19064.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0096 a0002c0004t0001g0097 a0002c0004t0001g0099 others(3): Show a0002c0004t0001g0096 a0002c0004t0001g0097 a0002c0004t0001g0099 a0002c0004t0001g0100 a0002c0004t0001g0277 a0002c0004t0001g0278	6	354	0.0170	12	c.60+ others(25): Show c.60+285_60+296dupTTTTTTTTTTTT	CCPG1	ENSG00000260916.8	transcript	ENST00000442196.8	protein_coding	2/8			chr15	TogoVar
CCR10_chr17_42673889_42686843	42686469	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp2 HG02723.hp1 HG01981.hp2 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0001 a0001c0001t0001g0007	2	366	0.0055	12	c.-46 others(23): Show c.-4658_-4647dupAAAAAAAAAAAA	CCR10	ENSG00000184451.5	transcript	ENST00000332438.4	protein_coding		4627		chr17	TogoVar
CCR2_chr3_46349111_46365940	46362340	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG01070.hp1 HG01071.hp1 others(3): Show HG00423.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01099.hp1 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0002t0003g0003 a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0002t0003g0003	6	438	0.0137	12	c.37 others(23): Show c.3730_*3731insTGTGTGTGTGTG	CCR2	ENSG00000121807.7	transcript	ENST00000445132.3	protein_coding		1401		chr3	TogoVar

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