Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CD2AP_chr6_47472789_47632263	47497347	C C	CTCCCCTT others(5): Show CTCCCCTTCCCCT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG03098.hp2 HG01255.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0055 a0001c0001t0053 a0001c0001t0055	a0001c0001t0053g0097 a0001c0001t0055g0098 a0001c0001t0053g0097 a0001c0001t0055g0098	2	322	0.0062	12	c.5-5 others(25): Show c.5-5918_5-5907dupCCCTTCCCCTTC	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47566323	T T	TATACACA others(5): Show TATACACACACAC	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0064 a0001c0001t0064	a0001c0001t0064g0284 a0001c0001t0064g0284	1	322	0.0031	12	c.542 others(29): Show c.542-7740_542-7739insTACACACACACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47566323	T T	TATATACA others(5): Show TATATACACACAC	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0245	1	322	0.0031	12	c.542 others(29): Show c.542-7740_542-7739insTATACACACACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47589379	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp1 HG01069.hp1 others(35): Show HG00099.hp1 HG00735.hp1 HG01069.hp1 HG01071.hp2 HG01106.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01358.hp2 HG01891.hp2 HG01943.hp2 HG02056.hp1 HG02148.hp2 HG02165.hp1 HG02523.hp2 HG02602.hp1 HG02922.hp1 HG03579.hp1 HG03669.hp2 HG03710.hp1 HG03710.hp2 HG03942.hp2 HG04184.hp1 NA18939.hp2 NA18940.hp1 NA18943.hp2 NA18946.hp2 NA18954.hp1 NA18966.hp2 NA18972.hp1 NA18977.hp1 NA18993.hp2 NA19000.hp1 NA19011.hp1 NA19091.hp1	a0001 a0004 a0007 a0001 a0004 a0007	a0001c0001 a0004c0006 a0007c0009 a0001c0001 a0004c0006 a0007c0009	a0001c0001t0006 a0001c0001t0008 a0001c0001t0020 others(13): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0020 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0062 a0001c0001t0063 a0001c0001t0095 a0001c0001t0097 a0001c0001t0098 a0001c0001t0100 a0001c0001t0101 a0004c0006t0040 a0007c0009t0099	a0001c0001t0006g0167 a0001c0001t0006g0179 a0001c0001t0006g0180 others(35): Show a0001c0001t0006g0167 a0001c0001t0006g0179 a0001c0001t0006g0180 a0001c0001t0006g0183 a0001c0001t0006g0186 a0001c0001t0006g0314 a0001c0001t0006g0315 a0001c0001t0006g0316 a0001c0001t0006g0317 a0001c0001t0006g0318 a0001c0001t0008g0166 a0001c0001t0008g0169 a0001c0001t0008g0170 a0001c0001t0008g0172 a0001c0001t0008g0174 a0001c0001t0008g0178 a0001c0001t0008g0182 a0001c0001t0008g0310 a0001c0001t0020g0175 a0001c0001t0020g0176 a0001c0001t0020g0177 a0001c0001t0020g0194 a0001c0001t0040g0161 a0001c0001t0041g0171 a0001c0001t0041g0189 a0001c0001t0042g0168 a0001c0001t0042g0192 a0001c0001t0043g0184 a0001c0001t0043g0185 a0001c0001t0062g0163 a0001c0001t0063g0164 a0001c0001t0095g0188 a0001c0001t0097g0181 a0001c0001t0098g0191 a0001c0001t0100g0187 a0001c0001t0101g0173 a0004c0006t0040g0193 a0007c0009t0099g0190	38	322	0.1180	12	c.110 others(31): Show c.1109-6478_1109-6467dupCACACACACACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47589379	T T	TATACACA others(5): Show TATACACACACAC	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0064 a0001c0001t0064	a0001c0001t0064g0284 a0001c0001t0064g0284	1	322	0.0031	12	c.110 others(31): Show c.1109-6481_1109-6480insTACACACACACA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47589565	C C	CACACACA others(5): Show CACACACATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0080 a0001c0001t0080	a0001c0001t0080g0207 a0001c0001t0080g0207	1	322	0.0031	12	c.110 others(31): Show c.1109-6295_1109-6294insCACACATATATA	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	11/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47610949	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0101 a0001c0001t0007g0101	1	322	0.0031	12	c.181 others(31): Show c.1815-1516_1815-1505dupATATATATATAT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47615789	T T	TTTAATTA others(5): Show TTTAATTAATTAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0075 a0001c0001t0075	a0001c0001t0075g0010 a0001c0001t0075g0010	1	322	0.0031	12	c.187 others(31): Show c.1878+3259_1878+3260insAATTAATTAATT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47615792	A A	AATTTATT others(5): Show AATTTATTTATTT	intron_variant intron_variant	MODIFIER	HG01168.hp2 NA19059.hp2 HG01168.hp2 NA19059.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0026 a0001c0001t0002 a0001c0001t0026	a0001c0001t0002g0096 a0001c0001t0026g0016 a0001c0001t0002g0096 a0001c0001t0026g0016	2	322	0.0062	12	c.187 others(31): Show c.1878+3284_1878+3295dupTATTTATTTATT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47616082	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02559.hp1 HG02895.hp1 HG02148.hp1 HG02559.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0048 a0001c0001t0065 a0001c0001t0046 a0001c0001t0048 a0001c0001t0065	a0001c0001t0046g0118 a0001c0001t0048g0321 a0001c0001t0065g0197 a0001c0001t0046g0118 a0001c0001t0048g0321 a0001c0001t0065g0197	3	322	0.0093	12	c.187 others(31): Show c.1878+3562_1878+3573dupTTTTTTTTTTTT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	17/17		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2AP_chr6_47472789_47632263	47624679	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01069.hp2 HG01168.hp2 HG02280.hp1 others(7): Show HG01069.hp2 HG01168.hp2 HG02280.hp1 HG02965.hp1 HG02970.hp1 HG03209.hp2 NA18906.hp2 NA19011.hp1 NA20752.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0026 a0001c0001t0031 others(1): Show a0001c0001t0016 a0001c0001t0026 a0001c0001t0031 a0001c0001t0063	a0001c0001t0016g0291 a0001c0001t0016g0292 a0001c0001t0016g0295 others(7): Show a0001c0001t0016g0291 a0001c0001t0016g0292 a0001c0001t0016g0295 a0001c0001t0016g0296 a0001c0001t0026g0016 a0001c0001t0026g0049 a0001c0001t0026g0052 a0001c0001t0031g0297 a0001c0001t0031g0303 a0001c0001t0063g0164	10	322	0.0311	12	c.48 others(21): Show c.484_*495dupGTGTGTGTGTGT	CD2AP	ENSG00000198087.7	transcript	ENST00000359314.5	protein_coding	18/18	496	INFO_REALIGN_3_PRIME	chr6	TogoVar
CD2BP2_chr16_30345773_30360308	30347211	C C	CAATAAAT others(5): Show CAATAAATAAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	352	0.0028	12	c.57 others(23): Show c.5773_*5774insTATTTATTTATT	CD2BP2	ENSG00000169217.9	transcript	ENST00000305596.8	protein_coding		3561		chr16	TogoVar
CD2_chr1_116749430_116774229	116762311	A A	ATTTTTCA others(5): Show ATTTTTCATGTTT	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0220 a0002c0002t0001g0220	1	456	0.0022	12	c.613 others(29): Show c.613+1679_613+1680insTTTTTCATGTTT	CD2	ENSG00000116824.5	transcript	ENST00000369478.4	protein_coding	3/4			chr1	TogoVar
CD300A_chr17_74461634_74489794	74468009	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01257.hp2 HG01346.hp1 others(31): Show HG00673.hp2 HG01257.hp2 HG01346.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG02056.hp2 HG02080.hp1 HG02257.hp1 HG02622.hp1 HG02630.hp1 HG02886.hp1 HG02897.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03490.hp2 NA18747.hp2 NA18950.hp1 NA18950.hp2 NA18953.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp2 NA19002.hp2 NA19009.hp2 NA19043.hp1 NA19043.hp2 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0008t0003	a0001c0001t0001g0012 a0001c0001t0001g0059 a0001c0001t0001g0060 others(26): Show a0001c0001t0001g0012 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0132 a0001c0001t0001g0143 a0001c0001t0002g0022 a0001c0001t0002g0026 a0001c0001t0002g0056 a0001c0001t0002g0130 a0001c0001t0002g0133 a0001c0001t0002g0140 a0001c0001t0002g0145 a0001c0001t0003g0051 a0001c0001t0003g0058 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0129 a0001c0001t0003g0131 a0001c0001t0003g0136 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0144 a0001c0001t0004g0052 a0001c0001t0005g0022 a0001c0001t0005g0134 a0001c0001t0005g0139 a0001c0008t0003g0135	34	424	0.0802	12	c.40+ others(27): Show c.40+1294_40+1305dupATTTATTTATTT	CD300A	ENSG00000167851.15	transcript	ENST00000360141.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
CD300E_chr17_74604885_74628738	74608259	G G	GTAGATAG others(5): Show GTAGATAGATAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0005 a0002c0004t0005	a0002c0004t0005g0008 a0002c0004t0005g0008	1	450	0.0022	12	c.43 others(23): Show c.4393_*4394insTCTATCTATCTA	CD300E	ENSG00000186407.7	transcript	ENST00000392619.2	protein_coding		1625		chr17	TogoVar
CD300LB_chr17_74516174_74536475	74530591	A A	ACACACAC others(5): Show ACACACACACACC	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18522.hp2 HG03139.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0050 a0001c0001t0004g0065 a0001c0001t0004g0050 a0001c0001t0004g0065	2	406	0.0049	12	c.40+ others(25): Show c.40+719_40+720insGGTGTGTGTGTG	CD300LB	ENSG00000178789.9	transcript	ENST00000392621.6	protein_coding	1/3			chr17	TogoVar
CD300LD_chr17_74574365_74597283	74591268	A A	AAATAATA others(5): Show AAATAATAATAAT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01074.hp2 HG01106.hp1 others(45): Show HG01070.hp1 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG02145.hp2 HG02451.hp1 HG02559.hp1 HG02572.hp2 HG02647.hp2 HG02698.hp2 HG02735.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03239.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03654.hp2 HG03688.hp2 HG03831.hp1 HG06807.hp1 NA18945.hp2 NA18947.hp1 NA18948.hp2 NA18956.hp1 NA18959.hp2 NA18960.hp2 NA18967.hp1 NA18974.hp1 NA19006.hp1 NA19009.hp1 NA19030.hp2 NA19056.hp1 NA19063.hp2 NA19064.hp1 NA19079.hp1 NA19080.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA20752.hp2 NA20905.hp2 NA21309.hp1	a0003 a0003	a0003c0003 a0003c0004 a0003c0006 others(1): Show a0003c0003 a0003c0004 a0003c0006 a0003c0008	a0003c0003t0001 a0003c0003t0002 a0003c0004t0004 others(2): Show a0003c0003t0001 a0003c0003t0002 a0003c0004t0004 a0003c0006t0002 a0003c0008t0002	a0003c0003t0001g0073 a0003c0003t0002g0006 a0003c0003t0002g0011 others(18): Show a0003c0003t0001g0073 a0003c0003t0002g0006 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0002g0019 a0003c0003t0002g0020 a0003c0003t0002g0021 a0003c0003t0002g0031 a0003c0003t0002g0069 a0003c0003t0002g0070 a0003c0003t0002g0071 a0003c0003t0002g0072 a0003c0003t0002g0074 a0003c0003t0002g0076 a0003c0003t0002g0077 a0003c0003t0002g0117 a0003c0003t0002g0118 a0003c0003t0002g0120 a0003c0004t0004g0075 a0003c0006t0002g0040 a0003c0008t0002g0121	48	440	0.1091	12	c.40+ others(25): Show c.40+883_40+894dupATTATTATTATT	CD300LD	ENSG00000204345.1	transcript	ENST00000375352.1	protein_coding	1/3			chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842605	C C	CCTCTCCA others(5): Show CCTCTCCACGCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG02615.hp1 HG02970.hp2 HG01071.hp2 HG02615.hp1 HG02970.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0004 a0001c0001t0001 a0002c0002t0004	a0001c0001t0001g0001 a0001c0001t0001g0082 a0002c0002t0004g0002 a0001c0001t0001g0001 a0001c0001t0001g0082 a0002c0002t0004g0002	3	300	0.0100	12	c.-46 others(23): Show c.-4612_-4611insCTCTCCACGCCT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4570		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842777	C C	CACGCCTC others(5): Show CACGCCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp1 HG02970.hp2 HG02615.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0082 a0001c0001t0001g0001 a0001c0001t0001g0082	2	300	0.0067	12	c.-44 others(23): Show c.-4440_-4439insACGCCTCTCTCT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4398		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43842821	C C	CACGCCTC others(5): Show CACGCCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01070.hp1 HG01346.hp2 others(26): Show HG00642.hp2 HG01070.hp1 HG01346.hp2 HG01516.hp1 HG02055.hp1 HG02258.hp2 HG02451.hp1 HG02615.hp1 HG02615.hp2 HG02886.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp1 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0002c0008 others(2): Show a0001c0001 a0002c0002 a0002c0008 a0003c0003 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(9): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0008 a0002c0002t0010 a0002c0008t0001 a0003c0003t0002 a0003c0003t0003 a0005c0005t0002	a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0066 others(20): Show a0001c0001t0001g0001 a0001c0001t0001g0039 a0001c0001t0001g0066 a0001c0001t0001g0082 a0001c0001t0002g0063 a0002c0002t0001g0018 a0002c0002t0001g0062 a0002c0002t0001g0065 a0002c0002t0002g0029 a0002c0002t0002g0045 a0002c0002t0003g0077 a0002c0002t0003g0122 a0002c0002t0004g0002 a0002c0002t0004g0033 a0002c0002t0008g0035 a0002c0002t0008g0046 a0002c0002t0010g0024 a0002c0008t0001g0076 a0003c0003t0002g0044 a0003c0003t0003g0022 a0003c0003t0003g0119 a0003c0003t0003g0120 a0005c0005t0002g0064	29	300	0.0967	12	c.-43 others(23): Show c.-4396_-4395insACGCCTCTCTCT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		4354		chr17	TogoVar
CD300LG_chr17_43842176_43868639	43850452	T T	TATTCATT others(5): Show TATTCATTCATTC	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02809.hp2 HG01243.hp2 HG02809.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0003 a0002c0002t0002 a0002c0002t0003	a0002c0002t0002g0041 a0002c0002t0003g0121 a0002c0002t0002g0041 a0002c0002t0003g0121	2	300	0.0067	12	c.379 others(29): Show c.379+1579_379+1590dupCATTCATTCATT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
CD300LG_chr17_43842176_43868639	43867576	A A	ACTTCTTC others(5): Show ACTTCTTCTTCTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00639.hp1 HG01081.hp1 others(19): Show HG00099.hp2 HG00639.hp1 HG01081.hp1 HG01106.hp2 HG01167.hp1 HG01169.hp1 HG01255.hp2 HG01496.hp2 HG01978.hp2 HG02027.hp1 HG02027.hp2 HG02486.hp2 HG02630.hp1 HG03704.hp2 NA18906.hp2 NA18946.hp1 NA18952.hp2 NA19007.hp2 NA19043.hp1 NA19074.hp1 NA19074.hp2 NA19081.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0002 a0002c0002t0003 others(3): Show a0001c0001t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0004 a0002c0002t0014 a0003c0003t0003	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(12): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0104 a0002c0002t0002g0036 a0002c0002t0003g0002 a0002c0002t0004g0002 a0002c0002t0014g0002 a0003c0003t0003g0022	22	300	0.0733	12	c.56 others(23): Show c.5665_*5666insCTTCTTCTTCTT	CD300LG	ENSG00000161649.14	transcript	ENST00000317310.5	protein_coding		3938		chr17	TogoVar
CD302_chr2_159763628_159803208	159764255	T T	TGTGCGCG others(5): Show TGTGCGCGCGCGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0229 a0001c0001t0003g0229	1	414	0.0024	12	c.75 others(23): Show c.7595_*7596insGCGCGCGCGCAC	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding		4372		chr2	TogoVar
CD302_chr2_159763628_159803208	159764255	T T	TGTGTGTG others(5): Show TGTGTGTGCGCGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp1 NA18989.hp2 NA19066.hp1 NA18960.hp1 NA18989.hp2 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0299 a0001c0001t0003g0358 a0001c0001t0003g0368 a0001c0001t0003g0299 a0001c0001t0003g0358 a0001c0001t0003g0368	3	414	0.0073	12	c.75 others(23): Show c.7595_*7596insGCGCGCACACAC	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding		4372		chr2	TogoVar
CD302_chr2_159763628_159803208	159776012	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00609.hp2 others(67): Show HG00438.hp1 HG00438.hp2 HG00609.hp2 HG00673.hp1 HG01496.hp1 HG01884.hp2 HG01975.hp2 HG02015.hp2 HG02074.hp2 HG02155.hp1 HG02273.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02647.hp2 HG03195.hp2 HG03710.hp1 HG03710.hp2 HG04184.hp1 NA18612.hp1 NA18941.hp1 NA18943.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18957.hp2 NA18960.hp2 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18966.hp2 NA18968.hp2 NA18972.hp2 NA18973.hp2 NA18977.hp1 NA18978.hp1 NA18979.hp2 NA18981.hp1 NA18983.hp1 NA18984.hp2 NA18985.hp2 NA18987.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19007.hp2 NA19054.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19072.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 a0001c0001t0023 a0001c0001t0024 a0001c0001t0033	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(55): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0049 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0231 a0001c0001t0003g0253 a0001c0001t0003g0362 a0001c0001t0017g0108 a0001c0001t0017g0110 a0001c0001t0023g0085 a0001c0001t0023g0091 a0001c0001t0024g0023 a0001c0001t0033g0230	70	414	0.1691	12	c.496 others(29): Show c.496+1914_496+1925dupAAAAAAAAAAAA	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	5/5			chr2	TogoVar
CD302_chr2_159763628_159803208	159792422	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02280.hp1 HG03516.hp1 others(1): Show HG02074.hp1 HG02280.hp1 HG03516.hp1 NA19004.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0012 a0001c0002t0002 a0001c0002t0012	a0001c0002t0002g0136 a0001c0002t0002g0141 a0001c0002t0002g0192 others(1): Show a0001c0002t0002g0136 a0001c0002t0002g0141 a0001c0002t0002g0192 a0001c0002t0012g0128	4	414	0.0097	12	c.67+ others(27): Show c.67+5698_67+5709dupCACACACACACA	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	1/5			chr2	TogoVar
CD302_chr2_159763628_159803208	159794303	A A	AAAATAAA others(5): Show AAAATAAAATAAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01123.hp2 HG01167.hp2 others(4): Show HG00735.hp1 HG01123.hp2 HG01167.hp2 HG01243.hp1 HG01258.hp2 HG01975.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 others(4): Show a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0066 a0001c0001t0001g0109	7	414	0.0169	12	c.67+ others(27): Show c.67+3828_67+3829insATTATTTTATTT	CD302	ENSG00000241399.7	transcript	ENST00000259053.6	protein_coding	1/5			chr2	TogoVar
CD320_chr19_8297127_8313358	8299186	C C	CCAAAAAA others(5): Show CCAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	390	0.0026	12	c.32 others(23): Show c.3276_*3277insTTTTTTTTTTTG	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		2940		chr19	TogoVar
CD320_chr19_8297127_8313358	8299564	A A	AAAATAAA others(5): Show AAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG03195.hp1 NA19043.hp1 HG02922.hp2 HG03195.hp1 NA19043.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0006 a0002c0002t0002g0007 a0001c0001t0001g0006 a0002c0002t0002g0007	3	390	0.0077	12	c.28 others(23): Show c.2898_*2899insATTTATTTATTT	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		2562		chr19	TogoVar
CD320_chr19_8297127_8313358	8299652	T T	TCACACAC others(5): Show TCACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	390	0.0026	12	c.28 others(23): Show c.2810_*2811insTGTGTGTGTGTG	CD320	ENSG00000167775.11	transcript	ENST00000301458.10	protein_coding		2474		chr19	TogoVar
CD34_chr1_207875972_207916125	207898031	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01934.hp1 HG02083.hp2 others(13): Show HG01257.hp2 HG01934.hp1 HG02083.hp2 HG02257.hp2 HG02615.hp2 HG02698.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG03540.hp1 HG03579.hp2 NA18939.hp2 NA18971.hp2 NA18978.hp2 NA19063.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0006c0007	a0001c0001t0003 a0001c0001t0009 a0001c0001t0012 others(6): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0012 a0001c0001t0016 a0001c0001t0021 a0001c0001t0031 a0001c0004t0026 a0002c0002t0004 a0006c0007t0071	a0001c0001t0003g0098 a0001c0001t0003g0112 a0001c0001t0003g0119 others(9): Show a0001c0001t0003g0098 a0001c0001t0003g0112 a0001c0001t0003g0119 a0001c0001t0009g0110 a0001c0001t0009g0111 a0001c0001t0012g0019 a0001c0001t0016g0157 a0001c0001t0021g0067 a0001c0001t0031g0245 a0001c0004t0026g0124 a0002c0002t0004g0071 a0006c0007t0071g0086	16	420	0.0381	12	c.517 others(27): Show c.517-470_517-459dupTAAATAAATAAA	CD34	ENSG00000174059.17	transcript	ENST00000310833.12	protein_coding	3/7			chr1	TogoVar
CD34_chr1_207875972_207916125	207906844	C C	CAAATAAA others(5): Show CAAATAAATAAAT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02080.hp2 NA18943.hp2 HG00673.hp2 HG02080.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0163 a0001c0001t0002g0047 a0001c0001t0002g0163	3	420	0.0071	12	c.79+ others(27): Show c.79+4146_79+4157dupATTTATTTATTT	CD34	ENSG00000174059.17	transcript	ENST00000310833.12	protein_coding	1/7			chr1	TogoVar
CD36_chr7_80633642_80684274	80647258	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03041.hp2 NA19088.hp1 HG02723.hp1 HG03041.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0038 a0001c0001t0045 a0001c0001t0001 a0001c0001t0038 a0001c0001t0045	a0001c0001t0001g0128 a0001c0001t0038g0130 a0001c0001t0045g0129 a0001c0001t0001g0128 a0001c0001t0038g0130 a0001c0001t0045g0129	3	392	0.0077	12	c.120 others(27): Show c.120+412_120+423dupGTGTGTGTGTGT	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CD36_chr7_80633642_80684274	80667747	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0155 a0001c0001t0047g0155	1	392	0.0026	12	c.748 others(29): Show c.748+1268_748+1279dupTTTTTTTTTTTT	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr7	TogoVar
CD36_chr7_80633642_80684274	80683150	A A	ATACTTAT others(5): Show ATACTTATATATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp2 HG03195.hp1 HG03834.hp1 others(32): Show HG00673.hp2 HG03195.hp1 HG03834.hp1 HG04184.hp1 NA18940.hp2 NA18945.hp2 NA18946.hp2 NA18953.hp1 NA18955.hp2 NA18956.hp1 NA18960.hp2 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18971.hp1 NA18978.hp1 NA18983.hp1 NA18990.hp2 NA18999.hp1 NA19001.hp2 NA19006.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19057.hp1 NA19060.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19079.hp2 NA19087.hp2 NA19088.hp2	a0001 a0004 a0009 a0001 a0004 a0009	a0001c0001 a0004c0007 a0009c0013 a0001c0001 a0004c0007 a0009c0013	a0001c0001t0004 a0001c0001t0022 a0001c0001t0034 others(4): Show a0001c0001t0004 a0001c0001t0022 a0001c0001t0034 a0001c0001t0048 a0001c0001t0053 a0004c0007t0004 a0009c0013t0051	a0001c0001t0004g0007 a0001c0001t0004g0014 a0001c0001t0004g0024 others(25): Show a0001c0001t0004g0007 a0001c0001t0004g0014 a0001c0001t0004g0024 a0001c0001t0004g0050 a0001c0001t0004g0052 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0057 a0001c0001t0004g0058 a0001c0001t0004g0064 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0072 a0001c0001t0004g0073 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0158 a0001c0001t0004g0162 a0001c0001t0004g0165 a0001c0001t0004g0179 a0001c0001t0022g0070 a0001c0001t0022g0286 a0001c0001t0034g0068 a0001c0001t0048g0181 a0001c0001t0053g0225 a0004c0007t0004g0071 a0004c0007t0004g0074 a0009c0013t0051g0284	35	392	0.0893	12	c.67 others(23): Show c.6767_*6768insTACTTATATATG	CD36	ENSG00000135218.19	transcript	ENST00000447544.7	protein_coding		3877		chr7	TogoVar
CD38_chr4_15773328_15858232	15826459	G G	GCACGCAC others(5): Show GCACGCACACACA	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0068 a0001c0001t0017g0068	1	344	0.0029	12	c.499 others(29): Show c.499+1446_499+1447insGCACACACACAC	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15826459	G G	GCACGCGC others(5): Show GCACGCGCACACA	intron_variant intron_variant	MODIFIER	HG00408.hp2 NA18984.hp1 HG00408.hp2 NA18984.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0012 a0001c0002t0004 a0001c0002t0012	a0001c0002t0004g0080 a0001c0002t0012g0082 a0001c0002t0004g0080 a0001c0002t0012g0082	2	344	0.0058	12	c.499 others(29): Show c.499+1446_499+1447insGCGCACACACAC	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD38_chr4_15773328_15858232	15847595	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01928.hp2 HG02148.hp1 others(8): Show HG00408.hp2 HG01928.hp2 HG02148.hp1 HG02965.hp1 HG03471.hp1 NA18522.hp2 NA18942.hp2 NA18944.hp1 NA18984.hp1 NA19064.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0034 a0001c0002t0001 others(6): Show a0001c0001t0004 a0001c0001t0034 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0007 a0001c0002t0012 a0001c0002t0027 a0001c0002t0029	a0001c0001t0004g0066 a0001c0001t0034g0110 a0001c0002t0001g0090 others(8): Show a0001c0001t0004g0066 a0001c0001t0034g0110 a0001c0002t0001g0090 a0001c0002t0004g0080 a0001c0002t0005g0073 a0001c0002t0005g0094 a0001c0002t0005g0095 a0001c0002t0007g0086 a0001c0002t0012g0082 a0001c0002t0027g0072 a0001c0002t0029g0164	11	344	0.0320	12	c.840 others(27): Show c.840-927_840-916dupAAAAAAAAAAAA	CD38	ENSG00000004468.13	transcript	ENST00000226279.8	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
CD3E_chr11_118299730_118321173	118306486	G G	GATAAATA others(5): Show GATAAATAAATAA	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp1 HG00140.hp2 HG00544.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0072 a0001c0001t0002g0071 a0001c0001t0001g0072 a0001c0001t0002g0071	2	416	0.0048	12	c.50- others(25): Show c.50-772_50-761dupTAAATAAATAAA	CD3E	ENSG00000198851.10	transcript	ENST00000361763.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD3G_chr11_118339344_118360161	118357799	A A	ATCCCTGG others(5): Show ATCCCTGGTGACC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19091.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0001	1	442	0.0023	12	c.46 others(23): Show c.4699_*4700insTCCCTGGTGACC	CD3G	ENSG00000160654.11	transcript	ENST00000532917.3	protein_coding		2639		chr11	TogoVar
CD40LG_chrX_136643158_136665390	136660105	A A	AACACACA others(5): Show AACACACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0012 a0001c0001t0066g0012	1	287	0.0035	12	c.73 others(21): Show c.732_*743dupCACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	TogoVar
CD40LG_chrX_136643158_136665390	136660107	C C	CACACACA others(5): Show CACACACACATAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02451.hp1 HG02895.hp1 HG02897.hp2 HG02451.hp1 HG02895.hp1 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0079 a0001c0001t0084 a0001c0001t0088 a0001c0001t0079 a0001c0001t0084 a0001c0001t0088	a0001c0001t0079g0028 a0001c0001t0084g0003 a0001c0001t0088g0003 a0001c0001t0079g0028 a0001c0001t0084g0003 a0001c0001t0088g0003	3	287	0.0105	12	c.70 others(21): Show c.701_*702insTAAACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	TogoVar
CD40_chr20_46113314_46134858	46124751	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	416	0.0024	12	c.497 others(29): Show c.497+1554_497+1565dupTTTTTTTTTTTT	CD40	ENSG00000101017.15	transcript	ENST00000372285.8	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr20	TogoVar
CD40_chr20_46113314_46134858	46131749	A A	ATTTCTTT others(5): Show ATTTCTTTCTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG02280.hp2 HG03098.hp2 others(2): Show HG01884.hp1 HG02280.hp2 HG03098.hp2 HG03516.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0003g0026 others(2): Show a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0003g0026 a0001c0001t0003g0043 a0001c0001t0003g0147	5	416	0.0120	12	c.27 others(23): Show c.2709_*2710insTTTCTTTCTTTC	CD40	ENSG00000101017.15	transcript	ENST00000372285.8	protein_coding		1892		chr20	TogoVar
CD44_chr11_35134171_35237402	35157321	G G	GTCTATCT others(5): Show GTCTATCTACCTA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03225.hp1 HG02647.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0005 a0001c0008t0002 a0001c0001t0005 a0001c0008t0002	a0001c0001t0005g0170 a0001c0008t0002g0347 a0001c0001t0005g0170 a0001c0008t0002g0347	2	378	0.0053	12	c.67+ others(29): Show c.67+17959_67+17960insCCTATCTATCTA	CD44	ENSG00000026508.21	transcript	ENST00000428726.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD44_chr11_35134171_35237402	35157321	G G	GTCTATCT others(5): Show GTCTATCTATCTA	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0310 a0001c0001t0002g0310	1	378	0.0027	12	c.67+ others(29): Show c.67+17986_67+17997dupTATCTATCTATC	CD44	ENSG00000026508.21	transcript	ENST00000428726.8	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD44_chr11_35134171_35237402	35181670	A A	ATATATAT others(5): Show ATATATATATATT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0093 a0001c0001t0019g0093	1	378	0.0027	12	c.367 others(29): Show c.367+1279_367+1290dupATATATATTTAT	CD44	ENSG00000026508.21	transcript	ENST00000428726.8	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD44_chr11_35134171_35237402	35213698	G G	GTGGAGAT others(5): Show GTGGAGATGGTGA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01256.hp1 HG01258.hp2 others(2): Show HG01099.hp2 HG01256.hp1 HG01258.hp2 HG02300.hp2 NA20129.hp1	a0001 a0007 a0001 a0007	a0001c0002 a0001c0010 a0007c0016 a0001c0002 a0001c0010 a0007c0016	a0001c0002t0003 a0001c0010t0007 a0007c0016t0011 a0001c0002t0003 a0001c0010t0007 a0007c0016t0011	a0001c0002t0003g0199 a0001c0010t0007g0133 a0001c0010t0007g0161 others(2): Show a0001c0002t0003g0199 a0001c0010t0007g0133 a0001c0010t0007g0161 a0001c0010t0007g0162 a0007c0016t0011g0055	5	378	0.0132	12	c.181 others(31): Show c.1811-1151_1811-1150insAGATGGTGATGG	CD44	ENSG00000026508.21	transcript	ENST00000428726.8	protein_coding	14/17		INFO_REALIGN_3_PRIME	chr11	TogoVar
CD46_chr1_207747054_207800504	207779913	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 NA18942.hp2 NA18946.hp2 HG03130.hp1 NA18942.hp2 NA18946.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0003 a0001c0001t0001 a0003c0003t0003	a0001c0001t0001g0045 a0001c0001t0001g0094 a0003c0003t0003g0192 a0001c0001t0001g0045 a0001c0001t0001g0094 a0003c0003t0003g0192	3	380	0.0079	12	c.944 others(29): Show c.944-3371_944-3360dupTTTTTTTTTTTT	CD46	ENSG00000117335.21	transcript	ENST00000367042.6	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
CD4_chr12_6784528_6825799	6793970	A A	ATATCTAT others(5): Show ATATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(61): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00597.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01255.hp1 HG01255.hp2 HG01928.hp2 HG01943.hp2 HG02027.hp2 HG02080.hp1 HG02129.hp2 HG02148.hp1 HG02257.hp2 HG02293.hp1 HG02523.hp2 HG02572.hp2 HG02683.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02970.hp2 HG02976.hp1 HG03098.hp1 HG03098.hp2 HG03239.hp2 HG03471.hp1 HG03490.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18939.hp2 NA18945.hp1 NA18947.hp2 NA18955.hp2 NA18957.hp2 NA18967.hp2 NA18972.hp2 NA18974.hp1 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18984.hp2 NA18989.hp1 NA18993.hp1 NA18998.hp2 NA19003.hp1 NA19058.hp2 NA19059.hp1 NA19063.hp2 NA19067.hp1 NA19067.hp2 NA19072.hp2 NA19091.hp1 NA20752.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0012	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0003c0005 a0012c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0002t0003 a0001c0004t0006 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0003c0005t0004 a0012c0019t0004	a0001c0001t0001g0111 a0001c0001t0001g0117 a0001c0001t0001g0122 others(59): Show a0001c0001t0001g0111 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0176 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0221 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0262 a0001c0001t0001g0316 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0142 a0001c0001t0002g0175 a0001c0001t0002g0217 a0001c0001t0002g0220 a0001c0001t0002g0261 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0317 a0001c0001t0004g0002 a0001c0001t0004g0003 a0001c0001t0004g0108 a0001c0001t0004g0109 a0001c0001t0004g0118 a0001c0001t0004g0123 a0001c0001t0004g0145 a0001c0001t0004g0172 a0001c0001t0004g0173 a0001c0001t0004g0177 a0001c0001t0004g0219 a0001c0001t0004g0242 a0001c0001t0004g0245 a0001c0001t0004g0246 a0001c0001t0009g0110 a0001c0002t0003g0054 a0001c0002t0003g0113 a0001c0002t0003g0114 a0001c0002t0003g0150 a0001c0002t0003g0171 a0001c0002t0003g0222 a0001c0002t0003g0307 a0001c0004t0006g0116 a0002c0003t0001g0174 a0002c0003t0002g0112 a0002c0003t0002g0115 a0002c0003t0002g0216 a0002c0003t0002g0249 a0002c0003t0002g0259 a0002c0003t0005g0026 a0003c0005t0004g0433 a0012c0019t0004g0070	64	442	0.1448	12	c.-68 others(29): Show c.-68+4333_-68+4344dupTATCTATCTATC	CD4	ENSG00000010610.10	transcript	ENST00000011653.9	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr12	TogoVar

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