Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CDH19_chr18_66496083_66609090	66524542	G G	GTGTATAT others(5): Show GTGTATATATATA	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18971.hp1 NA19001.hp1 others(3): Show NA18949.hp2 NA18971.hp1 NA19001.hp1 NA19006.hp2 NA19055.hp1 NA19087.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0008 a0001c0002t0018 a0001c0002t0001 a0001c0002t0008 a0001c0002t0018	a0001c0002t0001g0259 a0001c0002t0001g0260 a0001c0002t0001g0262 others(3): Show a0001c0002t0001g0259 a0001c0002t0001g0260 a0001c0002t0001g0262 a0001c0002t0008g0261 a0001c0002t0018g0257 a0001c0002t0018g0340	6	354	0.0170	12	c.145 others(31): Show c.1458+5302_1458+5303insTATATATATACA	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	9/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66524569	T T	TATATATA others(5): Show TATATATATATAA	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp1 HG00741.hp2 others(10): Show HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01255.hp1 HG01943.hp1 HG02602.hp2 HG03209.hp1 HG06807.hp2 NA18522.hp2 NA18960.hp2 NA18985.hp1 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0004 a0001c0002t0001 a0001c0002t0008 others(3): Show a0001c0001t0004 a0001c0002t0001 a0001c0002t0008 a0001c0002t0025 a0001c0003t0004 a0001c0003t0019	a0001c0001t0004g0165 a0001c0002t0001g0030 a0001c0002t0001g0043 others(10): Show a0001c0001t0004g0165 a0001c0002t0001g0030 a0001c0002t0001g0043 a0001c0002t0001g0061 a0001c0002t0001g0140 a0001c0002t0001g0240 a0001c0002t0001g0299 a0001c0002t0001g0317 a0001c0002t0001g0326 a0001c0002t0008g0198 a0001c0002t0025g0004 a0001c0003t0004g0038 a0001c0003t0019g0028	13	354	0.0367	12	c.145 others(31): Show c.1458+5275_1458+5276insTTATATATATAT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	9/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66532489	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02647.hp2 HG02723.hp1 others(6): Show HG00642.hp2 HG02647.hp2 HG02723.hp1 HG02738.hp2 HG02922.hp2 HG02965.hp2 HG03041.hp2 HG03654.hp1 NA18981.hp2	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0015	a0001c0001 a0001c0002 a0002c0004 others(2): Show a0001c0001 a0001c0002 a0002c0004 a0010c0020 a0015c0015	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001 a0002c0004t0005 a0002c0004t0028 a0010c0020t0036 a0015c0015t0004	a0001c0001t0002g0133 a0001c0001t0004g0107 a0001c0001t0006g0013 others(6): Show a0001c0001t0002g0133 a0001c0001t0004g0107 a0001c0001t0006g0013 a0001c0001t0006g0111 a0001c0002t0001g0202 a0002c0004t0005g0017 a0002c0004t0028g0178 a0010c0020t0036g0009 a0015c0015t0004g0098	9	354	0.0254	12	c.133 others(31): Show c.1336+2485_1336+2496dupGTGTGTGTGTGT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	8/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66532489	T T	TACACTCA others(5): Show TACACTCACACAC	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0034 a0003c0005t0034	a0003c0005t0034g0113 a0003c0005t0034g0113	1	354	0.0028	12	c.133 others(31): Show c.1336+2496_1336+2497insGTGTGTGAGTGT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	8/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66533213	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0130 a0001c0001t0009g0130	1	354	0.0028	12	c.133 others(31): Show c.1336+1761_1336+1772dupGTGTGTGTGTGT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	8/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66573893	C C	CCACACAC others(5): Show CCACACACACACA	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0066 a0001c0002t0001g0066	1	354	0.0028	12	c.-11 others(31): Show c.-112-1589_-112-1578dupTGTGTGTGTGTG	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	1/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66588605	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp1 HG01167.hp2 others(4): Show HG00280.hp2 HG00323.hp1 HG01167.hp2 HG01346.hp2 HG02293.hp2 HG03098.hp2 NA19084.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0008 a0001c0010 others(1): Show a0001c0001 a0001c0008 a0001c0010 a0002c0004	a0001c0001t0002 a0001c0008t0003 a0001c0010t0001 others(2): Show a0001c0001t0002 a0001c0008t0003 a0001c0010t0001 a0002c0004t0005 a0002c0004t0012	a0001c0001t0002g0274 a0001c0001t0002g0287 a0001c0001t0002g0335 others(4): Show a0001c0001t0002g0274 a0001c0001t0002g0287 a0001c0001t0002g0335 a0001c0008t0003g0302 a0001c0010t0001g0280 a0002c0004t0005g0276 a0002c0004t0012g0279	7	354	0.0198	12	c.-11 others(33): Show c.-113+15348_-113+15349insATATATATATAT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	1/11			chr18	TogoVar
CDH19_chr18_66496083_66609090	66597162	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(76): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01517.hp1 HG01884.hp1 HG01943.hp2 HG01978.hp1 HG02280.hp1 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02738.hp2 HG03098.hp2 HG03453.hp2 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03834.hp2 HG03927.hp2 HG04199.hp2 NA18522.hp1 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18949.hp2 NA18951.hp2 NA18956.hp1 NA18957.hp1 NA18965.hp2 NA18968.hp2 NA18970.hp1 NA18971.hp1 NA18978.hp2 NA18985.hp2 NA18988.hp2 NA18991.hp2 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19055.hp1 NA19058.hp2 NA19062.hp1 NA19064.hp2 NA19077.hp1 NA19084.hp1 NA19087.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0008 a0009 a0012	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0010 a0001c0011 a0002c0004 a0003c0005 a0008c0017 a0009c0019 a0012c0022	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(19): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0002t0001 a0001c0002t0008 a0001c0002t0018 a0001c0003t0004 a0001c0008t0003 a0001c0010t0001 a0001c0011t0002 a0002c0004t0005 a0002c0004t0012 a0003c0005t0022 a0008c0017t0001 a0009c0019t0021 a0012c0022t0008	a0001c0001t0002g0254 a0001c0001t0002g0274 a0001c0001t0002g0287 others(76): Show a0001c0001t0002g0254 a0001c0001t0002g0274 a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0289 a0001c0001t0002g0301 a0001c0001t0002g0309 a0001c0001t0002g0312 a0001c0001t0002g0321 a0001c0001t0002g0333 a0001c0001t0002g0334 a0001c0001t0002g0335 a0001c0001t0002g0337 a0001c0001t0003g0290 a0001c0001t0003g0300 a0001c0001t0003g0315 a0001c0001t0003g0328 a0001c0001t0003g0336 a0001c0001t0003g0338 a0001c0001t0003g0339 a0001c0001t0006g0255 a0001c0001t0009g0322 a0001c0001t0010g0250 a0001c0001t0010g0251 a0001c0001t0016g0327 a0001c0001t0016g0342 a0001c0001t0030g0295 a0001c0001t0031g0294 a0001c0001t0033g0341 a0001c0002t0001g0258 a0001c0002t0001g0259 a0001c0002t0001g0260 a0001c0002t0001g0262 a0001c0002t0001g0263 a0001c0002t0001g0273 a0001c0002t0001g0281 a0001c0002t0001g0286 a0001c0002t0001g0293 a0001c0002t0001g0299 a0001c0002t0001g0307 a0001c0002t0001g0311 a0001c0002t0001g0316 a0001c0002t0001g0317 a0001c0002t0001g0318 a0001c0002t0001g0326 a0001c0002t0001g0330 a0001c0002t0001g0332 a0001c0002t0001g0343 a0001c0002t0008g0261 a0001c0002t0008g0325 a0001c0002t0018g0340 a0001c0003t0004g0264 a0001c0003t0004g0292 a0001c0003t0004g0296 a0001c0003t0004g0297 a0001c0008t0003g0302 a0001c0008t0003g0303 a0001c0008t0003g0304 a0001c0010t0001g0280 a0001c0010t0001g0308 a0001c0011t0002g0306 a0002c0004t0005g0017 a0002c0004t0005g0252 a0002c0004t0005g0275 a0002c0004t0005g0276 a0002c0004t0005g0277 a0002c0004t0005g0278 a0002c0004t0005g0283 a0002c0004t0005g0284 a0002c0004t0005g0285 a0002c0004t0005g0298 a0002c0004t0005g0329 a0002c0004t0012g0279 a0002c0004t0012g0282 a0002c0004t0012g0305 a0003c0005t0022g0346 a0008c0017t0001g0331 a0009c0019t0021g0310 a0012c0022t0008g0291	79	354	0.2232	12	c.-11 others(31): Show c.-113+6780_-113+6791dupTTTTTTTTTTTT	CDH19	ENSG00000071991.9	transcript	ENST00000262150.7	protein_coding	1/11			chr18	TogoVar
CDH1_chr16_68732292_68840537	68738964	T T	TTTTTTTT others(5): Show TTTTTTTTTTTTA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00323.hp2 others(47): Show HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01123.hp2 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp2 HG01978.hp2 HG01993.hp2 HG02083.hp1 HG02132.hp2 HG02258.hp2 HG02523.hp2 HG02602.hp1 HG02602.hp2 HG03139.hp2 HG03239.hp2 HG03654.hp1 HG03831.hp1 NA18946.hp2 NA18964.hp1 NA18967.hp2 NA18968.hp2 NA18971.hp2 NA18983.hp1 NA18985.hp1 NA19030.hp1 NA19060.hp2 NA19063.hp2 NA19070.hp1 NA19084.hp2 NA19087.hp1 NA19089.hp1 NA20752.hp1 NA20752.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0009 a0001c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0016 a0001c0002t0001 a0001c0002t0014 a0001c0003t0017 a0001c0004t0004 a0001c0009t0001 a0001c0015t0001	a0001c0001t0001g0189 a0001c0001t0001g0207 a0001c0001t0001g0210 others(47): Show a0001c0001t0001g0189 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0230 a0001c0001t0001g0235 a0001c0001t0002g0186 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0198 a0001c0001t0002g0213 a0001c0001t0002g0215 a0001c0001t0002g0217 a0001c0001t0003g0199 a0001c0001t0003g0221 a0001c0001t0007g0197 a0001c0001t0007g0204 a0001c0001t0007g0214 a0001c0001t0016g0191 a0001c0002t0001g0187 a0001c0002t0001g0188 a0001c0002t0001g0190 a0001c0002t0001g0194 a0001c0002t0001g0195 a0001c0002t0001g0196 a0001c0002t0001g0201 a0001c0002t0001g0202 a0001c0002t0001g0203 a0001c0002t0001g0206 a0001c0002t0001g0208 a0001c0002t0001g0218 a0001c0002t0001g0219 a0001c0002t0001g0220 a0001c0002t0001g0222 a0001c0002t0001g0223 a0001c0002t0001g0224 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0001g0227 a0001c0002t0001g0228 a0001c0002t0001g0229 a0001c0002t0001g0231 a0001c0002t0001g0232 a0001c0002t0001g0233 a0001c0002t0014g0216 a0001c0003t0017g0234 a0001c0004t0004g0200 a0001c0009t0001g0205 a0001c0015t0001g0209	50	316	0.1582	12	c.163 others(27): Show c.163+553_163+554insTTTTTTTTTTTA	CDH1	ENSG00000039068.20	transcript	ENST00000261769.10	protein_coding	2/15			chr16	TogoVar
CDH1_chr16_68732292_68840537	68751493	C C	CTTATTTA others(5): Show CTTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03139.hp1 NA19043.hp2 HG02145.hp1 HG03139.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0292 a0001c0001t0002g0301 a0001c0001t0002g0303 a0001c0001t0002g0292 a0001c0001t0002g0301 a0001c0001t0002g0303	3	316	0.0095	12	c.163 others(31): Show c.163+13098_163+13109dupTTTATTTATTTA	CDH1	ENSG00000039068.20	transcript	ENST00000261769.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH1_chr16_68732292_68840537	68755282	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02897.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0101 a0001c0002t0001g0101	1	316	0.0032	12	c.163 others(31): Show c.163+16882_163+16893dupAAAAAAAAAAAA	CDH1	ENSG00000039068.20	transcript	ENST00000261769.10	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
CDH20_chr18_61328430_61560779	61339681	A A	ATTTTTTT others(5): Show ATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02602.hp2 HG03017.hp1 others(1): Show HG01256.hp2 HG02602.hp2 HG03017.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0007 a0001c0002t0004 a0001c0001t0001 a0001c0001t0007 a0001c0002t0004	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0007g0011 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0007g0011 a0001c0002t0004g0009	4	280	0.0143	12	c.-15 others(31): Show c.-153+5867_-153+5878dupTTTTTTTTTTTT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61340226	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02015.hp2 HG02040.hp1 others(33): Show HG00099.hp1 HG02015.hp2 HG02040.hp1 HG02145.hp2 HG02258.hp2 HG02451.hp1 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02895.hp2 HG02922.hp1 HG02970.hp2 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03540.hp2 HG03579.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18948.hp1 NA18959.hp1 NA18959.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19064.hp2 NA19074.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(9): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0010 a0001c0011 a0001c0013 a0001c0019 a0001c0025 a0002c0003 a0002c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0013 a0001c0004t0008 a0001c0005t0008 a0001c0005t0026 a0001c0006t0001 a0001c0006t0003 a0001c0010t0001 a0001c0011t0001 a0001c0013t0015 a0001c0019t0004 a0001c0025t0001 a0002c0003t0001 a0002c0009t0004	a0001c0001t0001g0032 a0001c0001t0001g0053 a0001c0001t0001g0097 others(33): Show a0001c0001t0001g0032 a0001c0001t0001g0053 a0001c0001t0001g0097 a0001c0001t0001g0104 a0001c0001t0001g0158 a0001c0001t0001g0163 a0001c0001t0002g0003 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0219 a0001c0001t0003g0201 a0001c0001t0004g0159 a0001c0001t0007g0160 a0001c0001t0010g0126 a0001c0002t0001g0050 a0001c0002t0001g0100 a0001c0002t0001g0106 a0001c0002t0002g0027 a0001c0002t0002g0277 a0001c0002t0003g0108 a0001c0002t0003g0132 a0001c0002t0006g0218 a0001c0002t0013g0033 a0001c0004t0008g0107 a0001c0004t0008g0278 a0001c0005t0008g0054 a0001c0005t0026g0031 a0001c0006t0001g0105 a0001c0006t0003g0200 a0001c0010t0001g0051 a0001c0011t0001g0216 a0001c0013t0015g0279 a0001c0019t0004g0162 a0001c0025t0001g0052 a0002c0003t0001g0161 a0002c0009t0004g0157	36	280	0.1286	12	c.-15 others(31): Show c.-153+6409_-153+6410insTTTTTTTTTTTT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61347287	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02486.hp1 HG02922.hp1 others(1): Show HG00735.hp1 HG02486.hp1 HG02922.hp1 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0020 a0001c0001 a0001c0005 a0001c0020	a0001c0001t0002 a0001c0005t0009 a0001c0020t0002 a0001c0001t0002 a0001c0005t0009 a0001c0020t0002	a0001c0001t0002g0003 a0001c0001t0002g0238 a0001c0005t0009g0004 others(1): Show a0001c0001t0002g0003 a0001c0001t0002g0238 a0001c0005t0009g0004 a0001c0020t0002g0005	4	280	0.0143	12	c.-15 others(33): Show c.-153+13482_-153+13493dupTATATATATATA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61396040	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01070.hp2 HG01496.hp2 others(13): Show HG01070.hp1 HG01070.hp2 HG01496.hp2 HG02451.hp1 HG02698.hp2 HG02895.hp2 HG03130.hp1 HG03139.hp1 HG03540.hp2 HG03688.hp1 HG04199.hp1 NA18522.hp1 NA18906.hp1 NA18965.hp1 NA19002.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0025 a0001c0028	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0011 a0001c0001t0020 a0001c0002t0001 a0001c0004t0008 a0001c0006t0001 a0001c0006t0002 a0001c0025t0001 a0001c0028t0003	a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0099 others(13): Show a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0099 a0001c0001t0002g0260 a0001c0001t0010g0136 a0001c0001t0011g0182 a0001c0001t0020g0164 a0001c0002t0001g0018 a0001c0002t0001g0100 a0001c0002t0001g0106 a0001c0004t0008g0107 a0001c0006t0001g0082 a0001c0006t0001g0105 a0001c0006t0002g0253 a0001c0025t0001g0052 a0001c0028t0003g0135	16	280	0.0571	12	c.-15 others(33): Show c.-153+62214_-153+62225dupGTGTGTGTGTGT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61417578	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02258.hp1 HG02258.hp2 others(4): Show HG00642.hp1 HG02258.hp1 HG02258.hp2 HG02965.hp1 HG03540.hp1 HG03669.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 a0001c0002t0001	a0001c0001t0001g0053 a0001c0001t0001g0097 a0001c0001t0001g0251 others(4): Show a0001c0001t0001g0053 a0001c0001t0001g0097 a0001c0001t0001g0251 a0001c0001t0003g0207 a0001c0001t0003g0212 a0001c0001t0014g0049 a0001c0002t0001g0056	7	280	0.0250	12	c.-15 others(33): Show c.-152-72808_-152-72797dupAAAAAAAAAAAA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61465754	C C	CATTTCTA others(5): Show CATTTCTAATTCT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02615.hp1 NA19043.hp2 HG02572.hp2 HG02615.hp1 NA19043.hp2	a0001 a0001	a0001c0007 a0001c0011 a0001c0007 a0001c0011	a0001c0007t0021 a0001c0011t0001 a0001c0011t0002 a0001c0007t0021 a0001c0011t0001 a0001c0011t0002	a0001c0007t0021g0043 a0001c0011t0001g0216 a0001c0011t0002g0236 a0001c0007t0021g0043 a0001c0011t0001g0216 a0001c0011t0002g0236	3	280	0.0107	12	c.-15 others(33): Show c.-152-24634_-152-24623dupTTTCTAATTCTA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61488081	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01257.hp2 HG02071.hp1 others(11): Show HG00438.hp2 HG01257.hp2 HG02071.hp1 HG02135.hp1 HG02148.hp1 HG02155.hp2 HG02165.hp2 HG02486.hp1 HG03669.hp2 NA18963.hp1 NA18965.hp2 NA18995.hp2 NA19002.hp1 NA19091.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0023 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0024 a0001c0002t0005 a0001c0005t0009 a0001c0023t0004 a0002c0003t0005	a0001c0001t0001g0083 a0001c0001t0003g0207 a0001c0001t0004g0066 others(11): Show a0001c0001t0001g0083 a0001c0001t0003g0207 a0001c0001t0004g0066 a0001c0001t0004g0071 a0001c0001t0004g0086 a0001c0001t0004g0159 a0001c0001t0004g0165 a0001c0001t0010g0136 a0001c0001t0010g0156 a0001c0001t0024g0117 a0001c0002t0005g0197 a0001c0005t0009g0004 a0001c0023t0004g0204 a0002c0003t0005g0025	14	280	0.0500	12	c.-15 others(31): Show c.-152-2318_-152-2307dupATATATATATAT	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61527366	A A	AATAGATA others(5): Show AATAGATAGATAG	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02129.hp2 HG02630.hp1 others(1): Show HG01978.hp2 HG02129.hp2 HG02630.hp1 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0003 a0001c0002t0001 a0001c0004t0009 a0001c0001t0003 a0001c0002t0001 a0001c0004t0009	a0001c0001t0003g0128 a0001c0002t0001g0111 a0001c0002t0001g0196 others(1): Show a0001c0001t0003g0128 a0001c0002t0001g0111 a0001c0002t0001g0196 a0001c0004t0009g0239	4	280	0.0143	12	c.101 others(29): Show c.1018-563_1018-552dupTAGATAGATAGA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61528446	G G	GACACACA others(5): Show GACACACATACAC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02055.hp2 HG02109.hp1 others(11): Show HG01106.hp2 HG02055.hp2 HG02109.hp1 HG02258.hp2 HG02451.hp2 HG02896.hp1 HG02897.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03471.hp2 HG03834.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0002 a0001c0010 others(3): Show a0001c0001 a0001c0002 a0001c0010 a0002c0003 a0003c0017 a0008c0022	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0003 a0001c0010t0001 a0002c0003t0002 a0003c0017t0025 a0008c0022t0016	a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0053 others(11): Show a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0053 a0001c0001t0001g0104 a0001c0001t0001g0188 a0001c0001t0002g0026 a0001c0001t0002g0030 a0001c0001t0002g0242 a0001c0002t0001g0096 a0001c0002t0003g0109 a0001c0010t0001g0252 a0002c0003t0002g0265 a0003c0017t0025g0057 a0008c0022t0016g0170	14	280	0.0500	12	c.127 others(29): Show c.1271+233_1271+234insTACACACACACA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH20_chr18_61328430_61560779	61528448	C C	CACACATA others(5): Show CACACATACACAT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0098 a0001c0002t0001g0098	1	280	0.0036	12	c.127 others(29): Show c.1271+233_1271+234insTACACATACACA	CDH20	ENSG00000101542.10	transcript	ENST00000262717.9	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr18	TogoVar
CDH22_chr20_46168739_46313498	46181609	T T	TTCCCTCC others(5): Show TTCCCTCCCTCCC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG00642.hp2 others(21): Show HG00140.hp2 HG00639.hp2 HG00642.hp2 HG01069.hp1 HG01106.hp1 HG01175.hp1 HG01261.hp2 HG01884.hp1 HG01891.hp2 HG02145.hp2 HG02165.hp1 HG02572.hp1 HG02630.hp1 HG02647.hp2 HG02735.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp1 HG03041.hp2 HG03516.hp2 HG03579.hp1 HG03688.hp1 HG04199.hp1 NA18522.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0009 a0001c0001 a0002c0003 a0004c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0002c0003t0001 a0004c0009t0002	a0001c0001t0001g0030 a0001c0001t0001g0083 a0001c0001t0001g0099 others(21): Show a0001c0001t0001g0030 a0001c0001t0001g0083 a0001c0001t0001g0099 a0001c0001t0001g0122 a0001c0001t0001g0178 a0001c0001t0001g0200 a0001c0001t0001g0235 a0001c0001t0001g0290 a0001c0001t0002g0037 a0001c0001t0002g0049 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0226 a0001c0001t0002g0287 a0001c0001t0002g0302 a0001c0001t0003g0014 a0001c0001t0003g0171 a0001c0001t0005g0004 a0001c0001t0009g0079 a0002c0003t0001g0111 a0004c0009t0002g0108	24	318	0.0755	12	c.166 others(31): Show c.1664-3424_1664-3413dupGGGAGGGAGGGA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181716	T T	TTTCCTTC others(5): Show TTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00733.hp1 HG01169.hp1 others(8): Show HG00323.hp2 HG00733.hp1 HG01169.hp1 HG01169.hp2 HG01361.hp2 HG02135.hp1 HG02559.hp2 HG02735.hp1 HG03225.hp2 HG03486.hp2 NA18980.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0003t0001	a0001c0001t0001g0028 a0001c0001t0001g0055 a0001c0001t0001g0056 others(8): Show a0001c0001t0001g0028 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0100 a0001c0001t0001g0225 a0001c0001t0001g0234 a0001c0001t0001g0254 a0001c0001t0001g0267 a0001c0001t0002g0296 a0001c0001t0003g0029 a0002c0003t0001g0201	11	318	0.0346	12	c.166 others(31): Show c.1664-3531_1664-3520dupGGAAGGAAGGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181744	C C	CTTCTTTC others(5): Show CTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA19043.hp1 NA18948.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0206 a0001c0001t0002g0039 a0001c0001t0002g0206	2	318	0.0063	12	c.166 others(31): Show c.1664-3548_1664-3547insAGAAAGAAAGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181748	C C	CTTCTTTC others(5): Show CTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG01928.hp2 others(6): Show HG00438.hp1 HG00438.hp2 HG01928.hp2 HG01978.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 NA18952.hp1 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0023 a0001c0001t0001g0031 a0001c0001t0001g0134 others(6): Show a0001c0001t0001g0023 a0001c0001t0001g0031 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0186 a0001c0001t0001g0269 a0001c0001t0001g0279 a0001c0001t0002g0065 a0001c0001t0003g0047	9	318	0.0283	12	c.166 others(31): Show c.1664-3552_1664-3551insAGAAAGAAAGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181752	C C	CTTCCTTC others(5): Show CTTCCTTCCTTCT	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA19004.hp1 NA19065.hp2 others(1): Show NA18939.hp2 NA19004.hp1 NA19065.hp2 NA19086.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0003c0006t0001 a0001c0001t0001 a0001c0001t0002 a0003c0006t0001	a0001c0001t0001g0129 a0001c0001t0002g0082 a0001c0001t0002g0246 others(1): Show a0001c0001t0001g0129 a0001c0001t0002g0082 a0001c0001t0002g0246 a0003c0006t0001g0131	4	318	0.0126	12	c.166 others(31): Show c.1664-3556_1664-3555insAGAAGGAAGGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181752	C C	CTTCCTTC others(5): Show CTTCCTTCTTTCT	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0147 a0001c0001t0003g0147	1	318	0.0031	12	c.166 others(31): Show c.1664-3556_1664-3555insAGAAAGAAGGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46181752	C C	CTTCTTTC others(5): Show CTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01192.hp1 HG02074.hp2 others(7): Show HG00099.hp1 HG01192.hp1 HG02074.hp2 HG02129.hp2 HG02280.hp2 HG03654.hp2 NA18747.hp1 NA18971.hp1 NA18986.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0074 others(7): Show a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0074 a0001c0001t0001g0172 a0001c0001t0002g0148 a0001c0001t0002g0248 a0001c0001t0002g0251 a0001c0001t0002g0258 a0001c0001t0003g0159 a0001c0001t0004g0019	10	318	0.0315	12	c.166 others(31): Show c.1664-3567_1664-3556dupAGAAAGAAAGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46185084	T T	TCAAACAA others(5): Show TCAAACAAACAAA	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01069.hp2 HG01070.hp2 others(15): Show HG00733.hp2 HG01069.hp2 HG01070.hp2 HG01081.hp1 HG01261.hp1 HG01515.hp1 HG01517.hp1 HG02683.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp2 HG02965.hp2 HG03453.hp2 HG03490.hp1 HG03704.hp1 HG04115.hp1 NA19057.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003	a0001c0001t0001g0217 a0001c0001t0002g0109 a0001c0001t0002g0207 others(15): Show a0001c0001t0001g0217 a0001c0001t0002g0109 a0001c0001t0002g0207 a0001c0001t0002g0230 a0001c0001t0003g0167 a0001c0001t0003g0219 a0001c0002t0001g0132 a0001c0002t0001g0173 a0001c0002t0001g0240 a0001c0002t0001g0299 a0001c0002t0002g0077 a0001c0002t0002g0174 a0001c0002t0002g0175 a0001c0002t0002g0250 a0001c0002t0002g0275 a0001c0002t0003g0098 a0001c0002t0003g0156 a0001c0002t0003g0157	18	318	0.0566	12	c.166 others(31): Show c.1663+1492_1663+1503dupTTTGTTTGTTTG	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	10/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46190076	A A	AATTAGTA others(5): Show AATTAGTATCCAC	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0184	1	318	0.0031	12	c.142 others(31): Show c.1424-3130_1424-3129insGTGGATACTAAT	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	8/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46197295	G G	GATATATA others(5): Show GATATATATATAT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01358.hp1 HG01255.hp2 HG01358.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0260 a0001c0001t0002g0261	2	318	0.0063	12	c.142 others(31): Show c.1423+2116_1423+2127dupATATATATATAT	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	8/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46223666	C C	CTTCTTTC others(5): Show CTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01123.hp1 HG01169.hp1 others(14): Show HG00609.hp2 HG01123.hp1 HG01169.hp1 HG02129.hp1 HG02280.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02698.hp1 HG03927.hp1 NA18939.hp1 NA18980.hp2 NA18986.hp1 NA18990.hp2 NA19005.hp2 NA19080.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0004t0001	a0001c0001t0001g0007 a0001c0001t0001g0025 a0001c0001t0001g0061 others(14): Show a0001c0001t0001g0007 a0001c0001t0001g0025 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0100 a0001c0001t0001g0154 a0001c0001t0001g0225 a0001c0001t0001g0267 a0001c0001t0001g0283 a0001c0001t0002g0068 a0001c0001t0002g0080 a0001c0001t0003g0141 a0001c0001t0003g0190 a0001c0001t0006g0101 a0001c0004t0001g0273	17	318	0.0535	12	c.670 others(29): Show c.670+3830_670+3841dupAGAAAGAAAGAA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46223715	T T	TTCTTTCT others(5): Show TTCTTTCTTTTTC	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	318	0.0031	12	c.670 others(29): Show c.670+3792_670+3793insGAAAAAGAAAGA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46223817	T T	TCTTCCTT others(5): Show TCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG04199.hp1 HG00140.hp2 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0178 a0001c0001t0001g0290 a0001c0001t0001g0178 a0001c0001t0001g0290	2	318	0.0063	12	c.670 others(29): Show c.670+3679_670+3690dupGAAGGAAGGAAG	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46226231	C C	CCTTCTTC others(5): Show CCTTCTTCTTCCT	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0198 a0001c0001t0001g0198	1	318	0.0031	12	c.670 others(29): Show c.670+1276_670+1277insAGGAAGAAGAAG	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46226231	C C	CCTTCTTC others(5): Show CCTTCTTCTTCTT	intron_variant intron_variant	MODIFIER	HG02280.hp2 NA18970.hp2 NA18986.hp2 others(2): Show HG02280.hp2 NA18970.hp2 NA18986.hp2 NA19011.hp1 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0001c0001t0001 a0001c0001t0002 a0001c0004t0002	a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0002g0148 others(2): Show a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0002g0148 a0001c0001t0002g0264 a0001c0004t0002g0168	5	318	0.0157	12	c.670 others(29): Show c.670+1265_670+1276dupAAGAAGAAGAAG	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46226251	T T	TTCTTCTT others(5): Show TTCTTCTTCTTCC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0290 a0001c0001t0001g0290	1	318	0.0031	12	c.670 others(29): Show c.670+1256_670+1257insGGAAGAAGAAGA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	4/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46236649	A A	ATATCTAT others(5): Show ATATCTATCTATC	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0290 a0001c0001t0001g0290	1	318	0.0031	12	c.550 others(29): Show c.550+4302_550+4313dupGATAGATAGATA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	3/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46292916	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	NA18986.hp2 NA19004.hp2 NA18986.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0263 a0001c0001t0002g0264	2	318	0.0063	12	c.-40 others(33): Show c.-400+15327_-400+15338dupCACACACACACA	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding	1/11			chr20	TogoVar
CDH22_chr20_46168739_46313498	46311800	G G	GGGGTGTG others(5): Show GGGGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG03195.hp2 HG02630.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0005 a0001c0008t0007 a0001c0001t0005 a0001c0008t0007	a0001c0001t0005g0001 a0001c0008t0007g0002 a0001c0001t0005g0001 a0001c0008t0007g0002	2	318	0.0063	12	c.-39 others(23): Show c.-3946_-3945insACACACACACCC	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding		3303		chr20	TogoVar
CDH22_chr20_46168739_46313498	46311800	G G	GGTGTGTG others(5): Show GGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG00741.hp2 others(14): Show HG00140.hp2 HG00544.hp2 HG00741.hp2 HG01109.hp2 HG01169.hp1 HG01515.hp1 HG01517.hp1 HG02027.hp1 HG02027.hp2 HG02451.hp1 HG03041.hp2 HG03927.hp1 NA18951.hp2 NA18977.hp1 NA19065.hp1 NA19091.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0013 a0001c0001 a0001c0002 a0002c0013	a0001c0001t0001 a0001c0001t0002 a0001c0002t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0003 a0002c0013t0002	a0001c0001t0001g0025 a0001c0001t0001g0170 a0001c0001t0001g0198 others(14): Show a0001c0001t0001g0025 a0001c0001t0001g0170 a0001c0001t0001g0198 a0001c0001t0001g0214 a0001c0001t0001g0243 a0001c0001t0001g0267 a0001c0001t0001g0290 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0308 a0001c0001t0002g0302 a0001c0002t0003g0156 a0001c0002t0003g0157 a0001c0002t0003g0280 a0002c0013t0002g0301	17	318	0.0535	12	c.-39 others(23): Show c.-3946_-3945insACACACACACAC	CDH22	ENSG00000149654.11	transcript	ENST00000537909.4	protein_coding		3303		chr20	TogoVar
CDH23_chr10_71391920_71820947	71403314	T T	TCTTCCTT others(5): Show TCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02818.hp1 HG02895.hp2 others(3): Show HG02723.hp2 HG02818.hp1 HG02895.hp2 HG03041.hp1 HG03130.hp1 NA18906.hp1	a0002 a0031 a0070 others(3): Show a0002 a0031 a0070 a0082 a0094 a0103	a0002c0063 a0031c0058 a0070c0056 others(3): Show a0002c0063 a0031c0058 a0070c0056 a0082c0066 a0094c0088 a0103c0023	a0002c0063t0001 a0031c0058t0001 a0070c0056t0001 others(3): Show a0002c0063t0001 a0031c0058t0001 a0070c0056t0001 a0082c0066t0007 a0094c0088t0001 a0103c0023t0007	a0002c0063t0001g0151 a0031c0058t0001g0153 a0070c0056t0001g0179 others(3): Show a0002c0063t0001g0151 a0031c0058t0001g0153 a0070c0056t0001g0179 a0082c0066t0007g0177 a0094c0088t0001g0159 a0103c0023t0007g0174	6	196	0.0306	12	c.-6+ others(27): Show c.-6+6000_-6+6011dupCCTTCCTTCCTT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71403326	C C	CCTTCCTT others(5): Show CCTTCCTTCCTTT	intron_variant intron_variant	MODIFIER	HG04204.hp2 NA18981.hp1 HG04204.hp2 NA18981.hp1	a0060 a0066 a0060 a0066	a0060c0031 a0066c0034 a0060c0031 a0066c0034	a0060c0031t0007 a0066c0034t0001 a0060c0031t0007 a0066c0034t0001	a0060c0031t0007g0139 a0066c0034t0001g0158 a0060c0031t0007g0139 a0066c0034t0001g0158	2	196	0.0102	12	c.-6+ others(27): Show c.-6+6011_-6+6012insCCTTCCTTTCTT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71403326	C C	CCTTTCTT others(5): Show CCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0015 a0015	a0015c0055 a0015c0055	a0015c0055t0006 a0015c0055t0006	a0015c0055t0006g0043 a0015c0055t0006g0043	1	196	0.0051	12	c.-6+ others(27): Show c.-6+6079_-6+6090dupTTCTTTCTTTCT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71403454	T T	TTCCTTTC others(5): Show TTCCTTTCCTTCC	intron_variant intron_variant	MODIFIER	HG00597.hp1 NA18945.hp2 HG00597.hp1 NA18945.hp2	a0020 a0032 a0020 a0032	a0020c0136 a0032c0061 a0020c0136 a0032c0061	a0020c0136t0001 a0032c0061t0001 a0020c0136t0001 a0032c0061t0001	a0020c0136t0001g0113 a0032c0061t0001g0108 a0020c0136t0001g0113 a0032c0061t0001g0108	2	196	0.0102	12	c.-6+ others(27): Show c.-6+6137_-6+6138insCCTTTCCTTCCT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71414047	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG03579.hp1 HG01069.hp1 HG03579.hp1	a0034 a0083 a0034 a0083	a0034c0097 a0083c0065 a0034c0097 a0083c0065	a0034c0097t0007 a0083c0065t0033 a0034c0097t0007 a0083c0065t0033	a0034c0097t0007g0186 a0083c0065t0033g0038 a0034c0097t0007g0186 a0083c0065t0033g0038	2	196	0.0102	12	c.-6+ others(29): Show c.-6+16755_-6+16766dupGTGTGTGTGTGT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71425219	C C	CAGAGAGA others(5): Show CAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0049 a0049	a0049c0163 a0049c0163	a0049c0163t0018 a0049c0163t0018	a0049c0163t0018g0011 a0049c0163t0018g0011	1	196	0.0051	12	c.-5- others(29): Show c.-5-14607_-5-14596dupAGAGAGAGAGAG	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71425371	A A	AGAAGGAA others(5): Show AGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00738.hp1 HG01257.hp1 others(10): Show HG00621.hp2 HG00738.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG02132.hp2 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG03516.hp1 HG03579.hp1 NA19002.hp1 NA19005.hp2	a0002 a0006 a0009 others(8): Show a0002 a0006 a0009 a0011 a0025 a0027 a0034 a0056 a0068 a0076 a0089	a0002c0079 a0002c0087 a0006c0044 others(9): Show a0002c0079 a0002c0087 a0006c0044 a0009c0013 a0011c0033 a0025c0117 a0027c0010 a0034c0097 a0056c0150 a0068c0052 a0076c0039 a0089c0099	a0002c0079t0011 a0002c0087t0004 a0006c0044t0003 others(9): Show a0002c0079t0011 a0002c0087t0004 a0006c0044t0003 a0009c0013t0004 a0011c0033t0014 a0025c0117t0001 a0027c0010t0005 a0034c0097t0007 a0056c0150t0001 a0068c0052t0021 a0076c0039t0004 a0089c0099t0001	a0002c0079t0011g0032 a0002c0087t0004g0055 a0006c0044t0003g0079 others(10): Show a0002c0079t0011g0032 a0002c0087t0004g0055 a0006c0044t0003g0079 a0009c0013t0004g0059 a0011c0033t0014g0094 a0025c0117t0001g0164 a0027c0010t0005g0116 a0027c0010t0005g0117 a0034c0097t0007g0186 a0056c0150t0001g0175 a0068c0052t0021g0041 a0076c0039t0004g0084 a0089c0099t0001g0138	13	196	0.0663	12	c.-5- others(29): Show c.-5-14425_-5-14414dupAGGAAGGAAGGA	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71427195	G G	GAGAAAGA others(5): Show GAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01123.hp2 HG01167.hp1 others(26): Show HG00621.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp1 HG01496.hp2 HG01517.hp1 HG01891.hp2 HG02056.hp2 HG02074.hp2 HG02132.hp1 HG02602.hp1 HG02738.hp1 HG02818.hp2 HG03579.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 NA18612.hp1 NA18945.hp1 NA18977.hp1 NA18979.hp2 NA18994.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0004 others(18): Show a0001 a0002 a0004 a0005 a0007 a0008 a0010 a0023 a0029 a0030 a0032 a0034 a0037 a0038 a0039 a0045 a0051 a0077 a0086 a0096 a0101	a0001c0001 a0001c0073 a0002c0011 others(24): Show a0001c0001 a0001c0073 a0002c0011 a0002c0122 a0004c0035 a0004c0111 a0005c0105 a0007c0005 a0008c0084 a0008c0123 a0010c0019 a0023c0008 a0029c0119 a0030c0038 a0030c0054 a0032c0120 a0034c0074 a0034c0097 a0037c0138 a0038c0137 a0039c0144 a0045c0149 a0051c0147 a0077c0113 a0086c0083 a0096c0077 a0101c0124	a0001c0001t0032 a0001c0073t0004 a0002c0011t0004 others(24): Show a0001c0001t0032 a0001c0073t0004 a0002c0011t0004 a0002c0122t0003 a0004c0035t0006 a0004c0111t0006 a0005c0105t0002 a0007c0005t0001 a0008c0084t0002 a0008c0123t0017 a0010c0019t0009 a0023c0008t0003 a0029c0119t0010 a0030c0038t0006 a0030c0054t0005 a0032c0120t0002 a0034c0074t0004 a0034c0097t0007 a0037c0138t0009 a0038c0137t0025 a0039c0144t0001 a0045c0149t0008 a0051c0147t0009 a0077c0113t0024 a0086c0083t0016 a0096c0077t0002 a0101c0124t0006	a0001c0001t0032g0037 a0001c0073t0004g0056 a0002c0011t0004g0086 others(26): Show a0001c0001t0032g0037 a0001c0073t0004g0056 a0002c0011t0004g0086 a0002c0122t0003g0099 a0004c0035t0006g0053 a0004c0111t0006g0088 a0005c0105t0002g0074 a0007c0005t0001g0128 a0007c0005t0001g0129 a0008c0084t0002g0067 a0008c0123t0017g0111 a0010c0019t0009g0026 a0023c0008t0003g0133 a0023c0008t0003g0136 a0029c0119t0010g0007 a0030c0038t0006g0052 a0030c0054t0005g0118 a0032c0120t0002g0076 a0034c0074t0004g0060 a0034c0097t0007g0186 a0037c0138t0009g0024 a0038c0137t0025g0064 a0039c0144t0001g0181 a0045c0149t0008g0005 a0051c0147t0009g0022 a0077c0113t0024g0078 a0086c0083t0016g0147 a0096c0077t0002g0049 a0101c0124t0006g0054	29	196	0.1480	12	c.-5- others(29): Show c.-5-12593_-5-12582dupAAAGAAAGAAAG	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	1/69		INFO_REALIGN_3_PRIME	chr10	TogoVar
CDH23_chr10_71391920_71820947	71500804	C C	CTTTTCTT others(5): Show CTTTTCTTTTCTT	intron_variant intron_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0015 a0015	a0015c0043 a0015c0043	a0015c0043t0006 a0015c0043t0006	a0015c0043t0006g0095 a0015c0043t0006g0095	1	196	0.0051	12	c.146 others(29): Show c.146-9275_146-9264dupTTCTTTTCTTTT	CDH23	ENSG00000107736.22	transcript	ENST00000224721.12	protein_coding	3/69		INFO_REALIGN_3_PRIME	chr10	TogoVar

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