Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AFAP1_chr4_7753714_7944861	7848099	A A	AGAAGGAA others(5): Show AGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00735.hp1 HG01167.hp1 others(10): Show HG00140.hp1 HG00735.hp1 HG01167.hp1 HG01943.hp2 HG02257.hp2 HG03453.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp2 HG03927.hp1 NA18522.hp1 NA19010.hp1 NA19063.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0001c0004 a0001c0007 others(3): Show a0001c0002 a0001c0004 a0001c0007 a0001c0017 a0001c0030 a0006c0046	a0001c0002t0003 a0001c0002t0005 a0001c0002t0032 others(7): Show a0001c0002t0003 a0001c0002t0005 a0001c0002t0032 a0001c0002t0049 a0001c0004t0011 a0001c0007t0006 a0001c0007t0021 a0001c0017t0017 a0001c0030t0038 a0006c0046t0012	a0001c0002t0003g0110 a0001c0002t0003g0127 a0001c0002t0003g0130 others(10): Show a0001c0002t0003g0110 a0001c0002t0003g0127 a0001c0002t0003g0130 a0001c0002t0005g0111 a0001c0002t0032g0252 a0001c0002t0049g0290 a0001c0004t0011g0253 a0001c0007t0006g0131 a0001c0007t0006g0263 a0001c0007t0021g0262 a0001c0017t0017g0221 a0001c0030t0038g0259 a0006c0046t0012g0001	13	318	0.0409	12	c.335 others(29): Show c.335-4761_335-4750dupCTTCCTTCCTTC	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	4/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7898808	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp2 others(74): Show HG00099.hp1 HG00140.hp2 HG00323.hp2 HG00423.hp2 HG00558.hp1 HG00609.hp1 HG00735.hp2 HG01070.hp2 HG01167.hp1 HG01168.hp1 HG01192.hp2 HG01256.hp1 HG01261.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp2 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02148.hp1 HG02155.hp1 HG02293.hp2 HG02451.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02809.hp1 HG02818.hp1 HG03098.hp2 HG03139.hp2 HG03540.hp2 HG03654.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03834.hp1 HG04115.hp2 HG04204.hp2 NA18522.hp1 NA18945.hp1 NA18947.hp1 NA18950.hp2 NA18954.hp2 NA18956.hp2 NA18964.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18971.hp1 NA18977.hp1 NA18980.hp1 NA18982.hp2 NA19003.hp1 NA19005.hp2 NA19009.hp2 NA19010.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19068.hp2 NA19079.hp2 NA20129.hp2 NA20905.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0007	a0001c0001 a0001c0002 a0001c0003 others(18): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0010 a0001c0011 a0001c0015 a0001c0016 a0001c0017 a0001c0023 a0001c0024 a0001c0025 a0001c0031 a0001c0032 a0001c0036 a0001c0038 a0001c0043 a0002c0008 a0003c0006 a0007c0029	a0001c0001t0001 a0001c0001t0010 a0001c0001t0014 others(31): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0014 a0001c0001t0027 a0001c0001t0043 a0001c0001t0045 a0001c0002t0049 a0001c0002t0050 a0001c0003t0002 a0001c0004t0006 a0001c0004t0062 a0001c0004t0066 a0001c0004t0068 a0001c0007t0006 a0001c0007t0021 a0001c0007t0036 a0001c0010t0001 a0001c0011t0016 a0001c0015t0037 a0001c0016t0002 a0001c0017t0017 a0001c0023t0001 a0001c0024t0002 a0001c0025t0001 a0001c0031t0071 a0001c0032t0009 a0001c0036t0060 a0001c0038t0002 a0001c0043t0057 a0002c0008t0004 a0002c0008t0031 a0003c0006t0005 a0003c0006t0019 a0007c0029t0002	a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0038 others(74): Show a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0073 a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0168 a0001c0001t0001g0193 a0001c0001t0010g0061 a0001c0001t0010g0062 a0001c0001t0010g0077 a0001c0001t0014g0049 a0001c0001t0014g0056 a0001c0001t0027g0071 a0001c0001t0027g0072 a0001c0001t0043g0070 a0001c0001t0045g0030 a0001c0002t0049g0290 a0001c0002t0050g0226 a0001c0003t0002g0287 a0001c0004t0006g0063 a0001c0004t0006g0075 a0001c0004t0006g0076 a0001c0004t0006g0211 a0001c0004t0006g0240 a0001c0004t0006g0248 a0001c0004t0006g0296 a0001c0004t0006g0299 a0001c0004t0062g0241 a0001c0004t0066g0243 a0001c0004t0068g0242 a0001c0007t0006g0228 a0001c0007t0006g0263 a0001c0007t0021g0254 a0001c0007t0021g0255 a0001c0007t0021g0262 a0001c0007t0036g0005 a0001c0010t0001g0039 a0001c0011t0016g0042 a0001c0011t0016g0043 a0001c0015t0037g0050 a0001c0016t0002g0031 a0001c0017t0017g0221 a0001c0023t0001g0132 a0001c0024t0002g0140 a0001c0025t0001g0141 a0001c0031t0071g0313 a0001c0032t0009g0267 a0001c0036t0060g0136 a0001c0038t0002g0212 a0001c0043t0057g0286 a0002c0008t0004g0146 a0002c0008t0004g0149 a0002c0008t0004g0151 a0002c0008t0031g0288 a0002c0008t0031g0289 a0003c0006t0005g0078 a0003c0006t0005g0095 a0003c0006t0005g0096 a0003c0006t0005g0097 a0003c0006t0005g0137 a0003c0006t0005g0143 a0003c0006t0005g0145 a0003c0006t0019g0264 a0007c0029t0002g0032	77	318	0.2421	12	c.-2- others(29): Show c.-2-26740_-2-26729dupACACACACACAC	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding	1/17			chr4	TogoVar
AFAP1_chr4_7753714_7944861	7943943	T T	TTTTATTT others(5): Show TTTTATTTATTTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp1 HG02895.hp2 HG02897.hp2 HG01192.hp1 HG02895.hp2 HG02897.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0006 a0001c0002 a0003c0006	a0001c0002t0013 a0003c0006t0019 a0001c0002t0013 a0003c0006t0019	a0001c0002t0013g0310 a0001c0002t0013g0311 a0003c0006t0019g0134 a0001c0002t0013g0310 a0001c0002t0013g0311 a0003c0006t0019g0134	3	318	0.0094	12	c.-42 others(23): Show c.-4291_-4290insTAAATAAATAAA	AFAP1	ENSG00000196526.11	transcript	ENST00000420658.6	protein_coding		4083		chr4	TogoVar
AFDN_chr6_167821911_167977023	167821960	T T	TACACACA others(5): Show TACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00558.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0031 a0001c0002t0001g0031	1	326	0.0031	12	c.-51 others(23): Show c.-5173_-5172insACACACACACAC	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding		4950		chr6	TogoVar
AFDN_chr6_167821911_167977023	167891404	G G	GGTGTGTG others(5): Show GGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01123.hp1 HG01258.hp1 others(2): Show HG00438.hp1 HG01123.hp1 HG01258.hp1 HG02735.hp1 NA19004.hp1	a0001 a0001	a0001c0003 a0001c0005 a0001c0024 others(1): Show a0001c0003 a0001c0005 a0001c0024 a0001c0032	a0001c0003t0001 a0001c0005t0001 a0001c0024t0001 others(1): Show a0001c0003t0001 a0001c0005t0001 a0001c0024t0001 a0001c0032t0001	a0001c0003t0001g0023 a0001c0003t0001g0028 a0001c0005t0001g0056 others(2): Show a0001c0003t0001g0023 a0001c0003t0001g0028 a0001c0005t0001g0056 a0001c0024t0001g0124 a0001c0032t0001g0038	5	326	0.0153	12	c.117 others(29): Show c.1177+378_1177+379insTGTGTGTGTGTG	AFDN	ENSG00000130396.22	transcript	ENST00000683244.1	protein_coding	8/33		INFO_REALIGN_3_PRIME	chr6	TogoVar
AFF1_chr4_86930011_87146039	86963963	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03704.hp1 HG03486.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0005 a0001c0001t0002 a0001c0002t0005	a0001c0001t0002g0205 a0001c0002t0005g0118 a0001c0001t0002g0205 a0001c0002t0005g0118	2	294	0.0068	12	c.38+ others(29): Show c.38+15402_38+15413dupTTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86969879	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00741.hp1 HG01069.hp1 others(9): Show HG00323.hp1 HG00741.hp1 HG01069.hp1 HG01099.hp2 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01496.hp2 HG01981.hp1 HG03669.hp2 HG03834.hp1 HG03942.hp2	a0001 a0015 a0001 a0015	a0001c0001 a0001c0010 a0015c0022 a0001c0001 a0001c0010 a0015c0022	a0001c0001t0006 a0001c0001t0007 a0001c0001t0024 others(4): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0024 a0001c0001t0058 a0001c0010t0006 a0001c0010t0054 a0015c0022t0006	a0001c0001t0006g0073 a0001c0001t0006g0074 a0001c0001t0006g0076 others(9): Show a0001c0001t0006g0073 a0001c0001t0006g0074 a0001c0001t0006g0076 a0001c0001t0006g0086 a0001c0001t0006g0106 a0001c0001t0007g0081 a0001c0001t0024g0080 a0001c0001t0024g0085 a0001c0001t0058g0082 a0001c0010t0006g0083 a0001c0010t0054g0084 a0015c0022t0006g0087	12	294	0.0408	12	c.38+ others(29): Show c.38+21315_38+21326dupAAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86973787	T T	TTTTTCCT others(5): Show TTTTTCCTTTCCC	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0018 a0018	a0018c0013 a0018c0013	a0018c0013t0070 a0018c0013t0070	a0018c0013t0070g0010 a0018c0013t0070g0010	1	294	0.0034	12	c.38+ others(29): Show c.38+25237_38+25248dupTCCCTTTTCCTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86978177	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02886.hp2 HG06807.hp2 HG02280.hp1 HG02886.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0014 a0001c0002 a0001c0003 a0001c0014	a0001c0002t0005 a0001c0003t0001 a0001c0014t0005 a0001c0002t0005 a0001c0003t0001 a0001c0014t0005	a0001c0002t0005g0116 a0001c0003t0001g0179 a0001c0014t0005g0181 a0001c0002t0005g0116 a0001c0003t0001g0179 a0001c0014t0005g0181	3	294	0.0102	12	c.38+ others(29): Show c.38+29619_38+29630dupTTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86982848	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02486.hp2 HG02886.hp2 others(1): Show HG02257.hp1 HG02486.hp2 HG02886.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 others(1): Show a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0002t0005	a0001c0001t0011g0267 a0001c0001t0016g0098 a0001c0001t0017g0095 others(1): Show a0001c0001t0011g0267 a0001c0001t0016g0098 a0001c0001t0017g0095 a0001c0002t0005g0116	4	294	0.0136	12	c.38+ others(29): Show c.38+34293_38+34304dupAAAAAAAAAAAA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	86985180	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0248 a0001c0001t0002g0248	1	294	0.0034	12	c.38+ others(29): Show c.38+36609_38+36610insATATATATATAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20			chr4	TogoVar
AFF1_chr4_86930011_87146039	86985181	C C	CTATATAT others(5): Show CTATATATATATA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02280.hp1 HG02451.hp2 others(6): Show HG02145.hp1 HG02280.hp1 HG02451.hp2 HG02922.hp1 HG02970.hp2 HG03669.hp1 NA19001.hp2 NA21309.hp1 NA21309.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0014 a0001c0016 a0010c0015	a0001c0001t0001 a0001c0001t0050 a0001c0002t0005 others(6): Show a0001c0001t0001 a0001c0001t0050 a0001c0002t0005 a0001c0003t0007 a0001c0003t0027 a0001c0004t0022 a0001c0014t0005 a0001c0016t0069 a0010c0015t0055	a0001c0001t0001g0292 a0001c0001t0050g0241 a0001c0002t0005g0196 others(6): Show a0001c0001t0001g0292 a0001c0001t0050g0241 a0001c0002t0005g0196 a0001c0003t0007g0206 a0001c0003t0027g0186 a0001c0004t0022g0251 a0001c0014t0005g0181 a0001c0016t0069g0088 a0010c0015t0055g0012	9	294	0.0306	12	c.38+ others(29): Show c.38+36633_38+36644dupTATATATATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000603	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0077 a0001c0001t0001g0077	1	294	0.0034	12	c.39- others(29): Show c.39-45562_39-45561insGTGTGTGTGTGT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87000605	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01123.hp1 HG01192.hp1 others(15): Show HG00140.hp2 HG01123.hp1 HG01192.hp1 HG02109.hp1 HG02145.hp2 HG02273.hp1 HG02738.hp1 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03486.hp2 HG03579.hp2 HG03669.hp1 HG03942.hp1 HG04184.hp1 NA18998.hp2 NA19043.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0001c0011	a0001c0001t0003 a0001c0001t0004 a0001c0002t0005 others(6): Show a0001c0001t0003 a0001c0001t0004 a0001c0002t0005 a0001c0003t0007 a0001c0003t0027 a0001c0003t0062 a0001c0003t0066 a0001c0007t0008 a0001c0011t0008	a0001c0001t0003g0239 a0001c0001t0004g0123 a0001c0001t0004g0202 others(15): Show a0001c0001t0003g0239 a0001c0001t0004g0123 a0001c0001t0004g0202 a0001c0001t0004g0204 a0001c0001t0004g0213 a0001c0001t0004g0215 a0001c0001t0004g0220 a0001c0001t0004g0228 a0001c0002t0005g0118 a0001c0003t0007g0206 a0001c0003t0007g0235 a0001c0003t0027g0186 a0001c0003t0062g0182 a0001c0003t0066g0207 a0001c0007t0008g0210 a0001c0007t0008g0211 a0001c0007t0008g0237 a0001c0011t0008g0261	18	294	0.0612	12	c.39- others(29): Show c.39-45536_39-45525dupTGTGTGTGTGTG	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87013032	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0066 a0001c0003t0066	a0001c0003t0066g0207 a0001c0003t0066g0207	1	294	0.0034	12	c.39- others(29): Show c.39-33119_39-33108dupTTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022549	T T	TATATATA others(5): Show TATATATATACAC	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02145.hp1 HG02922.hp1 others(1): Show HG01175.hp2 HG02145.hp1 HG02922.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0001t0050 a0001c0004t0022 a0001c0001t0002 a0001c0001t0050 a0001c0004t0022	a0001c0001t0002g0191 a0001c0001t0050g0241 a0001c0004t0022g0243 others(1): Show a0001c0001t0002g0191 a0001c0001t0050g0241 a0001c0004t0022g0243 a0001c0004t0022g0251	4	294	0.0136	12	c.39- others(29): Show c.39-23608_39-23607insCACATATATATA	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022592	A A	ATATATAT others(5): Show ATATATATATATC	intron_variant intron_variant	MODIFIER	HG02083.hp2 homoSapiens_chm13v2.hp1 HG02083.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0031 a0001c0001t0001 a0001c0001t0031	a0001c0001t0001g0152 a0001c0001t0031g0131 a0001c0001t0001g0152 a0001c0001t0031g0131	2	294	0.0068	12	c.39- others(29): Show c.39-23573_39-23572insATATATATATCT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87022664	G G	GTATATAT others(5): Show GTATATATATAGC	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0248 a0001c0001t0002g0248	1	294	0.0034	12	c.39- others(29): Show c.39-23501_39-23500insATATATATAGCT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87063228	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00558.hp1 HG00673.hp2 others(26): Show HG00280.hp2 HG00558.hp1 HG00673.hp2 HG00741.hp1 HG01071.hp2 HG01168.hp1 HG01169.hp2 HG01516.hp1 HG01517.hp1 HG01993.hp2 HG02015.hp1 HG02129.hp1 HG02135.hp1 HG02523.hp1 HG03669.hp1 HG03942.hp2 NA18747.hp2 NA18951.hp2 NA18981.hp1 NA18985.hp1 NA19001.hp2 NA19009.hp2 NA19011.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19060.hp2 NA19070.hp1 NA19083.hp2	a0001 a0006 a0009 a0001 a0006 a0009	a0001c0001 a0001c0003 a0001c0010 others(2): Show a0001c0001 a0001c0003 a0001c0010 a0006c0031 a0009c0024	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0014 a0001c0001t0059 a0001c0003t0007 a0001c0010t0054 a0006c0031t0010 a0009c0024t0001	a0001c0001t0001g0034 a0001c0001t0001g0120 a0001c0001t0001g0125 others(26): Show a0001c0001t0001g0034 a0001c0001t0001g0120 a0001c0001t0001g0125 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0146 a0001c0001t0001g0149 a0001c0001t0001g0161 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0292 a0001c0001t0002g0160 a0001c0001t0006g0086 a0001c0001t0007g0145 a0001c0001t0012g0127 a0001c0001t0012g0128 a0001c0001t0014g0136 a0001c0001t0059g0130 a0001c0003t0007g0206 a0001c0010t0054g0084 a0006c0031t0010g0162 a0009c0024t0001g0150	29	294	0.0986	12	c.105 others(33): Show c.1059+15651_1059+15662dupTTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87111000	T T	TTATTTTA others(5): Show TTATTTTATTTTA	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0005 a0001c0017t0005	a0001c0017t0005g0097 a0001c0017t0005g0097	1	294	0.0034	12	c.153 others(31): Show c.1533+2686_1533+2687insATTTTATTTTAT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87111012	A A	ATTTTATT others(5): Show ATTTTATTTTATT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp2 HG02258.hp1 others(13): Show HG01109.hp2 HG01891.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp2 HG02572.hp1 HG02630.hp2 HG02723.hp2 HG02886.hp2 HG02922.hp2 HG03041.hp2 HG03195.hp1 HG03486.hp2 HG03579.hp1 NA18522.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0014 a0001c0030	a0001c0001t0051 a0001c0002t0005 a0001c0002t0049 others(4): Show a0001c0001t0051 a0001c0002t0005 a0001c0002t0049 a0001c0002t0056 a0001c0005t0052 a0001c0014t0005 a0001c0030t0005	a0001c0001t0051g0109 a0001c0002t0005g0116 a0001c0002t0005g0117 others(13): Show a0001c0001t0051g0109 a0001c0002t0005g0116 a0001c0002t0005g0117 a0001c0002t0005g0118 a0001c0002t0005g0185 a0001c0002t0005g0193 a0001c0002t0005g0196 a0001c0002t0005g0197 a0001c0002t0005g0198 a0001c0002t0005g0199 a0001c0002t0005g0249 a0001c0002t0049g0258 a0001c0002t0056g0200 a0001c0005t0052g0172 a0001c0014t0005g0181 a0001c0030t0005g0275	16	294	0.0544	12	c.153 others(31): Show c.1533+2701_1533+2702insATTTTATTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	11/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF1_chr4_86930011_87146039	87115609	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02055.hp1 HG02647.hp1 others(5): Show HG00639.hp2 HG02055.hp1 HG02647.hp1 HG02809.hp1 HG02976.hp1 HG03130.hp1 HG03225.hp2 NA19240.hp2	a0001 a0018 a0001 a0018	a0001c0001 a0001c0006 a0001c0007 others(2): Show a0001c0001 a0001c0006 a0001c0007 a0001c0011 a0018c0013	a0001c0001t0015 a0001c0001t0016 a0001c0001t0057 others(4): Show a0001c0001t0015 a0001c0001t0016 a0001c0001t0057 a0001c0006t0008 a0001c0007t0008 a0001c0011t0008 a0018c0013t0070	a0001c0001t0015g0259 a0001c0001t0016g0099 a0001c0001t0057g0102 others(5): Show a0001c0001t0015g0259 a0001c0001t0016g0099 a0001c0001t0057g0102 a0001c0006t0008g0184 a0001c0007t0008g0210 a0001c0007t0008g0211 a0001c0011t0008g0110 a0018c0013t0070g0010	8	294	0.0272	12	c.246 others(29): Show c.2466+315_2466+326dupTTTTTTTTTTTT	AFF1	ENSG00000172493.23	transcript	ENST00000395146.9	protein_coding	12/20		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFF2_chrX_148495617_149005663	148500637	T T	TGCCGCCG others(5): Show TGCCGCCGCCGCC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01074.hp1 HG02074.hp1 HG02698.hp1 others(8): Show HG01074.hp1 HG02074.hp1 HG02698.hp1 HG03490.hp1 HG03942.hp1 NA18965.hp1 NA18982.hp1 NA18986.hp1 NA18990.hp1 NA19000.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0057 a0001c0001t0058 others(5): Show a0001c0001t0004 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063	a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0045 others(8): Show a0001c0001t0004g0041 a0001c0001t0004g0043 a0001c0001t0004g0045 a0001c0001t0004g0100 a0001c0001t0057g0135 a0001c0001t0058g0097 a0001c0001t0059g0014 a0001c0001t0060g0067 a0001c0001t0061g0098 a0001c0001t0062g0087 a0001c0001t0063g0053	11	169	0.0651	12	c.-42 others(21): Show c.-425_-414dupCGCCGCCGCCGC	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/21	413	INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614738	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0112 a0001c0001t0011g0112	1	169	0.0059	12	c.48- others(29): Show c.48-37218_48-37207dupTCTTTCTTTCTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148614796	T T	TTCTTCCT others(5): Show TTCTTCCTTTCTC	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0102 a0001c0002t0102	a0001c0002t0102g0094 a0001c0002t0102g0094	1	169	0.0059	12	c.48- others(29): Show c.48-37200_48-37199insTCCTTTCTCTCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	1/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148700419	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0112 a0001c0001t0011g0112	1	169	0.0059	12	c.104 others(33): Show c.1041+37683_1041+37694dupTGTGTGTGTGTG	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148701011	A A	AGAATGTG others(5): Show AGAATGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0128 a0001c0001t0011g0128	1	169	0.0059	12	c.104 others(33): Show c.1041+38243_1041+38244insGAATGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148701011	A A	AGAGAGAG others(5): Show AGAGAGAGAATGT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0092 a0001c0001t0092	a0001c0001t0092g0008 a0001c0001t0092g0008	1	169	0.0059	12	c.104 others(33): Show c.1041+38243_1041+38244insGAGAGAGAATGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20			chrX	TogoVar
AFF2_chrX_148495617_149005663	148701012	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0119 a0001c0001t0119	a0001c0001t0119g0061 a0001c0001t0119g0061	1	169	0.0059	12	c.104 others(33): Show c.1041+38274_1041+38285dupGTGTGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148749947	C C	CTTTATTT others(5): Show CTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00642.hp1 others(9): Show HG00140.hp1 HG00280.hp1 HG00642.hp1 HG01069.hp1 HG01515.hp1 HG01884.hp2 HG02809.hp1 HG02818.hp2 HG03471.hp1 HG03486.hp2 HG06807.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0006 a0001c0001t0025 a0001c0001t0035 others(8): Show a0001c0001t0006 a0001c0001t0025 a0001c0001t0035 a0001c0001t0037 a0001c0001t0084 a0001c0001t0099 a0001c0001t0100 a0001c0002t0022 a0001c0002t0031 a0001c0002t0105 a0001c0005t0023	a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0025g0081 others(9): Show a0001c0001t0006g0144 a0001c0001t0006g0163 a0001c0001t0025g0081 a0001c0001t0035g0078 a0001c0001t0037g0037 a0001c0001t0084g0030 a0001c0001t0099g0141 a0001c0001t0100g0140 a0001c0002t0022g0003 a0001c0002t0031g0148 a0001c0002t0105g0117 a0001c0005t0023g0125	12	169	0.0710	12	c.104 others(33): Show c.1042-59905_1042-59894dupATTTATTTATTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148762409	G G	GTATATAT others(5): Show GTATATATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01515.hp1 HG03471.hp1 others(2): Show HG01069.hp1 HG01515.hp1 HG03471.hp1 HG03486.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0025 a0001c0001t0077 others(2): Show a0001c0001t0006 a0001c0001t0025 a0001c0001t0077 a0001c0001t0099 a0001c0002t0105	a0001c0001t0006g0163 a0001c0001t0025g0081 a0001c0001t0077g0095 others(2): Show a0001c0001t0006g0163 a0001c0001t0025g0081 a0001c0001t0077g0095 a0001c0001t0099g0141 a0001c0002t0105g0117	5	169	0.0296	12	c.104 others(33): Show c.1042-47466_1042-47455dupTATATATATATA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148762480	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0054 a0001c0002t0054	a0001c0002t0054g0133 a0001c0002t0054g0133	1	169	0.0059	12	c.104 others(33): Show c.1042-47378_1042-47367dupGTGTGTGTGTGT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148762508	G G	GTGTGTGT others(5): Show GTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0101 a0001c0001t0039g0101	1	169	0.0059	12	c.104 others(33): Show c.1042-47367_1042-47366insGTGTGTGTGTAT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148773685	G G	GGAAAGAA others(5): Show GGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG01433.hp1 HG01928.hp1 others(23): Show HG01258.hp1 HG01433.hp1 HG01928.hp1 HG01943.hp1 HG01978.hp2 HG02040.hp1 HG02056.hp1 HG02129.hp1 HG02132.hp1 HG02486.hp1 HG02630.hp1 HG02818.hp1 HG03139.hp1 HG04204.hp1 NA18940.hp1 NA18953.hp1 NA18983.hp1 NA18990.hp1 NA18994.hp1 NA19056.hp1 NA19068.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0021 a0001c0001t0024 a0001c0001t0027 a0001c0001t0043 a0001c0001t0048 a0001c0001t0049 a0001c0001t0051 a0001c0001t0063 a0001c0001t0090 a0001c0001t0093 a0001c0001t0104 a0001c0001t0116 a0001c0001t0119 a0001c0001t0122 a0001c0002t0009 a0001c0002t0034 a0001c0004t0113	a0001c0001t0001g0070 a0001c0001t0002g0020 a0001c0001t0002g0054 others(23): Show a0001c0001t0001g0070 a0001c0001t0002g0020 a0001c0001t0002g0054 a0001c0001t0007g0038 a0001c0001t0008g0051 a0001c0001t0008g0059 a0001c0001t0012g0168 a0001c0001t0013g0072 a0001c0001t0015g0032 a0001c0001t0021g0150 a0001c0001t0024g0091 a0001c0001t0027g0017 a0001c0001t0043g0006 a0001c0001t0048g0013 a0001c0001t0049g0105 a0001c0001t0051g0069 a0001c0001t0063g0053 a0001c0001t0090g0099 a0001c0001t0093g0007 a0001c0001t0104g0049 a0001c0001t0116g0075 a0001c0001t0119g0061 a0001c0001t0122g0092 a0001c0002t0009g0126 a0001c0002t0034g0077 a0001c0004t0113g0159	26	169	0.1539	12	c.104 others(33): Show c.1042-36140_1042-36129dupAAGAAAGAAAGA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148773685	G G	GGAAGGAA others(5): Show GGAAGGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0026 a0001c0003t0026	a0001c0003t0026g0157 a0001c0003t0026g0157	1	169	0.0059	12	c.104 others(33): Show c.1042-36188_1042-36187insGGAAAGAAAGAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	3/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148824060	C C	CCTCTCTC others(5): Show CCTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02818.hp1 HG01884.hp2 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0031 a0001c0002t0009 a0001c0002t0031	a0001c0002t0009g0126 a0001c0002t0031g0148 a0001c0002t0009g0126 a0001c0002t0031g0148	2	169	0.0118	12	c.108 others(33): Show c.1087-13574_1087-13563dupCTCTCTCTCTCT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	4/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148983953	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02630.hp2 HG03041.hp2 others(8): Show HG02280.hp1 HG02630.hp2 HG03041.hp2 HG03130.hp1 HG03209.hp1 NA18747.hp1 NA18944.hp1 NA18959.hp1 NA18983.hp1 NA19043.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0017 a0001c0001t0069 a0001c0001t0121 others(8): Show a0001c0001t0017 a0001c0001t0069 a0001c0001t0121 a0001c0001t0122 a0001c0002t0022 a0001c0002t0029 a0001c0002t0047 a0001c0002t0054 a0001c0002t0072 a0001c0002t0108 a0001c0002t0111	a0001c0001t0017g0040 a0001c0001t0069g0047 a0001c0001t0121g0046 others(8): Show a0001c0001t0017g0040 a0001c0001t0069g0047 a0001c0001t0121g0046 a0001c0001t0122g0092 a0001c0002t0022g0003 a0001c0002t0029g0149 a0001c0002t0047g0108 a0001c0002t0054g0133 a0001c0002t0072g0018 a0001c0002t0108g0002 a0001c0002t0111g0096	11	169	0.0651	12	c.362 others(31): Show c.3623+3167_3623+3178dupAAAAAAAAAAAA	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF2_chrX_148495617_149005663	148985285	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01258.hp1 HG01433.hp1 HG01192.hp1 HG01258.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0104 a0001c0001t0008 a0001c0001t0104	a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0104g0049 a0001c0001t0008g0059 a0001c0001t0008g0073 a0001c0001t0104g0049	3	169	0.0178	12	c.362 others(31): Show c.3624-2059_3624-2048dupTTTTTTTTTTTT	AFF2	ENSG00000155966.14	transcript	ENST00000370460.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chrX	TogoVar
AFF3_chr2_99540419_100147590	99618893	G G	GATTCATT others(5): Show GATTCATTCATTC	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01081.hp1 HG02055.hp2 others(5): Show HG00609.hp2 HG01081.hp1 HG02055.hp2 HG02965.hp1 HG03471.hp1 HG03516.hp2 HG03834.hp2 HG04199.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0008 others(1): Show a0001c0001 a0001c0004 a0001c0008 a0002c0002	a0001c0001t0024 a0001c0001t0028 a0001c0004t0005 others(4): Show a0001c0001t0024 a0001c0001t0028 a0001c0004t0005 a0001c0004t0029 a0001c0008t0005 a0002c0002t0002 a0002c0002t0023	a0001c0001t0024g0058 a0001c0001t0028g0061 a0001c0004t0005g0094 others(5): Show a0001c0001t0024g0058 a0001c0001t0028g0061 a0001c0004t0005g0094 a0001c0004t0029g0098 a0001c0008t0005g0079 a0002c0002t0002g0021 a0002c0002t0002g0031 a0002c0002t0023g0054	8	100	0.0800	12	c.118 others(33): Show c.1185-17284_1185-17273dupGAATGAATGAAT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99634964	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp1 HG02258.hp2 others(3): Show HG01891.hp2 HG02258.hp1 HG02258.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0008 others(1): Show a0001c0001 a0001c0004 a0001c0008 a0002c0002	a0001c0001t0004 a0001c0001t0030 a0001c0004t0029 others(2): Show a0001c0001t0004 a0001c0001t0030 a0001c0004t0029 a0001c0008t0005 a0002c0002t0002	a0001c0001t0004g0050 a0001c0001t0004g0082 a0001c0001t0030g0077 others(3): Show a0001c0001t0004g0050 a0001c0001t0004g0082 a0001c0001t0030g0077 a0001c0004t0029g0098 a0001c0008t0005g0091 a0002c0002t0002g0028	6	100	0.0600	12	c.118 others(33): Show c.1184+14650_1184+14661dupGTGTGTGTGTGT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648905	A A	ACTCTCTC others(5): Show ACTCTCTCTCTCT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0024 a0001c0001t0006g0024	1	100	0.0100	12	c.118 others(29): Show c.1184+720_1184+721insAGAGAGAGAGAG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99648917	A A	ACACACAC others(5): Show ACACACACACACT	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02895.hp2 HG02809.hp1 HG02895.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0001 a0002c0007t0008 a0002c0007t0001 a0002c0007t0008	a0002c0007t0001g0060 a0002c0007t0008g0006 a0002c0007t0001g0060 a0002c0007t0008g0006	2	100	0.0200	12	c.118 others(29): Show c.1184+708_1184+709insAGTGTGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	13/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99650796	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0064 a0001c0003t0002g0064	1	100	0.0100	12	c.114 others(31): Show c.1144-1142_1144-1131dupCACACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	12/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99724271	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01884.hp2 HG02293.hp1 others(1): Show HG00438.hp2 HG01884.hp2 HG02293.hp1 HG02559.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0005t0027 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0027 a0002c0002t0013	a0001c0001t0001g0062 a0001c0001t0002g0047 a0001c0005t0027g0085 others(1): Show a0001c0001t0001g0062 a0001c0001t0002g0047 a0001c0005t0027g0085 a0002c0002t0013g0005	4	100	0.0400	12	c.109 others(31): Show c.1091+2794_1091+2805dupAAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	11/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99805813	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0034 a0003c0006t0001g0034	1	100	0.0100	12	c.921 others(31): Show c.921+31652_921+31663dupGTGTGTGTGTGT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	8/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99946473	T T	TAAAAAAA others(5): Show TAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0003 a0001c0005t0003	a0001c0005t0003g0071 a0001c0005t0003g0071	1	100	0.0100	12	c.873 others(31): Show c.873+60147_873+60158dupTTTTTTTTTTTT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	99969478	C C	CATTTATT others(5): Show CATTTATTTATTT	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01358.hp1 HG02559.hp2 others(4): Show HG01261.hp1 HG01358.hp1 HG02559.hp2 HG02647.hp1 HG02809.hp2 HG03209.hp1 HG03834.hp1	a0001 a0002 a0001 a0002	a0001c0005 a0002c0007 a0001c0005 a0002c0007	a0001c0005t0001 a0001c0005t0003 a0001c0005t0004 others(3): Show a0001c0005t0001 a0001c0005t0003 a0001c0005t0004 a0001c0005t0005 a0001c0005t0027 a0002c0007t0008	a0001c0005t0001g0070 a0001c0005t0003g0071 a0001c0005t0004g0083 others(4): Show a0001c0005t0001g0070 a0001c0005t0003g0071 a0001c0005t0004g0083 a0001c0005t0004g0086 a0001c0005t0005g0092 a0001c0005t0027g0085 a0002c0007t0008g0007	7	100	0.0700	12	c.873 others(31): Show c.873+37142_873+37153dupAAATAAATAAAT	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	7/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100014783	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0023 a0002c0002t0023	a0002c0002t0023g0054 a0002c0002t0023g0054	1	100	0.0100	12	c.54- others(27): Show c.54-5863_54-5852dupAAAAAAAAAAAA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	4/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100056059	T T	TCACACAC others(5): Show TCACACACACACA	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0063 a0001c0003t0006g0063	1	100	0.0100	12	c.54- others(29): Show c.54-47128_54-47127insTGTGTGTGTGTG	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	4/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100104798	A A	AGCCGCCG others(5): Show AGCCGCCGCCGCC	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02630.hp2 HG00609.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0031 a0001c0001t0028 a0001c0001t0031	a0001c0001t0028g0061 a0001c0001t0031g0049 a0001c0001t0028g0061 a0001c0001t0031g0049	2	100	0.0200	12	c.-64 others(27): Show c.-64-292_-64-281dupGGCGGCGGCGGC	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	3/24			chr2	TogoVar

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