Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AFF3_chr2_99540419_100147590	100129382	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01884.hp2 HG02922.hp2 HG00609.hp1 HG01884.hp2 HG02922.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0001c0004 a0002c0002 a0001c0003 a0001c0004 a0002c0002	a0001c0003t0001 a0001c0004t0014 a0002c0002t0013 a0001c0003t0001 a0001c0004t0014 a0002c0002t0013	a0001c0003t0001g0072 a0001c0004t0014g0004 a0002c0002t0013g0005 a0001c0003t0001g0072 a0001c0004t0014g0004 a0002c0002t0013g0005	3	51	0.0588	12	c.-22 others(27): Show c.-227-88_-227-77dupCACACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFF3_chr2_99540419_100147590	100129416	G G	GTGTGTGT others(5): Show GTGTGTGTGTGTA	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02055.hp2 HG02895.hp2 others(5): Show HG01358.hp1 HG02055.hp2 HG02895.hp2 HG03130.hp1 HG03195.hp1 HG03834.hp1 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0001c0005 a0002c0007 a0001c0004 a0001c0005 a0002c0007	a0001c0004t0004 a0001c0004t0005 a0001c0004t0007 others(3): Show a0001c0004t0004 a0001c0004t0005 a0001c0004t0007 a0001c0005t0001 a0001c0005t0003 a0002c0007t0001	a0001c0004t0004g0097 a0001c0004t0005g0094 a0001c0004t0007g0093 others(5): Show a0001c0004t0004g0097 a0001c0004t0005g0094 a0001c0004t0007g0093 a0001c0004t0007g0095 a0001c0004t0007g0096 a0001c0005t0001g0070 a0001c0005t0003g0071 a0002c0007t0001g0060	8	73	0.1096	12	c.-22 others(29): Show c.-227-111_-227-110insTACACACACACA	AFF3	ENSG00000144218.21	transcript	ENST00000672756.2	protein_coding	1/24			chr2	TogoVar
AFF4_chr5_132870395_132968634	132917708	T T	TTCTTTTC others(5): Show TTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0211 a0001c0001t0005g0211	1	363	0.0028	12	c.105 others(31): Show c.1050+9412_1050+9413insGAAAAGAAAAGA	AFF4	ENSG00000072364.13	transcript	ENST00000265343.10	protein_coding	5/20			chr5	TogoVar
AFG3L2_chr18_12323944_12382227	12378572	A A	AATTATTA others(5): Show AATTATTATTATT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02622.hp2 HG03098.hp2 others(5): Show HG02145.hp1 HG02622.hp2 HG03098.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 NA18522.hp1 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0078 a0001c0003t0002g0079 a0001c0003t0002g0080 others(5): Show a0001c0003t0002g0078 a0001c0003t0002g0079 a0001c0003t0002g0080 a0001c0003t0002g0082 a0001c0003t0002g0083 a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0002g0089	8	290	0.0276	12	c.-14 others(23): Show c.-1491_-1490insAATAATAATAAT	AFG3L2	ENSG00000141385.12	transcript	ENST00000269143.8	protein_coding		1346		chr18	TogoVar
AFMID_chr17_78182362_78212702	78187960	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18943.hp2 NA18968.hp1 NA18975.hp2 others(6): Show NA18943.hp2 NA18968.hp1 NA18975.hp2 NA18978.hp1 NA18979.hp2 NA18992.hp2 NA18998.hp1 NA19000.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0012 a0001c0014t0007	a0001c0001t0003g0344 a0001c0001t0004g0303 a0001c0001t0004g0305 others(6): Show a0001c0001t0003g0344 a0001c0001t0004g0303 a0001c0001t0004g0305 a0001c0001t0007g0301 a0001c0001t0007g0304 a0001c0001t0007g0307 a0001c0001t0012g0306 a0001c0001t0012g0308 a0001c0014t0007g0302	9	133	0.0677	12	c.63+ others(25): Show c.63+545_63+556dupAAAAAAAAAAAA	AFMID	ENSG00000183077.16	transcript	ENST00000409257.10	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr17	TogoVar
AFM_chr4_73476745_73509001	73484440	C C	CTCTTTCT others(5): Show CTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 NA18950.hp1 NA18962.hp1 others(1): Show HG01109.hp1 NA18950.hp1 NA18962.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0155 others(1): Show a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0155 a0001c0001t0001g0156	4	107	0.0374	12	c.270 others(27): Show c.270+105_270+116dupTTTCTTTCTTTC	AFM	ENSG00000079557.5	transcript	ENST00000226355.5	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFM_chr4_73476745_73509001	73485590	A A	AGAAGGAG others(5): Show AGAAGGAGAAGAG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0008 a0008	a0008c0006 a0008c0006	a0008c0006t0001 a0008c0006t0001	a0008c0006t0001g0106 a0008c0006t0001g0106	1	171	0.0058	12	c.271 others(27): Show c.271-268_271-267insGAGAAGAGGAAG	AFM	ENSG00000079557.5	transcript	ENST00000226355.5	protein_coding	3/14		INFO_REALIGN_3_PRIME	chr4	TogoVar
AFP_chr4_73431221_73461174	73434131	A A	ATATATCT others(5): Show ATATATCTACATC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(72): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00408.hp1 HG00558.hp1 HG00642.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01433.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp1 HG02148.hp2 HG02273.hp1 HG02293.hp2 HG02523.hp2 HG02572.hp1 HG02717.hp1 HG02809.hp2 HG03139.hp1 HG03209.hp2 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG04184.hp2 HG04228.hp2 NA18943.hp1 NA18945.hp2 NA18947.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18962.hp1 NA18965.hp1 NA18967.hp2 NA18977.hp2 NA18978.hp1 NA18983.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp2 NA19010.hp2 NA19056.hp2 NA19057.hp1 NA19060.hp2 NA19062.hp2 NA19064.hp1 NA19075.hp2 NA19085.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0005c0008	a0001c0001t0001 a0001c0001t0002 a0001c0005t0002 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0002 a0002c0002t0002 a0005c0008t0002	a0001c0001t0001g0003 a0001c0001t0001g0077 a0001c0001t0001g0109 others(26): Show a0001c0001t0001g0003 a0001c0001t0001g0077 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0011 a0001c0001t0002g0020 a0001c0001t0002g0031 a0001c0001t0002g0035 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0085 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0091 a0001c0001t0002g0098 a0001c0005t0002g0002 a0001c0005t0002g0093 a0002c0002t0002g0002 a0002c0002t0002g0039 a0005c0008t0002g0076 a0005c0008t0002g0083	75	373	0.2011	12	c.-21 others(23): Show c.-2132_-2131insTATATCTACATC	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		2089		chr4	TogoVar
AFP_chr4_73431221_73461174	73434131	A A	ATATATCT others(5): Show ATATATCTACTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG02735.hp1 HG02738.hp2 others(2): Show HG01256.hp1 HG02735.hp1 HG02738.hp2 HG03688.hp1 NA19085.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0002 a0003c0006t0002 a0001c0001t0002 a0003c0006t0002	a0001c0001t0002g0012 a0003c0006t0002g0012 a0001c0001t0002g0012 a0003c0006t0002g0012	5	303	0.0165	12	c.-21 others(23): Show c.-2132_-2131insTATATCTACTTC	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		2089		chr4	TogoVar
AFP_chr4_73431221_73461174	73434146	C C	CATCTATA others(5): Show CATCTATATCTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp2 HG02071.hp2 HG02258.hp1 others(25): Show HG01981.hp2 HG02071.hp2 HG02258.hp1 HG02572.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03927.hp2 NA18939.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18952.hp2 NA18967.hp1 NA18970.hp2 NA18984.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA19000.hp1 NA19063.hp2 NA19077.hp2 NA19082.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0016 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0030 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0055 a0001c0001t0001g0066 a0001c0001t0002g0014 a0001c0001t0003g0001 a0001c0001t0003g0067	28	42	0.6667	12	c.-21 others(23): Show c.-2117_-2116insATCTATATCTAT	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		2074		chr4	TogoVar
AFP_chr4_73431221_73461174	73459543	T T	TTTTATTT others(5): Show TTTTATTTATTTA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG01070.hp1 others(17): Show HG00140.hp1 HG00639.hp2 HG01070.hp1 HG01099.hp2 HG01109.hp1 HG01123.hp1 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG02165.hp2 HG02451.hp2 HG03017.hp2 HG03540.hp1 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp1 HG04228.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0009 a0001c0001 a0004c0009	a0001c0001t0002 a0004c0009t0002 a0001c0001t0002 a0004c0009t0002	a0001c0001t0002g0004 a0001c0001t0002g0021 a0001c0001t0002g0024 others(2): Show a0001c0001t0002g0004 a0001c0001t0002g0021 a0001c0001t0002g0024 a0001c0001t0002g0111 a0004c0009t0002g0004	20	343	0.0583	12	c.39 others(23): Show c.3923_*3924insTTTATTTATTTA	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		3370		chr4	TogoVar
AFP_chr4_73431221_73461174	73460972	C C	CCCCCATC others(5): Show CCCCCATCCCCCT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18964.hp1 NA19004.hp2 NA18964.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0013 a0001c0001t0002g0094 a0001c0001t0001g0013 a0001c0001t0002g0094	2	387	0.0052	12	c.53 others(23): Show c.5352_*5353insCCCCATCCCCCT	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		4799		chr4	TogoVar
AFP_chr4_73431221_73461174	73461141	T T	TTTCTTCT others(5): Show TTTCTTCTTCTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01891.hp2 HG02258.hp2 others(4): Show HG01243.hp1 HG01891.hp2 HG02258.hp2 HG02622.hp2 HG02886.hp2 HG03453.hp1 HG03540.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0002 a0002c0002t0002	a0001c0001t0001g0044 a0001c0001t0001g0109 a0001c0001t0001g0110 others(3): Show a0001c0001t0001g0044 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0002g0038 a0001c0004t0002g0025 a0002c0002t0002g0036	7	128	0.0547	12	c.55 others(23): Show c.5521_*5522insTTCTTCTTCTTC	AFP	ENSG00000081051.8	transcript	ENST00000395792.7	protein_coding		4968		chr4	TogoVar
AFTPH_chr2_64519328_64598005	64596329	T T	TACACACA others(5): Show TACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01993.hp1 HG03486.hp1 NA18946.hp1 others(10): Show HG01993.hp1 HG03486.hp1 NA18946.hp1 NA18948.hp2 NA18950.hp1 NA18963.hp2 NA18967.hp1 NA18975.hp1 NA18982.hp1 NA19058.hp2 NA19084.hp2 NA19090.hp1 NA21309.hp2	a0001 a0011 a0001 a0011	a0001c0001 a0011c0011 a0001c0001 a0011c0011	a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 others(1): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0013 a0011c0011t0001	a0001c0001t0001g0003 a0001c0001t0001g0240 a0001c0001t0001g0243 others(10): Show a0001c0001t0001g0003 a0001c0001t0001g0240 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0252 a0001c0001t0001g0262 a0001c0001t0007g0248 a0001c0001t0007g0251 a0001c0001t0013g0236 a0011c0011t0001g0233	13	81	0.1605	12	c.42 others(23): Show c.4294_*4295insACACACACACAC	AFTPH	ENSG00000119844.17	transcript	ENST00000409933.6	protein_coding		3325		chr2	TogoVar
AGAP1_chr2_235489043_236136793	235494004	C C	CGGGCGCG others(5): Show CGGGCGCGGGCGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG02145.hp1 HG03195.hp1 others(1): Show HG02109.hp2 HG02145.hp1 HG03195.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008	a0001c0001t0011 a0001c0002t0001 a0001c0003t0021 others(1): Show a0001c0001t0011 a0001c0002t0001 a0001c0003t0021 a0001c0008t0028	a0001c0001t0011g0020 a0001c0002t0001g0013 a0001c0003t0021g0023 others(1): Show a0001c0001t0011g0020 a0001c0002t0001g0013 a0001c0003t0021g0023 a0001c0008t0028g0029	4	81	0.0494	12	c.-68 others(21): Show c.-683_-682insGGGCGCGGGCGA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding		38		chr2	TogoVar
AGAP1_chr2_235489043_236136793	235511880	A A	ATGTGTGT others(5): Show ATGTGTGTGAATG	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp1 others(90): Show HG00438.hp1 HG00438.hp2 HG00642.hp1 HG00642.hp2 HG00741.hp1 HG01106.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02280.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(18): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0009 a0001c0010 a0001c0011 a0001c0012 a0001c0014 a0001c0016 a0001c0017 a0001c0018 a0001c0019 a0001c0021 a0002c0004 a0002c0007 a0002c0013 a0002c0020 a0003c0015	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(66): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0044 a0001c0001t0048 a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 a0001c0002t0013 a0001c0002t0014 a0001c0002t0032 a0001c0002t0034 a0001c0002t0038 a0001c0002t0039 a0001c0002t0042 a0001c0002t0043 a0001c0003t0002 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0003t0020 a0001c0003t0021 a0001c0003t0022 a0001c0003t0025 a0001c0003t0047 a0001c0005t0001 a0001c0005t0004 a0001c0005t0013 a0001c0005t0031 a0001c0005t0040 a0001c0006t0001 a0001c0006t0006 a0001c0006t0033 a0001c0006t0037 a0001c0006t0046 a0001c0008t0001 a0001c0008t0028 a0001c0009t0015 a0001c0009t0017 a0001c0010t0001 a0001c0011t0036 a0001c0012t0009 a0001c0014t0016 a0001c0016t0007 a0001c0017t0008 a0001c0018t0049 a0001c0019t0007 a0001c0021t0002 a0002c0004t0001 a0002c0004t0006 a0002c0004t0029 a0002c0004t0045 a0002c0007t0005 a0002c0007t0008 a0002c0007t0018 a0002c0007t0023 a0002c0013t0041 a0002c0020t0001 a0003c0015t0002	a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 others(90): Show a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0060 a0001c0001t0002g0070 a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0009g0078 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0024g0074 a0001c0001t0026g0095 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0013 a0001c0002t0001g0018 a0001c0002t0001g0027 a0001c0002t0001g0068 a0001c0002t0001g0076 a0001c0002t0004g0072 a0001c0002t0004g0077 a0001c0002t0006g0093 a0001c0002t0013g0035 a0001c0002t0014g0052 a0001c0002t0014g0073 a0001c0002t0032g0051 a0001c0002t0034g0084 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0002t0042g0067 a0001c0002t0043g0064 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0003t0020g0053 a0001c0003t0021g0023 a0001c0003t0022g0055 a0001c0003t0025g0015 a0001c0003t0047g0033 a0001c0005t0001g0057 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0005t0040g0006 a0001c0006t0001g0016 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0037g0021 a0001c0006t0046g0040 a0001c0008t0001g0061 a0001c0008t0028g0029 a0001c0009t0015g0038 a0001c0009t0017g0037 a0001c0010t0001g0032 a0001c0011t0036g0009 a0001c0012t0009g0075 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0017t0008g0092 a0001c0018t0049g0080 a0001c0019t0007g0056 a0001c0021t0002g0091 a0002c0004t0001g0017 a0002c0004t0001g0025 a0002c0004t0001g0082 a0002c0004t0006g0024 a0002c0004t0029g0083 a0002c0004t0045g0039 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0008g0011 a0002c0007t0018g0028 a0002c0007t0023g0085 a0002c0013t0041g0081 a0002c0020t0001g0022 a0003c0015t0002g0079	93	98	0.9490	12	c.163 others(31): Show c.163+17034_163+17045dupTGTGTGAATGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235512095	G G	GTGTGTGT others(5): Show GTGTGTGTGAGTA	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01106.hp2 HG02572.hp2 others(4): Show HG00741.hp1 HG01106.hp2 HG02572.hp2 HG03041.hp1 HG03516.hp2 HG03540.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0006 others(2): Show a0001c0001 a0001c0005 a0001c0006 a0001c0019 a0002c0004	a0001c0001t0002 a0001c0005t0040 a0001c0006t0046 others(2): Show a0001c0001t0002 a0001c0005t0040 a0001c0006t0046 a0001c0019t0007 a0002c0004t0045	a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060 others(4): Show a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060 a0001c0005t0040g0006 a0001c0006t0046g0040 a0001c0019t0007g0056 a0002c0004t0045g0039	7	31	0.2258	12	c.163 others(31): Show c.163+17255_163+17256insGTATGTGTGTGA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235513240	C C	CCGGGCGC others(5): Show CCGGGCGCGGGCG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00642.hp1 HG00642.hp2 others(65): Show HG00438.hp2 HG00642.hp1 HG00642.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01192.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02280.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02922.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03831.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(15): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0010 a0001c0011 a0001c0012 a0001c0016 a0001c0018 a0001c0019 a0001c0021 a0002c0004 a0002c0007 a0002c0013 a0002c0020 a0003c0015	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(48): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0024 a0001c0001t0027 a0001c0001t0044 a0001c0002t0001 a0001c0002t0004 a0001c0002t0013 a0001c0002t0014 a0001c0002t0032 a0001c0002t0034 a0001c0002t0042 a0001c0003t0002 a0001c0003t0003 a0001c0003t0012 a0001c0003t0021 a0001c0003t0025 a0001c0003t0047 a0001c0005t0001 a0001c0005t0004 a0001c0005t0013 a0001c0005t0031 a0001c0005t0040 a0001c0006t0001 a0001c0006t0006 a0001c0006t0033 a0001c0006t0037 a0001c0008t0001 a0001c0008t0028 a0001c0010t0001 a0001c0011t0036 a0001c0012t0009 a0001c0016t0007 a0001c0018t0049 a0001c0019t0007 a0001c0021t0002 a0002c0004t0001 a0002c0004t0006 a0002c0004t0029 a0002c0007t0005 a0002c0007t0018 a0002c0007t0023 a0002c0013t0041 a0002c0020t0001 a0003c0015t0002	a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 others(65): Show a0001c0001t0002g0002 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0049 a0001c0001t0002g0060 a0001c0001t0002g0070 a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0009g0078 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0024g0074 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0013 a0001c0002t0001g0018 a0001c0002t0001g0027 a0001c0002t0001g0076 a0001c0002t0004g0072 a0001c0002t0004g0077 a0001c0002t0013g0035 a0001c0002t0014g0073 a0001c0002t0032g0051 a0001c0002t0034g0084 a0001c0002t0042g0067 a0001c0003t0002g0005 a0001c0003t0003g0001 a0001c0003t0012g0066 a0001c0003t0021g0023 a0001c0003t0025g0015 a0001c0003t0047g0033 a0001c0005t0001g0057 a0001c0005t0004g0058 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0005t0040g0006 a0001c0006t0001g0016 a0001c0006t0006g0019 a0001c0006t0033g0087 a0001c0006t0037g0021 a0001c0008t0001g0061 a0001c0008t0028g0029 a0001c0010t0001g0032 a0001c0011t0036g0009 a0001c0012t0009g0075 a0001c0016t0007g0089 a0001c0018t0049g0080 a0001c0019t0007g0056 a0001c0021t0002g0091 a0002c0004t0001g0017 a0002c0004t0001g0025 a0002c0004t0001g0082 a0002c0004t0006g0024 a0002c0004t0029g0083 a0002c0007t0005g0026 a0002c0007t0018g0028 a0002c0007t0023g0085 a0002c0013t0041g0081 a0002c0020t0001g0022 a0003c0015t0002g0079	68	98	0.6939	12	c.163 others(31): Show c.163+18401_163+18402insCGCGGGCGCGGG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235516055	T T	TCTGCTGC others(5): Show TCTGCTGCTGCTG	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03041.hp1 HG03540.hp1 HG02572.hp2 HG03041.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0060	3	39	0.0769	12	c.163 others(31): Show c.163+21234_163+21245dupCTGCTGCTGCTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536254	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02145.hp1 HG02622.hp1 others(6): Show HG01496.hp2 HG02145.hp1 HG02622.hp1 HG02809.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp2 HG03831.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0008 others(2): Show a0001c0001 a0001c0005 a0001c0008 a0002c0007 a0002c0013	a0001c0001t0002 a0001c0001t0011 a0001c0001t0027 others(6): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0027 a0001c0005t0013 a0001c0005t0031 a0001c0008t0001 a0001c0008t0028 a0002c0007t0005 a0002c0013t0041	a0001c0001t0002g0046 a0001c0001t0011g0098 a0001c0001t0027g0062 others(6): Show a0001c0001t0002g0046 a0001c0001t0011g0098 a0001c0001t0027g0062 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0008t0001g0061 a0001c0008t0028g0029 a0002c0007t0005g0094 a0002c0013t0041g0081	9	14	0.6429	12	c.163 others(31): Show c.163+41417_163+41428dupCACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536352	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0013	a0001c0005t0013g0050 a0001c0005t0013g0050	1	6	0.1667	12	c.163 others(31): Show c.163+41515_163+41526dupCACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536406	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01168.hp2 HG01884.hp1 others(13): Show HG01106.hp2 HG01168.hp2 HG01884.hp1 HG02135.hp1 HG02145.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp2 HG02922.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03486.hp2 NA19011.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0008 a0001c0021 a0002c0004	a0001c0001t0012 a0001c0001t0027 a0001c0002t0001 others(11): Show a0001c0001t0012 a0001c0001t0027 a0001c0002t0001 a0001c0002t0043 a0001c0003t0021 a0001c0003t0047 a0001c0005t0001 a0001c0005t0004 a0001c0006t0006 a0001c0008t0001 a0001c0008t0028 a0001c0021t0002 a0002c0004t0001 a0002c0004t0045	a0001c0001t0012g0071 a0001c0001t0027g0062 a0001c0002t0001g0018 others(13): Show a0001c0001t0012g0071 a0001c0001t0027g0062 a0001c0002t0001g0018 a0001c0002t0043g0064 a0001c0003t0021g0023 a0001c0003t0047g0033 a0001c0005t0001g0057 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0006t0006g0019 a0001c0008t0001g0061 a0001c0008t0028g0029 a0001c0021t0002g0091 a0002c0004t0001g0025 a0002c0004t0045g0039	16	23	0.6957	12	c.163 others(31): Show c.163+41577_163+41588dupCACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235536468	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02572.hp2 HG02809.hp1 others(4): Show HG01496.hp2 HG02572.hp2 HG02809.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0002 a0001c0001t0011 a0001c0003t0021 others(3): Show a0001c0001t0002 a0001c0001t0011 a0001c0003t0021 a0001c0003t0047 a0001c0005t0013 a0001c0005t0031	a0001c0001t0002g0046 a0001c0001t0002g0060 a0001c0001t0011g0098 others(4): Show a0001c0001t0002g0046 a0001c0001t0002g0060 a0001c0001t0011g0098 a0001c0003t0021g0023 a0001c0003t0047g0033 a0001c0005t0013g0050 a0001c0005t0031g0031	7	32	0.2188	12	c.163 others(31): Show c.163+41635_163+41646dupCACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235538427	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01192.hp1 HG02109.hp2 others(4): Show HG01168.hp2 HG01192.hp1 HG02109.hp2 HG02135.hp2 HG02723.hp1 HG02896.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0004	a0001c0001t0002 a0001c0001t0011 a0001c0001t0044 others(4): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0044 a0001c0002t0001 a0001c0002t0034 a0001c0006t0037 a0002c0004t0001	a0001c0001t0002g0070 a0001c0001t0011g0020 a0001c0001t0044g0041 others(4): Show a0001c0001t0002g0070 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0001g0076 a0001c0002t0034g0084 a0001c0006t0037g0021 a0002c0004t0001g0025	7	26	0.2692	12	c.163 others(31): Show c.163+43601_163+43612dupTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235538460	T T	TGTGTGTG others(5): Show TGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02647.hp2 HG02922.hp1 HG02572.hp1 HG02647.hp2 HG02922.hp1	a0001 a0001	a0001c0005 a0001c0021 a0001c0005 a0001c0021	a0001c0005t0004 a0001c0021t0002 a0001c0005t0004 a0001c0021t0002	a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0021t0002g0091 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0021t0002g0091	3	89	0.0337	12	c.163 others(31): Show c.163+43612_163+43613insTGTGTGTGTGCG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235571932	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01106.hp2 HG01192.hp2 others(8): Show HG00741.hp1 HG01106.hp2 HG01192.hp2 HG01358.hp1 HG02080.hp2 HG02109.hp2 HG02135.hp1 HG02622.hp1 HG03579.hp2 HG03831.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0002c0004 a0002c0007 a0002c0013	a0001c0001t0005 a0001c0001t0011 a0001c0001t0044 others(8): Show a0001c0001t0005 a0001c0001t0011 a0001c0001t0044 a0001c0002t0001 a0001c0003t0012 a0001c0006t0006 a0001c0006t0046 a0002c0004t0006 a0002c0004t0045 a0002c0007t0005 a0002c0013t0041	a0001c0001t0005g0012 a0001c0001t0011g0020 a0001c0001t0044g0041 others(8): Show a0001c0001t0005g0012 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0001g0030 a0001c0003t0012g0066 a0001c0006t0006g0019 a0001c0006t0046g0040 a0002c0004t0006g0042 a0002c0004t0045g0039 a0002c0007t0005g0026 a0002c0013t0041g0081	11	30	0.3667	12	c.163 others(31): Show c.163+77099_163+77110dupGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235636115	G G	GTAAATAA others(5): Show GTAAATAAATAAA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02723.hp2 HG02809.hp1 others(2): Show HG02717.hp2 HG02723.hp2 HG02809.hp1 HG03540.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0026 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0026 a0001c0005t0031	a0001c0001t0002g0047 a0001c0001t0003g0034 a0001c0001t0003g0090 others(2): Show a0001c0001t0002g0047 a0001c0001t0003g0034 a0001c0001t0003g0090 a0001c0001t0026g0095 a0001c0005t0031g0031	5	24	0.2083	12	c.164 others(31): Show c.164-73035_164-73024dupTAAATAAATAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235682797	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02145.hp2 HG02818.hp2 others(3): Show HG02109.hp2 HG02145.hp2 HG02818.hp2 HG02922.hp2 NA19030.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 others(3): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0044 a0001c0002t0004 a0001c0002t0014	a0001c0001t0003g0036 a0001c0001t0010g0003 a0001c0001t0011g0020 others(3): Show a0001c0001t0003g0036 a0001c0001t0010g0003 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0004g0077 a0001c0002t0014g0052	6	13	0.4615	12	c.164 others(31): Show c.164-26371_164-26360dupGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235686665	A A	ATATATAT others(5): Show ATATATATATATT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0046 a0001c0006t0046	a0001c0006t0046g0040 a0001c0006t0046g0040	1	38	0.0263	12	c.164 others(31): Show c.164-22513_164-22512insATATATATATTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235702934	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02615.hp1 HG02615.hp2 others(12): Show HG01884.hp2 HG02615.hp1 HG02615.hp2 HG02717.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03831.hp1 NA18522.hp1 NA18906.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0019 others(2): Show a0001c0001 a0001c0002 a0001c0019 a0002c0007 a0003c0015	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 others(11): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0026 a0001c0001t0048 a0001c0002t0014 a0001c0019t0007 a0002c0007t0005 a0003c0015t0002	a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0005g0007 others(12): Show a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0005g0007 a0001c0001t0007g0008 a0001c0001t0009g0078 a0001c0001t0010g0014 a0001c0001t0011g0098 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0026g0095 a0001c0001t0048g0054 a0001c0002t0014g0073 a0001c0019t0007g0056 a0002c0007t0005g0026 a0003c0015t0002g0079	15	41	0.3659	12	c.164 others(29): Show c.164-6244_164-6233dupTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235721477	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0032 a0001c0010t0001g0032	1	33	0.0303	12	c.310 others(29): Show c.310+3849_310+3860dupGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235723765	C C	CGTTGGTT others(5): Show CGTTGGTTGGTTG	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03486.hp1 HG02818.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0004 a0001c0001t0002 a0001c0002t0004	a0001c0001t0002g0049 a0001c0002t0004g0077 a0001c0001t0002g0049 a0001c0002t0004g0077	2	24	0.0833	12	c.310 others(29): Show c.310+6148_310+6159dupTGGTTGGTTGGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235746377	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02896.hp1 NA21309.hp2 HG02109.hp2 HG02896.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0001t0044 a0001c0002t0001 a0001c0001t0011 a0001c0001t0044 a0001c0002t0001	a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0001g0076 a0001c0001t0011g0020 a0001c0001t0044g0041 a0001c0002t0001g0076	3	7	0.4286	12	c.538 others(29): Show c.538+1561_538+1572dupTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235770133	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0037 a0001c0006t0037	a0001c0006t0037g0021 a0001c0006t0037g0021	1	77	0.0130	12	c.673 others(31): Show c.673+19646_673+19657dupTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	6/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235867536	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG03579.hp1 HG01168.hp1 HG03579.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0026 a0002c0004t0029 a0001c0001t0026 a0002c0004t0029	a0001c0001t0026g0095 a0002c0004t0029g0083 a0001c0001t0026g0095 a0002c0004t0029g0083	2	24	0.0833	12	c.105 others(33): Show c.1051-15781_1051-15770dupTGTGTGTGTGTG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235867574	T T	TGTGTGTG others(5): Show TGTGTGTGTGTGC	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0059 a0001c0002t0039g0059	1	96	0.0104	12	c.105 others(33): Show c.1051-15770_1051-15769insTGTGTGTGTGCG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	9/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235890942	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03041.hp1 NA18522.hp1 others(1): Show HG02647.hp2 HG03041.hp1 NA18522.hp1 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0005 others(1): Show a0001c0001 a0001c0003 a0001c0005 a0003c0015	a0001c0001t0002 a0001c0003t0020 a0001c0005t0004 others(1): Show a0001c0001t0002 a0001c0003t0020 a0001c0005t0004 a0003c0015t0002	a0001c0001t0002g0046 a0001c0003t0020g0053 a0001c0005t0004g0088 others(1): Show a0001c0001t0002g0046 a0001c0003t0020g0053 a0001c0005t0004g0088 a0003c0015t0002g0079	4	66	0.0606	12	c.115 others(31): Show c.1155+7504_1155+7505insAAAAAAAAAAAA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235894634	T T	TACACACA others(5): Show TACACACACATAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03041.hp2 HG03098.hp1 others(3): Show HG02647.hp1 HG03041.hp2 HG03098.hp1 HG03195.hp1 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0003 a0001c0001t0019 a0001c0001t0024 others(3): Show a0001c0001t0003 a0001c0001t0019 a0001c0001t0024 a0001c0002t0038 a0001c0002t0042 a0001c0003t0021	a0001c0001t0003g0036 a0001c0001t0019g0065 a0001c0001t0024g0074 others(3): Show a0001c0001t0003g0036 a0001c0001t0019g0065 a0001c0001t0024g0074 a0001c0002t0038g0086 a0001c0002t0042g0067 a0001c0003t0021g0023	6	95	0.0632	12	c.115 others(33): Show c.1155+11194_1155+11195insTACACACACACA	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235895699	T T	TTGGATGG others(5): Show TTGGATGGATGGA	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0005 a0002c0007t0005	a0002c0007t0005g0026 a0002c0007t0005g0026	1	76	0.0132	12	c.115 others(33): Show c.1155+12289_1155+12300dupGATGGATGGATG	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	10/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235971741	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0052 a0001c0002t0014g0052	1	61	0.0164	12	c.164 others(31): Show c.1645+3153_1645+3164dupTATTTATTTATT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	235987108	G G	GTTATTTA others(5): Show GTTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03471.hp2 HG02145.hp1 HG03471.hp2	a0001 a0001	a0001c0008 a0001c0009 a0001c0008 a0001c0009	a0001c0008t0028 a0001c0009t0015 a0001c0008t0028 a0001c0009t0015	a0001c0008t0028g0029 a0001c0009t0015g0038 a0001c0008t0028g0029 a0001c0009t0015g0038	2	21	0.0952	12	c.164 others(33): Show c.1645+18507_1645+18518dupTATTTATTTATT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236024034	G G	GTTTTGTT others(5): Show GTTTTGTTTTGTT	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0036 a0001c0011t0036	a0001c0011t0036g0009 a0001c0011t0036g0009	1	78	0.0128	12	c.164 others(33): Show c.1646-12523_1646-12522insGTTTTGTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	13/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236047598	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0015 a0001c0009t0015	a0001c0009t0015g0038 a0001c0009t0015g0038	1	30	0.0333	12	c.189 others(31): Show c.1892-1450_1892-1439dupTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	15/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236078037	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02717.hp2 HG02647.hp1 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0042 a0001c0001t0003 a0001c0002t0042	a0001c0001t0003g0090 a0001c0002t0042g0067 a0001c0001t0003g0090 a0001c0002t0042g0067	2	26	0.0769	12	c.211 others(33): Show c.2114+28782_2114+28793dupGTGTGTGTGTGT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236116357	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03098.hp2 HG03486.hp1 HG03041.hp2 HG03098.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0002 a0001c0001t0019 a0001c0018t0049 a0001c0001t0002 a0001c0001t0019 a0001c0018t0049	a0001c0001t0002g0049 a0001c0001t0019g0065 a0001c0018t0049g0080 a0001c0001t0002g0049 a0001c0001t0019g0065 a0001c0018t0049g0080	3	77	0.0390	12	c.211 others(31): Show c.2115-3825_2115-3824insTTTTTTTTTTTT	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	16/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP3_chr7_151081475_151149434	151093622	C C	CTCTTTGC others(5): Show CTCTTTGCTGGAT	intron_variant intron_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0137 a0001c0001t0002g0137	1	352	0.0028	12	c.331 others(29): Show c.331+6552_331+6563dupCTTTGCTGGATT	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGAP3_chr7_151081475_151149434	151105792	C C	CCACACAC others(5): Show CCACACACACACA	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG02056.hp1 HG02135.hp2 others(9): Show HG00423.hp1 HG02056.hp1 HG02135.hp2 HG02257.hp2 HG02735.hp2 HG03209.hp2 NA18747.hp1 NA18951.hp2 NA19000.hp1 NA19009.hp2 NA19030.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0001c0012	a0001c0001t0001 a0001c0004t0001 a0001c0005t0006 others(1): Show a0001c0001t0001 a0001c0004t0001 a0001c0005t0006 a0001c0012t0001	a0001c0001t0001g0077 a0001c0001t0001g0182 a0001c0001t0001g0186 others(9): Show a0001c0001t0001g0077 a0001c0001t0001g0182 a0001c0001t0001g0186 a0001c0001t0001g0199 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0274 a0001c0004t0001g0017 a0001c0005t0006g0338 a0001c0012t0001g0211	12	55	0.2182	12	c.332 others(31): Show c.332-10972_332-10961dupCACACACACACA	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGAP5_chr10_73669295_73703109	73669731	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0207 a0004c0004t0001g0207	1	323	0.0031	12	c.48 others(23): Show c.4867_*4868insTTTTTTTTTTTT	AGAP5	ENSG00000172650.15	transcript	ENST00000374094.9	protein_coding		4563		chr10	TogoVar
AGAP5_chr10_73669295_73703109	73669760	A A	AAAAAAAA others(5): Show AAAAAAAAAAAAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(107): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00639.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01261.hp2 HG01433.hp1 HG01496.hp1 HG01928.hp1 HG01928.hp2 HG02004.hp1 HG02055.hp1 HG02056.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02273.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG03017.hp1 HG03041.hp2 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18747.hp1 NA18939.hp2 NA18942.hp1 NA18944.hp2 NA18948.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp2 NA18957.hp2 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18991.hp1 NA18993.hp1 NA18999.hp2 NA19001.hp2 NA19003.hp2 NA19005.hp1 NA19006.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp1 NA19058.hp1 NA19075.hp2 NA19076.hp1 NA19081.hp1 NA19081.hp2 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20752.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0006 a0012 a0013	a0001c0001 a0001c0020 a0002c0002 others(5): Show a0001c0001 a0001c0020 a0002c0002 a0003c0003 a0005c0005 a0006c0010 a0012c0013 a0013c0021	a0001c0001t0001 a0001c0001t0004 a0001c0020t0001 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0020t0001 a0002c0002t0001 a0002c0002t0003 a0002c0002t0009 a0003c0003t0001 a0003c0003t0005 a0003c0003t0010 a0005c0005t0001 a0006c0010t0001 a0012c0013t0001 a0013c0021t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(78): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0064 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0150 a0001c0001t0004g0136 a0001c0020t0001g0132 a0002c0002t0001g0004 a0002c0002t0001g0013 a0002c0002t0001g0020 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0042 a0002c0002t0001g0161 a0002c0002t0001g0163 a0002c0002t0001g0166 a0002c0002t0001g0168 a0002c0002t0001g0172 a0002c0002t0001g0173 a0002c0002t0001g0176 a0002c0002t0001g0183 a0002c0002t0001g0184 a0002c0002t0001g0185 a0002c0002t0001g0187 a0002c0002t0001g0193 a0002c0002t0001g0195 a0002c0002t0001g0197 a0002c0002t0001g0199 a0002c0002t0001g0203 a0002c0002t0001g0208 a0002c0002t0003g0041 a0002c0002t0003g0188 a0002c0002t0003g0190 a0002c0002t0009g0212 a0003c0003t0001g0002 a0003c0003t0001g0006 a0003c0003t0001g0025 a0003c0003t0001g0026 a0003c0003t0001g0027 a0003c0003t0001g0028 a0003c0003t0001g0061 a0003c0003t0001g0070 a0003c0003t0001g0073 a0003c0003t0001g0074 a0003c0003t0001g0075 a0003c0003t0001g0079 a0003c0003t0001g0080 a0003c0003t0001g0085 a0003c0003t0001g0090 a0003c0003t0001g0094 a0003c0003t0001g0095 a0003c0003t0001g0102 a0003c0003t0005g0210 a0003c0003t0010g0213 a0005c0005t0001g0016 a0006c0010t0001g0069 a0012c0013t0001g0078 a0013c0021t0001g0152	110	207	0.5314	12	c.48 others(23): Show c.4838_*4839insGTTTTTTTTTTT	AGAP5	ENSG00000172650.15	transcript	ENST00000374094.9	protein_coding		4534		chr10	TogoVar
AGAP6_chr10_49983406_50015499	50007392	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01257.hp1 HG01257.hp2 others(7): Show HG00140.hp1 HG01257.hp1 HG01257.hp2 HG02717.hp1 HG02809.hp2 HG03834.hp2 NA18947.hp1 NA18970.hp1 NA18973.hp1 NA18975.hp1	a0001 a0003 a0021 a0001 a0003 a0021	a0001c0001 a0003c0003 a0021c0032 a0001c0001 a0003c0003 a0021c0032	a0001c0001t0001 a0003c0003t0003 a0003c0003t0009 others(1): Show a0001c0001t0001 a0003c0003t0003 a0003c0003t0009 a0021c0032t0004	a0001c0001t0001g0184 a0003c0003t0003g0020 a0003c0003t0003g0024 others(3): Show a0001c0001t0001g0184 a0003c0003t0003g0020 a0003c0003t0003g0024 a0003c0003t0003g0218 a0003c0003t0009g0024 a0021c0032t0004g0205	10	32	0.3125	12	c.534 others(27): Show c.534-618_534-607dupAAAAAAAAAAAA	AGAP6	ENSG00000204149.16	transcript	ENST00000412531.7	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr10	TogoVar

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