Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
AGBL4_chr1_48527854_50028954	48588656	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02451.hp2 HG02559.hp2 others(7): Show HG01943.hp2 HG02451.hp2 HG02559.hp2 HG02622.hp2 HG02647.hp2 HG02896.hp2 HG03041.hp1 HG03130.hp2 HG03209.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0007 a0001c0001 a0001c0004 a0001c0007	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0004t0003 a0001c0007t0003	a0001c0001t0003g0100 a0001c0001t0004g0065 a0001c0001t0004g0078 others(7): Show a0001c0001t0003g0100 a0001c0001t0004g0065 a0001c0001t0004g0078 a0001c0001t0005g0091 a0001c0004t0003g0016 a0001c0004t0003g0026 a0001c0004t0003g0051 a0001c0004t0003g0052 a0001c0004t0003g0057 a0001c0007t0003g0032	10	104	0.0962	12	c.110 others(31): Show c.1105-1502_1105-1491dupACACACACACAC		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	10/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48625090	C C	CTCCTTCC others(5): Show CTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02896.hp1 HG03453.hp1 others(2): Show HG02572.hp2 HG02896.hp1 HG03453.hp1 NA18522.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0003 a0002c0003t0007 a0001c0001t0002 a0001c0001t0003 a0002c0003t0007	a0001c0001t0002g0097 a0001c0001t0002g0099 a0001c0001t0003g0101 others(2): Show a0001c0001t0002g0097 a0001c0001t0002g0099 a0001c0001t0003g0101 a0001c0001t0003g0102 a0002c0003t0007g0061	5	104	0.0481	12	c.951 others(29): Show c.951+9391_951+9402dupAGGAAGGAAGGA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	9/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48646513	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02698.hp1 NA20129.hp2 HG02698.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0050 a0001c0002t0003g0074 a0001c0001t0001g0050 a0001c0002t0003g0074	2	104	0.0192	12	c.839 others(29): Show c.839+6812_839+6823dupCACACACACACA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	8/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48650444	A A	ACCTTCCT others(5): Show ACCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 NA18983.hp2 HG03130.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0042 a0001c0001t0016g0001 a0001c0001t0001g0042 a0001c0001t0016g0001	2	104	0.0192	12	c.839 others(29): Show c.839+2881_839+2892dupAAGGAAGGAAGG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	8/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48689219	A A	AAGAAAAG others(5): Show AAGAAAAGAAAAG	intron_variant intron_variant	MODIFIER	HG02630.hp2 NA20129.hp1 HG02630.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0068 a0001c0001t0001g0014 a0001c0001t0001g0068	2	104	0.0192	12	c.635 others(31): Show c.635-25979_635-25978insCTTTTCTTTTCT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48709584	C C	CATTATTA others(5): Show CATTATTATTATT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00609.hp2 HG01496.hp1 others(29): Show HG00609.hp1 HG00609.hp2 HG01496.hp1 HG01943.hp1 HG02055.hp2 HG02071.hp1 HG02155.hp2 HG02559.hp1 HG02647.hp1 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02896.hp1 HG02922.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03471.hp2 HG03492.hp1 HG03540.hp1 HG03831.hp2 HG04204.hp1 HG04204.hp2 NA18946.hp1 NA18946.hp2 NA18962.hp2 NA18971.hp2 NA19002.hp1 NA19068.hp1 NA19082.hp1 NA19082.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0002t0001 a0001c0002t0002 a0001c0002t0009 a0001c0004t0003 a0002c0003t0001 a0002c0003t0007 a0004c0006t0004	a0001c0001t0001g0008 a0001c0001t0001g0049 a0001c0001t0001g0053 others(29): Show a0001c0001t0001g0008 a0001c0001t0001g0049 a0001c0001t0001g0053 a0001c0001t0001g0067 a0001c0001t0001g0077 a0001c0001t0002g0082 a0001c0001t0003g0103 a0001c0001t0004g0041 a0001c0001t0004g0081 a0001c0001t0004g0104 a0001c0001t0005g0028 a0001c0001t0006g0024 a0001c0001t0006g0045 a0001c0001t0006g0069 a0001c0001t0008g0047 a0001c0001t0010g0027 a0001c0001t0011g0010 a0001c0001t0011g0096 a0001c0001t0012g0054 a0001c0001t0012g0055 a0001c0001t0016g0001 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0002g0019 a0001c0002t0009g0004 a0001c0002t0009g0034 a0001c0004t0003g0026 a0002c0003t0001g0013 a0002c0003t0001g0015 a0002c0003t0001g0059 a0002c0003t0007g0061 a0004c0006t0004g0071	32	104	0.3077	12	c.635 others(31): Show c.635-46355_635-46344dupAATAATAATAAT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48762614	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	104	0.0096	12	c.635 others(31): Show c.635-99385_635-99374dupCACACACACACA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48769526	A A	AACACACA others(5): Show AACACACACACAC	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp2 HG02559.hp2 others(3): Show HG02055.hp1 HG02055.hp2 HG02559.hp2 HG03130.hp1 HG03195.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0016	a0001c0001t0002g0044 a0001c0001t0003g0092 a0001c0001t0003g0100 others(3): Show a0001c0001t0002g0044 a0001c0001t0003g0092 a0001c0001t0003g0100 a0001c0001t0005g0093 a0001c0001t0008g0047 a0001c0001t0016g0001	6	104	0.0577	12	c.634 others(31): Show c.634+97653_634+97664dupGTGTGTGTGTGT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48837711	C C	CTATATAT others(5): Show CTATATATATATA	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02622.hp2 HG03453.hp1 others(5): Show HG02559.hp1 HG02622.hp2 HG03453.hp1 HG03471.hp1 HG03710.hp1 NA18522.hp2 NA18962.hp2 NA19068.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0004t0003 a0004c0006t0004	a0001c0001t0001g0030 a0001c0001t0001g0087 a0001c0001t0002g0097 others(5): Show a0001c0001t0001g0030 a0001c0001t0001g0087 a0001c0001t0002g0097 a0001c0001t0006g0024 a0001c0001t0007g0085 a0001c0002t0001g0035 a0001c0004t0003g0057 a0004c0006t0004g0071	8	104	0.0769	12	c.634 others(31): Show c.634+29468_634+29479dupTATATATATATA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48846362	G G	GAAGAAAG others(5): Show GAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0039 a0001c0001t0009g0039	1	104	0.0096	12	c.634 others(31): Show c.634+20817_634+20828dupTCTTTCTTTCTT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	6/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48871353	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG03209.hp2 HG03710.hp2 others(1): Show HG02055.hp2 HG03209.hp2 HG03710.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008	a0001c0001t0001g0012 a0001c0001t0003g0092 a0001c0001t0005g0066 others(1): Show a0001c0001t0001g0012 a0001c0001t0003g0092 a0001c0001t0005g0066 a0001c0001t0008g0047	4	104	0.0385	12	c.595 others(29): Show c.595-4135_595-4124dupCACACACACACA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48961080	G G	GGTGTGTG others(5): Show GGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	104	0.0096	12	c.594 others(31): Show c.594+84492_594+84503dupACACACACACAC		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48962096	C C	CCCATCCA others(5): Show CCCATCCATCCAT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG03540.hp2 NA18522.hp1 HG02572.hp2 HG03540.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0018 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0002g0018 a0001c0001t0003g0101 a0001c0001t0003g0102	3	104	0.0289	12	c.594 others(31): Show c.594+83476_594+83487dupATGGATGGATGG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48962135	A A	ATCCATCC others(5): Show ATCCATCCATCCG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02630.hp1 HG02572.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0022 a0001c0001t0007g0021 a0001c0001t0002g0022 a0001c0001t0007g0021	2	104	0.0192	12	c.594 others(31): Show c.594+83448_594+83449insCGGATGGATGGA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	48996817	C C	CCCTTCCT others(5): Show CCCTTCCTTCCTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00639.hp2 HG02717.hp2 others(5): Show HG00609.hp2 HG00639.hp2 HG02717.hp2 NA18946.hp1 NA18977.hp2 NA18983.hp1 NA19002.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0009	a0001c0001t0001g0011 a0001c0001t0001g0053 a0001c0001t0001g0089 others(5): Show a0001c0001t0001g0011 a0001c0001t0001g0053 a0001c0001t0001g0089 a0001c0002t0001g0035 a0001c0002t0002g0002 a0001c0002t0002g0003 a0001c0002t0002g0005 a0001c0002t0009g0034	8	104	0.0769	12	c.594 others(31): Show c.594+48755_594+48766dupAAGGAAGGAAGG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	5/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49107690	T T	TGAGAGAG others(5): Show TGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0100 a0001c0001t0003g0100	1	104	0.0096	12	c.378 others(31): Show c.378-61891_378-61890insTCTCTCTCTCTC		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49107692	T T	TGAGAGAG others(5): Show TGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0093 a0001c0001t0005g0093	1	104	0.0096	12	c.378 others(31): Show c.378-61893_378-61892insTCTCTCTCTCTC		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49107694	T T	TGTGAGAG others(5): Show TGTGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	104	0.0096	12	c.378 others(31): Show c.378-61895_378-61894insTCTCTCTCTCAC		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49207541	C C	CCTTTCTT others(5): Show CCTTTCTTTCTTT	intron_variant intron_variant	MODIFIER	NA18946.hp1 NA18946.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	104	0.0096	12	c.377 others(31): Show c.377+38228_377+38229insAAAGAAAGAAAG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49207542	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00639.hp2 HG01167.hp1 others(15): Show HG00609.hp2 HG00639.hp2 HG01167.hp1 HG01243.hp1 HG01496.hp1 HG02622.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG03130.hp1 HG03471.hp1 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03710.hp2 NA18962.hp2 NA18983.hp1 NA19043.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0012 a0001c0001t0016 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0009 a0002c0003t0005 a0003c0005t0001	a0001c0001t0001g0011 a0001c0001t0001g0077 a0001c0001t0001g0087 others(15): Show a0001c0001t0001g0011 a0001c0001t0001g0077 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0002g0018 a0001c0001t0003g0092 a0001c0001t0004g0065 a0001c0001t0004g0072 a0001c0001t0006g0024 a0001c0001t0012g0055 a0001c0001t0016g0001 a0001c0002t0002g0003 a0001c0002t0003g0074 a0001c0002t0004g0076 a0001c0002t0006g0037 a0001c0002t0009g0034 a0002c0003t0005g0017 a0003c0005t0001g0060	18	104	0.1731	12	c.377 others(31): Show c.377+38216_377+38227dupGAAAGAAAGAAA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	4/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49303451	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	104	0.0096	12	c.283 others(31): Show c.283-57599_283-57588dupTAAATAAATAAA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49371248	G G	GATAGATA others(5): Show GATAGATAGATAC	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	104	0.0096	12	c.283 others(33): Show c.283-125385_283-125384insGTATCTATCTAT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49568487	T T	TCACACAC others(5): Show TCACACACACACA	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01167.hp1 HG01943.hp2 others(6): Show HG01071.hp2 HG01167.hp1 HG01943.hp2 HG02004.hp2 HG02055.hp1 HG03540.hp2 NA18522.hp2 NA18977.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0002t0004 a0002c0003t0008	a0001c0001t0001g0079 a0001c0001t0002g0018 a0001c0001t0002g0075 others(6): Show a0001c0001t0001g0079 a0001c0001t0002g0018 a0001c0001t0002g0075 a0001c0001t0004g0095 a0001c0001t0005g0091 a0001c0001t0005g0093 a0001c0001t0007g0085 a0001c0002t0004g0076 a0002c0003t0008g0088	9	104	0.0865	12	c.282 others(33): Show c.282+128814_282+128825dupTGTGTGTGTGTG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49674571	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0013 a0002c0003t0001g0013	1	104	0.0096	12	c.282 others(31): Show c.282+22730_282+22741dupGTGTGTGTGTGT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	3/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49714569	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0096 a0001c0001t0011g0096	1	104	0.0096	12	c.158 others(31): Show c.158-17144_158-17133dupATATATATATAT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	2/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49714593	T T	TATATATA others(5): Show TATATATATATAC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0102 a0001c0001t0003g0102	1	104	0.0096	12	c.158 others(31): Show c.158-17157_158-17156insGTATATATATAT		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	2/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49823778	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03209.hp2 NA19082.hp1 HG03209.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0012 a0001c0002t0002g0019 a0001c0001t0001g0012 a0001c0002t0002g0019	2	104	0.0192	12	c.157 others(31): Show c.157+27606_157+27617dupCACACACACACA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	2/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49906116	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03453.hp2 HG02572.hp1 HG03453.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0009 a0001c0001 a0004c0009	a0001c0001t0002 a0004c0009t0004 a0001c0001t0002 a0004c0009t0004	a0001c0001t0002g0022 a0004c0009t0004g0020 a0001c0001t0002g0022 a0004c0009t0004g0020	2	104	0.0192	12	c.35- others(29): Show c.35-54610_35-54599dupCACACACACACA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49971907	G G	GTTGTTTT others(5): Show GTTGTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG01071.hp1 HG01243.hp1 others(3): Show HG00609.hp2 HG01071.hp1 HG01243.hp1 HG02698.hp1 HG03831.hp2 NA18977.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0002 a0001c0002t0003 others(1): Show a0001c0001t0004 a0001c0002t0002 a0001c0002t0003 a0001c0002t0009	a0001c0001t0004g0072 a0001c0002t0002g0005 a0001c0002t0003g0073 others(3): Show a0001c0001t0004g0072 a0001c0002t0002g0005 a0001c0002t0003g0073 a0001c0002t0003g0074 a0001c0002t0009g0004 a0001c0002t0009g0034	6	104	0.0577	12	c.34+ others(29): Show c.34+51855_34+51856insAAAAAAAAACAA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	49971907	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02572.hp1 HG02630.hp1 others(2): Show HG02071.hp1 HG02572.hp1 HG02630.hp1 NA18962.hp2 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007	a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0006g0024 others(2): Show a0001c0001t0002g0022 a0001c0001t0002g0029 a0001c0001t0006g0024 a0001c0001t0006g0069 a0001c0001t0007g0021	5	104	0.0481	12	c.34+ others(29): Show c.34+51844_34+51855dupAAAAAAAAAAAA		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	50019306	T T	TCACACAC others(5): Show TCACACACACACA	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0033 a0001c0002t0001g0033	1	104	0.0096	12	c.34+ others(27): Show c.34+4445_34+4456dupTGTGTGTGTGTG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13						chr1	TogoVar
AGBL4_chr1_48527854_50028954	50019306	T T	TCTCTCTC others(5): Show TCTCTCTCACACA	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG03195.hp2 NA18906.hp2 others(2): Show HG00609.hp1 HG03195.hp2 NA18906.hp2 NA18970.hp1 NA18983.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0001c0001t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0001g0008 a0001c0001t0001g0042 a0001c0001t0001g0043 others(2): Show a0001c0001t0001g0008 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0002g0044 a0002c0003t0001g0009	5	104	0.0481	12	c.34+ others(27): Show c.34+4456_34+4457insTGTGTGAGAGAG		AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13						chr1	TogoVar
AGFG2_chr7_100534203_100573220	100551030	T T	TTATATAT others(5): Show TTATATATATATA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01081.hp1 NA19011.hp1 others(1): Show HG00642.hp2 HG01081.hp1 NA19011.hp1 NA19074.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0004c0004t0002 a0001c0001t0001 a0001c0001t0002 a0004c0004t0002	a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0002g0129 others(1): Show a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0002g0129 a0004c0004t0002g0075	4	246	0.0163	12	c.431 others(27): Show c.431+545_431+556dupATATATATATAT		AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr7	TogoVar
AGGF1_chr5_77025404_77070234	77030783	C C	CGTCCCCG others(5): Show CGTCCCCGCCGCG	disruptive_inframe_insertion disruptive_inframe_insertion	MODERATE	HG02698.hp1 HG02698.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0004 a0006c0006t0004	a0006c0006t0004g0115 a0006c0006t0004g0115	1	438	0.0023	12	c.21_ others(17): Show c.21_32dupCCCGCCGCGGTC	p.Ser others(23): Show p.Ser11_Pro12insProProArgSer	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	1/14	396/4490	33/2145	11/714		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGK_chr7_141546410_141660244	141602172	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02258.hp1 HG02630.hp1 others(6): Show HG01952.hp2 HG02258.hp1 HG02630.hp1 HG02723.hp1 HG02818.hp2 HG02922.hp2 HG03579.hp2 HG03704.hp2 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0003c0003t0010	a0001c0001t0001g0228 a0001c0001t0002g0229 a0001c0001t0002g0231 others(6): Show a0001c0001t0001g0228 a0001c0001t0002g0229 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0236 a0001c0001t0003g0266 a0001c0001t0004g0255 a0001c0001t0005g0260 a0003c0003t0010g0227	9	274	0.0329	12	c.297 others(27): Show c.297+892_297+893insGTGTGTGTGTGT		AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15						chr7	TogoVar
AGK_chr7_141546410_141660244	141602173	T T	TTGTGTGT others(5): Show TTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03516.hp1 HG03579.hp1 others(1): Show HG02109.hp2 HG03516.hp1 HG03579.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0022 a0001c0001t0001g0052 a0001c0001t0001g0058 others(1): Show a0001c0001t0001g0022 a0001c0001t0001g0052 a0001c0001t0001g0058 a0001c0001t0006g0225	4	274	0.0146	12	c.297 others(27): Show c.297+921_297+932dupGTGTGTGTGTGT		AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15					INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141604374	G G	GTATATAT others(5): Show GTATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02148.hp1 HG02559.hp1 others(5): Show HG00735.hp1 HG02148.hp1 HG02559.hp1 HG02735.hp2 HG02895.hp1 HG02897.hp2 NA18955.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0018 a0001c0001t0001g0043 a0001c0001t0001g0063 others(5): Show a0001c0001t0001g0018 a0001c0001t0001g0043 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0115 a0001c0001t0008g0033 a0001c0001t0008g0034	8	274	0.0292	12	c.297 others(29): Show c.297+3113_297+3124dupTATATATATATA		AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15					INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141604374	G G	GTGTATAT others(5): Show GTGTATATATATA	intron_variant intron_variant	MODIFIER	HG02970.hp2 NA18981.hp2 HG02970.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0097 a0001c0001t0001g0252 a0001c0001t0001g0097 a0001c0001t0001g0252	2	274	0.0073	12	c.297 others(29): Show c.297+3095_297+3096insGTATATATATAT		AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15					INFO_REALIGN_3_PRIME	chr7	TogoVar
AGL_chr1_99845361_99929020	99866800	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0186 a0003c0006t0001g0186	1	318	0.0031	12	c.664 others(29): Show c.664+2215_664+2226dupATTTATTTATTT		AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99866800	T T	TTTTCTTT others(5): Show TTTTCTTTATTTA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00438.hp1 others(120): Show HG00408.hp1 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG00741.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01981.hp2 HG02040.hp2 HG02055.hp2 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp2 HG02622.hp2 HG02630.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp2 HG02886.hp1 HG02976.hp1 HG03017.hp2 HG03130.hp1 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03654.hp2 HG03688.hp2 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18939.hp1 NA18944.hp2 NA18945.hp1 NA18948.hp2 NA18949.hp2 NA18951.hp2 NA18952.hp1 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp1 NA18967.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18980.hp1 NA18981.hp1 NA18983.hp2 NA18989.hp2 NA18994.hp1 NA19003.hp2 NA19004.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19030.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19091.hp1 NA20300.hp1 NA20752.hp1 NA20905.hp1 NA21309.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0011 a0023 a0024 a0025	a0001c0001 a0001c0014 a0002c0007 others(9): Show a0001c0001 a0001c0014 a0002c0007 a0003c0006 a0004c0005 a0005c0004 a0006c0008 a0007c0024 a0011c0011 a0023c0016 a0024c0034 a0025c0035	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(17): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0011 a0001c0001t0017 a0001c0014t0016 a0002c0007t0002 a0003c0006t0001 a0003c0006t0008 a0003c0006t0019 a0004c0005t0002 a0004c0005t0003 a0005c0004t0003 a0005c0004t0015 a0006c0008t0007 a0007c0024t0015 a0011c0011t0014 a0023c0016t0023 a0024c0034t0005 a0025c0035t0001	a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0008 others(111): Show a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0106 a0001c0001t0002g0108 a0001c0001t0002g0111 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0297 a0001c0001t0003g0012 a0001c0001t0003g0115 a0001c0001t0003g0121 a0001c0001t0003g0126 a0001c0001t0003g0156 a0001c0001t0003g0172 a0001c0001t0003g0232 a0001c0001t0003g0235 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0239 a0001c0001t0003g0243 a0001c0001t0007g0207 a0001c0001t0007g0229 a0001c0001t0007g0231 a0001c0001t0007g0233 a0001c0001t0007g0234 a0001c0001t0007g0240 a0001c0001t0011g0112 a0001c0001t0011g0176 a0001c0001t0017g0129 a0001c0001t0017g0130 a0001c0014t0016g0127 a0001c0014t0016g0157 a0002c0007t0002g0003 a0002c0007t0002g0146 a0002c0007t0002g0147 a0002c0007t0002g0148 a0003c0006t0001g0177 a0003c0006t0001g0178 a0003c0006t0001g0179 a0003c0006t0001g0180 a0003c0006t0001g0181 a0003c0006t0001g0182 a0003c0006t0001g0183 a0003c0006t0001g0184 a0003c0006t0001g0185 a0003c0006t0001g0189 a0003c0006t0001g0190 a0003c0006t0001g0192 a0003c0006t0001g0200 a0003c0006t0001g0201 a0003c0006t0008g0191 a0003c0006t0019g0188 a0004c0005t0002g0107 a0004c0005t0002g0109 a0004c0005t0002g0110 a0004c0005t0002g0113 a0004c0005t0002g0114 a0004c0005t0002g0122 a0004c0005t0002g0123 a0004c0005t0002g0124 a0004c0005t0002g0125 a0004c0005t0002g0141 a0004c0005t0002g0154 a0004c0005t0002g0158 a0004c0005t0002g0162 a0004c0005t0002g0164 a0004c0005t0002g0167 a0004c0005t0002g0171 a0004c0005t0002g0173 a0004c0005t0003g0119 a0004c0005t0003g0165 a0004c0005t0003g0166 a0005c0004t0003g0242 a0005c0004t0015g0168 a0006c0008t0007g0230 a0006c0008t0007g0241 a0007c0024t0015g0236 a0011c0011t0014g0204 a0011c0011t0014g0247 a0023c0016t0023g0205 a0024c0034t0005g0198 a0025c0035t0001g0187	123	318	0.3868	12	c.664 others(29): Show c.664+2214_664+2215insCTTTATTTATTT		AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99866800	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01257.hp2 HG01258.hp1 others(27): Show HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG02027.hp1 HG02055.hp1 HG02109.hp2 HG02132.hp1 HG02165.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02622.hp1 HG02717.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG03098.hp2 HG03130.hp2 HG03225.hp2 HG03942.hp2 HG04199.hp1 NA18522.hp1 NA18942.hp1 NA18962.hp1 NA18963.hp2 NA19030.hp1 NA19064.hp2	a0001 a0003 a0006 others(3): Show a0001 a0003 a0006 a0008 a0016 a0017	a0001c0001 a0003c0006 a0003c0015 others(4): Show a0001c0001 a0003c0006 a0003c0015 a0006c0008 a0008c0010 a0016c0028 a0017c0027	a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 others(8): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0011 a0003c0006t0001 a0003c0006t0006 a0003c0015t0012 a0006c0008t0008 a0008c0010t0010 a0016c0028t0002 a0017c0027t0013	a0001c0001t0003g0011 a0001c0001t0003g0217 a0001c0001t0003g0218 others(26): Show a0001c0001t0003g0011 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0248 a0001c0001t0006g0206 a0001c0001t0009g0104 a0001c0001t0009g0105 a0001c0001t0011g0228 a0003c0006t0001g0195 a0003c0006t0001g0196 a0003c0006t0006g0193 a0003c0006t0006g0194 a0003c0015t0012g0197 a0003c0015t0012g0199 a0006c0008t0008g0203 a0008c0010t0010g0208 a0008c0010t0010g0209 a0008c0010t0010g0210 a0016c0028t0002g0249 a0017c0027t0013g0202	30	318	0.0943	12	c.664 others(29): Show c.664+2214_664+2215insCTTTCTTTATTT		AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99866800	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00741.hp2 others(69): Show HG00140.hp1 HG00140.hp2 HG00741.hp2 HG01109.hp2 HG01256.hp1 HG01361.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01981.hp1 HG02004.hp1 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02258.hp1 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18939.hp2 NA18945.hp2 NA18947.hp2 NA18949.hp1 NA18951.hp1 NA18956.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18999.hp1 NA19005.hp1 NA19010.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19066.hp1 NA19072.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp1	a0001 a0002 a0005 others(8): Show a0001 a0002 a0005 a0006 a0009 a0013 a0014 a0018 a0020 a0021 a0022	a0001c0001 a0001c0031 a0002c0007 others(9): Show a0001c0001 a0001c0031 a0002c0007 a0005c0004 a0006c0008 a0009c0032 a0013c0033 a0014c0030 a0018c0026 a0020c0029 a0021c0025 a0022c0023	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(12): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0031t0006 a0002c0007t0005 a0002c0007t0006 a0005c0004t0004 a0006c0008t0008 a0009c0032t0004 a0013c0033t0004 a0014c0030t0006 a0018c0026t0009 a0020c0029t0013 a0021c0025t0001 a0022c0023t0004	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0010 others(62): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0259 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0005g0252 a0001c0001t0008g0260 a0001c0031t0006g0246 a0002c0007t0005g0279 a0002c0007t0005g0287 a0002c0007t0005g0290 a0002c0007t0006g0269 a0005c0004t0004g0013 a0005c0004t0004g0014 a0005c0004t0004g0015 a0005c0004t0004g0250 a0005c0004t0004g0251 a0005c0004t0004g0253 a0005c0004t0004g0254 a0005c0004t0004g0255 a0005c0004t0004g0256 a0005c0004t0004g0257 a0005c0004t0004g0258 a0005c0004t0004g0261 a0005c0004t0004g0262 a0005c0004t0004g0263 a0005c0004t0004g0264 a0005c0004t0004g0265 a0005c0004t0004g0266 a0005c0004t0004g0267 a0005c0004t0004g0268 a0006c0008t0008g0016 a0009c0032t0004g0216 a0013c0033t0004g0014 a0014c0030t0006g0274 a0018c0026t0009g0211 a0020c0029t0013g0214 a0021c0025t0001g0296 a0022c0023t0004g0015	72	318	0.2264	12	c.664 others(29): Show c.664+2214_664+2215insCTTTCTTTCTTT		AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99907680	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0016 a0001c0014t0016	a0001c0014t0016g0127 a0001c0014t0016g0127	1	318	0.0031	12	c.370 others(31): Show c.3701-3027_3701-3026insTTTTTTTTTTTT		AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	27/33					INFO_REALIGN_3_PRIME	chr1	TogoVar
AGMAT_chr1_15566699_15590051	15576740	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00639.hp2 others(27): Show HG00099.hp2 HG00280.hp1 HG00639.hp2 HG01070.hp1 HG01257.hp1 HG01934.hp2 HG02109.hp2 HG02622.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG03225.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp2 HG04204.hp2 NA18941.hp1 NA18978.hp2 NA18984.hp1 NA18990.hp2 NA18994.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19074.hp1 NA19082.hp1 NA19088.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0001 a0003c0005 a0001c0002 a0002c0001 a0003c0005	a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 others(9): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 a0001c0002t0009 a0001c0002t0027 a0001c0002t0073 a0002c0001t0001 a0002c0001t0003 a0002c0001t0008 a0002c0001t0018 a0002c0001t0040 a0003c0005t0028	a0001c0002t0002g0141 a0001c0002t0002g0174 a0001c0002t0004g0173 others(21): Show a0001c0002t0002g0141 a0001c0002t0002g0174 a0001c0002t0004g0173 a0001c0002t0007g0139 a0001c0002t0009g0140 a0001c0002t0027g0176 a0001c0002t0073g0175 a0002c0001t0001g0012 a0002c0001t0001g0041 a0002c0001t0001g0042 a0002c0001t0001g0220 a0002c0001t0001g0221 a0002c0001t0001g0251 a0002c0001t0001g0265 a0002c0001t0001g0266 a0002c0001t0001g0275 a0002c0001t0001g0276 a0002c0001t0003g0049 a0002c0001t0003g0205 a0002c0001t0003g0213 a0002c0001t0008g0250 a0002c0001t0018g0249 a0002c0001t0040g0252 a0003c0005t0028g0072	30	390	0.0769	12	c.900 others(27): Show c.900+933_900+944dupAAAAAAAAAAAA		AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding	5/6						chr1	TogoVar
AGMAT_chr1_15566699_15590051	15586050	A A	AAAATAAA others(5): Show AAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp1 NA18966.hp2 HG04115.hp1 NA18966.hp2	a0002 a0003 a0002 a0003	a0002c0001 a0003c0004 a0002c0001 a0003c0004	a0002c0001t0001 a0003c0004t0006 a0002c0001t0001 a0003c0004t0006	a0002c0001t0001g0002 a0003c0004t0006g0030 a0002c0001t0001g0002 a0003c0004t0006g0030	2	390	0.0051	12	c.-10 others(23): Show c.-1095_-1084dupATTTATTTATTT		AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding					1000		chr1	TogoVar
AGMO_chr7_15195317_15567015	15198196	C C	CGAGAGAG others(5): Show CGAGAGAGAGAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02027.hp1 NA18946.hp2 HG02027.hp1 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0122 a0001c0001t0002g0131 a0001c0001t0001g0122 a0001c0001t0002g0131	2	236	0.0085	12	c.30 others(23): Show c.3088_*3089insTCTCTCTCTCTC		AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding					2120		chr7	TogoVar
AGMO_chr7_15195317_15567015	15198251	G G	GAGAGAGA others(5): Show GAGAGAGAGAGAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0172 a0002c0002t0002g0172	1	236	0.0042	12	c.30 others(23): Show c.3033_*3034insGTCTCTCTCTCT		AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding					2065		chr7	TogoVar
AGMO_chr7_15195317_15567015	15216833	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG03041.hp2 HG02735.hp1 HG03041.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0003c0006t0001 a0001c0001t0001 a0003c0006t0001	a0001c0001t0001g0073 a0003c0006t0001g0181 a0001c0001t0001g0073 a0003c0006t0001g0181	2	236	0.0085	12	c.126 others(33): Show c.1264-15486_1264-15475dupACACACACACAC		AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12						chr7	TogoVar
AGMO_chr7_15195317_15567015	15218327	A A	ATGTGTGT others(5): Show ATGTGTGTATGTG	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0050 a0001c0011t0001g0050	1	236	0.0042	12	c.126 others(33): Show c.1264-16969_1264-16968insCACATACACACA		AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12						chr7	TogoVar
AGMO_chr7_15195317_15567015	15218327	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0068 a0001c0003t0001g0068	1	236	0.0042	12	c.126 others(33): Show c.1264-16980_1264-16969dupCACACACACACA		AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12						chr7	TogoVar

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