Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
APELA_chr4_164872178_164902527	164884121	G G	GAGAAAGA others(5): Show GAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01070.hp1 HG01891.hp1 others(16): Show HG00558.hp2 HG01070.hp1 HG01891.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02300.hp1 HG02559.hp2 HG02647.hp2 HG03927.hp2 NA18945.hp2 NA18975.hp2 NA18991.hp1 NA18994.hp1 NA18998.hp1 NA19000.hp2 NA19054.hp2 NA19055.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004	a0001c0002t0001g0002 a0001c0002t0001g0018 a0001c0002t0001g0130 others(7): Show a0001c0002t0001g0002 a0001c0002t0001g0018 a0001c0002t0001g0130 a0001c0002t0001g0133 a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0001g0152 a0001c0002t0001g0187 a0001c0002t0002g0151 a0001c0002t0004g0192	19	434	0.0438	12	c.1+ others(27): Show c.1+5139_*1+5150dupAAAGAAAGAAAG	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
APELA_chr4_164872178_164902527	164893661	C C	CTTTTTCC others(5): Show CTTTTTCCATCCT	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0217	1	434	0.0023	12	c.2- others(27): Show c.2-1752_*2-1741dupTTTCCATCCTTT	APELA	ENSG00000248329.6	transcript	ENST00000507152.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
APLF_chr2_68462585_68585162	68525742	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02145.hp2 others(9): Show HG01884.hp2 HG01891.hp2 HG02145.hp2 HG02257.hp2 HG02630.hp1 HG02809.hp1 HG02886.hp1 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG03041.hp1 NA20129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0038 others(9): Show a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0038 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0044 a0002c0002t0002g0046 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0050 a0002c0002t0002g0052 a0002c0002t0002g0053	12	176	0.0682	12	c.623 others(27): Show c.623-305_623-294dupTTTTTTTTTTTT	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68565508	C C	CAGATAGA others(5): Show CAGATAGATAGAT	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG02109.hp1 HG02486.hp1	a0002 a0008 a0002 a0008	a0002c0002 a0008c0008 a0002c0002 a0008c0008	a0002c0002t0006 a0008c0008t0006 a0002c0002t0006 a0008c0008t0006	a0002c0002t0006g0163 a0008c0008t0006g0026 a0002c0002t0006g0163 a0008c0008t0006g0026	2	176	0.0114	12	c.128 others(31): Show c.1287-1824_1287-1823insGATAGATAGATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68565514	G G	GATACATA others(5): Show GATACATACATAC	intron_variant intron_variant	MODIFIER	HG02622.hp1 NA20300.hp1 HG02622.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0161 a0002c0002t0006g0164 a0002c0002t0006g0161 a0002c0002t0006g0164	2	176	0.0114	12	c.128 others(31): Show c.1287-1795_1287-1784dupCATACATACATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLF_chr2_68462585_68585162	68565514	G G	GATAGATA others(5): Show GATAGATAGATAC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01243.hp1 HG02257.hp1 others(4): Show HG00738.hp1 HG01243.hp1 HG02257.hp1 HG02886.hp1 HG02970.hp1 NA18906.hp1 NA21309.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0003c0003t0004 a0003c0003t0005 a0002c0002t0002 a0003c0003t0004 a0003c0003t0005	a0002c0002t0002g0044 a0002c0002t0002g0045 a0003c0003t0004g0120 others(4): Show a0002c0002t0002g0044 a0002c0002t0002g0045 a0003c0003t0004g0120 a0003c0003t0004g0122 a0003c0003t0004g0126 a0003c0003t0005g0130 a0003c0003t0005g0133	7	176	0.0398	12	c.128 others(31): Show c.1287-1824_1287-1823insGATAGATACATA	APLF	ENSG00000169621.11	transcript	ENST00000303795.9	protein_coding	8/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
APLNR_chr11_57228591_57242250	57233211	G G	GTGGATGG others(5): Show GTGGATGGATGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp2 HG03704.hp1 NA20129.hp1 HG01981.hp2 HG03704.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0000 a0001c0001t0007g0000 a0001c0001t0003g0000 a0001c0001t0007g0000	3	430	0.0070	12	c.26 others(23): Show c.2650_*2651insTCCATCCATCCA	APLNR	ENSG00000134817.12	transcript	ENST00000606794.2	protein_coding		379		chr11	TogoVar
APLNR_chr11_57228591_57242250	57239109	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02148.hp2 HG02818.hp1 homoSapiens_chm13v2.hp1 HG02148.hp2 HG02818.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0007 a0001c0002t0002 a0001c0002t0007	a0001c0002t0002g0000 a0001c0002t0007g0000 a0001c0002t0002g0000 a0001c0002t0007g0000	3	430	0.0070	12	c.-21 others(23): Show c.-2106_-2105insTTTTTTTTTTTT	APLNR	ENSG00000134817.12	transcript	ENST00000606794.2	protein_coding		1860		chr11	TogoVar
APLP1_chr19_35863574_35884792	35864176	T T	TTTGTTGT others(5): Show TTTGTTGTTGTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18967.hp2 NA20905.hp2 NA18967.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	256	0.0078	12	c.-44 others(23): Show c.-4461_-4460insTTGTTGTTGTTG	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		4397		chr19	TogoVar
APLP1_chr19_35863574_35884792	35882172	A A	AAAATAAA others(5): Show AAAATAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	256	0.0039	12	c.27 others(23): Show c.2731_*2732insAAATAAATAAAT	APLP1	ENSG00000105290.13	transcript	ENST00000221891.9	protein_coding		2381		chr19	TogoVar
APLP2_chr11_130064894_130149805	130079079	T T	TTTTATTT others(5): Show TTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp1 NA20300.hp1 HG02647.hp2 HG03130.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0135 a0001c0001t0001g0147 a0001c0001t0001g0148	3	274	0.0110	12	c.105 others(29): Show c.105+9000_105+9001insATTTATTTATTT	APLP2	ENSG00000084234.18	transcript	ENST00000338167.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
APLP2_chr11_130064894_130149805	130092702	G G	GGAGGGAG others(5): Show GGAGGGAGAGAGA	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02015.hp2 HG02056.hp2 others(2): Show HG00544.hp1 HG02015.hp2 HG02056.hp2 HG04184.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0153 a0001c0001t0001g0165 a0001c0001t0001g0168 others(2): Show a0001c0001t0001g0153 a0001c0001t0001g0165 a0001c0001t0001g0168 a0001c0001t0001g0171 a0001c0001t0001g0180	5	274	0.0183	12	c.106 others(31): Show c.106-16726_106-16725insAGGGAGAGAGAG	APLP2	ENSG00000084234.18	transcript	ENST00000338167.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOA1_chr11_116830751_116842622	116831189	A A	ATTTCTTT others(5): Show ATTTCTTTCTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	448	0.0022	12	c.46 others(23): Show c.4607_*4618dupGAAAGAAAGAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4561		chr11	TogoVar
APOA1_chr11_116830751_116842622	116831285	T T	TTTCTTTC others(5): Show TTTCTTTCTTTTC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 NA19084.hp2 HG02523.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	448	0.0045	12	c.45 others(23): Show c.4522_*4523insGAAAAGAAAGAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4465		chr11	TogoVar
APOA1_chr11_116830751_116842622	116832485	C C	CGTGTAAT others(5): Show CGTGTAATTTGTT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	448	0.0022	12	c.33 others(23): Show c.3322_*3323insAACAAATTACAC	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		3265		chr11	TogoVar
APOA1_chr11_116830751_116842622	116842618	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 NA18906.hp1 HG02145.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	2	448	0.0045	12	c.-50 others(23): Show c.-5035_-5034insAAAAAAAAAAAA	APOA1	ENSG00000118137.10	transcript	ENST00000236850.5	protein_coding		4997		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818348	T T	TTATATAT others(5): Show TTATATATGAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp1 HG00597.hp1 HG00597.hp2 others(73): Show HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp2 HG01074.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01243.hp1 HG01496.hp1 HG01891.hp1 HG01993.hp2 HG02071.hp1 HG02132.hp1 HG02155.hp2 HG02258.hp1 HG02280.hp1 HG02523.hp2 HG02723.hp2 HG02809.hp2 HG02965.hp2 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03239.hp1 HG03453.hp2 HG03579.hp1 HG03704.hp2 HG03834.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp2 NA18906.hp2 NA18948.hp1 NA18949.hp1 NA18953.hp2 NA18955.hp1 NA18959.hp2 NA18964.hp1 NA18965.hp1 NA18967.hp2 NA18971.hp2 NA18972.hp1 NA18973.hp2 NA18975.hp2 NA18977.hp2 NA18978.hp2 NA18980.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18989.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19004.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp2	a0001 a0010 a0014 a0001 a0010 a0014	a0001c0001 a0001c0005 a0001c0018 others(3): Show a0001c0001 a0001c0005 a0001c0018 a0001c0023 a0010c0016 a0014c0013	a0001c0001t0001 a0001c0005t0001 a0001c0018t0001 others(3): Show a0001c0001t0001 a0001c0005t0001 a0001c0018t0001 a0001c0023t0001 a0010c0016t0001 a0014c0013t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(6): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0005t0001g0006 a0001c0018t0001g0021 a0001c0023t0001g0037 a0010c0016t0001g0031 a0014c0013t0001g0020	76	462	0.1645	12	c.25 others(23): Show c.2518_*2519insTATTCATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2351		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818369	A A	AATATATA others(5): Show AATATATATGAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0010 a0010	a0010c0016 a0010c0016	a0010c0016t0001 a0010c0016t0001	a0010c0016t0001g0031 a0010c0016t0001g0031	1	462	0.0022	12	c.24 others(23): Show c.2497_*2498insATTCATATATAT	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2330		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818425	A A	AATATATA others(5): Show AATATATATGAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG02257.hp2 HG02615.hp2 others(7): Show HG01074.hp1 HG02257.hp2 HG02615.hp2 HG02818.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03225.hp1 HG03579.hp2 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0005 a0001c0003t0001g0005	10	462	0.0217	12	c.24 others(23): Show c.2441_*2442insATTCATATATAT	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2274		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818526	T T	TTATATAT others(5): Show TTATATATGAATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp2 HG00621.hp1 others(89): Show HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00673.hp2 HG01074.hp1 HG01081.hp1 HG01123.hp2 HG01192.hp1 HG01243.hp2 HG01261.hp1 HG01496.hp1 HG01884.hp2 HG01891.hp2 HG01993.hp2 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18945.hp2 NA18948.hp1 NA18949.hp1 NA18955.hp1 NA18959.hp2 NA18972.hp1 NA18980.hp1 NA18984.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp2 NA18997.hp2 NA18998.hp2 NA19000.hp1 NA19004.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19076.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19084.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0001c0003 a0001c0021 others(1): Show a0001c0001 a0001c0003 a0001c0021 a0010c0016	a0001c0001t0001 a0001c0003t0001 a0001c0021t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0021t0001 a0010c0016t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0010 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0003t0001g0005 a0001c0021t0001g0030 a0010c0016t0001g0031	92	462	0.1991	12	c.23 others(23): Show c.2340_*2341insTATTCATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2173		chr11	TogoVar
APOA4_chr11_116815700_116828304	116818606	G G	GTATATAT others(5): Show GTATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	462	0.0022	12	c.22 others(23): Show c.2260_*2261insTATATATATATA	APOA4	ENSG00000110244.7	transcript	ENST00000357780.5	protein_coding		2093		chr11	TogoVar
APOBEC1_chr12_7644400_7670908	7659318	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0175 a0002c0001t0001g0175	1	432	0.0023	12	c.17- others(27): Show c.17-4687_17-4686insATATATATATAT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659322	A A	AAAAAAAA others(5): Show AAAAAAAAAAAAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0332 a0001c0003t0001g0332	1	432	0.0023	12	c.17- others(27): Show c.17-4691_17-4690insATTTTTTTTTTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659322	A A	AAAAAAAA others(5): Show AAAAAAAATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0345 a0005c0006t0001g0345	1	432	0.0023	12	c.17- others(27): Show c.17-4691_17-4690insATATATTTTTTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7659322	A A	AAAATATA others(5): Show AAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02723.hp2 HG01109.hp2 HG02723.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0001 a0001c0003 a0002c0001	a0001c0003t0001 a0002c0001t0001 a0001c0003t0001 a0002c0001t0001	a0001c0003t0001g0109 a0002c0001t0001g0105 a0001c0003t0001g0109 a0002c0001t0001g0105	2	432	0.0046	12	c.17- others(27): Show c.17-4691_17-4690insATATATATATTT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7660371	G G	GGAAAGAA others(5): Show GGAAAGAAAGAAA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03041.hp1 HG02622.hp1 HG03041.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0099 a0002c0001t0001g0100 a0002c0001t0001g0099 a0002c0001t0001g0100	2	432	0.0046	12	c.16+ others(27): Show c.16+5485_16+5486insTTTCTTTCTTTC	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC1_chr12_7644400_7670908	7665752	G G	GACACACA others(5): Show GACACACACACAC	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp2 HG01516.hp2 others(6): Show HG00323.hp1 HG00423.hp2 HG01516.hp2 HG01517.hp2 HG02486.hp2 HG03579.hp1 NA18979.hp1 NA19065.hp1 NA19089.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0003 a0002c0001 others(1): Show a0001c0002 a0001c0003 a0002c0001 a0003c0004	a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 others(2): Show a0001c0002t0001 a0001c0003t0001 a0002c0001t0001 a0002c0001t0002 a0003c0004t0001	a0001c0002t0001g0309 a0001c0002t0001g0310 a0001c0002t0001g0407 others(6): Show a0001c0002t0001g0309 a0001c0002t0001g0310 a0001c0002t0001g0407 a0001c0003t0001g0406 a0001c0003t0001g0408 a0002c0001t0001g0405 a0002c0001t0002g0404 a0003c0004t0001g0311 a0003c0004t0001g0312	9	432	0.0208	12	c.16+ others(24): Show c.16+93_16+104dupGTGTGTGTGTGT	APOBEC1	ENSG00000111701.7	transcript	ENST00000229304.5	protein_coding	1/4			chr12	TogoVar
APOBEC3A_chr22_38952609_38968184	38958763	C C	CTCTCTTT others(5): Show CTCTCTTTCTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01069.hp1 HG01071.hp1 others(19): Show HG00621.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01516.hp1 HG01975.hp2 HG02109.hp2 HG02135.hp2 HG02976.hp1 HG03195.hp2 HG06807.hp2 NA18950.hp2 NA18952.hp2 NA18957.hp1 NA18964.hp2 NA18967.hp1 NA18974.hp2 NA18975.hp1 NA19058.hp1 NA19067.hp1 NA19074.hp1 NA19090.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0006 a0001c0002t0013 a0001c0002t0002 a0001c0002t0006 a0001c0002t0013	a0001c0002t0002g0006 a0001c0002t0002g0035 a0001c0002t0002g0036 others(2): Show a0001c0002t0002g0006 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0006g0006 a0001c0002t0013g0006	22	360	0.0611	12	c.30- others(25): Show c.30-776_30-775insCTTTCTTTTTCT	APOBEC3A	ENSG00000128383.14	transcript	ENST00000249116.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3B_chr22_38977347_38997779	38978546	A A	AAAACAAA others(5): Show AAAACAAACAAAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 HG03486.hp1 HG03130.hp1 HG03486.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0141 a0005c0006t0001g0142 a0005c0006t0001g0141 a0005c0006t0001g0142	2	354	0.0057	12	c.-39 others(23): Show c.-3908_-3907insAAACAAACAAAC	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding		3800		chr22	TogoVar
APOBEC3B_chr22_38977347_38997779	38988683	C C	CTCTTTCT others(5): Show CTCTTTCTTTCTT	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01256.hp1 HG00733.hp1 HG01256.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0046 a0003c0003t0001g0046	2	354	0.0057	12	c.570 others(27): Show c.570-721_570-710dupTCTTTCTTTCTT	APOBEC3B	ENSG00000179750.16	transcript	ENST00000333467.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3C_chr22_39009257_39025352	39010621	A A	ATTTTGTT others(5): Show ATTTTGTTTTTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00423.hp1 others(57): Show HG00099.hp2 HG00323.hp1 HG00423.hp1 HG00438.hp2 HG00597.hp2 HG00621.hp2 HG00673.hp1 HG00735.hp2 HG01167.hp1 HG02027.hp1 HG02027.hp2 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp1 HG02486.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02735.hp1 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02965.hp1 HG03017.hp2 HG03209.hp1 HG03471.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG04228.hp1 NA18612.hp2 NA18949.hp2 NA18963.hp1 NA18966.hp1 NA18967.hp2 NA18971.hp1 NA18972.hp2 NA18977.hp2 NA18978.hp2 NA18979.hp2 NA18980.hp1 NA18997.hp2 NA19000.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19070.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp2 NA20752.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0025 a0001c0001t0028 a0001c0001t0033 a0001c0001t0036 a0001c0001t0047 a0001c0001t0054 a0001c0001t0055 a0001c0001t0061 a0001c0001t0064 a0001c0001t0065 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076	a0001c0001t0001g0002 a0001c0001t0001g0054 a0001c0001t0002g0001 others(43): Show a0001c0001t0001g0002 a0001c0001t0001g0054 a0001c0001t0002g0001 a0001c0001t0002g0004 a0001c0001t0002g0022 a0001c0001t0003g0001 a0001c0001t0003g0004 a0001c0001t0003g0007 a0001c0001t0003g0011 a0001c0001t0003g0026 a0001c0001t0003g0059 a0001c0001t0003g0071 a0001c0001t0004g0001 a0001c0001t0004g0004 a0001c0001t0006g0005 a0001c0001t0006g0006 a0001c0001t0006g0124 a0001c0001t0007g0005 a0001c0001t0007g0023 a0001c0001t0007g0122 a0001c0001t0008g0022 a0001c0001t0009g0001 a0001c0001t0009g0004 a0001c0001t0009g0021 a0001c0001t0010g0005 a0001c0001t0010g0006 a0001c0001t0012g0034 a0001c0001t0013g0001 a0001c0001t0013g0074 a0001c0001t0013g0125 a0001c0001t0017g0012 a0001c0001t0025g0037 a0001c0001t0025g0055 a0001c0001t0025g0075 a0001c0001t0028g0008 a0001c0001t0033g0012 a0001c0001t0036g0003 a0001c0001t0047g0096 a0001c0001t0054g0116 a0001c0001t0055g0017 a0001c0001t0061g0001 a0001c0001t0064g0004 a0001c0001t0065g0007 a0001c0001t0074g0003 a0001c0001t0075g0076 a0001c0001t0076g0037	60	460	0.1304	12	c.-37 others(23): Show c.-3742_-3741insTTTTGTTTTTGT	APOBEC3C	ENSG00000244509.4	transcript	ENST00000361441.5	protein_coding		3635		chr22	TogoVar
APOBEC3C_chr22_39009257_39025352	39016189	C C	CTTTATTT others(5): Show CTTTATTTATTTA	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02145.hp1 HG02559.hp1 others(8): Show HG02015.hp1 HG02145.hp1 HG02559.hp1 HG02647.hp1 HG02723.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG03579.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0028	a0001c0001t0002g0008 a0001c0001t0003g0071 a0001c0001t0008g0008 others(3): Show a0001c0001t0002g0008 a0001c0001t0003g0071 a0001c0001t0008g0008 a0001c0001t0008g0072 a0001c0001t0008g0081 a0001c0001t0028g0008	11	460	0.0239	12	c.174 others(27): Show c.174+438_174+439insTTTATTTATTTA	APOBEC3C	ENSG00000244509.4	transcript	ENST00000361441.5	protein_coding	2/3			chr22	TogoVar
APOBEC3C_chr22_39009257_39025352	39016190	A A	ATTATTTA others(5): Show ATTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG03927.hp1 NA18953.hp2 HG01243.hp2 HG03927.hp1 NA18953.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0028 a0001c0001t0006 a0001c0001t0028	a0001c0001t0006g0056 a0001c0001t0006g0077 a0001c0001t0028g0120 a0001c0001t0006g0056 a0001c0001t0006g0077 a0001c0001t0028g0120	3	460	0.0065	12	c.174 others(27): Show c.174+454_174+465dupATTTATTTATTT	APOBEC3C	ENSG00000244509.4	transcript	ENST00000361441.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3C_chr22_39009257_39025352	39023107	C C	CTATTTAT others(5): Show CTATTTATTTATT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01884.hp2 HG02055.hp2 others(21): Show HG01243.hp1 HG01884.hp2 HG02055.hp2 HG02145.hp2 HG02280.hp2 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02647.hp2 HG02717.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG03041.hp1 HG03130.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp2 NA18906.hp1 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0010 a0001c0001t0015 a0001c0001t0022 others(10): Show a0001c0001t0010 a0001c0001t0015 a0001c0001t0022 a0001c0001t0023 a0001c0001t0030 a0001c0001t0044 a0001c0001t0045 a0001c0001t0048 a0001c0001t0054 a0002c0002t0037 a0002c0002t0067 a0002c0002t0068 a0002c0002t0070	a0001c0001t0010g0038 a0001c0001t0010g0045 a0001c0001t0015g0032 others(19): Show a0001c0001t0010g0038 a0001c0001t0010g0045 a0001c0001t0015g0032 a0001c0001t0015g0044 a0001c0001t0015g0083 a0001c0001t0015g0112 a0001c0001t0015g0115 a0001c0001t0022g0038 a0001c0001t0022g0045 a0001c0001t0022g0114 a0001c0001t0023g0027 a0001c0001t0023g0044 a0001c0001t0023g0113 a0001c0001t0030g0027 a0001c0001t0044g0086 a0001c0001t0045g0069 a0001c0001t0048g0032 a0001c0001t0054g0116 a0002c0002t0037g0020 a0002c0002t0067g0020 a0002c0002t0068g0016 a0002c0002t0070g0020	24	460	0.0522	12	c.47 others(23): Show c.4720_*4721insTATTTATTTATT	APOBEC3C	ENSG00000244509.4	transcript	ENST00000361441.5	protein_coding		2756		chr22	TogoVar
APOBEC3D_chr22_39016127_39038277	39016189	C C	CTTTATTT others(5): Show CTTTATTTATTTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02145.hp2 HG02559.hp2 others(7): Show HG02015.hp1 HG02145.hp2 HG02559.hp2 HG02647.hp1 HG02723.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG03579.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0014	a0001c0001t0001g0002 a0001c0001t0001g0031 a0001c0001t0004g0031 others(3): Show a0001c0001t0001g0002 a0001c0001t0001g0031 a0001c0001t0004g0031 a0001c0001t0004g0098 a0001c0001t0005g0004 a0001c0001t0014g0022	10	458	0.0218	12	c.-53 others(23): Show c.-5331_-5330insTTTATTTATTTA	APOBEC3D	ENSG00000243811.12	transcript	ENST00000216099.13	protein_coding		4937		chr22	TogoVar
APOBEC3D_chr22_39016127_39038277	39016190	A A	ATTATTTA others(5): Show ATTATTTATTTAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG03927.hp2 NA18953.hp1 HG01243.hp2 HG03927.hp2 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0010 a0001c0001t0015 a0001c0001t0002 a0001c0001t0010 a0001c0001t0015	a0001c0001t0002g0004 a0001c0001t0010g0127 a0001c0001t0015g0136 a0001c0001t0002g0004 a0001c0001t0010g0127 a0001c0001t0015g0136	3	458	0.0066	12	c.-53 others(23): Show c.-5330_-5329insTTATTTATTTAT	APOBEC3D	ENSG00000243811.12	transcript	ENST00000216099.13	protein_coding		4936		chr22	TogoVar
APOBEC3D_chr22_39016127_39038277	39023107	C C	CTATTTAT others(5): Show CTATTTATTTATT	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01884.hp2 HG01934.hp1 others(22): Show HG01243.hp1 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02145.hp1 HG02280.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG03041.hp2 HG03130.hp1 HG03225.hp1 HG03453.hp2 HG03471.hp1 NA18906.hp1 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0002 a0001c0001 a0001c0006 a0002c0002	a0001c0001t0008 a0001c0001t0020 a0001c0001t0022 others(9): Show a0001c0001t0008 a0001c0001t0020 a0001c0001t0022 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0046 a0001c0001t0055 a0001c0001t0056 a0001c0001t0058 a0001c0006t0022 a0002c0002t0016	a0001c0001t0008g0012 a0001c0001t0008g0025 a0001c0001t0008g0054 others(14): Show a0001c0001t0008g0012 a0001c0001t0008g0025 a0001c0001t0008g0054 a0001c0001t0008g0184 a0001c0001t0008g0186 a0001c0001t0020g0036 a0001c0001t0022g0012 a0001c0001t0031g0025 a0001c0001t0032g0012 a0001c0001t0033g0026 a0001c0001t0033g0185 a0001c0001t0046g0179 a0001c0001t0055g0026 a0001c0001t0056g0026 a0001c0001t0058g0026 a0001c0006t0022g0012 a0002c0002t0016g0178	25	458	0.0546	12	c.210 others(27): Show c.210+107_210+118dupATTTATTTATTT	APOBEC3D	ENSG00000243811.12	transcript	ENST00000216099.13	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOBEC3G_chr22_39072275_39092743	39091343	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02647.hp1 HG03579.hp2 others(2): Show HG02145.hp1 HG02647.hp1 HG03579.hp2 NA18965.hp1 NA18974.hp2	a0002 a0003 a0002 a0003	a0002c0003 a0003c0004 a0002c0003 a0003c0004	a0002c0003t0001 a0003c0004t0001 a0002c0003t0001 a0003c0004t0001	a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 others(1): Show a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0003c0004t0001g0005	5	424	0.0118	12	c.39 others(23): Show c.3922_*3923insGTGTGTGTGTGT	APOBEC3G	ENSG00000239713.9	transcript	ENST00000407997.4	protein_coding		3601		chr22	TogoVar
APOBEC3H_chr22_39092244_39109067	39093582	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0076 a0004c0004t0002g0076	1	418	0.0024	12	c.-37 others(23): Show c.-3769_-3768insAAAAAAAAAAAA	APOBEC3H	ENSG00000100298.16	transcript	ENST00000442487.8	protein_coding		3661		chr22	TogoVar
APOBEC4_chr1_183641275_183658316	183643256	C C	CTGTTTGT others(5): Show CTGTTTGTTTGTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0012 a0008c0008t0012	a0008c0008t0012g0035 a0008c0008t0012g0035	1	378	0.0027	12	c.44 others(23): Show c.4421_*4422insAACAAACAAACA	APOBEC4	ENSG00000173627.8	transcript	ENST00000308641.6	protein_coding		3018		chr1	TogoVar
APOBEC4_chr1_183641275_183658316	183643328	T T	TGTTGCCA others(5): Show TGTTGCCAGACTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	378	0.0027	12	c.43 others(23): Show c.4338_*4349dupCAGTCTGGCAAC	APOBEC4	ENSG00000173627.8	transcript	ENST00000308641.6	protein_coding		2946		chr1	TogoVar
APOBEC4_chr1_183641275_183658316	183650254	T T	TTCTTTAA others(5): Show TTCTTTAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03516.hp1 HG02145.hp2 HG03516.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0023 a0003c0004t0003g0023	2	378	0.0053	12	c.-30 others(29): Show c.-30-1444_-30-1443insTTTTTTTAAAGA	APOBEC4	ENSG00000173627.8	transcript	ENST00000308641.6	protein_coding	1/1			chr1	TogoVar
APOBR_chr16_28489643_28503964	28492643	A A	AATATATA others(5): Show AATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02486.hp1 HG02055.hp2 HG02486.hp1	a0019 a0019	a0019c0019 a0019c0019	a0019c0019t0001 a0019c0019t0001	a0019c0019t0001g0001 a0019c0019t0001g0001	2	406	0.0049	12	c.-20 others(23): Show c.-2039_-2038insATATATATATAT	APOBR	ENSG00000184730.12	transcript	ENST00000564831.6	protein_coding		1999		chr16	TogoVar
APOC1_chr19_44909608_44924346	44916137	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02698.hp1 HG02723.hp2 HG02451.hp2 HG02698.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0024	3	436	0.0069	12	c.59- others(23): Show c.59-45_59-34dupAAAAAAAAAAAA	APOC1	ENSG00000130208.10	transcript	ENST00000592535.6	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
APOC2_chr19_44941051_44954565	44946191	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	398	0.0025	12	c.-14 others(27): Show c.-14+149_-14+160dupTGTGTGTGTGTG	APOC2	ENSG00000234906.11	transcript	ENST00000252490.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
APOC3_chr11_116824907_116838072	116831189	A A	ATTTCTTT others(5): Show ATTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18951.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0102 a0001c0002t0002g0102	1	450	0.0022	12	c.179 others(27): Show c.179+350_179+361dupTTTCTTTCTTTC	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC3_chr11_116824907_116838072	116831285	T T	TTTCTTTC others(5): Show TTTCTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG02523.hp1 NA19084.hp1 HG02523.hp1 NA19084.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0058 a0001c0002t0001g0058	2	450	0.0044	12	c.179 others(27): Show c.179+399_179+400insTCTTCTTTCTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr11	TogoVar
APOC4_chr19_44937237_44950496	44938194	G G	GTGTTTTT others(5): Show GTGTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG03098.hp2 HG03579.hp2 others(1): Show HG02109.hp2 HG03098.hp2 HG03579.hp2 NA19058.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0003c0003 a0001c0001 a0001c0004 a0003c0003	a0001c0001t0002 a0001c0004t0002 a0003c0003t0001 a0001c0001t0002 a0001c0004t0002 a0003c0003t0001	a0001c0001t0002g0003 a0001c0004t0002g0006 a0003c0003t0001g0015 a0001c0001t0002g0003 a0001c0004t0002g0006 a0003c0003t0001g0015	4	398	0.0101	12	c.-40 others(23): Show c.-4084_-4083insTGTTTTTTTTTT	APOC4	ENSG00000267467.4	transcript	ENST00000592954.2	protein_coding		4042		chr19	TogoVar
APOC4_chr19_44937237_44950496	44938194	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG01123.hp2 others(34): Show HG00140.hp2 HG00323.hp2 HG01123.hp2 HG01433.hp1 HG01496.hp1 HG01934.hp2 HG01943.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02148.hp1 HG02258.hp2 HG02300.hp1 HG02486.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp1 HG02895.hp1 HG03130.hp1 HG03195.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp1 HG03688.hp1 NA18943.hp1 NA18955.hp2 NA18963.hp1 NA18968.hp1 NA18977.hp2 NA18985.hp2 NA18991.hp1 NA19030.hp1 NA19065.hp2 NA19240.hp2 NA20905.hp1 NA20905.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0003 a0004c0005 a0001c0001 a0003c0003 a0004c0005	a0001c0001t0001 a0003c0003t0001 a0003c0003t0003 others(1): Show a0001c0001t0001 a0003c0003t0001 a0003c0003t0003 a0004c0005t0001	a0001c0001t0001g0003 a0003c0003t0001g0003 a0003c0003t0001g0004 others(8): Show a0001c0001t0001g0003 a0003c0003t0001g0003 a0003c0003t0001g0004 a0003c0003t0001g0007 a0003c0003t0001g0009 a0003c0003t0001g0019 a0003c0003t0001g0033 a0003c0003t0003g0007 a0004c0005t0001g0004 a0004c0005t0001g0009 a0004c0005t0001g0015	37	398	0.0930	12	c.-40 others(23): Show c.-4084_-4083insTTTTTTTTTTTT	APOC4	ENSG00000267467.4	transcript	ENST00000592954.2	protein_coding		4042		chr19	TogoVar
APOC4_chr19_44937237_44950496	44946191	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	1	398	0.0025	12	c.88 others(21): Show c.886_*887insTGTGTGTGTGTG	APOC4	ENSG00000267467.4	transcript	ENST00000592954.2	protein_coding		696		chr19	TogoVar

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