Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATF2_chr2_175067259_175173203	175163918	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01891.hp1 HG02074.hp2 others(19): Show HG00735.hp1 HG01891.hp1 HG02074.hp2 HG02109.hp1 HG02257.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02895.hp1 HG02896.hp1 HG02922.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03486.hp1 HG04199.hp2 NA18522.hp1 NA18906.hp1 NA18948.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0011 a0001c0001t0001g0206 a0001c0001t0003g0002 others(18): Show a0001c0001t0001g0011 a0001c0001t0001g0206 a0001c0001t0003g0002 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0149 a0001c0001t0003g0150 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0003g0153 a0001c0001t0003g0154 a0001c0001t0003g0200 a0001c0001t0005g0197 a0001c0001t0005g0198 a0001c0001t0005g0199	22	46	0.4783	12	c.-14 others(31): Show c.-143+4120_-143+4131dupTTTTTTTTTTTT	ATF2	ENSG00000115966.18	transcript	ENST00000264110.7	protein_coding	1/13			chr2	TogoVar
ATF3_chr1_212603761_212625775	212603776	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	111	0.0090	12	c.-51 others(23): Show c.-5159_-5158insTGTGTGTGTGTG	ATF3	ENSG00000162772.18	transcript	ENST00000341491.9	protein_coding		4984		chr1	TogoVar
ATF4_chr22_39515562_39527683	39523993	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01168.hp1 NA18997.hp2 HG00639.hp1 HG01168.hp1 NA18997.hp2	a0002 a0010 a0002 a0010	a0002c0002 a0010c0013 a0002c0002 a0010c0013	a0002c0002t0002 a0010c0013t0001 a0002c0002t0002 a0010c0013t0001	a0002c0002t0002g0001 a0010c0013t0001g0001 a0002c0002t0002g0001 a0010c0013t0001g0001	3	174	0.0172	12	c.13 others(23): Show c.1391_*1392insTTTTTTTTTTTT	ATF4	ENSG00000128272.18	transcript	ENST00000674920.3	protein_coding		1311		chr22	TogoVar
ATF4_chr22_39515562_39527683	39526948	A A	AGAGGAGC others(5): Show AGAGGAGCTTGGC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	352	0.0028	12	c.43 others(23): Show c.4346_*4347insGAGGAGCTTGGC	ATF4	ENSG00000128272.18	transcript	ENST00000674920.3	protein_coding		4266		chr22	TogoVar
ATF6B_chr6_32110264_32133246	32129540	G G	GAGACTTA others(5): Show GAGACTTATGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01934.hp2 HG01975.hp1 HG01993.hp1 others(4): Show HG01934.hp2 HG01975.hp1 HG01993.hp1 HG02004.hp2 HG02071.hp2 HG02148.hp2 HG02683.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0079 others(1): Show a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0079 a0001c0001t0004g0145	7	438	0.0160	12	c.-13 others(23): Show c.-1345_-1334dupTCTCATAAGTCT	ATF6B	ENSG00000213676.13	transcript	ENST00000375203.8	protein_coding		1295		chr6	TogoVar
ATF6_chr1_161761320_161969070	161773140	A A	ATTTTTTT others(5): Show ATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp1 HG00558.hp1 others(36): Show HG00408.hp1 HG00423.hp1 HG00558.hp1 HG00621.hp2 HG01123.hp1 HG01346.hp1 HG01496.hp2 HG01952.hp2 HG01981.hp1 HG02004.hp1 HG02083.hp1 HG02293.hp2 HG02809.hp2 HG02896.hp2 HG03486.hp2 HG03688.hp1 HG04184.hp1 NA18522.hp2 NA18942.hp1 NA18946.hp2 NA18950.hp1 NA18951.hp2 NA18960.hp1 NA18975.hp2 NA18980.hp1 NA18983.hp2 NA18998.hp2 NA19002.hp1 NA19004.hp2 NA19007.hp1 NA19011.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp1 NA19063.hp2 NA19079.hp1 NA19082.hp1 NA19085.hp1 NA19089.hp1	a0002 a0004 a0006 a0002 a0004 a0006	a0002c0003 a0004c0005 a0004c0006 others(1): Show a0002c0003 a0004c0005 a0004c0006 a0006c0012	a0002c0003t0002 a0002c0003t0004 a0002c0003t0008 others(6): Show a0002c0003t0002 a0002c0003t0004 a0002c0003t0008 a0002c0003t0013 a0002c0003t0023 a0002c0003t0052 a0004c0005t0027 a0004c0006t0059 a0006c0012t0002	a0002c0003t0002g0235 a0002c0003t0002g0238 a0002c0003t0002g0239 others(36): Show a0002c0003t0002g0235 a0002c0003t0002g0238 a0002c0003t0002g0239 a0002c0003t0002g0240 a0002c0003t0002g0241 a0002c0003t0002g0242 a0002c0003t0002g0243 a0002c0003t0002g0244 a0002c0003t0002g0245 a0002c0003t0002g0246 a0002c0003t0002g0247 a0002c0003t0002g0248 a0002c0003t0002g0249 a0002c0003t0002g0250 a0002c0003t0002g0251 a0002c0003t0002g0252 a0002c0003t0002g0253 a0002c0003t0002g0254 a0002c0003t0002g0255 a0002c0003t0002g0257 a0002c0003t0002g0258 a0002c0003t0002g0259 a0002c0003t0002g0261 a0002c0003t0002g0262 a0002c0003t0002g0264 a0002c0003t0002g0265 a0002c0003t0002g0272 a0002c0003t0002g0308 a0002c0003t0002g0310 a0002c0003t0002g0323 a0002c0003t0004g0309 a0002c0003t0008g0271 a0002c0003t0013g0263 a0002c0003t0023g0236 a0002c0003t0023g0237 a0002c0003t0052g0256 a0004c0005t0027g0311 a0004c0006t0059g0234 a0006c0012t0002g0260	39	272	0.1434	12	c.83- others(27): Show c.83-5102_83-5091dupTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161775429	C C	CTCTATCA others(5): Show CTCTATCATTCTG	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02895.hp2 HG02897.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0026 a0004c0005t0026	a0004c0005t0026g0314 a0004c0005t0026g0315 a0004c0005t0026g0314 a0004c0005t0026g0315	2	330	0.0061	12	c.83- others(27): Show c.83-2803_83-2792dupGTCTATCATTCT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161812784	C C	CTGTGTGT others(5): Show CTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0063 a0004c0005t0063	a0004c0005t0063g0313 a0004c0005t0063g0313	1	150	0.0067	12	c.910 others(29): Show c.910-6827_910-6816dupGTGTGTGTGTGT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161829189	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02451.hp1 HG02922.hp2 others(4): Show HG02280.hp1 HG02451.hp1 HG02922.hp2 HG02976.hp1 NA18964.hp1 NA18994.hp1 NA18998.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0011 a0001c0001t0028 a0002c0003t0002 others(2): Show a0001c0001t0011 a0001c0001t0028 a0002c0003t0002 a0002c0003t0008 a0002c0003t0049	a0001c0001t0011g0318 a0001c0001t0011g0319 a0001c0001t0028g0316 others(4): Show a0001c0001t0011g0318 a0001c0001t0011g0319 a0001c0001t0028g0316 a0001c0001t0028g0321 a0002c0003t0002g0241 a0002c0003t0008g0285 a0002c0003t0049g0276	7	187	0.0374	12	c.118 others(31): Show c.1187+8042_1187+8053dupTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161851233	A A	AACACACA others(5): Show AACACACACACAC	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0010 a0002c0003t0010	a0002c0003t0010g0282 a0002c0003t0010g0282	1	17	0.0588	12	c.132 others(29): Show c.1320-458_1320-447dupACACACACACAC	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161920294	C C	CTCTTTTT others(5): Show CTCTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01243.hp1 HG02451.hp1 HG01070.hp1 HG01243.hp1 HG02451.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0008 a0001c0001 a0005c0008	a0001c0001t0028 a0001c0001t0065 a0005c0008t0062 a0001c0001t0028 a0001c0001t0065 a0005c0008t0062	a0001c0001t0028g0316 a0001c0001t0065g0320 a0005c0008t0062g0325 a0001c0001t0028g0316 a0001c0001t0065g0320 a0005c0008t0062g0325	3	4	0.7500	12	c.180 others(31): Show c.1804+7915_1804+7916insCTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF6_chr1_161761320_161969070	161920294	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00639.hp2 HG01167.hp2 others(32): Show HG00423.hp2 HG00639.hp2 HG01167.hp2 HG01515.hp2 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02165.hp1 HG02451.hp2 HG02615.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp1 HG02895.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp1 HG03486.hp2 HG03831.hp1 HG06807.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18946.hp1 NA18956.hp1 NA18992.hp1 NA19003.hp2 NA19030.hp1 NA19070.hp1 NA19089.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0004 a0001c0001t0020 a0001c0001t0024 others(7): Show a0001c0001t0004 a0001c0001t0020 a0001c0001t0024 a0001c0001t0025 a0001c0001t0048 a0001c0001t0050 a0001c0001t0051 a0001c0002t0001 a0001c0002t0037 a0002c0003t0023	a0001c0001t0004g0163 a0001c0001t0004g0169 a0001c0001t0004g0170 others(32): Show a0001c0001t0004g0163 a0001c0001t0004g0169 a0001c0001t0004g0170 a0001c0001t0004g0171 a0001c0001t0004g0180 a0001c0001t0004g0189 a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0004g0194 a0001c0001t0004g0201 a0001c0001t0004g0205 a0001c0001t0004g0206 a0001c0001t0004g0324 a0001c0001t0020g0167 a0001c0001t0020g0202 a0001c0001t0024g0179 a0001c0001t0024g0186 a0001c0001t0025g0196 a0001c0001t0048g0191 a0001c0001t0050g0172 a0001c0001t0051g0168 a0001c0002t0001g0023 a0001c0002t0001g0153 a0001c0002t0001g0158 a0001c0002t0001g0173 a0001c0002t0001g0213 a0001c0002t0001g0219 a0001c0002t0001g0220 a0001c0002t0001g0222 a0001c0002t0001g0226 a0001c0002t0001g0228 a0001c0002t0001g0230 a0001c0002t0037g0161 a0002c0003t0023g0236 a0002c0003t0023g0237	35	36	0.9722	12	c.180 others(31): Show c.1804+7921_1804+7932dupTTTTTTTTTTTT	ATF6	ENSG00000118217.7	transcript	ENST00000367942.4	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr1	TogoVar
ATF7IP2_chr16_10381061_10488638	10475722	G G	GAAAAAAA others(5): Show GAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0002 a0002	a0002c0018 a0002c0018	a0002c0018t0010 a0002c0018t0010	a0002c0018t0010g0197 a0002c0018t0010g0197	1	108	0.0093	12	c.154 others(31): Show c.1549+1744_1549+1755dupAAAAAAAAAAAA	ATF7IP2	ENSG00000166669.14	transcript	ENST00000562102.6	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
ATF7IP_chr12_14360682_14507930	14408116	G G	GCACACAC others(5): Show GCACACACACACA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02922.hp2 HG02965.hp2 others(2): Show HG02630.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG06807.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0012 a0003c0003t0012	a0003c0003t0012g0001 a0003c0003t0012g0180 a0003c0003t0012g0183 a0003c0003t0012g0001 a0003c0003t0012g0180 a0003c0003t0012g0183	5	30	0.1667	12	c.-7- others(29): Show c.-7-15778_-7-15767dupCACACACACACA	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	1/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14426823	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0013 a0003c0003t0013	a0003c0003t0013g0164 a0003c0003t0013g0164	1	337	0.0030	12	c.155 others(31): Show c.1558+1366_1558+1377dupAAAAAAAAAAAA	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14473288	C C	CTGTATGT others(5): Show CTGTATGTGTGTG	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp2 HG01123.hp2 others(20): Show HG00438.hp2 HG00673.hp2 HG01123.hp2 HG02055.hp2 HG02257.hp1 HG02717.hp1 HG03195.hp1 NA18955.hp2 NA18967.hp2 NA18968.hp1 NA18977.hp1 NA18979.hp2 NA18986.hp1 NA19002.hp1 NA19003.hp1 NA19004.hp2 NA19007.hp2 NA19043.hp1 NA19056.hp1 NA19066.hp1 NA19072.hp1 NA19090.hp1 NA19091.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0014	a0001c0001 a0001c0020 a0002c0002 others(4): Show a0001c0001 a0001c0020 a0002c0002 a0002c0006 a0003c0003 a0004c0008 a0014c0019	a0001c0001t0002 a0001c0020t0036 a0002c0002t0001 others(6): Show a0001c0001t0002 a0001c0020t0036 a0002c0002t0001 a0002c0006t0008 a0003c0003t0004 a0003c0003t0011 a0003c0003t0014 a0004c0008t0005 a0014c0019t0001	a0001c0001t0002g0060 a0001c0001t0002g0064 a0001c0001t0002g0066 others(19): Show a0001c0001t0002g0060 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0072 a0001c0020t0036g0134 a0002c0002t0001g0206 a0002c0006t0008g0220 a0002c0006t0008g0226 a0003c0003t0004g0003 a0003c0003t0004g0186 a0003c0003t0004g0187 a0003c0003t0004g0190 a0003c0003t0004g0192 a0003c0003t0004g0193 a0003c0003t0004g0194 a0003c0003t0004g0200 a0003c0003t0004g0201 a0003c0003t0004g0202 a0003c0003t0011g0321 a0003c0003t0014g0171 a0004c0008t0005g0006 a0014c0019t0001g0310	23	94	0.2447	12	c.286 others(31): Show c.2863-2601_2863-2600insGTATGTGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494284	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG03579.hp2 NA18981.hp1 NA18994.hp1 HG03579.hp2 NA18981.hp1 NA18994.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0001c0001t0003 a0003c0003t0011 a0001c0001t0002 a0001c0001t0003 a0003c0003t0011	a0001c0001t0002g0068 a0001c0001t0003g0075 a0003c0003t0011g0185 a0001c0001t0002g0068 a0001c0001t0003g0075 a0003c0003t0011g0185	3	124	0.0242	12	c.328 others(31): Show c.3281-1908_3281-1897dupATATATATATAT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATATAT others(5): Show ATATATATATATG	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01517.hp1 NA18946.hp1 others(2): Show HG01516.hp2 HG01517.hp1 NA18946.hp1 NA19056.hp2 NA19084.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0010 a0001c0001 a0007c0010	a0001c0001t0003 a0001c0001t0017 a0007c0010t0002 a0001c0001t0003 a0001c0001t0017 a0007c0010t0002	a0001c0001t0003g0090 a0001c0001t0017g0031 a0001c0001t0017g0051 others(2): Show a0001c0001t0003g0090 a0001c0001t0017g0031 a0001c0001t0017g0051 a0007c0010t0002g0014 a0007c0010t0002g0025	5	152	0.0329	12	c.328 others(31): Show c.3281-1897_3281-1896insATATATATATGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATATAT others(5): Show ATATATATATGTG	intron_variant intron_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0010 a0005c0007t0010	a0005c0007t0010g0319 a0005c0007t0010g0319	1	148	0.0068	12	c.328 others(31): Show c.3281-1897_3281-1896insATATATATGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATATAT others(5): Show ATATATATGTGTG	intron_variant intron_variant	MODIFIER	HG00609.hp2 NA18977.hp2 HG00609.hp2 NA18977.hp2	a0002 a0005 a0002 a0005	a0002c0006 a0005c0007 a0002c0006 a0005c0007	a0002c0006t0008 a0005c0007t0010 a0002c0006t0008 a0005c0007t0010	a0002c0006t0008g0223 a0005c0007t0010g0316 a0002c0006t0008g0223 a0005c0007t0010g0316	2	149	0.0134	12	c.328 others(31): Show c.3281-1897_3281-1896insATATATGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATATGT others(5): Show ATATATGTGTGTG	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG03139.hp1 HG03453.hp1 HG02451.hp2 HG03139.hp1 HG03453.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0007 a0003c0005t0007	a0003c0005t0007g0322 a0003c0005t0007g0329 a0003c0005t0007g0331 a0003c0005t0007g0322 a0003c0005t0007g0329 a0003c0005t0007g0331	3	150	0.0200	12	c.328 others(31): Show c.3281-1897_3281-1896insATATGTGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7IP_chr12_14360682_14507930	14494333	A A	ATATGTGT others(5): Show ATATGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0007 a0003c0005t0007	a0003c0005t0007g0325 a0003c0005t0007g0325	1	148	0.0068	12	c.328 others(31): Show c.3281-1897_3281-1896insATGTGTGTGTGT	ATF7IP	ENSG00000171681.13	transcript	ENST00000261168.9	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
ATF7_chr12_53507054_53631382	53529710	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00733.hp2 HG01070.hp2 others(40): Show HG00280.hp2 HG00733.hp2 HG01070.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01496.hp2 HG02056.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp2 HG02165.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp2 HG02622.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp2 HG02922.hp2 HG03130.hp1 HG03516.hp1 NA18946.hp2 NA18948.hp2 NA18954.hp1 NA18956.hp1 NA18964.hp2 NA18965.hp2 NA18970.hp2 NA18971.hp1 NA18980.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19010.hp1 NA19030.hp1 NA19081.hp2 NA19084.hp1 NA19240.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0017 a0001c0001t0022 a0001c0001t0025 a0001c0002t0003 a0001c0002t0005	a0001c0001t0001g0018 a0001c0001t0001g0038 a0001c0001t0001g0167 others(40): Show a0001c0001t0001g0018 a0001c0001t0001g0038 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0191 a0001c0001t0001g0281 a0001c0001t0001g0295 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0310 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0112 a0001c0001t0003g0165 a0001c0001t0003g0173 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0185 a0001c0001t0003g0322 a0001c0001t0003g0323 a0001c0001t0004g0025 a0001c0001t0004g0160 a0001c0001t0004g0161 a0001c0001t0004g0162 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0192 a0001c0001t0017g0174 a0001c0001t0022g0169 a0001c0001t0025g0315 a0001c0002t0003g0189 a0001c0002t0005g0159 a0001c0002t0005g0166 a0001c0002t0005g0171 a0001c0002t0005g0172 a0001c0002t0005g0181 a0001c0002t0005g0182	43	125	0.3440	12	c.927 others(29): Show c.927+2022_927+2033dupGTGTGTGTGTGT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53529710	T T	TATACACA others(5): Show TATACACACACAC	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0032 a0001c0001t0015g0032	1	83	0.0120	12	c.927 others(29): Show c.927+2033_927+2034insGTGTGTGTGTAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53529734	C C	CACACACA others(5): Show CACACACACACAT	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0145 a0001c0001t0006g0145	1	305	0.0033	12	c.927 others(29): Show c.927+2009_927+2010insATGTGTGTGTGT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	9/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53535328	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	250	0.0040	12	c.403 others(27): Show c.403-681_403-670dupTTTTTTTTTTTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	5/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53542107	G G	GTTTTTTT others(5): Show GTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00621.hp1 HG00639.hp1 others(26): Show HG00423.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp2 HG01109.hp1 HG01928.hp1 HG01934.hp1 HG01952.hp2 HG02055.hp1 HG02056.hp1 HG02723.hp2 HG02735.hp1 HG03492.hp1 HG03654.hp2 HG03688.hp2 HG03704.hp2 HG03927.hp1 NA18955.hp1 NA19000.hp1 NA19005.hp1 NA19030.hp1 NA19068.hp1 NA19081.hp1 NA19086.hp1 NA19087.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0024 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0024 a0001c0001t0025 a0001c0001t0027	a0001c0001t0001g0038 a0001c0001t0001g0183 a0001c0001t0001g0195 others(26): Show a0001c0001t0001g0038 a0001c0001t0001g0183 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0212 a0001c0001t0001g0220 a0001c0001t0001g0231 a0001c0001t0001g0238 a0001c0001t0001g0244 a0001c0001t0001g0258 a0001c0001t0001g0264 a0001c0001t0001g0268 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0293 a0001c0001t0001g0296 a0001c0001t0001g0300 a0001c0001t0001g0303 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0328 a0001c0001t0003g0221 a0001c0001t0024g0239 a0001c0001t0025g0315 a0001c0001t0027g0194	29	191	0.1518	12	c.264 others(29): Show c.264+1211_264+1222dupAAAAAAAAAAAA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	4/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587366	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00544.hp2 others(60): Show HG00140.hp1 HG00408.hp1 HG00544.hp2 HG00609.hp2 HG00639.hp1 HG00733.hp2 HG01070.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01192.hp1 HG01258.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG02074.hp1 HG02080.hp2 HG02129.hp1 HG02135.hp2 HG02258.hp1 HG02280.hp1 HG02300.hp2 HG02451.hp2 HG02523.hp1 HG02630.hp2 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02735.hp1 HG02818.hp2 HG02922.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03491.hp1 HG03516.hp1 HG03654.hp2 HG03704.hp2 NA18944.hp2 NA18948.hp2 NA18953.hp1 NA18954.hp1 NA18955.hp2 NA18960.hp1 NA18964.hp2 NA18965.hp2 NA18970.hp2 NA18973.hp1 NA18982.hp2 NA18983.hp1 NA18991.hp1 NA18993.hp1 NA19007.hp1 NA19011.hp1 NA19030.hp1 NA19068.hp2 NA19080.hp2 NA20752.hp2 NA20805.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0013 a0001c0001t0024 a0001c0001t0025 a0001c0002t0005	a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0180 others(60): Show a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0001g0180 a0001c0001t0001g0183 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0242 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0268 a0001c0001t0001g0274 a0001c0001t0001g0278 a0001c0001t0001g0283 a0001c0001t0001g0295 a0001c0001t0001g0297 a0001c0001t0001g0314 a0001c0001t0001g0319 a0001c0001t0002g0001 a0001c0001t0002g0024 a0001c0001t0002g0040 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0130 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0140 a0001c0001t0003g0027 a0001c0001t0003g0112 a0001c0001t0003g0165 a0001c0001t0003g0173 a0001c0001t0003g0177 a0001c0001t0003g0184 a0001c0001t0003g0322 a0001c0001t0003g0323 a0001c0001t0004g0025 a0001c0001t0004g0161 a0001c0001t0004g0186 a0001c0001t0013g0021 a0001c0001t0024g0239 a0001c0001t0025g0315 a0001c0002t0005g0166 a0001c0002t0005g0171 a0001c0002t0005g0172 a0001c0002t0005g0181 a0001c0002t0005g0182	63	151	0.4172	12	c.48+ others(29): Show c.48+13575_48+13586dupTTTTTTTTTTTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587820	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 NA18941.hp2 NA20300.hp2 HG00639.hp1 NA18941.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0247 a0001c0001t0001g0319 a0001c0001t0010g0071 a0001c0001t0001g0247 a0001c0001t0001g0319 a0001c0001t0010g0071	3	306	0.0098	12	c.48+ others(29): Show c.48+13121_48+13132dupATATATATATAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53587843	A A	ATATATAT others(5): Show ATATATATATATT	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	205	0.0049	12	c.48+ others(29): Show c.48+13109_48+13110insAATATATATATA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53592570	A A	AATAGATT others(5): Show AATAGATTCAACC	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA18998.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0255 a0001c0001t0001g0255	1	328	0.0030	12	c.48+ others(27): Show c.48+8371_48+8382dupGGTTGAATCTAT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	2/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53609821	C C	CTTTTTTT others(5): Show CTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02486.hp1 HG02572.hp2 others(8): Show HG02145.hp2 HG02486.hp1 HG02572.hp2 NA18953.hp2 NA18993.hp2 NA18994.hp2 NA19000.hp1 NA19010.hp2 NA19080.hp2 NA19084.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0020 a0001c0001t0028 a0001c0001t0001 a0001c0001t0020 a0001c0001t0028	a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0246 others(8): Show a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0301 a0001c0001t0020g0316 a0001c0001t0028g0224	11	81	0.1358	12	c.-21 others(29): Show c.-21-8812_-21-8801dupAAAAAAAAAAAA	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding	1/11			chr12	TogoVar
ATF7_chr12_53507054_53631382	53628117	A A	AAAATAAA others(5): Show AAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp2 NA18947.hp1 NA18965.hp1 others(3): Show HG01891.hp2 NA18947.hp1 NA18965.hp1 NA18984.hp1 NA19080.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0006 a0001c0003t0001 a0001c0001t0006 a0001c0003t0001	a0001c0001t0006g0141 a0001c0001t0006g0142 a0001c0001t0006g0143 others(3): Show a0001c0001t0006g0141 a0001c0001t0006g0142 a0001c0001t0006g0143 a0001c0001t0006g0144 a0001c0001t0006g0145 a0001c0003t0001g0235	6	223	0.0269	12	c.-18 others(23): Show c.-1861_-1860insATTTATTTATTT	ATF7	ENSG00000170653.19	transcript	ENST00000420353.7	protein_coding		1736		chr12	TogoVar
ATG10_chr5_81967023_82261133	81993336	C C	CTTCCTTC others(5): Show CTTCCTTCCTTCT	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0150 a0001c0001t0009g0150	1	94	0.0106	12	c.108 others(29): Show c.108+5661_108+5662insCTTCCTTCTTTC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	81993352	T T	TTTCTTTC others(5): Show TTTCTTTCTTTCC	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0129 a0001c0001t0003g0129	1	209	0.0048	12	c.108 others(29): Show c.108+5681_108+5682insTTTCCTTCTTTC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82118387	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02809.hp2 HG02280.hp1 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0016 a0001c0001t0014 a0001c0001t0016	a0001c0001t0014g0219 a0001c0001t0016g0032 a0001c0001t0014g0219 a0001c0001t0016g0032	2	61	0.0328	12	c.217 others(31): Show c.217-46005_217-45994dupATATATATATAT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82138840	T T	TCCCTCCC others(5): Show TCCCTCCCCCTCC	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01074.hp2 HG01081.hp1 others(24): Show HG00597.hp1 HG01074.hp2 HG01081.hp1 HG01256.hp1 HG01256.hp2 HG01261.hp2 HG01361.hp2 HG01517.hp1 HG01981.hp2 HG02258.hp2 HG02602.hp1 HG02683.hp2 HG02717.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03209.hp2 HG03492.hp2 HG04115.hp2 HG04199.hp1 NA18952.hp1 NA18986.hp1 NA19003.hp1 NA19043.hp2 NA19070.hp1 NA20300.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0009 a0001c0001t0021 others(9): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0021 a0002c0002t0002 a0002c0002t0004 a0002c0002t0006 a0002c0002t0008 a0002c0002t0013 a0002c0002t0030 a0002c0002t0032 a0002c0002t0034 a0002c0002t0035	a0001c0001t0001g0108 a0001c0001t0001g0132 a0001c0001t0001g0134 others(24): Show a0001c0001t0001g0108 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0009g0136 a0001c0001t0021g0145 a0002c0002t0002g0053 a0002c0002t0002g0055 a0002c0002t0002g0061 a0002c0002t0002g0063 a0002c0002t0002g0065 a0002c0002t0002g0084 a0002c0002t0002g0093 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0004g0116 a0002c0002t0006g0107 a0002c0002t0006g0112 a0002c0002t0008g0064 a0002c0002t0013g0103 a0002c0002t0030g0089 a0002c0002t0032g0120 a0002c0002t0034g0086 a0002c0002t0035g0066	27	133	0.2030	12	c.217 others(31): Show c.217-25529_217-25518dupCCCCTCCCCCTC	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82161696	A A	AACACACA others(5): Show AACACACACACAC	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01074.hp1 HG01175.hp2 others(22): Show HG00741.hp2 HG01074.hp1 HG01175.hp2 HG01884.hp2 HG01891.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp2 HG02717.hp2 HG02809.hp2 HG03041.hp1 HG03225.hp1 HG03471.hp2 HG03490.hp1 HG03669.hp2 HG03834.hp1 HG04184.hp1 HG06807.hp2 NA18940.hp1 NA18940.hp2 NA18951.hp2 NA19003.hp1 NA19070.hp1 NA19070.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0006c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0014 a0001c0001t0023 a0002c0002t0002 a0002c0002t0008 a0003c0003t0001 a0003c0003t0012 a0004c0004t0002 a0004c0004t0004 a0004c0004t0027 a0006c0006t0003	a0001c0001t0001g0190 a0001c0001t0003g0169 a0001c0001t0003g0170 others(22): Show a0001c0001t0001g0190 a0001c0001t0003g0169 a0001c0001t0003g0170 a0001c0001t0009g0151 a0001c0001t0009g0152 a0001c0001t0014g0219 a0001c0001t0023g0138 a0002c0002t0002g0058 a0002c0002t0002g0065 a0002c0002t0002g0083 a0002c0002t0002g0084 a0002c0002t0008g0064 a0002c0002t0008g0079 a0002c0002t0008g0119 a0003c0003t0001g0049 a0003c0003t0001g0177 a0003c0003t0001g0200 a0003c0003t0001g0201 a0003c0003t0001g0202 a0003c0003t0012g0193 a0004c0004t0002g0173 a0004c0004t0002g0174 a0004c0004t0004g0196 a0004c0004t0027g0185 a0006c0006t0003g0104	25	52	0.4808	12	c.217 others(29): Show c.217-2677_217-2666dupCACACACACACA	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82197702	T T	TTTTCTTT others(5): Show TTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0011 a0001c0001t0041g0011	1	212	0.0047	12	c.453 others(31): Show c.453+19125_453+19136dupTTCTTTCTTTCT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82197720	T T	TTCTATCT others(5): Show TTCTATCTATCTA	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0006 a0004c0004t0006	a0004c0004t0006g0187 a0004c0004t0006g0187	1	79	0.0127	12	c.453 others(31): Show c.453+19177_453+19188dupATCTATCTATCT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82200864	A A	ATTATTTA others(5): Show ATTATTTATTTAT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02922.hp2 HG03491.hp2 others(2): Show HG02698.hp2 HG02922.hp2 HG03491.hp2 HG03492.hp1 NA19043.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0001c0001t0024 a0001c0001t0043 others(1): Show a0001c0001t0003 a0001c0001t0024 a0001c0001t0043 a0003c0003t0007	a0001c0001t0003g0223 a0001c0001t0024g0222 a0001c0001t0043g0021 others(2): Show a0001c0001t0003g0223 a0001c0001t0024g0222 a0001c0001t0043g0021 a0003c0003t0007g0036 a0003c0003t0007g0042	5	124	0.0403	12	c.453 others(31): Show c.453+22308_453+22319dupATTTATTTATTT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82218052	T T	TACACACA others(5): Show TACACACACACAC	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01433.hp2 HG02004.hp2 others(5): Show HG00741.hp1 HG01433.hp2 HG02004.hp2 HG02280.hp1 HG03209.hp2 HG03516.hp1 NA20129.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0001 a0001c0001t0016 a0001c0001t0021 others(2): Show a0001c0001t0001 a0001c0001t0016 a0001c0001t0021 a0002c0002t0004 a0004c0004t0002	a0001c0001t0001g0162 a0001c0001t0016g0031 a0001c0001t0016g0032 others(5): Show a0001c0001t0001g0162 a0001c0001t0016g0031 a0001c0001t0016g0032 a0001c0001t0021g0145 a0002c0002t0004g0077 a0002c0002t0004g0094 a0004c0004t0002g0180 a0004c0004t0002g0195	8	34	0.2353	12	c.454 others(31): Show c.454-34486_454-34475dupCACACACACACA	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG10_chr5_81967023_82261133	82254899	A A	AGTGTGTG others(5): Show AGTGTGTGTGTGT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01099.hp1 HG03453.hp1 HG01099.hp1 HG03453.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0015 a0002c0002t0015	a0002c0002t0015g0057 a0002c0002t0015g0210 a0002c0002t0015g0057 a0002c0002t0015g0210	2	55	0.0364	12	c.84 others(21): Show c.847_*858dupGTGTGTGTGTGT	ATG10	ENSG00000152348.16	transcript	ENST00000282185.8	protein_coding	8/8	1497	INFO_REALIGN_3_PRIME	chr5	TogoVar
ATG12_chr5_115823200_115846565	115845836	C C	CAAAAAAA others(5): Show CAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG03139.hp1 NA18906.hp1 HG01243.hp2 HG03139.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0042 a0001c0001t0004g0011 a0001c0001t0004g0072 a0001c0001t0001g0042 a0001c0001t0004g0011 a0001c0001t0004g0072	3	76	0.0395	12	c.-42 others(23): Show c.-4296_-4285dupTTTTTTTTTTTT	ATG12	ENSG00000145782.13	transcript	ENST00000509910.2	protein_coding		4272		chr5	TogoVar
ATG13_chr11_46612553_46679518	46622076	C C	CATATATA others(5): Show CATATATATATAT	intron_variant intron_variant	MODIFIER	HG03017.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0103 a0001c0001t0003g0103	1	23	0.0435	12	c.-70 others(29): Show c.-70+4227_-70+4238dupATATATATATAT	ATG13	ENSG00000175224.17	transcript	ENST00000683050.1	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr11	TogoVar
ATG14_chr14_55361391_55416830	55402924	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG02109.hp1 NA18993.hp2 HG02109.hp1 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0002 a0001c0001t0006 a0001c0002t0002	a0001c0001t0006g0178 a0001c0002t0002g0056 a0001c0001t0006g0178 a0001c0002t0002g0056	2	306	0.0065	12	c.222 others(29): Show c.222-5491_222-5490insATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402926	A A	AAAATATA others(5): Show AAAATATATATAT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0109 a0001c0004t0002g0109	1	190	0.0053	12	c.222 others(29): Show c.222-5493_222-5492insATATATATATTT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG14_chr14_55361391_55416830	55402926	A A	AATATATA others(5): Show AATATATATATAT	intron_variant intron_variant	MODIFIER	HG02647.hp1 NA18612.hp1 NA19070.hp2 HG02647.hp1 NA18612.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0119 a0001c0001t0001g0284 a0001c0001t0002g0017 a0001c0001t0001g0119 a0001c0001t0001g0284 a0001c0001t0002g0017	3	192	0.0156	12	c.222 others(29): Show c.222-5504_222-5493dupATATATATATAT	ATG14	ENSG00000126775.9	transcript	ENST00000247178.6	protein_coding	1/9			chr14	TogoVar
ATG16L1_chr2_233246673_233300669	233289377	A A	ATGTGTGT others(5): Show ATGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01256.hp1 HG01884.hp2 others(5): Show HG00735.hp1 HG01256.hp1 HG01884.hp2 HG01978.hp2 HG03209.hp1 HG03491.hp2 NA18963.hp2 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0005 a0002c0002t0002 a0002c0002t0005	a0002c0002t0002g0029 a0002c0002t0002g0186 a0002c0002t0002g0203 others(5): Show a0002c0002t0002g0029 a0002c0002t0002g0186 a0002c0002t0002g0203 a0002c0002t0002g0207 a0002c0002t0002g0210 a0002c0002t0002g0214 a0002c0002t0002g0219 a0002c0002t0005g0029	8	182	0.0440	12	c.120 others(29): Show c.1204-456_1204-445dupTGTGTGTGTGTG	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr2	TogoVar
ATG16L1_chr2_233246673_233300669	233289408	T T	TGTGAGAG others(5): Show TGTGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03540.hp1 HG01109.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0166 a0001c0001t0003g0167 a0001c0001t0003g0166 a0001c0001t0003g0167	2	282	0.0071	12	c.120 others(29): Show c.1204-445_1204-444insTGAGAGAGAGAG	ATG16L1	ENSG00000085978.22	transcript	ENST00000392017.9	protein_coding	12/17		INFO_REALIGN_3_PRIME	chr2	TogoVar

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