Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LASP1_chr17_38865058_38926770	38900380	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02083.hp1 HG00642.hp2 HG02083.hp1	a0001 a0001	a0001c0003 a0001c0008 a0001c0003 a0001c0008	a0001c0003t0001 a0001c0008t0002 a0001c0003t0001 a0001c0008t0002	a0001c0003t0001g0117 a0001c0008t0002g0176 a0001c0003t0001g0117 a0001c0008t0002g0176	2	396	0.0051	13	c.357 others(30): Show c.357+1872_357+1873insAAAAAAAAAAAAA	LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
LASP1_chr17_38865058_38926770	38910733	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01070.hp1 HG01169.hp1 others(11): Show HG00280.hp2 HG01070.hp1 HG01169.hp1 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG02083.hp2 HG02145.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp1 NA18962.hp1 NA19074.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0008 a0001c0001 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0004t0002 a0001c0008t0002	a0001c0001t0001g0140 a0001c0001t0001g0335 a0001c0001t0002g0353 others(11): Show a0001c0001t0001g0140 a0001c0001t0001g0335 a0001c0001t0002g0353 a0001c0001t0003g0372 a0001c0001t0004g0278 a0001c0001t0009g0097 a0001c0001t0009g0107 a0001c0001t0009g0323 a0001c0001t0010g0100 a0001c0001t0014g0269 a0001c0004t0002g0376 a0001c0008t0002g0045 a0001c0008t0002g0049 a0001c0008t0002g0069	14	396	0.0354	13	c.358 others(30): Show c.358-3584_358-3583insTTTTTTTTTTTTT	LASP1	ENSG00000002834.19	transcript	ENST00000318008.11	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
LATS1_chr6_149653153_149723101	149706183	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18967.hp2 NA18967.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0103 a0001c0002t0002g0103	1	272	0.0037	13	c.-14 others(32): Show c.-140-3930_-140-3918dupTTTTTTTTTTTTT	LATS1	ENSG00000131023.13	transcript	ENST00000543571.6	protein_coding	1/7			chr6	TogoVar
LATS2_chr13_20968036_21066586	20969898	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp2 NA18991.hp2 NA18999.hp2 others(4): Show HG00597.hp2 NA18991.hp2 NA18999.hp2 NA19011.hp1 NA19012.hp2 NA19058.hp2 NA19079.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0004 a0002c0006t0004	a0002c0006t0004g0012 a0002c0006t0004g0019 a0002c0006t0004g0164 others(4): Show a0002c0006t0004g0012 a0002c0006t0004g0019 a0002c0006t0004g0164 a0002c0006t0004g0210 a0002c0006t0004g0212 a0002c0006t0004g0213 a0002c0006t0004g0219	7	316	0.0222	13	c.49 others(24): Show c.4971_*4972insTTTTTTTTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3137		chr13	TogoVar
LATS2_chr13_20968036_21066586	20990461	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02647.hp1 HG02572.hp1 HG02647.hp1	a0010 a0010	a0010c0018 a0010c0018	a0010c0018t0010 a0010c0018t0010	a0010c0018t0010g0065 a0010c0018t0010g0066 a0010c0018t0010g0065 a0010c0018t0010g0066	2	316	0.0063	13	c.475 others(28): Show c.475+798_475+810dupAAAAAAAAAAAAA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	3/7			chr13	TogoVar
LATS2_chr13_20968036_21066586	21007573	A A	ATATATAT others(6): Show ATATATATATATAG	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0195 a0001c0001t0006g0195	1	316	0.0032	13	c.343 others(32): Show c.343-16170_343-16169insCTATATATATATA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LATS2_chr13_20968036_21066586	21007630	A A	ATATATAT others(6): Show ATATATATATAGTG	intron_variant intron_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0163 a0001c0001t0010g0163	1	316	0.0032	13	c.343 others(32): Show c.343-16227_343-16226insCACTATATATATA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LATS2_chr13_20968036_21066586	21007632	A A	ATATATAT others(6): Show ATATATATAGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01358.hp2 HG02280.hp2 others(5): Show HG00639.hp2 HG01358.hp2 HG02280.hp2 NA18942.hp1 NA18970.hp1 NA18983.hp1 NA18983.hp2 NA18998.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0007 a0004c0004 a0001c0001 a0003c0007 a0004c0004	a0001c0001t0001 a0001c0001t0010 a0001c0001t0013 others(3): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0013 a0001c0001t0043 a0003c0007t0036 a0004c0004t0005	a0001c0001t0001g0197 a0001c0001t0001g0245 a0001c0001t0001g0280 others(5): Show a0001c0001t0001g0197 a0001c0001t0001g0245 a0001c0001t0001g0280 a0001c0001t0010g0112 a0001c0001t0013g0167 a0001c0001t0043g0139 a0003c0007t0036g0051 a0004c0004t0005g0257	8	316	0.0253	13	c.343 others(32): Show c.343-16229_343-16228insCACACTATATATA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LATS2_chr13_20968036_21066586	21007738	A A	ATATATAT others(6): Show ATATATATATATAG	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0002 a0003c0005t0002	a0003c0005t0002g0050 a0003c0005t0002g0050	1	316	0.0032	13	c.343 others(32): Show c.343-16335_343-16334insCTATATATATATA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LATS2_chr13_20968036_21066586	21040376	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0005 a0005	a0005c0016 a0005c0016	a0005c0016t0014 a0005c0016t0014	a0005c0016t0014g0035 a0005c0016t0014g0035	1	316	0.0032	13	c.342 others(30): Show c.342+5296_342+5308dupTTTTTTTTTTTTT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LAX1_chr1_203760183_203781372	203769397	A A	AGAAAGAA others(6): Show AGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0002 a0001c0007t0002	a0001c0007t0002g0117 a0001c0007t0002g0117	1	422	0.0024	13	c.90- others(28): Show c.90-1431_90-1430insGAAAGAAAGAAAG	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4			chr1	TogoVar
LAX1_chr1_203760183_203781372	203770454	A A	AGAGAGAG others(6): Show AGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA19074.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0181	1	422	0.0024	13	c.90- others(26): Show c.90-374_90-373insGAGAGAGAGAGAG	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4			chr1	TogoVar
LAX1_chr1_203760183_203781372	203770457	G G	GAGAGAGA others(6): Show GAGAGAGAGAGAGA	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02451.hp2 HG03704.hp1 others(1): Show HG02145.hp1 HG02451.hp2 HG03704.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0003 a0001c0001t0007	a0001c0001t0003g0316 a0001c0001t0003g0345 a0001c0001t0007g0325 others(1): Show a0001c0001t0003g0316 a0001c0001t0003g0345 a0001c0001t0007g0325 a0001c0001t0007g0330	4	422	0.0095	13	c.90- others(26): Show c.90-371_90-370insAGAGAGAGAGAGA	LAX1	ENSG00000122188.13	transcript	ENST00000442561.7	protein_coding	1/4			chr1	TogoVar
LBHD2_chr14_103079210_103095027	103083514	A A	AGGGGTGA others(6): Show AGGGGTGACCCCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02273.hp2 HG02273.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	432	0.0023	13	c.-87 others(22): Show c.-871_-870insGGGGTGACCCCCT	LBHD2	ENSG00000283071.1	transcript	ENST00000634353.1	protein_coding		695		chr14	TogoVar
LCA5L_chr21_39400728_39450778	39428599	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01081.hp1 HG02109.hp2 others(5): Show HG01074.hp1 HG01081.hp1 HG02109.hp2 HG02809.hp1 HG03130.hp1 HG03579.hp2 NA19030.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0134 a0002c0002t0002g0236 a0002c0002t0002g0238 others(5): Show a0001c0001t0001g0134 a0002c0002t0002g0236 a0002c0002t0002g0238 a0002c0002t0002g0249 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0274 a0002c0002t0002g0281	8	340	0.0235	13	c.-10 others(26): Show c.-10-97_-10-96insTATATATATATAT	LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	4/10			chr21	TogoVar
LCA5_chr6_79479991_79542430	79538018	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 NA18970.hp2 NA18987.hp2 others(2): Show HG00438.hp1 NA18970.hp2 NA18987.hp2 NA19057.hp1 NA19078.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0003c0003t0004 a0001c0001t0002 a0003c0003t0004	a0001c0001t0002g0006 a0001c0001t0002g0177 a0003c0003t0004g0005 others(2): Show a0001c0001t0002g0006 a0001c0001t0002g0177 a0003c0003t0004g0005 a0003c0003t0004g0021 a0003c0003t0004g0101	5	400	0.0125	13	c.-10 others(24): Show c.-1046_-1045insAAAAAAAAAAAAA	LCA5	ENSG00000135338.14	transcript	ENST00000369846.9	protein_coding		589		chr6	TogoVar
LCE6A_chr1_152837856_152848983	152842462	C C	CGGAATGG others(6): Show CGGAATGGGATGCT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	400	0.0025	13	c.-57 others(22): Show c.-571_-570insGGAATGGGATGCT	LCE6A	ENSG00000235942.3	transcript	ENST00000431011.3	protein_coding		393		chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30521489	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19005.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0116 a0001c0001t0005g0116	1	366	0.0027	13	c.-4- others(28): Show c.-4-4096_-4-4095insTTTTTTTTTTTTT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30602735	T T	TGGTGTAA others(6): Show TGGTGTAAAGTTTA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00438.hp1 others(126): Show HG00280.hp1 HG00408.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp1 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01516.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02148.hp1 HG02155.hp2 HG02258.hp1 HG02486.hp1 HG02523.hp1 HG02602.hp1 HG02897.hp2 HG03491.hp1 HG03492.hp2 HG03831.hp2 HG03927.hp2 HG04184.hp1 HG04199.hp2 HG04228.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18945.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19056.hp1 NA19057.hp2 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19068.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19091.hp1 NA19091.hp2 NA20905.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0001c0008 a0002c0002 others(2): Show a0001c0001 a0001c0008 a0002c0002 a0003c0004 a0005c0006	a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 others(19): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 a0001c0001t0013 a0001c0001t0028 a0001c0001t0029 a0001c0001t0050 a0001c0001t0051 a0001c0001t0052 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0068 a0001c0008t0067 a0002c0002t0025 a0003c0004t0001 a0005c0006t0042	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0129 others(126): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0232 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0314 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0333 a0001c0001t0001g0343 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0005g0120 a0001c0001t0011g0323 a0001c0001t0011g0324 a0001c0001t0011g0325 a0001c0001t0011g0326 a0001c0001t0011g0327 a0001c0001t0011g0332 a0001c0001t0013g0185 a0001c0001t0013g0198 a0001c0001t0013g0199 a0001c0001t0013g0296 a0001c0001t0028g0305 a0001c0001t0028g0306 a0001c0001t0029g0142 a0001c0001t0029g0313 a0001c0001t0050g0156 a0001c0001t0051g0183 a0001c0001t0052g0204 a0001c0001t0053g0334 a0001c0001t0054g0197 a0001c0001t0055g0153 a0001c0001t0056g0307 a0001c0001t0057g0321 a0001c0001t0058g0299 a0001c0001t0059g0131 a0001c0001t0060g0200 a0001c0001t0068g0322 a0001c0008t0067g0205 a0002c0002t0025g0038 a0002c0002t0025g0057 a0003c0004t0001g0178 a0003c0004t0001g0315 a0005c0006t0042g0069	129	366	0.3525	13	c.628 others(32): Show c.628+34560_628+34572dupGGTGTAAAGTTTA	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30604628	C C	CTCCAGCT others(6): Show CTCCAGCTTGGCGA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03225.hp1 NA20300.hp2 HG02622.hp1 HG03225.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0026 a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0026	3	366	0.0082	13	c.629 others(32): Show c.629-35488_629-35476dupTCCAGCTTGGCGA	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCMT1_chr16_25106742_25183228	25132858	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp2 HG02965.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0014 a0001c0001t0001g0019	2	348	0.0058	13	c.327 others(28): Show c.327+340_327+352dupTTTTTTTTTTTTT	LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr16	TogoVar
LCMT1_chr16_25106742_25183228	25179975	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG03579.hp2 NA19043.hp1 others(1): Show HG02615.hp2 HG03579.hp2 NA19043.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0200 a0001c0001t0001g0298 others(1): Show a0001c0001t0001g0025 a0001c0001t0001g0200 a0001c0001t0001g0298 a0001c0001t0001g0302	4	348	0.0115	13	c.19 others(24): Show c.1952_*1953insAAAAAAAAAAAAA	LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding		1748		chr16	TogoVar
LCMT2_chr15_43318649_43335573	43334633	T T	TATATATA others(6): Show TATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0000 a0001c0001t0036g0000	1	410	0.0024	13	c.-41 others(24): Show c.-4145_-4144insTATATATATATAT	LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding		4061		chr15	TogoVar
LCMT2_chr15_43318649_43335573	43334641	A A	ATATATAT others(6): Show ATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0000 a0001c0002t0005g0000	1	410	0.0024	13	c.-41 others(24): Show c.-4165_-4153dupATATATATATATA	LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding		4069		chr15	TogoVar
LCN12_chr9_136947273_136960497	136957884	C C	CTTTTGGC others(6): Show CTTTTGGCAGAAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0009	1	382	0.0026	13	c.24 others(24): Show c.2485_*2486insTTTTGGCAGAAAG	LCN12	ENSG00000184925.12	transcript	ENST00000371633.8	protein_coding		2388		chr9	TogoVar
LCOR_chr10_96827298_97000956	96832117	G G	GGGTGAGC others(6): Show GGGTGAGCGGGCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	288	0.0035	13	c.-68 others(22): Show c.-686_-685insGGTGAGCGGGCCC	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding		180		chr10	TogoVar
LCOR_chr10_96827298_97000956	96888363	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG04115.hp2 NA18943.hp2 others(1): Show HG02630.hp1 HG04115.hp2 NA18943.hp2 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0065 a0001c0001t0072 a0001c0004t0002 others(1): Show a0001c0001t0065 a0001c0001t0072 a0001c0004t0002 a0001c0004t0007	a0001c0001t0065g0148 a0001c0001t0072g0135 a0001c0004t0002g0157 others(1): Show a0001c0001t0065g0148 a0001c0001t0072g0135 a0001c0004t0002g0157 a0001c0004t0007g0158	4	288	0.0139	13	c.-32 others(34): Show c.-329-18886_-329-18874dupAAAAAAAAAAAAA	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(6): Show ATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18942.hp1 NA18953.hp1 NA19060.hp1 others(1): Show NA18942.hp1 NA18953.hp1 NA19060.hp1 NA19067.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0033 a0002c0002t0128 a0002c0002t0129 a0002c0002t0033 a0002c0002t0128 a0002c0002t0129	a0002c0002t0033g0080 a0002c0002t0033g0112 a0002c0002t0128g0087 others(1): Show a0002c0002t0033g0080 a0002c0002t0033g0112 a0002c0002t0128g0087 a0002c0002t0129g0070	4	288	0.0139	13	c.45 others(24): Show c.4562_*4563insATATATATATATT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(6): Show ATATATATATATTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18984.hp1 NA19012.hp2 NA18984.hp1 NA19012.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0131 a0002c0002t0137 a0002c0002t0131 a0002c0002t0137	a0002c0002t0131g0103 a0002c0002t0137g0097 a0002c0002t0131g0103 a0002c0002t0137g0097	2	288	0.0069	13	c.45 others(24): Show c.4562_*4563insATATATATATTTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(6): Show ATATATATATTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02723.hp2 HG03017.hp2 HG03834.hp1 others(1): Show HG02723.hp2 HG03017.hp2 HG03834.hp1 HG04199.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0020 a0002c0002t0061 a0002c0002t0020 a0002c0002t0061	a0002c0002t0020g0090 a0002c0002t0020g0091 a0002c0002t0020g0116 others(1): Show a0002c0002t0020g0090 a0002c0002t0020g0091 a0002c0002t0020g0116 a0002c0002t0061g0118	4	288	0.0139	13	c.45 others(24): Show c.4562_*4563insATATATATTTTTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(6): Show ATATATATTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0135 a0002c0002t0135	a0002c0002t0135g0082 a0002c0002t0135g0082	1	288	0.0035	13	c.45 others(24): Show c.4562_*4563insATATATTTTTTTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989696	T T	TATATATA others(6): Show TATATATATATATA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18970.hp2 NA18970.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0124 a0002c0002t0124	a0002c0002t0124g0085 a0002c0002t0124g0085	1	288	0.0035	13	c.45 others(24): Show c.4562_*4563insATATATATATATA	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563		chr10	TogoVar
LCP2_chr5_170241233_170302777	170272597	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01928.hp1 HG02165.hp2 others(9): Show HG01361.hp1 HG01928.hp1 HG02165.hp2 NA18612.hp1 NA18945.hp2 NA18952.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18988.hp1 NA19043.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0005 a0001c0001t0014 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0014 a0001c0002t0007 a0001c0003t0002 a0001c0003t0004	a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0001t0001g0362 others(9): Show a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0001t0001g0362 a0001c0001t0005g0057 a0001c0001t0014g0003 a0001c0002t0007g0341 a0001c0003t0002g0131 a0001c0003t0002g0193 a0001c0003t0004g0019 a0001c0003t0004g0025 a0001c0003t0004g0032 a0001c0003t0004g0085	12	384	0.0313	13	c.324 others(30): Show c.324+1691_325-1681dupAAAAAAAAAAAAA	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	6/20			chr5	TogoVar
LCP2_chr5_170241233_170302777	170290952	A A	AAAAGAAA others(6): Show AAAAGAAAGAAAGG	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0282 a0001c0002t0001g0282	1	384	0.0026	13	c.141 others(30): Show c.141+2357_141+2358insCCTTTCTTTCTTT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	2/20			chr5	TogoVar
LCTL_chr15_66542532_66570998	66544719	G G	GTGTGTGT others(6): Show GTGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp2 NA19005.hp1 NA18941.hp2 NA19005.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0214 a0002c0002t0001g0215 a0002c0002t0001g0214 a0002c0002t0001g0215	2	434	0.0046	13	c.37 others(24): Show c.3770_*3771insACACACACACACA	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2812		chr15	TogoVar
LCTL_chr15_66542532_66570998	66544724	T T	TGTGTGTG others(6): Show TGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG01496.hp2 HG01891.hp1 others(15): Show HG01081.hp2 HG01496.hp2 HG01891.hp1 HG01943.hp1 HG02148.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp2 HG02717.hp2 HG02818.hp2 HG02896.hp2 HG02965.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03516.hp1 HG03704.hp1 HG04199.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 a0001c0001t0001 a0001c0001t0009 a0002c0002t0001	a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0044 others(10): Show a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0088 a0001c0001t0001g0142 a0001c0001t0001g0175 a0001c0001t0001g0194 a0001c0001t0009g0174 a0002c0002t0001g0209	18	434	0.0415	13	c.37 others(24): Show c.3765_*3766insCACACACACACAC	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2807		chr15	TogoVar
LCT_chr2_135782850_135842184	135785690	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0005 a0005	a0005c0017 a0005c0017	a0005c0017t0001 a0005c0017t0001	a0005c0017t0001g0018 a0005c0017t0001g0018	1	366	0.0027	13	c.26 others(24): Show c.2633_*2634insAAAAAAAAAAAAA	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding		2159		chr2	TogoVar
LCT_chr2_135782850_135842184	135834787	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0011 a0011	a0011c0028 a0011c0028	a0011c0028t0002 a0011c0028t0002	a0011c0028t0002g0198 a0011c0028t0002g0198	1	366	0.0027	13	c.641 others(30): Show c.641-1610_641-1598dupTTTTTTTTTTTTT	LCT	ENSG00000115850.10	transcript	ENST00000264162.7	protein_coding	1/16			chr2	TogoVar
LDAF1_chr16_21153674_21185616	21167696	G G	GTTTTTCT others(6): Show GTTTTTCTTTTTTT	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0094 a0001c0001t0002g0094	1	390	0.0026	13	c.97- others(28): Show c.97-2736_97-2735insCTTTTTTTTTTTT	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
LDAF1_chr16_21153674_21185616	21167696	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00323.hp1 others(61): Show HG00099.hp1 HG00280.hp2 HG00323.hp1 HG00544.hp2 HG00639.hp2 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00741.hp2 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01516.hp2 HG01993.hp2 HG02273.hp2 HG02602.hp1 HG02602.hp2 HG02683.hp1 HG02717.hp1 HG02738.hp1 HG03239.hp1 HG03453.hp2 HG03654.hp2 HG03704.hp1 HG04115.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp1 NA18942.hp1 NA18954.hp1 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18966.hp2 NA18981.hp2 NA18986.hp1 NA18989.hp2 NA19006.hp1 NA19010.hp1 NA19054.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19080.hp2 NA19082.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp2 NA20752.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0002 a0001c0001 a0001c0006 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0006t0013 a0002c0002t0004 a0002c0002t0012	a0001c0001t0001g0020 a0001c0001t0001g0027 a0001c0001t0001g0035 others(27): Show a0001c0001t0001g0020 a0001c0001t0001g0027 a0001c0001t0001g0035 a0001c0001t0001g0065 a0001c0001t0002g0004 a0001c0001t0002g0011 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0020 a0001c0001t0002g0027 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0003g0004 a0001c0001t0003g0017 a0001c0001t0006g0004 a0001c0006t0013g0067 a0002c0002t0004g0006 a0002c0002t0004g0029 a0002c0002t0004g0063 a0002c0002t0004g0064 a0002c0002t0004g0066 a0002c0002t0004g0073 a0002c0002t0004g0074 a0002c0002t0004g0076 a0002c0002t0012g0006	64	390	0.1641	13	c.97- others(28): Show c.97-2740_97-2728dupTTTTTTTTTTTTT	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr16	TogoVar
LDAH_chr2_20679031_20828101	20697122	T T	TGCATGTC others(6): Show TGCATGTCCCACTG	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0236 a0001c0001t0001g0236	1	258	0.0039	13	c.786 others(30): Show c.786+4435_786+4447dupCAGTGGGACATGC	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding	6/6			chr2	TogoVar
LDB2_chr4_16496541_16903645	16582000	G G	GGGAAGGA others(6): Show GGGAAGGAAGGGAA	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA18522.hp2 NA20129.hp2 HG02258.hp1 NA18522.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0003t0001 a0001c0001t0001 a0001c0001t0003 a0001c0003t0001	a0001c0001t0001g0046 a0001c0001t0003g0028 a0001c0003t0001g0097 a0001c0001t0001g0046 a0001c0001t0003g0028 a0001c0003t0001g0097	3	162	0.0185	13	c.615 others(30): Show c.615+3921_615+3922insTTCCCTTCCTTCC	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	5/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16655896	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03453.hp1 HG03195.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0149 a0001c0001t0001g0032 a0001c0001t0001g0149	2	162	0.0124	13	c.236 others(32): Show c.236-60034_236-60022dupAAAAAAAAAAAAA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16773998	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02615.hp1 HG02647.hp1 others(1): Show HG01243.hp2 HG02615.hp1 HG02647.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0034 a0001c0001t0001g0148 a0001c0001t0001g0154 others(1): Show a0001c0001t0001g0034 a0001c0001t0001g0148 a0001c0001t0001g0154 a0001c0001t0005g0144	4	162	0.0247	13	c.133 others(32): Show c.133-14739_133-14738insTTTTTTTTTTTTT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16791556	G G	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(47): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01081.hp2 HG01109.hp1 HG01169.hp1 HG01169.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp2 HG01258.hp1 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG02015.hp1 HG02083.hp2 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02602.hp1 HG02602.hp2 HG02809.hp1 HG02818.hp2 HG03195.hp1 HG03516.hp1 HG03579.hp1 HG03831.hp2 HG04115.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18970.hp2 NA18983.hp2 NA18984.hp2 NA19057.hp2 NA19070.hp2 NA19074.hp1 NA19079.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010	a0001c0001t0001g0004 a0001c0001t0001g0025 a0001c0001t0001g0036 others(47): Show a0001c0001t0001g0004 a0001c0001t0001g0025 a0001c0001t0001g0036 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0053 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0073 a0001c0001t0001g0082 a0001c0001t0001g0099 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0147 a0001c0001t0001g0153 a0001c0001t0002g0020 a0001c0001t0002g0043 a0001c0001t0002g0045 a0001c0001t0002g0061 a0001c0001t0002g0064 a0001c0001t0002g0093 a0001c0001t0002g0100 a0001c0001t0002g0112 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0122 a0001c0001t0003g0003 a0001c0001t0003g0023 a0001c0001t0003g0028 a0001c0001t0003g0039 a0001c0001t0003g0091 a0001c0001t0003g0116 a0001c0001t0003g0131 a0001c0001t0003g0152 a0001c0001t0003g0157 a0001c0001t0004g0038 a0001c0001t0004g0062 a0001c0001t0007g0110 a0001c0001t0010g0162	50	162	0.3086	13	c.133 others(32): Show c.133-32309_133-32297dupTTTTTTTTTTTTT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16821746	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG02976.hp1 HG01517.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0003g0127 a0001c0002t0001g0007 a0001c0001t0003g0127 a0001c0002t0001g0007	2	162	0.0124	13	c.133 others(32): Show c.133-62499_133-62487dupTTTTTTTTTTTTT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16898837	G G	GAGAGAGA others(6): Show GAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0040 a0001c0001t0002g0040	1	162	0.0062	13	c.-35 others(22): Show c.-353_-352insTCTCTCTCTCTCT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding		193		chr4	TogoVar
LDB3_chr10_86663511_86705050	86696709	G G	GTTTGTCA others(6): Show GTTTGTCAGTCAGT	intron_variant intron_variant	MODIFIER	HG00423.hp1 NA18983.hp2 HG00423.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0229 a0001c0001t0001g0230	2	412	0.0049	13	c.756 others(30): Show c.756-2569_756-2568insTTTGTCAGTCAGT	LDB3	ENSG00000122367.21	transcript	ENST00000263066.11	protein_coding	8/8			chr10	TogoVar
LDB3_chr10_86663511_86741072	86696709	G G	GTTTGTCA others(6): Show GTTTGTCAGTCAGT	intron_variant intron_variant	MODIFIER	HG00423.hp1 NA18983.hp2 HG00423.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0008 a0001c0001t0002 a0001c0001t0008	a0001c0001t0002g0194 a0001c0001t0008g0193 a0001c0001t0002g0194 a0001c0001t0008g0193	2	332	0.0060	13	c.896 others(30): Show c.896+4138_896+4139insTTTGTCAGTCAGT	LDB3	ENSG00000122367.21	transcript	ENST00000361373.9	protein_coding	7/13			chr10	TogoVar
LDB3_chr10_86663511_86741072	86728581	C C	CTTTTGTT others(6): Show CTTTTGTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02280.hp2 HG02451.hp2 others(7): Show HG00621.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp2 HG02622.hp1 HG02717.hp1 HG03239.hp1 HG03654.hp1 NA18612.hp2 NA18906.hp2	a0001 a0003 a0011 a0001 a0003 a0011	a0001c0001 a0001c0007 a0001c0019 others(2): Show a0001c0001 a0001c0007 a0001c0019 a0003c0003 a0011c0017	a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0011 a0001c0001t0071 a0001c0007t0011 a0001c0019t0003 a0003c0003t0011 a0011c0017t0025	a0001c0001t0002g0183 a0001c0001t0004g0184 a0001c0001t0004g0270 others(7): Show a0001c0001t0002g0183 a0001c0001t0004g0184 a0001c0001t0004g0270 a0001c0001t0011g0152 a0001c0001t0011g0311 a0001c0001t0071g0047 a0001c0007t0011g0155 a0001c0019t0003g0096 a0003c0003t0011g0054 a0011c0017t0025g0040	10	332	0.0301	13	c.209 others(32): Show c.2094+2334_2094+2346dupGTTTTTTTTTTTT	LDB3	ENSG00000122367.21	transcript	ENST00000361373.9	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr10	TogoVar

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