Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LMNTD1_chr12_25471082_25558283	25519586	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA19011.hp1 NA19087.hp1 NA18969.hp1 NA19011.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0187 a0001c0001t0001g0198 a0001c0001t0001g0201 a0001c0001t0001g0187 a0001c0001t0001g0198 a0001c0001t0001g0201	3	388	0.0077	13	c.101 others(30): Show c.1016+271_1016+272insTTTTTTTTTTTTT	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	7/9			chr12	TogoVar
LMNTD1_chr12_25471082_25558283	25519587	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02056.hp1 HG02486.hp1 others(6): Show HG01106.hp1 HG02056.hp1 HG02486.hp1 HG02572.hp2 HG03239.hp1 NA18975.hp1 NA18975.hp2 NA19007.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0002 a0001c0007t0004 a0001c0001t0002 a0001c0007t0004	a0001c0001t0002g0059 a0001c0001t0002g0064 a0001c0001t0002g0080 others(6): Show a0001c0001t0002g0059 a0001c0001t0002g0064 a0001c0001t0002g0080 a0001c0001t0002g0089 a0001c0001t0002g0096 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0104 a0001c0007t0004g0174	9	388	0.0232	13	c.101 others(30): Show c.1016+258_1016+270dupTTTTTTTTTTTTT	LMNTD1	ENSG00000152936.11	transcript	ENST00000458174.7	protein_coding	7/9			chr12	TogoVar
LMO4_chr1_87323880_87353923	87331063	G G	GCCGCCCG others(6): Show GCCGCCCGCCCCCC	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0079 a0001c0001t0037g0079	1	392	0.0026	13	c.-3- others(26): Show c.-3-948_-3-947insGCCCGCCCCCCCC	LMO4	ENSG00000143013.13	transcript	ENST00000370544.10	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LMO7_chr13_75631330_75864866	75632862	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp2 HG03195.hp1 HG01952.hp2 HG03195.hp1	a0002 a0008 a0002 a0008	a0002c0007 a0008c0008 a0002c0007 a0008c0008	a0002c0007t0001 a0008c0008t0002 a0002c0007t0001 a0008c0008t0002	a0002c0007t0001g0129 a0008c0008t0002g0077 a0002c0007t0001g0129 a0008c0008t0002g0077	2	272	0.0074	13	c.-37 others(24): Show c.-3796_-3795insTTTTTTTTTTTTT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding		3467		chr13	TogoVar
LMO7_chr13_75631330_75864866	75663432	C C	CTTTCTTT others(6): Show CTTTCTTTCTTTCT	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0002 a0004c0013t0002	a0004c0013t0002g0061 a0004c0013t0002g0061	1	272	0.0037	13	c.69+ others(30): Show c.69+26709_69+26710insCTTTCTTTCTTTT	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMOD1_chr1_201891456_201951548	201924721	G G	GAAAGAAA others(6): Show GAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0294 a0001c0001t0001g0294	1	400	0.0025	13	c.261 others(32): Show c.261+21358_261+21359insTCTTTCTTTCTTT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding	1/2			chr1	TogoVar
LMOD1_chr1_201891456_201951548	201947181	G G	GAGAGAGA others(6): Show GAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp1 NA19055.hp1 NA18973.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0158 a0001c0001t0001g0027 a0001c0001t0001g0158	2	400	0.0050	13	c.-84 others(22): Show c.-842_-841insTCTCTCTCTCTCT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding		634		chr1	TogoVar
LMOD3_chr3_69101065_69127595	69101316	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp1 HG02135.hp2 HG02523.hp2 others(3): Show HG02056.hp1 HG02135.hp2 HG02523.hp2 NA18972.hp2 NA19079.hp2 NA19082.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0009 a0001c0003t0020 a0001c0003t0037 others(2): Show a0001c0003t0009 a0001c0003t0020 a0001c0003t0037 a0001c0003t0115 a0001c0003t0119	a0001c0003t0009g0002 a0001c0003t0009g0056 a0001c0003t0020g0009 others(3): Show a0001c0003t0009g0002 a0001c0003t0009g0056 a0001c0003t0020g0009 a0001c0003t0037g0055 a0001c0003t0115g0054 a0001c0003t0119g0116	6	428	0.0140	13	c.77 others(24): Show c.7766_*7778dupAAAAAAAAAAAAA	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding		4748		chr3	TogoVar
LMX1A_chr1_165196867_165361715	165247054	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02922.hp2 HG03486.hp1 others(3): Show HG02572.hp2 HG02922.hp2 HG03486.hp1 HG03579.hp1 HG04115.hp1 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0003t0004 others(2): Show a0001c0002t0001 a0001c0003t0001 a0001c0003t0004 a0001c0003t0011 a0001c0003t0020	a0001c0002t0001g0132 a0001c0003t0001g0174 a0001c0003t0004g0033 others(3): Show a0001c0002t0001g0132 a0001c0003t0001g0174 a0001c0003t0004g0033 a0001c0003t0004g0056 a0001c0003t0011g0074 a0001c0003t0020g0219	6	288	0.0208	13	c.496 others(30): Show c.496+2341_496+2353dupAAAAAAAAAAAAA	LMX1A	ENSG00000162761.14	transcript	ENST00000342310.7	protein_coding	4/8			chr1	TogoVar
LMX1B_chr9_126608928_126706032	126682108	T T	TTTTTTTT others(6): Show TTTTTTTTTTTTTA	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02572.hp1 HG02886.hp1 others(2): Show HG01496.hp2 HG02572.hp1 HG02886.hp1 HG03453.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0183 a0001c0004t0042 a0001c0004t0064 others(2): Show a0001c0001t0183 a0001c0004t0042 a0001c0004t0064 a0001c0004t0146 a0001c0004t0151	a0001c0001t0183g0154 a0001c0004t0042g0209 a0001c0004t0064g0082 others(2): Show a0001c0001t0183g0154 a0001c0004t0042g0209 a0001c0004t0064g0082 a0001c0004t0146g0213 a0001c0004t0151g0065	5	342	0.0146	13	c.327 others(30): Show c.327-8728_327-8727insTTTTTTTTTTTTA	LMX1B	ENSG00000136944.19	transcript	ENST00000373474.9	protein_coding	2/7			chr9	TogoVar
LNPEP_chr5_96931080_97042513	96954772	A A	ATATATTT others(6): Show ATATATTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19080.hp2 NA19080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0088 a0001c0001t0002g0088	1	352	0.0028	13	c.19+ others(30): Show c.19+18599_19+18600insATATTTTTTTTTT	LNPEP	ENSG00000113441.16	transcript	ENST00000231368.10	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr5	TogoVar
LNX1_chr4_53454301_53596486	53495548	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02886.hp1 HG03927.hp2 others(1): Show HG02559.hp2 HG02886.hp1 HG03927.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006	a0001c0001t0002g0295 a0001c0001t0002g0299 a0001c0001t0004g0134 others(1): Show a0001c0001t0002g0295 a0001c0001t0002g0299 a0001c0001t0004g0134 a0001c0001t0006g0077	4	356	0.0112	13	c.135 others(30): Show c.1350+462_1350+474dupAAAAAAAAAAAAA	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	6/10			chr4	TogoVar
LNX1_chr4_53454301_53596486	53506856	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03130.hp2 NA21309.hp2 HG03130.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0118 a0001c0001t0009g0124 a0001c0001t0009g0118 a0001c0001t0009g0124	2	356	0.0056	13	c.775 others(28): Show c.775+448_775+460dupTTTTTTTTTTTTT	LNX1	ENSG00000072201.14	transcript	ENST00000263925.8	protein_coding	4/10			chr4	TogoVar
LNX2_chr13_27540913_27625529	27588021	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0026 a0001c0001t0008g0026	1	358	0.0028	13	c.-10 others(32): Show c.-100-6231_-100-6219dupTTTTTTTTTTTTT	LNX2	ENSG00000139517.9	transcript	ENST00000316334.5	protein_coding	1/9			chr13	TogoVar
LOC102723971_chr9_135609183_135624893	135619568	A A	AAGTGAGC others(6): Show AAGTGAGCCCAGCT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0066 a0001c0001t0023g0066	1	450	0.0022	13	c.61 others(22): Show c.617_*629dupAGTGAGCCCAGCT	LOC102723971	ENSG00000236543.3	transcript	ENST00000430816.3	protein_coding	6/6	630	INFO_REALIGN_3_PRIME	chr9	TogoVar
LOC102723971_chr9_135609183_135624893	135621369	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	450	0.0022	13	c.24 others(24): Show c.2417_*2418insAAAAAAAAAAAAA	LOC102723971	ENSG00000236543.3	transcript	ENST00000430816.3	protein_coding		1477		chr9	TogoVar
LOC114841035_chr11_64236095_64249132	64237123	G G	GAGAGAGA others(6): Show GAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	330	0.0030	13	c.-41 others(24): Show c.-4157_-4156insAGAGAGAGAGAGA	LOC114841035	ENSG00000286264.2	transcript	ENST00000652762.2	protein_coding		3971		chr11	TogoVar
LOC114841035_chr11_64236095_64249132	64246190	G G	GTACTACA others(6): Show GTACTACACCCACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	330	0.0030	13	c.27 others(24): Show c.2730_*2731insTACTACACCCACA	LOC114841035	ENSG00000286264.2	transcript	ENST00000652762.2	protein_coding		2059		chr11	TogoVar
LOC122319436_chr2_222309148_222325155	222323432	A A	ATATATAT others(6): Show ATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0057 a0001c0001t0057	a0001c0001t0057g0000 a0001c0001t0057g0000	1	440	0.0023	13	c.-33 others(24): Show c.-3368_-3367insATATATATATATA	LOC122319436	ENSG00000288658.2	transcript	ENST00000678139.2	protein_coding		3278		chr2	TogoVar
LOC122319436_chr2_222309148_222325155	222323434	A A	AAATATAT others(6): Show AAATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 NA19091.hp2 HG02809.hp1 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0061 a0001c0001t0001 a0001c0001t0061	a0001c0001t0001g0000 a0001c0001t0061g0000 a0001c0001t0001g0000 a0001c0001t0061g0000	2	440	0.0046	13	c.-33 others(24): Show c.-3370_-3369insATATATATATATT	LOC122319436	ENSG00000288658.2	transcript	ENST00000678139.2	protein_coding		3280		chr2	TogoVar
LOC122319436_chr2_222309148_222325155	222323434	A A	ATATATAT others(6): Show ATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0039 a0003c0005t0039	a0003c0005t0039g0000 a0003c0005t0039g0000	1	440	0.0023	13	c.-33 others(24): Show c.-3370_-3369insATATATATATATA	LOC122319436	ENSG00000288658.2	transcript	ENST00000678139.2	protein_coding		3280		chr2	TogoVar
LOC122455340_chr12_53236900_53247722	53238278	T T	TCCCAAAG others(6): Show TCCCAAAGTGCTGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	1	408	0.0025	13	c.-36 others(24): Show c.-3645_-3644insCCCAAAGTGCTGG	LOC122455340	ENSG00000283536.3	transcript	ENST00000635789.2	protein_coding		3621		chr12	TogoVar
LOC122539214_chr19_52645447_52695496	52681280	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp1 HG01123.hp1 others(4): Show HG00642.hp2 HG00735.hp1 HG01123.hp1 HG01361.hp2 NA18941.hp2 NA18944.hp2 NA19011.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0011 a0001c0001t0001 a0001c0001t0010 a0001c0001t0011	a0001c0001t0001g0060 a0001c0001t0001g0089 a0001c0001t0001g0323 others(3): Show a0001c0001t0001g0060 a0001c0001t0001g0089 a0001c0001t0001g0323 a0001c0001t0010g0017 a0001c0001t0011g0006 a0001c0001t0011g0118	7	452	0.0155	13	c.-20 others(30): Show c.-20+9150_-20+9162dupTTTTTTTTTTTTT	LOC122539214	ENSG00000269825.3	transcript	ENST00000598322.3	protein_coding	1/3			chr19	TogoVar
LOC127933115_chrX_23778278_23788367	23780476	A A	ATATATAT others(6): Show ATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	334	0.0030	13	c.-28 others(24): Show c.-2802_-2801insTATATATATATAT	LOC127933115	ENSG00000288706.1	transcript	ENST00000683890.1	protein_coding		2801		chrX	TogoVar
LOC128031832_chr1_31914563_31924628	31916391	T T	TTAAAACA others(6): Show TTAAAACAATGTAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG01069.hp2 HG01071.hp2 others(1): Show HG00741.hp1 HG01069.hp2 HG01071.hp2 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	4	402	0.0100	13	c.31 others(24): Show c.3171_*3172insGTACATTGTTTTA	LOC128031832	ENSG00000288678.2	transcript	ENST00000679970.1	protein_coding		3171		chr1	TogoVar
LOC128092252_chr15_50643802_50691717	50679538	A A	ATATATAT others(6): Show ATATATATATATTT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0036 a0001c0001t0000g0036	1	388	0.0026	13	c.187 others(30): Show c.187+6992_187+6993insAAATATATATATA	LOC128092252	ENSG00000288645.1	transcript	ENST00000676296.1	protein_coding	1/3			chr15	TogoVar
LOC128092252_chr15_50643802_50691717	50682173	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01975.hp1 HG02145.hp1 others(7): Show HG01192.hp1 HG01975.hp1 HG02145.hp1 HG02559.hp1 HG03041.hp2 HG03491.hp2 HG03492.hp2 HG03579.hp1 HG03669.hp2 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0038 a0001c0001t0000g0039 a0001c0001t0000g0040 others(7): Show a0001c0001t0000g0038 a0001c0001t0000g0039 a0001c0001t0000g0040 a0001c0001t0000g0042 a0001c0001t0000g0207 a0001c0001t0000g0208 a0001c0001t0000g0209 a0001c0001t0000g0215 a0001c0001t0000g0216 a0001c0001t0000g0350	10	388	0.0258	13	c.187 others(30): Show c.187+4345_187+4357dupTTTTTTTTTTTTT	LOC128092252	ENSG00000288645.1	transcript	ENST00000676296.1	protein_coding	1/3			chr15	TogoVar
LOC128462377_chr16_89312046_89423292	89337429	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp2 NA18942.hp1 NA18995.hp2 others(1): Show HG01433.hp2 NA18942.hp1 NA18995.hp2 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0067 a0001c0001t0000g0282 a0001c0001t0000g0341 others(1): Show a0001c0001t0000g0067 a0001c0001t0000g0282 a0001c0001t0000g0341 a0001c0001t0000g0343	4	366	0.0109	13	c.10- others(30): Show c.10-20367_10-20355dupAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89349134	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0155 a0001c0001t0000g0155	1	366	0.0027	13	c.10- others(30): Show c.10-32072_10-32060dupTTTTTTTTTTTTT	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89384879	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00558.hp2 HG02486.hp2 others(11): Show HG00323.hp1 HG00558.hp2 HG02486.hp2 HG02615.hp2 HG02922.hp1 HG03017.hp1 HG03540.hp1 HG03688.hp2 HG04204.hp1 NA18984.hp2 NA18991.hp2 NA19010.hp2 NA19063.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0117 a0001c0001t0000g0232 a0001c0001t0000g0233 others(11): Show a0001c0001t0000g0117 a0001c0001t0000g0232 a0001c0001t0000g0233 a0001c0001t0000g0234 a0001c0001t0000g0243 a0001c0001t0000g0255 a0001c0001t0000g0258 a0001c0001t0000g0264 a0001c0001t0000g0288 a0001c0001t0000g0290 a0001c0001t0000g0307 a0001c0001t0000g0308 a0001c0001t0000g0320 a0001c0001t0000g0334	14	366	0.0383	13	c.9+3 others(28): Show c.9+33392_9+33404dupAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89388293	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01928.hp1 HG03471.hp1 HG01109.hp2 HG01928.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0008 a0001c0001t0000g0094 a0001c0001t0000g0210 a0001c0001t0000g0008 a0001c0001t0000g0094 a0001c0001t0000g0210	3	366	0.0082	13	c.9+2 others(28): Show c.9+29978_9+29990dupAAAAAAAAAAAAA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89415829	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03942.hp2 NA18977.hp2 others(1): Show HG02723.hp1 HG03942.hp2 NA18977.hp2 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0051 a0001c0001t0000g0052 a0001c0001t0000g0053 others(1): Show a0001c0001t0000g0051 a0001c0001t0000g0052 a0001c0001t0000g0053 a0001c0001t0000g0054	4	366	0.0109	13	c.9+2 others(26): Show c.9+2442_9+2454dupTTTTTTTTTTTTT	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128706665_chr20_10408708_10439222	10427021	A A	ACTGACAC others(6): Show ACTGACACACACAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01975.hp2 HG02602.hp1 others(1): Show HG00621.hp2 HG01975.hp2 HG02602.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0055 a0001c0001t0002g0292 a0001c0001t0002g0293 others(1): Show a0001c0001t0001g0055 a0001c0001t0002g0292 a0001c0001t0002g0293 a0001c0001t0002g0311	4	408	0.0098	13	c.-21 others(30): Show c.-21-6264_-21-6263insGTGTGTGTGTCAG	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706665_chr20_10408708_10439222	10427080	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0214 a0001c0001t0001g0214	1	408	0.0025	13	c.-21 others(30): Show c.-21-6323_-21-6322insGTGTGTGTGTGTG	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10427021	A A	ACTGACAC others(6): Show ACTGACACACACAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01975.hp2 HG02602.hp1 others(1): Show HG00621.hp2 HG01975.hp2 HG02602.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0055 a0001c0001t0002g0292 a0001c0001t0002g0293 others(1): Show a0001c0001t0001g0055 a0001c0001t0002g0292 a0001c0001t0002g0293 a0001c0001t0002g0311	4	408	0.0098	13	c.-27 others(32): Show c.-275-6264_-275-6263insGTGTGTGTGTCAG	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10427080	A A	ACACACAC others(6): Show ACACACACACACAC	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0214 a0001c0001t0001g0214	1	408	0.0025	13	c.-27 others(32): Show c.-275-6323_-275-6322insGTGTGTGTGTGTG	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC400499_chr16_11367015_11532247	11369967	A A	ATATGTGT others(6): Show ATATGTGTATATAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG02027.hp1 HG04199.hp2 others(1): Show HG00280.hp2 HG02027.hp1 HG04199.hp2 NA18947.hp2	a0001 a0139 a0217 others(1): Show a0001 a0139 a0217 a0240	a0001c0062 a0139c0141 a0217c0239 others(1): Show a0001c0062 a0139c0141 a0217c0239 a0240c0261	a0001c0062t0004 a0139c0141t0004 a0217c0239t0001 others(1): Show a0001c0062t0004 a0139c0141t0004 a0217c0239t0001 a0240c0261t0003	a0001c0062t0004g0255 a0139c0141t0004g0120 a0217c0239t0001g0236 others(1): Show a0001c0062t0004g0255 a0139c0141t0004g0120 a0217c0239t0001g0236 a0240c0261t0003g0124	4	310	0.0129	13	c.27 others(24): Show c.2766_*2767insATATATACACATA	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding		2047		chr16	TogoVar
LOC400499_chr16_11367015_11532247	11407970	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0157 a0157	a0157c0194 a0157c0194	a0157c0194t0002 a0157c0194t0002	a0157c0194t0002g0031 a0157c0194t0002g0031	1	310	0.0032	13	c.695 others(30): Show c.6955-646_6955-634dupAAAAAAAAAAAAA	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	46/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11443489	A A	AGAGAGAG others(6): Show AGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0067 a0067	a0067c0119 a0067c0119	a0067c0119t0003 a0067c0119t0003	a0067c0119t0003g0011 a0067c0119t0003g0011	1	310	0.0032	13	c.483 others(32): Show c.4837-2414_4837-2413insCTCTCTCTCTCTC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	33/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11443491	A A	AGAGAGAG others(6): Show AGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01496.hp1 others(14): Show HG01167.hp1 HG01169.hp1 HG01496.hp1 HG01943.hp1 HG02129.hp2 HG02155.hp2 HG02615.hp2 HG02809.hp1 HG02922.hp1 HG02976.hp1 HG03041.hp2 HG03239.hp2 HG03491.hp2 NA19005.hp1 NA19043.hp1 NA19085.hp1 NA20905.hp1	a0007 a0017 a0020 others(13): Show a0007 a0017 a0020 a0021 a0033 a0060 a0105 a0143 a0158 a0163 a0180 a0186 a0199 a0225 a0227 a0228	a0007c0004 a0017c0016 a0020c0017 others(13): Show a0007c0004 a0017c0016 a0020c0017 a0021c0015 a0033c0249 a0060c0085 a0105c0089 a0143c0097 a0158c0178 a0163c0229 a0180c0216 a0186c0197 a0199c0176 a0225c0248 a0227c0252 a0228c0253	a0007c0004t0004 a0017c0016t0004 a0020c0017t0003 others(13): Show a0007c0004t0004 a0017c0016t0004 a0020c0017t0003 a0021c0015t0002 a0033c0249t0002 a0060c0085t0006 a0105c0089t0003 a0143c0097t0004 a0158c0178t0006 a0163c0229t0014 a0180c0216t0015 a0186c0197t0004 a0199c0176t0003 a0225c0248t0003 a0227c0252t0005 a0228c0253t0004	a0007c0004t0004g0066 a0017c0016t0004g0214 a0020c0017t0003g0216 others(14): Show a0007c0004t0004g0066 a0017c0016t0004g0214 a0020c0017t0003g0216 a0021c0015t0002g0063 a0021c0015t0002g0064 a0033c0249t0002g0231 a0060c0085t0006g0040 a0105c0089t0003g0248 a0143c0097t0004g0048 a0158c0178t0006g0028 a0163c0229t0014g0308 a0180c0216t0015g0310 a0186c0197t0004g0059 a0199c0176t0003g0027 a0225c0248t0003g0284 a0227c0252t0005g0175 a0228c0253t0004g0264	17	310	0.0548	13	c.483 others(32): Show c.4837-2416_4837-2415insCTCTCTCTCTCTC	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	33/66			chr16	TogoVar
LOC729966_chr19_18245034_18260362	18251681	C C	CCCCCCCG others(6): Show CCCCCCCGCCCCCG	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03492.hp2 HG03831.hp2 others(4): Show HG03491.hp1 HG03492.hp2 HG03831.hp2 NA18977.hp1 NA19001.hp2 NA19002.hp2 NA19063.hp1	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0002c0002 a0010c0009 a0001c0001 a0002c0002 a0010c0009	a0001c0001t0001 a0002c0002t0001 a0010c0009t0002 a0001c0001t0001 a0002c0002t0001 a0010c0009t0002	a0001c0001t0001g0033 a0001c0001t0001g0085 a0002c0002t0001g0039 others(1): Show a0001c0001t0001g0033 a0001c0001t0001g0085 a0002c0002t0001g0039 a0010c0009t0002g0028	7	454	0.0154	13	c.496 others(28): Show c.496+382_496+383insCGGGGGCGGGGGG	LOC729966	ENSG00000284797.2	transcript	ENST00000643046.2	protein_coding	2/3			chr19	TogoVar
LONP1_chr19_5686834_5725146	5715643	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0141 a0001c0001t0001g0141	1	386	0.0026	13	c.430 others(30): Show c.430-1385_430-1373dupTTTTTTTTTTTTT	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17			chr19	TogoVar
LONP2_chr16_48239300_48362349	48354196	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0045 a0001c0002t0045	a0001c0002t0045g0010 a0001c0002t0045g0010	1	154	0.0065	13	c.24 others(24): Show c.2411_*2423dupTTTTTTTTTTTTT	LONP2	ENSG00000102910.14	transcript	ENST00000285737.9	protein_coding	15/15	2424	INFO_REALIGN_3_PRIME	chr16	TogoVar
LONRF3_chrX_118969618_119023355	118979300	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0120 a0001c0002t0001g0120	1	309	0.0032	13	c.936 others(28): Show c.936+848_936+849insTTTTTTTTTTTTT	LONRF3	ENSG00000175556.17	transcript	ENST00000371628.8	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
LOXHD1_chr18_46472273_46662220	46545627	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0022 a0001c0022	a0001c0022t0002 a0001c0022t0002	a0001c0022t0002g0032 a0001c0022t0002g0032	1	270	0.0037	13	c.351 others(30): Show c.3515-219_3515-207dupAAAAAAAAAAAAA	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	22/40			chr18	TogoVar
LOXHD1_chr18_46472273_46662220	46605415	T T	TACTCAGG others(6): Show TACTCAGGAGGCTG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(129): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp2 HG00609.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01109.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp1 HG01346.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG02015.hp1 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02300.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02738.hp2 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp2 HG03704.hp1 HG03834.hp1 HG03927.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18961.hp2 NA18962.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18981.hp2 NA18982.hp2 NA18993.hp1 NA18994.hp1 NA19002.hp1 NA19004.hp2 NA19009.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp1 NA19057.hp2 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19079.hp1 NA19079.hp2 NA19085.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(32): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0021 a0023 a0024 a0025 a0026 a0027 a0028 a0029 a0031 a0034 a0040 a0045 a0047 a0050 a0051 a0056	a0001c0001 a0001c0009 a0001c0022 others(49): Show a0001c0001 a0001c0009 a0001c0022 a0001c0031 a0001c0057 a0002c0002 a0002c0013 a0002c0035 a0002c0054 a0002c0055 a0003c0003 a0003c0025 a0003c0037 a0003c0043 a0003c0058 a0004c0004 a0004c0046 a0004c0052 a0005c0005 a0005c0015 a0006c0006 a0007c0007 a0008c0018 a0008c0019 a0009c0070 a0010c0008 a0011c0011 a0012c0010 a0013c0023 a0013c0072 a0014c0012 a0015c0020 a0016c0021 a0017c0024 a0018c0026 a0019c0016 a0021c0032 a0023c0078 a0024c0038 a0025c0039 a0026c0041 a0027c0040 a0028c0077 a0029c0042 a0031c0047 a0034c0049 a0040c0073 a0045c0065 a0047c0067 a0050c0036 a0051c0045 a0056c0029	a0001c0001t0001 a0001c0001t0002 a0001c0009t0001 others(52): Show a0001c0001t0001 a0001c0001t0002 a0001c0009t0001 a0001c0022t0001 a0001c0031t0001 a0001c0057t0001 a0002c0002t0001 a0002c0013t0001 a0002c0035t0001 a0002c0054t0001 a0002c0055t0001 a0003c0003t0001 a0003c0003t0002 a0003c0025t0001 a0003c0037t0002 a0003c0043t0002 a0003c0058t0001 a0004c0004t0001 a0004c0046t0001 a0004c0052t0001 a0005c0005t0001 a0005c0015t0001 a0006c0006t0001 a0007c0007t0001 a0008c0018t0001 a0008c0019t0001 a0009c0070t0001 a0010c0008t0001 a0011c0011t0001 a0012c0010t0001 a0012c0010t0002 a0013c0023t0001 a0013c0072t0001 a0014c0012t0001 a0015c0020t0001 a0016c0021t0001 a0017c0024t0001 a0018c0026t0001 a0019c0016t0002 a0021c0032t0001 a0023c0078t0001 a0024c0038t0001 a0025c0039t0001 a0026c0041t0001 a0027c0040t0001 a0028c0077t0001 a0029c0042t0001 a0031c0047t0001 a0034c0049t0001 a0040c0073t0001 a0045c0065t0001 a0047c0067t0001 a0050c0036t0001 a0051c0045t0001 a0056c0029t0002	a0001c0001t0001g0040 a0001c0001t0001g0048 a0001c0001t0001g0057 others(127): Show a0001c0001t0001g0040 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0100 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0130 a0001c0001t0001g0164 a0001c0001t0001g0178 a0001c0001t0001g0205 a0001c0001t0001g0214 a0001c0001t0001g0220 a0001c0001t0001g0262 a0001c0001t0002g0017 a0001c0001t0002g0035 a0001c0009t0001g0059 a0001c0009t0001g0081 a0001c0009t0001g0082 a0001c0022t0001g0266 a0001c0031t0001g0053 a0001c0057t0001g0084 a0002c0002t0001g0049 a0002c0002t0001g0072 a0002c0002t0001g0091 a0002c0002t0001g0096 a0002c0002t0001g0098 a0002c0002t0001g0115 a0002c0002t0001g0128 a0002c0002t0001g0129 a0002c0002t0001g0179 a0002c0002t0001g0191 a0002c0002t0001g0225 a0002c0013t0001g0156 a0002c0035t0001g0080 a0002c0054t0001g0180 a0002c0055t0001g0146 a0003c0003t0001g0046 a0003c0003t0001g0050 a0003c0003t0001g0051 a0003c0003t0001g0052 a0003c0003t0001g0054 a0003c0003t0001g0067 a0003c0003t0001g0088 a0003c0003t0001g0093 a0003c0003t0001g0094 a0003c0003t0001g0103 a0003c0003t0001g0105 a0003c0003t0001g0131 a0003c0003t0001g0148 a0003c0003t0001g0202 a0003c0003t0001g0212 a0003c0003t0001g0255 a0003c0003t0002g0015 a0003c0025t0001g0109 a0003c0037t0002g0014 a0003c0043t0002g0016 a0003c0058t0001g0068 a0004c0004t0001g0076 a0004c0004t0001g0095 a0004c0004t0001g0157 a0004c0004t0001g0213 a0004c0004t0001g0218 a0004c0046t0001g0037 a0004c0052t0001g0062 a0005c0005t0001g0086 a0005c0005t0001g0125 a0005c0005t0001g0126 a0005c0005t0001g0127 a0005c0015t0001g0097 a0005c0015t0001g0231 a0006c0006t0001g0149 a0006c0006t0001g0151 a0006c0006t0001g0256 a0007c0007t0001g0099 a0008c0018t0001g0123 a0008c0018t0001g0124 a0008c0019t0001g0108 a0008c0019t0001g0167 a0009c0070t0001g0139 a0010c0008t0001g0002 a0010c0008t0001g0101 a0011c0011t0001g0083 a0011c0011t0001g0170 a0012c0010t0001g0036 a0012c0010t0001g0158 a0012c0010t0002g0013 a0013c0023t0001g0087 a0013c0072t0001g0162 a0014c0012t0001g0066 a0014c0012t0001g0261 a0015c0020t0001g0163 a0015c0020t0001g0172 a0016c0021t0001g0171 a0017c0024t0001g0112 a0017c0024t0001g0113 a0018c0026t0001g0200 a0018c0026t0001g0201 a0019c0016t0002g0001 a0021c0032t0001g0039 a0023c0078t0001g0147 a0024c0038t0001g0045 a0025c0039t0001g0165 a0026c0041t0001g0166 a0027c0040t0001g0159 a0028c0077t0001g0102 a0029c0042t0001g0132 a0031c0047t0001g0142 a0034c0049t0001g0069 a0040c0073t0001g0104 a0045c0065t0001g0058 a0047c0067t0001g0198 a0050c0036t0001g0047 a0051c0045t0001g0150 a0056c0029t0002g0008	132	270	0.4889	13	c.760 others(30): Show c.760-1187_760-1186insCAGCCTCCTGAGT	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	6/40			chr18	TogoVar
LOXL1_chr15_73921462_73957136	73935934	G G	GTGTGTGT others(6): Show GTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0002 a0002c0001t0002	a0002c0001t0002g0207 a0002c0001t0002g0207	1	448	0.0022	13	c.110 others(32): Show c.1103-6920_1103-6919insTGTGTGTGTGTGT	LOXL1	ENSG00000129038.16	transcript	ENST00000261921.8	protein_coding	1/6			chr15	TogoVar
LOXL2_chr8_23291897_23409120	23307953	G G	GGAAAAAA others(6): Show GGAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01978.hp1 HG02896.hp2 others(3): Show HG01243.hp2 HG01978.hp1 HG02896.hp2 NA18939.hp1 NA18995.hp2 NA19079.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0015 a0001c0033 a0002c0036	a0001c0001t0002 a0001c0002t0009 a0001c0005t0003 others(3): Show a0001c0001t0002 a0001c0002t0009 a0001c0005t0003 a0001c0015t0002 a0001c0033t0002 a0002c0036t0003	a0001c0001t0002g0120 a0001c0002t0009g0338 a0001c0005t0003g0237 others(3): Show a0001c0001t0002g0120 a0001c0002t0009g0338 a0001c0005t0003g0237 a0001c0015t0002g0043 a0001c0033t0002g0236 a0002c0036t0003g0136	6	348	0.0172	13	c.188 others(32): Show c.1880+1714_1880+1715insTTTTTTTTTTTTC	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	10/13			chr8	TogoVar
LOXL2_chr8_23291897_23409120	23354950	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG03453.hp1 HG03834.hp2 others(2): Show HG01517.hp1 HG03453.hp1 HG03834.hp2 HG03927.hp1 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 others(2): Show a0001c0001 a0001c0002 a0002c0004 a0002c0022 a0002c0041	a0001c0001t0001 a0001c0002t0003 a0002c0004t0001 others(2): Show a0001c0001t0001 a0001c0002t0003 a0002c0004t0001 a0002c0022t0003 a0002c0041t0001	a0001c0001t0001g0321 a0001c0002t0003g0284 a0002c0004t0001g0291 others(2): Show a0001c0001t0001g0321 a0001c0002t0003g0284 a0002c0004t0001g0291 a0002c0022t0003g0300 a0002c0041t0001g0275	5	348	0.0144	13	c.531 others(30): Show c.531+5139_531+5140insTATATATATATAT	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	3/13			chr8	TogoVar
LPAR4_chrX_78742720_78763714	78747895	T T	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0008 a0001c0001t0020g0008	1	324	0.0031	13	c.-41 others(22): Show c.-415_-403dupAAAAAAAAAAAAA	LPAR4	ENSG00000147145.14	transcript	ENST00000614823.5	protein_coding	1/5	6943	INFO_REALIGN_3_PRIME	chrX	TogoVar

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